Query gi|254780635|ref|YP_003065048.1| hypothetical protein CLIBASIA_02610 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 412 No_of_seqs 152 out of 369 Neff 7.2 Searched_HMMs 23785 Date Tue May 31 18:29:25 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780635.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3pf0_A Imelysin-like protein; 100.0 0 0 382.3 26.2 301 23-404 48-357 (364) 2 3oyv_A Imelysin; outer membran 100.0 1.5E-37 6.2E-42 242.7 19.1 191 194-401 6-215 (361) 3 3oyv_A Imelysin; outer membran 100.0 7.8E-36 3.3E-40 232.3 11.3 150 9-187 209-359 (361) 4 1xou_A ESPA; coiled coil, heli 17.8 36 0.0015 12.3 3.2 32 319-357 118-149 (192) 5 2w9y_A CE-FAR-7, fatty acid/re 16.8 38 0.0016 12.1 6.8 34 324-357 51-84 (140) 6 3iv1_A Tumor susceptibility ge 9.6 63 0.0027 10.8 6.9 60 321-394 1-60 (78) 7 2d1l_A Metastasis suppressor p 7.5 77 0.0032 10.3 4.3 44 25-78 18-61 (253) 8 1luc_B Bacterial luciferase; m 6.4 90 0.0038 9.9 5.7 15 169-183 106-120 (324) 9 2jbw_A Dhpon-hydrolase, 2,6-di 6.1 95 0.004 9.8 5.4 61 41-104 56-116 (386) 10 3fav_B ESAT-6, 6 kDa early sec 6.0 96 0.004 9.7 4.7 65 198-262 6-71 (94) No 1 >3pf0_A Imelysin-like protein; putative metalloendopeptidase, structural genomics, joint CE structural genomics, JCSG; 2.15A {Psychrobacter arcticus} Probab=100.00 E-value=0 Score=382.28 Aligned_cols=301 Identities=14% Similarity=0.218 Sum_probs=246.4 Q ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 6788999988788-6798899999999999999999994--999889999999999999977765654015402210001 Q gi|254780635|r 23 NVSLEKVLQNYAT-IAHAKYEDALMCARTLDSAIETLVT--TPNKKNLENARLQWIRARIPYQQSEVYRFGNKIVDTWDK 99 (412) Q Consensus 23 ~~~~~~vl~~yad-iv~~~Y~d~~~~a~~L~~ai~af~a--~Pt~~~L~aak~aw~~Ar~~we~~E~f~fGpa~~~~~~~ 99 (412) ..+.+.+|+||+| ||+|+|.++..++.+|+.++++||. .|++++|+++|.+|+.+|.+||++|+|+|||+...++.+ T Consensus 48 ~~~~~~~L~~~ad~vIiP~y~~l~~~a~~L~~a~~a~c~~~~p~~~~L~aar~aw~~a~~~Wq~~e~~~fGPa~~~~~~~ 127 (364) T 3pf0_A 48 AETEKTYLTHVANDMVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMVNFGPATASMSNL 127 (364) T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHGGGCSBCHHHHHHHHHHHHHHHHHHHHHTTCCSGGGGGGGHHH T ss_pred HHHHHHHHHHHHCCEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH T ss_conf 22289999997137530369999999999999999985057998899999999999999999998716078566512555 Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHCCHHHHHHHH Q ss_conf 10016576210001123334443333322233336433435522222320397888766641666510211278999986 Q gi|254780635|r 100 KVNAWPLDEGFIDYVDSSYGKENEENNLYTANIIANSKIIVNEKEIDLSIISPDLLRKLHRANGIDTNITTGYHVIEFLL 179 (412) Q Consensus 100 ~in~WPl~~~~iD~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~d~~~it~~~l~~~~e~~~~~~~~~~GfhAiEyLL 179 (412) +|++||++++.|+.......... ..++++.+ ...+++.