HHsearch alignment for GI: 254780636 and conserved domain: PRK09145
>PRK09145 DNA polymerase III subunit epsilon; Validated.
Probab=98.97 E-value=4e-09 Score=72.30 Aligned_cols=131 Identities=20% Similarity=0.281 Sum_probs=77.3
Q ss_pred CCCCCEEEECCCCCCCCCCCEEEEEEEEE---CCC------CE-EEECCCCCCC---------------CC-------HH
Q ss_conf 48982799717778985445079999841---894------28-9974657785---------------70-------67
Q gi|254780636|r 18 RYVDAIAVDTETLGLMPRRDRLCIVQLSP---GDG------TV-DIIRIAAGQK---------------NA-------PN 65 (207)
Q Consensus 18 ~~~~~iaiDtEt~~l~~~~~~l~LiQl~~---~~~------~~-~l~~~~~~~~---------------~~-------~~ 65 (207)
T Consensus 27 ~~~~fVv~D~ETTGL~~~~D~I--ieIgav~v~~~~i~~~~~f~~lV~P~~~i~~~~~~IhGIt~~~l~~ap~~~evl~~ 104 (203)
T PRK09145 27 PPDEWVALDCETTGLDPRRAEI--VSIAAVKIRGNRILTSERLELLVRPPQSLSAESIKIHRLRHQDLEHGLSEEEALRQ 104 (203)
T ss_pred CCCCEEEEEEECCCCCCCCCEE--EEEEEEEEECCEEECCCEEEEEECCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHH
T ss_conf 9998999985689999999706--99999999999993175289998979959864520138787998139999999999
Q ss_pred HHHHHHCCCCCEEECCCCHHHHHHHHH----HHCCC-CCHHHHHH--HHHHHHH---HCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 767773236402301000016888654----20000-00045789--8865211---00000088777654200246752
Q gi|254780636|r 66 LVGMLVDEKREKIFHYGRFDIAVLFYT----FGVRV-RPVFCTKI--ASRLTRT---YTNQHGLKDNLKELLGINISKAQ 135 (207)
Q Consensus 66 L~~ll~d~~i~KV~Hn~~~D~~~L~~~----~gi~~-~~i~DT~i--as~l~~~---~~~~~~L~~L~~~~lg~~ldK~~ 135 (207)
T Consensus 105 f~~fi~~~--~lVgHNa~FD~~fL~~~~~r~~g~~l~~~~id~~~l~~~~~~~~~~~~~~~~~L~~l~~~-~gi~~---- 177 (203)
T PRK09145 105 LLAFIGNR--PLVGYYLEFDVAMLNRYVRPLLGIGLPNPLIEVSSLYHDKKERHLPDAYIDLRFDAILKH-LDLPV---- 177 (203)
T ss_pred HHHHCCCC--EEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHH-CCCCC----
T ss_conf 99882999--899987899999999999996299999987760987999999667698778899999985-79878----
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0036565443236899998645999999999999
Q gi|254780636|r 136 QSSDWSADDLSDEQLQYAASDVVHLHALRLQFTE 169 (207)
Q Consensus 136 q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~ 169 (207)
T Consensus 178 ------------~~~HrAL~DA~aTa~lfl~L~k 199 (203)
T PRK09145 178 ------------LGRHDALNDAIMTALIYLRLRK 199 (203)
T ss_pred ------------CCCCCHHHHHHHHHHHHHHHHC
T ss_conf ------------9997989999999999999867