HHsearch alignment for GI: 254780636 and conserved domain: PRK05755

>PRK05755 DNA polymerase I; Provisional.
Probab=100.00  E-value=2.4e-33  Score=213.04  Aligned_cols=189  Identities=23%  Similarity=0.247  Sum_probs=159.1

Q ss_pred             CCHHH-HCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCC-----CHHHHHHHHCCCCCEEECCCCH
Q ss_conf             88578-42489827997177789854450799998418942899746577857-----0677677732364023010000
Q gi|254780636|r   11 IPAEC-AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKN-----APNLVGMLVDEKREKIFHYGRF   84 (207)
Q Consensus        11 l~~~~-~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~-----~~~L~~ll~d~~i~KV~Hn~~~   84 (207)
T Consensus       309 l~~ll~~l~~~~~va~dtEttsld~~~a~lVGis~s~~~g~a~YIPl~~~~~~~~~~vl~~Lk~lLed~~i~KIghNlK~  388 (889)
T PRK05755        309 LEAWLAKLKKAGLVAFDTETTSLDPMSANLVGLSFAVEEGEAAYIPLAHDDQLDRDDALAALKPLLEDPAIPKVGQNLKY  388 (889)
T ss_pred             HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHH
T ss_conf             99999986528849999841788756576259999827996899844431336889999999999709887243203189


Q ss_pred             HHHHHHHHHHCCCCCH-HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCE------ECCCCCCCCCHHHHHHHHHHH
Q ss_conf             1688865420000000-457898865211000000887776542002467520------036565443236899998645
Q gi|254780636|r   85 DIAVLFYTFGVRVRPV-FCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQ------SSDWSADDLSDEQLQYAASDV  157 (207)
Q Consensus        85 D~~~L~~~~gi~~~~i-~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q------~SdW~~rpLs~~Qi~YAA~Dv  157 (207)
T Consensus       389 dl~vL~~~-GI~l~g~~fDTmLAaYLLdP~~~~~~Ld~La~~yL~~~~~~~eel~gkg~~~~~~~v~~-e~~~~YaaedA  466 (889)
T PRK05755        389 DRHILANY-GIELRGIAFDTMLASYLLDPGAGRHDLDSLAERYLGHKTISFEEVAGKGNQLTFAQVAL-EEAAEYAAEDA  466 (889)
T ss_pred             HHHHHHHC-CEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCH-HHHHHHHHHHH
T ss_conf             99999977-92357763019999987478877677899999863234420343136565566100787-89999999988


Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHCCCCCCC
Q ss_conf             9999999999999997491899999-99640068999866798888
Q gi|254780636|r  158 VHLHALRLQFTEKLQRLGRSDLATS-CCNFLMDRAELDLLGWENVD  202 (207)
Q Consensus       158 ~~l~~L~~~l~~~L~~~~~~~~~~~-e~~~l~~~~~me~~g~~~~~  202 (207)
T Consensus       467 ~~~~~L~~~L~~~L~~~~l~~Ly~~IE~PLi~VLa~ME~~GI~-VD  511 (889)
T PRK05755        467 DVTLRLHQVLKPELEEEGLLELYEEIELPLVPVLARMERNGIK-VD  511 (889)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEE-EC
T ss_conf             6899999999999986047889999875199999999960868-66