|||||||||| T Consensus 128 ~i~~wP~~~~~i~~~i~~~~~~~-------------------------~~~~~~~~-------~~~s~~~qGf~ALEyLL 175 (364) T 3pf0_A 128 YINYYPDERGLVHGGVADLITAN-------------------------PALTAEQL-------ANESAVVQGIPGLEEAL 175 (364) T ss_dssp HHCCCCCTTCHHHHHHHHHHHHC-------------------------TTCCTGGG-------GGSCGGGSHHHHHHHHH T ss_pred HCCCCCCCHHHHHHHHHHHHHCC-------------------------CCCCHHHH-------CCCCHHHCCHHHHHHHH T ss_conf 31247774037888999887426-------------------------75685664-------33345741859999997 Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHCCHHHHHHHHHH Q ss_conf 27787776555555303432011334540456799999999999999999995203554--1057762153445999999 Q gi|254780635|r 180 WGQDLKTNVREPGNRPYTDFDIGNCTGGHCRRRVEYLKVVSKILVSDLEEMMKAWGPDG--QATKDLMKDINAGLNSIIT 257 (412) Q Consensus 180 fg~~~~~~~~~~~~r~~~d~~~~~~t~~~~~rr~~YL~ava~~l~~~~~~l~~~W~~~~--~~~~~~~~~~~~~~~~i~~ 257 (412) |+++.. ..+||.||++++.+|+.++.+|...|+++. .+....+.+..+++..+++ T Consensus 176 f~~~~~-----------------------~~~rc~Yl~ava~~l~~~a~~l~~~W~~~~~~~~~~~~~~~~~~al~~l~~ 232 (364) T 3pf0_A 176 YANDSL-----------------------DAGQCAYVMSASSALGTRLKDIEKNWQQNAIKLLAIDKTAESDQGLNQWFN 232 (364) T ss_dssp HSSSSB-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGTTTCCHHHHHHHH T ss_pred CCCCCC-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHH T ss_conf 688755-----------------------067889999999999999999999886274754002444460589999999 Q ss_pred HHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH-HCHH Q ss_conf 9999989876430022423578--843446663527289999999999999503335666543356468999975-1887 Q gi|254780635|r 258 GMTSLSYNELAGERMNLGLILH--DPEQEIDCFSDNTYASYLNDVIGIISSYTGEYIRMNGEKIHGASIHDLISH-NNRN 334 (412) Q Consensus 258 g~~~~~~~Ev~~~Ki~~pl~~~--~pe~~Es~~S~~S~~d~~~Ni~gi~n~y~G~~~~~~g~~~~g~sl~d~l~~-~~~~ 334 (412) +|..+. +++++.|||.|++.. .+...++|||++|+.++.+|+.|++++|.|. ++..++.. .+++ T Consensus 233 ~~i~~~-e~l~~~Klg~Plg~~~~~~~~~~~~~S~~S~~~i~anl~sl~~~y~g~------------~~~~~l~~~~~~~ 299 (364) T 3pf0_A 233 SLLSLV-ETMKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAMTDP------------VLTAILGSNNENT 299 (364) T ss_dssp HHHHHH-HHHHHHTTHHHHTSSSSCCSCCTTTTTTCHHHHHHHHHHHHHHHHSCH------------HHHHHHTTSSTHH T ss_pred HHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC------------HHHHHHHCCCCHH T ss_conf 999999-999985642455677789876446671375999999999999997350------------0777752056588 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCC Q ss_conf 89999999999999998311113114534575404998999999999999999999999-99875287663 Q gi|254780635|r 335 LAQEINDKFSNTMKDFHILKDRAENIESFDQMISENNPEGNKIVRNLINDLITQTESLR-KIRIALDLIEP 404 (412) Q Consensus 335 La~~i~~~f~~a~~~l~ai~~~~~~~~~~D~~i~~~~~~~~~~v~~ai~aL~~~~~~i~-~~~~~Lgl~~~ 404 (412) |+++|..+|+.+..+++.|+.++. ..+..++..+..++..| ...++ +++..