HHsearch alignment for GI: 254780636 and conserved domain: TIGR01407

>TIGR01407 dinG_rel DnaQ family exonuclease/DinG family helicase, putative; InterPro: IPR006310 These are a family of proteins in Gram-positive bacteria. The N-terminal region of about 200 amino acids resembles the epsilon subunit of E. coli DNA polymerase III and the homologous region of the Gram-positive type DNA polymerase III alpha subunit. The epsilon subunit contains an exonuclease domain. The remainder of this protein family resembles a predicted ATP-dependent helicase, the DNA damage-inducible protein DinG of Escherichia coli. .
Probab=98.85  E-value=7e-08  Score=65.04  Aligned_cols=134  Identities=24%  Similarity=0.292  Sum_probs=84.9

Q ss_pred             CEEEECCCCCCCCCC-CEEEEEEEEE---CCCCE---EEECCCCCCCCC-----------------H-------HHHHHH
Q ss_conf             279971777898544-5079999841---89428---997465778570-----------------6-------776777
Q gi|254780636|r   22 AIAVDTETLGLMPRR-DRLCIVQLSP---GDGTV---DIIRIAAGQKNA-----------------P-------NLVGML   70 (207)
Q Consensus        22 ~iaiDtEt~~l~~~~-~~l~LiQl~~---~~~~~---~l~~~~~~~~~~-----------------~-------~L~~ll   70 (207)
T Consensus         2 YaVVDLEtTg~~~~~~d~I--IqiGiV~v~DgeIv~~f~T~VNP~~~~pp~I~eLTGisd~~l~~AP~F~qVA~~i~~~l   79 (944)
T TIGR01407         2 YAVVDLETTGTDSSEFDKI--IQIGIVLVEDGEIVDTFATDVNPNEPIPPFIQELTGISDEQLKQAPYFSQVAQEIYDLL   79 (944)
T ss_pred             EEEEEEEECCCCCCCCCCE--EEEEEEEEECCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCHHHHHHHHHHHH
T ss_conf             6899874168886455766--89988998558143201267788987761145422877686404888879999999874


Q ss_pred             HCCCCCEEECCCCHHHHHHHHHH---HCCC--CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCC
Q ss_conf             32364023010000168886542---0000--000457898865211000000887776542002467520036565443
Q gi|254780636|r   71 VDEKREKIFHYGRFDIAVLFYTF---GVRV--RPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADDL  145 (207)
Q Consensus        71 ~d~~i~KV~Hn~~~D~~~L~~~~---gi~~--~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rpL  145 (207)
T Consensus        80 ~D~--iFVAHNV~FD~nfL~k~l~~~G~~~~~~~~iDTVELa~if~PT~esY~Ls~L~E~-LGl~h~npH~---------  147 (944)
T TIGR01407        80 EDG--IFVAHNVHFDLNFLAKELVDEGYEPLEVPRIDTVELARIFFPTEESYKLSELSEE-LGLEHENPHR---------  147 (944)
T ss_pred             CCC--EEEEECHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHH-HCCCCCCCCC---------
T ss_conf             297--2776101506789999998568974343520056799874674435561489997-1987146676---------


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             2368999986459999999999999997491
Q gi|254780636|r  146 SDEQLQYAASDVVHLHALRLQFTEKLQRLGR  176 (207)
Q Consensus       146 s~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~  176 (207)
T Consensus       148 -------AdSDA~~TAeLLLl~~~K~~~LPl  171 (944)
T TIGR01407       148 -------ADSDAQVTAELLLLLEEKMKKLPL  171 (944)
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -------105789999999999999875108