HHsearch alignment for GI: 254780636 and conserved domain: PRK11779
>PRK11779 sbcB exonuclease I; Provisional.
Probab=96.51 E-value=0.058 Score=30.68 Aligned_cols=145 Identities=21% Similarity=0.153 Sum_probs=75.1
Q ss_pred CCCCEEEECCCCCCCCCCCEEEEEEEEEC--CCCE--------EEECCCCCC-----------CC--------------C
Q ss_conf 89827997177789854450799998418--9428--------997465778-----------57--------------0
Q gi|254780636|r 19 YVDAIAVDTETLGLMPRRDRLCIVQLSPG--DGTV--------DIIRIAAGQ-----------KN--------------A 63 (207)
Q Consensus 19 ~~~~iaiDtEt~~l~~~~~~l~LiQl~~~--~~~~--------~l~~~~~~~-----------~~--------------~ 63 (207)
T Consensus 6 ~~~f~fyD~ETtG~~~~~dqi--~Qfa~i~td~~ln~i~~~~~~~c~~~~~~lP~p~A~lvt~itp~~~~~~~~~~~~~~ 83 (477)
T PRK11779 6 QPTFLWHDYETFGANPALDRP--AQFAGIRTDADLNIIGEPLVFYCKPADDYLPSPEAVLITGITPQEALEKGLPEAEFA 83 (477)
T ss_pred CCCEEEEECCCCCCCCCCCCC--CEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHCCCCHHHHH
T ss_conf 785799945368999877650--125778987753725774105644799989993043114889999986699879999
Q ss_pred HHHHHHHHCCCCCEEECC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC-----CC--C-CCC
Q ss_conf 677677732364023010-00016888654200000004578988652110000008877765420-----02--4-675
Q gi|254780636|r 64 PNLVGMLVDEKREKIFHY-GRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLG-----IN--I-SKA 134 (207)
Q Consensus 64 ~~L~~ll~d~~i~KV~Hn-~~~D~~~L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg-----~~--l-dK~ 134 (207)
T Consensus 84 ~~i~~~~~~~~t~~iGyNsi~FDee~~R~~f---y~nl~dPY~~~~~-ng-NsR~Dll~~~r~~~~~~p~~i~~p~~~~G 158 (477)
T PRK11779 84 ARIHAEFSQPGTCILGYNNIRFDDEVTRYIF---YRNFYDPYAREWQ-NG-NSRWDLLDVVRACYALRPEGINWPENEDG 158 (477)
T ss_pred HHHHHHHCCCCCEEEECCCCCCCHHHHHHHH---HHHCCCHHHHHCC-CC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9999996689848982277544899999999---9861345766424-89-70579999999998748366116737999
Q ss_pred C---EECCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2---003656-54432368999986459999999999999
Q gi|254780636|r 135 Q---QSSDWS-ADDLSDEQLQYAASDVVHLHALRLQFTEK 170 (207)
Q Consensus 135 ~---q~SdW~-~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~ 170 (207)
T Consensus 159 ~~sfKLe~la~aNgi~h~~AHDAl~Dv~aTi~laklIk~k 198 (477)
T PRK11779 159 LPSFKLEHLTKANGIEHENAHDAMSDVYATIAMAKLIKQK 198 (477)
T ss_pred CEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8544499999855987655410688999999999999876