|||+.. T Consensus 300 La~~I~~q~~~a~~~i~~l~~~~~----------~~d~~~~~~l~~~l~~L---~~~lk~d~~~~Lgi~~g 357 (364) T 3pf0_A 300 VADTLSTALADTTALLAQMPEDLA----------TADKATQQELYDHLTNI---TRLIKSQLIPTLGIRVG 357 (364) T ss_dssp HHHHHHHHHHHHHHHHHTSCSSGG----------GSCHHHHHHHHHHHHHH---HHHHHHTHHHHTTCCSC T ss_pred HHHHHHHHHHHHHHHHHHCCCCHH----------CCCHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCC T ss_conf 999999999999999983860221----------03758999999999999---99999988997194648 No 2 >3oyv_A Imelysin; outer membrane protein, extracellular active site, metal BIN protein, structural genomics; HET: MSE; 1.25A {Bacteroides ovatus atcc 8483} PDB: 3n8u_A* Probab=100.00 E-value=1.5e-37 Score=242.67 Aligned_cols=191 Identities=16% Similarity=0.248 Sum_probs=160.7 Q ss_pred CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHC-------CHHHHHHHHHHHHHHH Q ss_conf 30343201133454045679999999999999999999520355----410577621-------5344599999999999 Q gi|254780635|r 194 RPYTDFDIGNCTGGHCRRRVEYLKVVSKILVSDLEEMMKAWGPD----GQATKDLMK-------DINAGLNSIITGMTSL 262 (412) Q Consensus 194 r~~~d~~~~~~t~~~~~rr~~YL~ava~~l~~~~~~l~~~W~~~----~~~~~~~~~-------~~~~~~~~i~~g~~~~ 262 (412) +|..|+...+++..||.|||+||++++++|+.++++|.++|.++ +.|+..|.+ ++..+++.|++||+++ T Consensus 6 ~~~~~~~~~~~t~~n~~~r~~YL~av~~~l~~d~~~l~~~W~~~~~~~~~y~~~f~~~~~s~~~s~~~al~~il~g~~~~ 85 (361) T 3oyv_A 6 NPTVDPANIDYTPENASSWHNYMRNVAALLKTDATNLYNAWNSSYKGGESYASLFKAHSGSPYASALSCVEEIVDKCAEI 85 (361) T ss_dssp --CCCCCCCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSTTSSCHHHHHHHCCBTTBCSHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 88778655656552068899999999999999999999862657887444999986478877678999999999999999 Q ss_pred HHHHHHHCCCCCCCCC--CC-----HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHH Q ss_conf 8987643002242357--88-----4344666352728999999999999950333566654335646899997518878 Q gi|254780635|r 263 SYNELAGERMNLGLIL--HD-----PEQEIDCFSDNTYASYLNDVIGIISSYTGEYIRMNGEKIHGASIHDLISHNNRNL 335 (412) Q Consensus 263 ~~~Ev~~~Ki~~pl~~--~~-----pe~~Es~~S~~S~~d~~~Ni~gi~n~y~G~~~~~~g~~~~g~sl~d~l~~~~~~L 335 (412) . +||+++|||.|++. .+ |+.+|||||+|||.||.+|++||+|+|+|+|. | +++|+||.+||...|++| T Consensus 86 ~-~el~~~Kig~p~g~~~~~~~~~~~~~ves~fSdnS~~d~~~N~~gi~nvy~G~~~---g-~~~g~Sl~~~v~~~~~~L 160 (361) T 3oyv_A 86 A-NEVGTAKIGDPYNLYKAGNTEEALYAVESWYSWHSRDDYTNNIYSIRNAYYGSLD---G-NINANSLSTVIAGANSSL 160 (361) T ss_dssp H-HHHHHTTTHHHHHHHHTTCHHHHHHTCTTGGGTCHHHHHHHHHHHHHHHHHTCSS---S-CCCSSSHHHHHHHHCHHH T ss_pred H-HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC---C-CCCCCCHHHHHHHHCHHH T ss_conf 9-8873636532102566798742233431622535199999999999999717879---8-877747999998658788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCC Q ss_conf 9999999999999998311113114534575404998999999999999999999999-99875287 Q gi|254780635|r 336 AQEINDKFSNTMKDFHILKDRAENIESFDQMISENNPEGNKIVRNLINDLITQTESLR-KIRIALDL 401 (412) Q Consensus 336 a~~i~~~f~~a~~~l~ai~~~~~~~~~~D~~i~~~~~~~~~~v~~ai~aL~~~~~~i~-~~~~~Lgl 401 (412) +++|+++|+.++.+|++|+.| |++.|. +.+ .+.+++||+++...|+ +|.+.|.