HHsearch alignment for GI: 254780636 and conserved domain: PRK07247

>PRK07247 DNA polymerase III subunit epsilon; Validated.
Probab=98.67  E-value=5e-07  Score=60.08  Aligned_cols=136  Identities=16%  Similarity=0.050  Sum_probs=81.8

Q ss_pred             CCCEEEECCCCCCCCCCCEEEEEEEEEC---CC-CE----EEECCCCC-C--------------CCC-------HHHHHH
Q ss_conf             9827997177789854450799998418---94-28----99746577-8--------------570-------677677
Q gi|254780636|r   20 VDAIAVDTETLGLMPRRDRLCIVQLSPG---DG-TV----DIIRIAAG-Q--------------KNA-------PNLVGM   69 (207)
Q Consensus        20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~---~~-~~----~l~~~~~~-~--------------~~~-------~~L~~l   69 (207)
T Consensus         5 ~~yvv~DlETTg~~~~-~~--IIEIgAVk~~~g~ivd~F~slVnP~~~I~~~i~~lTGIt~~~v~~aP~~~eVl~~f~~F   81 (195)
T PRK07247          5 ETYIAFDLEFNTVNDV-SH--IIQVSAVKYDHHKEVDSFDTYVYTDVPLQSFINGLTGITADKIAAAPKVEEVLAAFKNF   81 (195)
T ss_pred             CEEEEEEEECCCCCCC-CE--EEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf             8499999778999999-80--69999999989989999983566989999555413598999983599999999999999


Q ss_pred             HHCCCCCEEECCC-CHHHHHHHHHH---HCCC-CCHHHHHHHHH-HHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCC
Q ss_conf             7323640230100-00168886542---0000-00045789886-52110000008877765420024675200365654
Q gi|254780636|r   70 LVDEKREKIFHYG-RFDIAVLFYTF---GVRV-RPVFCTKIASR-LTRTYTNQHGLKDNLKELLGINISKAQQSSDWSAD  143 (207)
Q Consensus        70 l~d~~i~KV~Hn~-~~D~~~L~~~~---gi~~-~~i~DT~ias~-l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~r  143 (207)
T Consensus        82 igd~~--lVaHNa~~FD~~fL~~~~~~~~~~~~~~~~~~~~~~r~~~~p~l~n~kL~tLa~~-f~I~-~-----------  146 (195)
T PRK07247         82 VGELP--LIGYNAQKSDLPILAENGLDLRDQYQVDLFDEAFDRRSSDLNGIANLKLQTVATF-LGIK-G-----------  146 (195)
T ss_pred             HCCCE--EEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH-CCCC-C-----------
T ss_conf             68991--8990884514999999877415776685699999998860588767778999997-4999-9-----------


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             43236899998645999999999999999749189
Q gi|254780636|r  144 DLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSD  178 (207)
Q Consensus       144 pLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~~~  178 (207)
T Consensus       147 ---~~--HRAl~DA~aTa~If~klLe~~~~~~~~~  176 (195)
T PRK07247        147 ---RG--HNSLEDARMTARIYESFLETDTNKAYLS  176 (195)
T ss_pred             ---CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ---89--0818999999999999999766433677