HHsearch alignment for GI: 254780636 and conserved domain: PRK06310

>PRK06310 DNA polymerase III subunit epsilon; Validated.
Probab=99.28  E-value=4.4e-11  Score=83.64  Aligned_cols=136  Identities=16%  Similarity=0.185  Sum_probs=89.4

Q ss_pred             HCCCCCCEEEECCCCCCCCCCCEEEEEEEEE----CCCC----EEEECCCCC-C--------------CCCH-------H
Q ss_conf             4248982799717778985445079999841----8942----899746577-8--------------5706-------7
Q gi|254780636|r   16 AARYVDAIAVDTETLGLMPRRDRLCIVQLSP----GDGT----VDIIRIAAG-Q--------------KNAP-------N   65 (207)
Q Consensus        16 ~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~----~~~~----~~l~~~~~~-~--------------~~~~-------~   65 (207)
T Consensus         3 ll~~~~yvv~D~ETTGl~~~~DrI--IEI~~vkv~~~~i~~~~~~linP~~~I~~~~~~ihGIt~emV~d~P~f~ev~~~   80 (250)
T PRK06310          3 LLKDTEFVCLDCETTGLDVKKDRI--IEFAAIRFTFDEVIDSMEFLINPERVVSAESQRIHHISDAMLRDKPKIAEVFPQ   80 (250)
T ss_pred             CCCCCCEEEEEEECCCCCCCCCEE--EEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHH
T ss_conf             666898899973379979999627--999999999998868899998928979988987615489998469999999999


Q ss_pred             HHHHHHCCCCCEEECCCCHHHHHHHHHH---HCCC----CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEC
Q ss_conf             7677732364023010000168886542---0000----00045789886521100000088777654200246752003
Q gi|254780636|r   66 LVGMLVDEKREKIFHYGRFDIAVLFYTF---GVRV----RPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSS  138 (207)
Q Consensus        66 L~~ll~d~~i~KV~Hn~~~D~~~L~~~~---gi~~----~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~S  138 (207)
T Consensus        81 ~~~fi~~~~il-VaHNa~FD~~fL~~e~~r~g~~~~~~~~~~IDTl~lAr~~~-~~~~~~L~~L~~~-~~i~~~~a----  153 (250)
T PRK06310         81 IKGFFKEGDYI-VGHSVGFDLQVLAQEAERIGETFLSKHYYIIDTLRLAKEYG-DSPNNSLEALAVH-FNVPYDGN----  153 (250)
T ss_pred             HHHHHCCCCEE-EEECHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHCC-CCCCCHHHHHHHH-CCCCCCCC----
T ss_conf             99996799999-99384557999999999769986656795784999997567-6545609999997-09999866----


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6565443236899998645999999999999999
Q gi|254780636|r  139 DWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQ  172 (207)
Q Consensus       139 dW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~  172 (207)
T Consensus       154 ------------HrAl~Da~aTa~vf~~l~~r~~  175 (250)
T PRK06310        154 ------------HRAMKDVEININVFKHLCKRFR  175 (250)
T ss_pred             ------------CCHHHHHHHHHHHHHHHHHHCC
T ss_conf             ------------6819999999999999998553