= T Consensus 161 ~~~i~~~i~~a~~ai~aI~~p------F~~~i~--~~~----~~aa~da~~~l~~~L~~~~~~~~~~ 215 (361) T 3oyv_A 161 DTKIKNAIQKAAKAIQDIPQP------FRNHIP--SNE----TVAAMDACAELESILKNDLKSYIAN 215 (361) T ss_dssp HHHHHHHHHHHHHHHHHSCSC------GGGCTT--SHH----HHHHHHHHHHHHHHHHTHHHHHHHC T ss_pred HHHHHHHHHHHHHHHHHCCHH------HHHHCC--CHH----HHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999999999827355------998806--888----8999999999999999988988750 No 3 >3oyv_A Imelysin; outer membrane protein, extracellular active site, metal BIN protein, structural genomics; HET: MSE; 1.25A {Bacteroides ovatus atcc 8483} PDB: 3n8u_A* Probab=100.00 E-value=7.8e-36 Score=232.31 Aligned_cols=150 Identities=24% Similarity=0.363 Sum_probs=121.2 Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999612664454666788999988788-6798899999999999999999994999889999999999999977765654 Q gi|254780635|r 9 IVFTLPSHALSIVPNVSLEKVLQNYAT-IAHAKYEDALMCARTLDSAIETLVTTPNKKNLENARLQWIRARIPYQQSEVY 87 (412) Q Consensus 9 ~~~~~~~~~~a~~~~~~~~~vl~~yad-iv~~~Y~d~~~~a~~L~~ai~af~a~Pt~~~L~aak~aw~~Ar~~we~~E~f 87 (412) ++..+.........++.+++||++|+| ||+|+|++++.++++|.+++++||++|++++|+++|.+|+.+|.+||++|+| T Consensus 209 ~~~~~~~~~~~~~~~~~l~~vl~n~vD~vIiP~Y~~l~~~a~~L~~a~~af~a~ps~~~L~~ar~aw~~a~~~Wq~~E~~ 288 (361) T 3oyv_A 209 LKSYIANNSNNINTDAVLNPVVTQYVDAVVVPTYKSLKEKNDALYNAVIVLADNPSNSAFETACDAWITAREPWEKSEAF 288 (361) T ss_dssp HHHHHHCGGGSCCSHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTTGGG T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 89887503688321757999999984310077299999999999999999980999899999999999999999998877 Q ss_pred HCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCH Q ss_conf 01540221000110016576210001123334443333322233336433435522222320397888766641666510 Q gi|254780635|r 88 RFGNKIVDTWDKKVNAWPLDEGFIDYVDSSYGKENEENNLYTANIIANSKIIVNEKEIDLSIISPDLLRKLHRANGIDTN 167 (412) Q Consensus 88 ~fGpa~~~~~~~~in~WPl~~~~iD~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~d~~~it~~~l~~~~e~~~~~~~ 167 (412) +|||+...+++++||+||++++.|++...+....... ....+ .+.....++ T Consensus 289 ~fGPa~~~~~~~~i~~wP~~~~~i~~~i~~~~~~~~~----------------------~~~~~-------~~~~~~~s~ 339 (361) T 3oyv_A 289 LFGPVDEMGLDPNMDSWPLDQNAIVQILNSQSWSDLE----------------------WSEGD-------DEAAVESAQ 339 (361) T ss_dssp CCGGGGSTTHHHHHHCSSCCHHHHHHHHTCHHHHHCC----------------------CCTTC-------CSCSSCCCG T ss_pred HCCCHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCCCC----------------------CCCCC-------CHHHCCCCH T ss_conf 5371655245766432768744898987412013322----------------------23346-------033213214 Q ss_pred HHCCHHHHHHHHCCCCCCCC Q ss_conf 21127899998627787776 Q gi|254780635|r 168 ITTGYHVIEFLLWGQDLKTN 187 (412) Q Consensus 168 ~~~GfhAiEyLLfg~~~~~~ 187 (412) .+||||||||||||++.