HHsearch alignment for GI: 254780636 and conserved domain: COG3359
>COG3359 Predicted exonuclease [DNA replication, recombination, and repair].
Probab=97.88 E-value=0.00027 Score=44.18 Aligned_cols=153 Identities=20% Similarity=0.189 Sum_probs=91.5
Q ss_pred CCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEE-CCCCC--CCCCHHHHHHHHCCCC-CEE-ECCCCHHHHHHHH----
Q ss_conf 8279971777898544507999984189428997-46577--8570677677732364-023-0100001688865----
Q gi|254780636|r 21 DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDII-RIAAG--QKNAPNLVGMLVDEKR-EKI-FHYGRFDIAVLFY---- 91 (207)
Q Consensus 21 ~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~-~~~~~--~~~~~~L~~ll~d~~i-~KV-~Hn~~~D~~~L~~---- 91 (207)
T Consensus 99 ~~~FFDiETTGL~~ag~~I~~~g~a~~~~~~~~Vrq~~lp~p~~E~avle~fl~~~~~~~lvsfNGkaFD~PfikR~v~~ 178 (278)
T COG3359 99 DVAFFDIETTGLDRAGNTITLVGGARGVDDTMHVRQHFLPAPEEEVAVLENFLHDPDFNMLVSFNGKAFDIPFIKRMVRD 178 (278)
T ss_pred CEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHC
T ss_conf 25899633146688898599998887357569997512798413568999975389845599746832670899998751
Q ss_pred HHHCCCCC-HHHHHHHHHHHHHH-CCCHHHHHHHHHHHCCCCCCCCEE-------CCCCC---CCCCHHHHHHHHHHHHH
Q ss_conf 42000000-04578988652110-000008877765420024675200-------36565---44323689999864599
Q gi|254780636|r 92 TFGVRVRP-VFCTKIASRLTRTY-TNQHGLKDNLKELLGINISKAQQS-------SDWSA---DDLSDEQLQYAASDVVH 159 (207)
Q Consensus 92 ~~gi~~~~-i~DT~ias~l~~~~-~~~~~L~~L~~~~lg~~ldK~~q~-------SdW~~---rpLs~~Qi~YAA~Dv~~ 159 (207)
T Consensus 179 ~~el~l~~~H~DL~h~~RRlwk~~l~~c~Lk~V-Er~LGi~R~edtdG~~~p~lyr~~~~~~dp~ll~~l~~hN~eDvln 257 (278)
T COG3359 179 RLELSLEFGHFDLYHPSRRLWKHLLPRCGLKTV-ERILGIRREEDTDGYDGPELYRLYRRYGDPGLLDGLVLHNREDVLN 257 (278)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH-HHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
T ss_conf 644476666312210344531202878881367-8885755011589850199999998709877778988706998875
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999974
Q gi|254780636|r 160 LHALRLQFTEKLQRL 174 (207)
Q Consensus 160 l~~L~~~l~~~L~~~ 174 (207)
T Consensus 258 L~~i~~h~~~~i~~~ 272 (278)
T COG3359 258 LPTIIKHVSKKILED 272 (278)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999987