HHsearch alignment for GI: 254780636 and conserved domain: PRK07247
>PRK07247 DNA polymerase III subunit epsilon; Validated.
Probab=98.67 E-value=5e-07 Score=60.08 Aligned_cols=136 Identities=16% Similarity=0.050 Sum_probs=81.8
Q ss_pred CCCEEEECCCCCCCCCCCEEEEEEEEEC---CC-CE----EEECCCCC-C--------------CCC-------HHHHHH
Q ss_conf 9827997177789854450799998418---94-28----99746577-8--------------570-------677677
Q gi|254780636|r 20 VDAIAVDTETLGLMPRRDRLCIVQLSPG---DG-TV----DIIRIAAG-Q--------------KNA-------PNLVGM 69 (207)
Q Consensus 20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~---~~-~~----~l~~~~~~-~--------------~~~-------~~L~~l 69 (207)
T Consensus 5 ~~yvv~DlETTg~~~~-~~--IIEIgAVk~~~g~ivd~F~slVnP~~~I~~~i~~lTGIt~~~v~~aP~~~eVl~~f~~F 81 (195)
T PRK07247 5 ETYIAFDLEFNTVNDV-SH--IIQVSAVKYDHHKEVDSFDTYVYTDVPLQSFINGLTGITADKIAAAPKVEEVLAAFKNF 81 (195)
T ss_pred CEEEEEEEECCCCCCC-CE--EEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 8499999778999999-80--69999999989989999983566989999555413598999983599999999999999
Q ss_pred HHCCCCCEEECCC-CHHHHHHHHHH---HCCC-CCHHHHHHHHH-HHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCC
Q ss_conf 7323640230100-00168886542---0000-00045789886-52110000008877765420024675200365654
Q gi|254780636|r 70 LVDEKREKIFHYG-RFDIAVLFYTF---GVRV-RPVFCTKIASR-LTRTYTNQHGLKDNLKELLGINISKAQQSSDWSAD 143 (207)
Q Consensus 70 l~d~~i~KV~Hn~-~~D~~~L~~~~---gi~~-~~i~DT~ias~-l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~r 143 (207)
T Consensus 82 igd~~--lVaHNa~~FD~~fL~~~~~~~~~~~~~~~~~~~~~~r~~~~p~l~n~kL~tLa~~-f~I~-~----------- 146 (195)
T PRK07247 82 VGELP--LIGYNAQKSDLPILAENGLDLRDQYQVDLFDEAFDRRSSDLNGIANLKLQTVATF-LGIK-G----------- 146 (195)
T ss_pred HCCCE--EEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH-CCCC-C-----------
T ss_conf 68991--8990884514999999877415776685699999998860588767778999997-4999-9-----------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 43236899998645999999999999999749189
Q gi|254780636|r 144 DLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSD 178 (207)
Q Consensus 144 pLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~~~ 178 (207)
T Consensus 147 ---~~--HRAl~DA~aTa~If~klLe~~~~~~~~~ 176 (195)
T PRK07247 147 ---RG--HNSLEDARMTARIYESFLETDTNKAYLS 176 (195)
T ss_pred ---CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---89--0818999999999999999766433677