HHsearch alignment for GI: 254780636 and conserved domain: PRK06063

>PRK06063 DNA polymerase III subunit epsilon; Provisional.
Probab=98.80  E-value=1.2e-07  Score=63.64  Aligned_cols=131  Identities=21%  Similarity=0.240  Sum_probs=80.0

Q ss_pred             CCCCEEEECCCCCCCCCCCEEEEEEEEE----CCCC----E-EEECCCCCC-------------CCC-------HHHHHH
Q ss_conf             8982799717778985445079999841----8942----8-997465778-------------570-------677677
Q gi|254780636|r   19 YVDAIAVDTETLGLMPRRDRLCIVQLSP----GDGT----V-DIIRIAAGQ-------------KNA-------PNLVGM   69 (207)
Q Consensus        19 ~~~~iaiDtEt~~l~~~~~~l~LiQl~~----~~~~----~-~l~~~~~~~-------------~~~-------~~L~~l   69 (207)
T Consensus        14 ~~~fvvvD~ETTGl~p~~drIi--eig~v~~~~~g~i~~~~~tlvnP~~dp~~~~IhGIt~~~v~~aP~f~ev~~~l~~~   91 (313)
T PRK06063         14 GQGWAVVDVETSGFRPGQARII--SVAVLGLDADGNVEQSVVSLLNPGVDPGPTHVHGLTAAMLEGQPQFADIAGELAEV   91 (313)
T ss_pred             CCCEEEEEEECCCCCCCCCEEE--EEEEEEEECCCEEEEEEEEEECCCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHH
T ss_conf             9997999976899999897069--99999998997888999997591999898434187999981799899999999999


Q ss_pred             HHCCCCCEEECCCCHHHHHHHHHH---HCC-C-CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCC
Q ss_conf             732364023010000168886542---000-0-00045789886521100000088777654200246752003656544
Q gi|254780636|r   70 LVDEKREKIFHYGRFDIAVLFYTF---GVR-V-RPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADD  144 (207)
Q Consensus        70 l~d~~i~KV~Hn~~~D~~~L~~~~---gi~-~-~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rp  144 (207)
T Consensus        92 l~g-~-vlVAHNa~FD~~FL~~e~~r~g~~~p~~~~lcTl~lARr~~~~l~~~kL~tla~~-~Gi~~~~~H~--------  160 (313)
T PRK06063         92 LRG-R-TLVAHNVAFDYSFLAAEAELAGAELPVDQVMCTVELARRLDLGLPNLRLETLAAH-WGVVQQRPHD--------  160 (313)
T ss_pred             HCC-C-EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHH-CCCCCCCCCC--------
T ss_conf             789-9-7999685652999999999739988999667689988654489999747889998-0999887655--------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32368999986459999999999999
Q gi|254780636|r  145 LSDEQLQYAASDVVHLHALRLQFTEK  170 (207)
Q Consensus       145 Ls~~Qi~YAA~Dv~~l~~L~~~l~~~  170 (207)
T Consensus       161 --------Al~DAra~a~il~~~l~~  178 (313)
T PRK06063        161 --------ALDDARVLAGILAPALER  178 (313)
T ss_pred             --------CHHHHHHHHHHHHHHHHH
T ss_conf             --------067789999998999986