HHsearch alignment for GI: 254780636 and conserved domain: PRK05168
>PRK05168 ribonuclease T; Provisional.
Probab=98.98 E-value=6.2e-09 Score=71.18 Aligned_cols=140 Identities=19% Similarity=0.240 Sum_probs=86.4
Q ss_pred CCCEEEECCCCCCCCCCCEEEEEEEEEC------C------CCE-EEECCCC-------------C---------CCCCH
Q ss_conf 9827997177789854450799998418------9------428-9974657-------------7---------85706
Q gi|254780636|r 20 VDAIAVDTETLGLMPRRDRLCIVQLSPG------D------GTV-DIIRIAA-------------G---------QKNAP 64 (207)
Q Consensus 20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~------~------~~~-~l~~~~~-------------~---------~~~~~ 64 (207)
T Consensus 17 ~~pVV~D~ETTGl~p~~D~I--IEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~~~~ 94 (213)
T PRK05168 17 FLPVVIDVETAGFNAQTDAL--LEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVSEKE 94 (213)
T ss_pred CCCEEEEEECCCCCCCCCCE--EEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 88759983079988778855--8888899886378867247548898788878878866751126786532223666788
Q ss_pred HHHHHHH---C-------CCCCEEECCCCHHHHHHHHHH---HCCCC-----CHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 7767773---2-------364023010000168886542---00000-----0045789886521100000088777654
Q gi|254780636|r 65 NLVGMLV---D-------EKREKIFHYGRFDIAVLFYTF---GVRVR-----PVFCTKIASRLTRTYTNQHGLKDNLKEL 126 (207)
Q Consensus 65 ~L~~ll~---d-------~~i~KV~Hn~~~D~~~L~~~~---gi~~~-----~i~DT~ias~l~~~~~~~~~L~~L~~~~ 126 (207)
T Consensus 95 al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~---~~~~L~~lc~~- 170 (213)
T PRK05168 95 ALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAY---GQTVLAKACQA- 170 (213)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHH---CCCCHHHHHHH-
T ss_conf 78999999999987504675637763418749999999998499778888776335899868874---87409999998-
Q ss_pred HCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 20024675200365654432368999986459999999999999997491899
Q gi|254780636|r 127 LGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDL 179 (207)
Q Consensus 127 lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~~~~ 179 (207)
T Consensus 171 ~gi~~~--------------~~~~HrAl~DA~~tA~vFl~ll~~l~~~g~~~~ 209 (213)
T PRK05168 171 AGIEFD--------------NKEAHSALYDTEKTAELFCEIVNRWKRLGGWPL 209 (213)
T ss_pred CCCCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 699999--------------977777389999999999999999997389999