+++ T Consensus 340 ~~~Gf~ALEyLLfgdG~pr~ 359 (361) T 3oyv_A 340 NVRGFHTLEFLLYKNGEPRK 359 (361) T ss_dssp GGSHHHHHHHHHEETTEECC T ss_pred HHCCHHHHHHHHHCCCCCCC T ss_conf 40186999999927998777 No 4 >1xou_A ESPA; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.1 Probab=17.85 E-value=36 Score=12.29 Aligned_cols=32 Identities=6% Similarity=0.072 Sum_probs=18.4 Q ss_pred CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 356468999975188789999999999999998311113 Q gi|254780635|r 319 IHGASIHDLISHNNRNLAQEINDKFSNTMKDFHILKDRA 357 (412) Q Consensus 319 ~~g~sl~d~l~~~~~~La~~i~~~f~~a~~~l~ai~~~~ 357 (412) +.+.++++|+.+.+ ..++..++.+|+..-... T Consensus 118 I~~~~Iddy~~~L~-------kG~LqaVKaALd~~snr~ 149 (192) T 1xou_A 118 ITISGIDNINAQLG-------AGDLQTVKAAISAKANNL 149 (192) T ss_dssp -------------------------------------CH T ss_pred CCCCCHHHHHHHCC-------CCHHHHHHHHHHHHCCCC T ss_conf 56356888764547-------210999999987001444 No 5 >2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans} Probab=16.75 E-value=38 Score=12.13 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=24.9 Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8999975188789999999999999998311113 Q gi|254780635|r 324 IHDLISHNNRNLAQEINDKFSNTMKDFHILKDRA 357 (412) Q Consensus 324 l~d~l~~~~~~La~~i~~~f~~a~~~l~ai~~~~ 357 (412) +.+.|+.++|.|..++..-......+++.+...+ T Consensus 51 ~i~alK~Ksp~L~~k~e~l~~~~k~Ki~~L~pea 84 (140) T 2w9y_A 51 MIDEVSKKHPELGKRLATVLEGNKKRLDGLSPAA 84 (140) T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHTTTTCCHHH T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHH T ss_conf 9999998698989999999999999988279889 No 6 >3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens} Probab=9.57 E-value=63 Score=10.82 Aligned_cols=60 Identities=17% Similarity=0.354 Sum_probs=41.6 Q ss_pred CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 64689999751887899999999999999983111131145345754049989999999999999999999999 Q gi|254780635|r 321 GASIHDLISHNNRNLAQEINDKFSNTMKDFHILKDRAENIESFDQMISENNPEGNKIVRNLINDLITQTESLRK 394 (412) Q Consensus 321 g~sl~d~l~~~~~~La~~i~~~f~~a~~~l~ai~~~~~~~~~~D~~i~~~~~~~~~~v~~ai~aL~~~~~~i~~ 394 (412) |+|| +.++...|-.++...|....+-++.+...- +. -..|...++..|.-|......++. T Consensus 1 ~ASL---lSAVeDKLrrrlkE~~~q~qaEl~sL~~t~------~e-----L~~G~~kl~~~i~rl~~E~~~l~~ 60 (78) T 3iv1_A 1 GSSL---ISAVSDKLRWRMKEEMDRAQAELNALKRTE------ED-----LKKGHQKLEEMVTRLDQEVAEVDK 60 (78) T ss_dssp CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH-----HHHHHHHHHHHHHHHHHHHHHHHH T ss_pred CCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH-----HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9128---999999999999999998877899999899------99-----997679999999999988999999 No 7 >2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus} Probab=7.52 E-value=77 Score=10.30 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=31.1 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 889999887886798899999999999999999994999889999999999999 Q gi|254780635|r 25 SLEKVLQNYATIAHAKYEDALMCARTLDSAIETLVTTPNKKNLENARLQWIRAR 78 (412) Q Consensus 25 ~~~~vl~~yadiv~~~Y~d~~~~a~~L~~ai~af~a~Pt~~~L~aak~aw~~Ar 78 (412) ..