HHsearch alignment for GI: 254780636 and conserved domain: PRK09182
>PRK09182 DNA polymerase III subunit epsilon; Validated.
Probab=97.57 E-value=0.00017 Score=45.36 Aligned_cols=82 Identities=24% Similarity=0.390 Sum_probs=48.2
Q ss_pred CEEEECCCCCCCCCCCEEE---EEEEE-ECCCCEE-EECC-CC----CCCC---------------------CHHHHHHH
Q ss_conf 2799717778985445079---99984-1894289-9746-57----7857---------------------06776777
Q gi|254780636|r 22 AIAVDTETLGLMPRRDRLC---IVQLS-PGDGTVD-IIRI-AA----GQKN---------------------APNLVGML 70 (207)
Q Consensus 22 ~iaiDtEt~~l~~~~~~l~---LiQl~-~~~~~~~-l~~~-~~----~~~~---------------------~~~L~~ll 70 (207)
T Consensus 39 g~~lD~ETTGl~~~~d~IIElg~v~f~~~~~G~i~~i~~~~~~~~dP~~pIp~~it~lTGItd~mV~Gq~id~~~V~~~~ 118 (293)
T PRK09182 39 GVILDTETTGLDPRKDEIIEIGMVAFEYDDDGRIGDVVDTFGGLQQPSRPIPPEITRLTGITDEMVAGQTIDPAEVDALI 118 (293)
T ss_pred EEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCEECCCCCCCCCCHHHHHHCCCCHHHHCCCCCCHHHHHHHH
T ss_conf 99995305788977877999768999986998587764323110389998998798751888899688827999999986
Q ss_pred HCCCCCEEECCCCHHHHHHHHHHHCCCC-CHHHHH
Q ss_conf 3236402301000016888654200000-004578
Q gi|254780636|r 71 VDEKREKIFHYGRFDIAVLFYTFGVRVR-PVFCTK 104 (207)
Q Consensus 71 ~d~~i~KV~Hn~~~D~~~L~~~~gi~~~-~i~DT~ 104 (207)
T Consensus 119 ~~adli-iAHNA~FDR~F~E~~~p~f~~k~WaCS~ 152 (293)
T PRK09182 119 APADLI-IAHNAGFDRPFLERFSPVFANKPWACSV 152 (293)
T ss_pred CCCCEE-EECCCCCCHHHHHHHCCCCCCCCEEEEC
T ss_conf 449899-9817754677898509532587505316