HHsearch alignment for GI: 254780636 and conserved domain: PRK11779

>PRK11779 sbcB exonuclease I; Provisional.
Probab=96.51  E-value=0.058  Score=30.68  Aligned_cols=145  Identities=21%  Similarity=0.153  Sum_probs=75.1

Q ss_pred             CCCCEEEECCCCCCCCCCCEEEEEEEEEC--CCCE--------EEECCCCCC-----------CC--------------C
Q ss_conf             89827997177789854450799998418--9428--------997465778-----------57--------------0
Q gi|254780636|r   19 YVDAIAVDTETLGLMPRRDRLCIVQLSPG--DGTV--------DIIRIAAGQ-----------KN--------------A   63 (207)
Q Consensus        19 ~~~~iaiDtEt~~l~~~~~~l~LiQl~~~--~~~~--------~l~~~~~~~-----------~~--------------~   63 (207)
T Consensus         6 ~~~f~fyD~ETtG~~~~~dqi--~Qfa~i~td~~ln~i~~~~~~~c~~~~~~lP~p~A~lvt~itp~~~~~~~~~~~~~~   83 (477)
T PRK11779          6 QPTFLWHDYETFGANPALDRP--AQFAGIRTDADLNIIGEPLVFYCKPADDYLPSPEAVLITGITPQEALEKGLPEAEFA   83 (477)
T ss_pred             CCCEEEEECCCCCCCCCCCCC--CEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHCCCCHHHHH
T ss_conf             785799945368999877650--125778987753725774105644799989993043114889999986699879999


Q ss_pred             HHHHHHHHCCCCCEEECC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC-----CC--C-CCC
Q ss_conf             677677732364023010-00016888654200000004578988652110000008877765420-----02--4-675
Q gi|254780636|r   64 PNLVGMLVDEKREKIFHY-GRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLG-----IN--I-SKA  134 (207)
Q Consensus        64 ~~L~~ll~d~~i~KV~Hn-~~~D~~~L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg-----~~--l-dK~  134 (207)
T Consensus        84 ~~i~~~~~~~~t~~iGyNsi~FDee~~R~~f---y~nl~dPY~~~~~-ng-NsR~Dll~~~r~~~~~~p~~i~~p~~~~G  158 (477)
T PRK11779         84 ARIHAEFSQPGTCILGYNNIRFDDEVTRYIF---YRNFYDPYAREWQ-NG-NSRWDLLDVVRACYALRPEGINWPENEDG  158 (477)
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCHHHHHHHH---HHHCCCHHHHHCC-CC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9999996689848982277544899999999---9861345766424-89-70579999999998748366116737999


Q ss_pred             C---EECCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2---003656-54432368999986459999999999999
Q gi|254780636|r  135 Q---QSSDWS-ADDLSDEQLQYAASDVVHLHALRLQFTEK  170 (207)
Q Consensus       135 ~---q~SdW~-~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~  170 (207)
T Consensus       159 ~~sfKLe~la~aNgi~h~~AHDAl~Dv~aTi~laklIk~k  198 (477)
T PRK11779        159 LPSFKLEHLTKANGIEHENAHDAMSDVYATIAMAKLIKQK  198 (477)
T ss_pred             CEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             8544499999855987655410688999999999999876