+.++.+.- .-+|.|.++.+.++.+..++.+.+. |-.+|..|. T Consensus 18 ~~q~i~~d~k-~s~p~~~~lv~~~~ky~~aL~a~~~---------Aa~~f~dA~ 61 (253) T 2d1l_A 18 LFQTIISDMK-GSYPVWEDFINKAGKLQSQLRTTVV---------AAAAFLDAF 61 (253) T ss_dssp HHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH T ss_pred HHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH T ss_conf 9999999887-3438899999989999999999999---------999999999 No 8 >1luc_B Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_B 1bsl_A 1xkj_A 3fgc_B* Probab=6.36 E-value=90 Score=9.91 Aligned_cols=15 Identities=0% Similarity=0.102 Sum_probs=10.8 Q ss_pred HCCHHHHHHHHCCCC Q ss_conf 112789999862778 Q gi|254780635|r 169 TTGYHVIEFLLWGQD 183 (412) Q Consensus 169 ~~GfhAiEyLLfg~~ 183 (412) -+|+...|+-.||.+ T Consensus 106 G~G~~~~~~~~~g~~ 120 (324) T 1luc_B 106 SDCEKSADMRFFNRP 120 (324) T ss_dssp ECCCCHHHHHHTTCC T ss_pred CCCCCHHHHHHCCCC T ss_conf 677668888751865 No 9 >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Probab=6.07 E-value=95 Score=9.75 Aligned_cols=61 Identities=15% Similarity=0.111 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC Q ss_conf 9999999999999999999499988999999999999997776565401540221000110016 Q gi|254780635|r 41 YEDALMCARTLDSAIETLVTTPNKKNLENARLQWIRARIPYQQSEVYRFGNKIVDTWDKKVNAW 104 (412) Q Consensus 41 Y~d~~~~a~~L~~ai~af~a~Pt~~~L~aak~aw~~Ar~~we~~E~f~fGpa~~~~~~~~in~W 104 (412) |..+...++.+.+..+...+ .++...|+.+|+.|-..|...+.+.+-|.....+...+..+ T Consensus 56 ~~~w~~~a~~~~~~a~~~~~---~g~~~sA~~~~~~Aa~~y~~a~~~~~d~~~~~~~~~~~~~~ 116 (386) T 2jbw_A 56 FDYWMSLANEYEQEAERKVA---LGHDLSAGELLMSAALCAQYAQFLWFDERRQKGQARKVELY 116 (386) T ss_dssp HHHHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH T ss_conf 99999999999999999998---79988999999999999996036358956899999999999 No 10 >3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} PDB: 1wa8_B Probab=6.03 E-value=96 Score=9.72 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=0.0 Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHCCHHHHHHHHHHHHHHH Q ss_conf 3201133454045679999999999999999999520355-4105776215344599999999999 Q gi|254780635|r 198 DFDIGNCTGGHCRRRVEYLKVVSKILVSDLEEMMKAWGPD-GQATKDLMKDINAGLNSIITGMTSL 262 (412) Q Consensus 198 d~~~~~~t~~~~~rr~~YL~ava~~l~~~~~~l~~~W~~~-~~~~~~~~~~~~~~~~~i~~g~~~~ 262 (412) ||.........-.....-+...-+.|...+..|...|.+. ...+.......+.....+...+..+ T Consensus 6 d~a~~~~~a~~l~~~~~~i~~~l~~L~~~v~~l~~~W~G~A~~af~~~~~~W~~~~~~~~~~L~~i 71 (94) T 3fav_B 6 NFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNL 71 (94) T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGTCTTCHHHHHHHHHHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 699999999999999999999999999999999856143478999999999999999999999999 Done!