HHsearch alignment for GI: 254780636 and conserved domain: PRK05168

>PRK05168 ribonuclease T; Provisional.
Probab=98.98  E-value=6.2e-09  Score=71.18  Aligned_cols=140  Identities=19%  Similarity=0.240  Sum_probs=86.4

Q ss_pred             CCCEEEECCCCCCCCCCCEEEEEEEEEC------C------CCE-EEECCCC-------------C---------CCCCH
Q ss_conf             9827997177789854450799998418------9------428-9974657-------------7---------85706
Q gi|254780636|r   20 VDAIAVDTETLGLMPRRDRLCIVQLSPG------D------GTV-DIIRIAA-------------G---------QKNAP   64 (207)
Q Consensus        20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~------~------~~~-~l~~~~~-------------~---------~~~~~   64 (207)
T Consensus        17 ~~pVV~D~ETTGl~p~~D~I--IEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~~~~   94 (213)
T PRK05168         17 FLPVVIDVETAGFNAQTDAL--LEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVSEKE   94 (213)
T ss_pred             CCCEEEEEECCCCCCCCCCE--EEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             88759983079988778855--8888899886378867247548898788878878866751126786532223666788


Q ss_pred             HHHHHHH---C-------CCCCEEECCCCHHHHHHHHHH---HCCCC-----CHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             7767773---2-------364023010000168886542---00000-----0045789886521100000088777654
Q gi|254780636|r   65 NLVGMLV---D-------EKREKIFHYGRFDIAVLFYTF---GVRVR-----PVFCTKIASRLTRTYTNQHGLKDNLKEL  126 (207)
Q Consensus        65 ~L~~ll~---d-------~~i~KV~Hn~~~D~~~L~~~~---gi~~~-----~i~DT~ias~l~~~~~~~~~L~~L~~~~  126 (207)
T Consensus        95 al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~---~~~~L~~lc~~-  170 (213)
T PRK05168         95 ALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAY---GQTVLAKACQA-  170 (213)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHH---CCCCHHHHHHH-
T ss_conf             78999999999987504675637763418749999999998499778888776335899868874---87409999998-


Q ss_pred             HCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             20024675200365654432368999986459999999999999997491899
Q gi|254780636|r  127 LGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDL  179 (207)
Q Consensus       127 lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~~~~  179 (207)
T Consensus       171 ~gi~~~--------------~~~~HrAl~DA~~tA~vFl~ll~~l~~~g~~~~  209 (213)
T PRK05168        171 AGIEFD--------------NKEAHSALYDTEKTAELFCEIVNRWKRLGGWPL  209 (213)
T ss_pred             CCCCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             699999--------------977777389999999999999999997389999