HHsearch alignment for GI: 254780636 and conserved domain: cd00007
>cd00007 35EXOc 3'-5' exonuclease. The 35EXOc domain is responsible for the 3'-5' exonuclease proofreading activity of prokaryotic DNA polymerase I (pol I) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the Klenow fragment in E. coli pol I. 35EXOc is also found in the Werner syndrome helicase (WRN), focus forming activity 1 protein (FFA-1) and ribonuclease D (RNase D).
Probab=100.00 E-value=7.8e-38 Score=239.13 Aligned_cols=151 Identities=32% Similarity=0.329 Sum_probs=134.7
Q ss_pred CCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCH
Q ss_conf 82799717778985445079999841894289974657785706776777323640230100001688865420000000
Q gi|254780636|r 21 DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIAVLFYTFGVRVRPV 100 (207)
Q Consensus 21 ~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~~L~~~~gi~~~~i 100 (207)
T Consensus 1 ~~ia~D~Et~~l~~~~~~i~~iql~~~~~~~yi~~~~~~~~~~~~l~~~l~~~~i~Kv~hn~k~D~~~L~~~~~~~~~~~ 80 (155)
T cd00007 1 KEVAFDTETTGLNYHRGKLVGIQIATAGEAAYIPDELELEEDLEALKELLEDEDITKVGHDAKFDLVVLARDGIELPGNI 80 (155)
T ss_pred CEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCE
T ss_conf 98999898799977888099999998993599981475524699999998299973898734000999986286013501
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 457898865211000000887776542002467520036565----44323689999864599999999999999
Q gi|254780636|r 101 FCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSA----DDLSDEQLQYAASDVVHLHALRLQFTEKL 171 (207)
Q Consensus 101 ~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~----rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L 171 (207)
T Consensus 81 ~Dt~iaa~ll~~~~~~~~L~~l~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~~~~YAa~D~~~~~~l~~~l~~~l 155 (155)
T cd00007 81 FDTMLAAYLLNPGEGSHSLDDLAKEYLGIELDKDEQIYGKGAKTFARPLSEELLEYAAEDADALLRLYEKLLEEL 155 (155)
T ss_pred EHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 149999998477855236999999983987674888617765444479989999999999999999999999659