HHsearch alignment for GI: 254780636 and conserved domain: PRK05755
>PRK05755 DNA polymerase I; Provisional.
Probab=100.00 E-value=2.4e-33 Score=213.04 Aligned_cols=189 Identities=23% Similarity=0.247 Sum_probs=159.1
Q ss_pred CCHHH-HCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCC-----CHHHHHHHHCCCCCEEECCCCH
Q ss_conf 88578-42489827997177789854450799998418942899746577857-----0677677732364023010000
Q gi|254780636|r 11 IPAEC-AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKN-----APNLVGMLVDEKREKIFHYGRF 84 (207)
Q Consensus 11 l~~~~-~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~-----~~~L~~ll~d~~i~KV~Hn~~~ 84 (207)
T Consensus 309 l~~ll~~l~~~~~va~dtEttsld~~~a~lVGis~s~~~g~a~YIPl~~~~~~~~~~vl~~Lk~lLed~~i~KIghNlK~ 388 (889)
T PRK05755 309 LEAWLAKLKKAGLVAFDTETTSLDPMSANLVGLSFAVEEGEAAYIPLAHDDQLDRDDALAALKPLLEDPAIPKVGQNLKY 388 (889)
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHH
T ss_conf 99999986528849999841788756576259999827996899844431336889999999999709887243203189
Q ss_pred HHHHHHHHHHCCCCCH-HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCE------ECCCCCCCCCHHHHHHHHHHH
Q ss_conf 1688865420000000-457898865211000000887776542002467520------036565443236899998645
Q gi|254780636|r 85 DIAVLFYTFGVRVRPV-FCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQ------SSDWSADDLSDEQLQYAASDV 157 (207)
Q Consensus 85 D~~~L~~~~gi~~~~i-~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q------~SdW~~rpLs~~Qi~YAA~Dv 157 (207)
T Consensus 389 dl~vL~~~-GI~l~g~~fDTmLAaYLLdP~~~~~~Ld~La~~yL~~~~~~~eel~gkg~~~~~~~v~~-e~~~~YaaedA 466 (889)
T PRK05755 389 DRHILANY-GIELRGIAFDTMLASYLLDPGAGRHDLDSLAERYLGHKTISFEEVAGKGNQLTFAQVAL-EEAAEYAAEDA 466 (889)
T ss_pred HHHHHHHC-CEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCH-HHHHHHHHHHH
T ss_conf 99999977-92357763019999987478877677899999863234420343136565566100787-89999999988
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999999999997491899999-99640068999866798888
Q gi|254780636|r 158 VHLHALRLQFTEKLQRLGRSDLATS-CCNFLMDRAELDLLGWENVD 202 (207)
Q Consensus 158 ~~l~~L~~~l~~~L~~~~~~~~~~~-e~~~l~~~~~me~~g~~~~~ 202 (207)
T Consensus 467 ~~~~~L~~~L~~~L~~~~l~~Ly~~IE~PLi~VLa~ME~~GI~-VD 511 (889)
T PRK05755 467 DVTLRLHQVLKPELEEEGLLELYEEIELPLVPVLARMERNGIK-VD 511 (889)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEE-EC
T ss_conf 6899999999999986047889999875199999999960868-66