HHsearch alignment for GI: 254780636 and conserved domain: smart00474
>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=100.00 E-value=5.8e-41 Score=257.31 Aligned_cols=162 Identities=35% Similarity=0.456 Sum_probs=142.2
Q ss_pred CCCHHHH-CC-CCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHH
Q ss_conf 8885784-24-898279971777898544507999984189428997465778570677677732364023010000168
Q gi|254780636|r 10 DIPAECA-AR-YVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIA 87 (207)
Q Consensus 10 dl~~~~~-l~-~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~ 87 (207)
T Consensus 9 ~l~~~~~~l~~~~~~i~~DtE~~~~~~~~~~l~~iql~~~~~~~yi~~~~~~~~~~~~l~~ll~~~~i~kv~hn~k~D~~ 88 (172)
T smart00474 9 TLEELLEKLRAAGGEVALDTETTGLNSYSGKLVLIQISVTGEGAFIIDPLALGDDLEILKDLLEDETITKVGHNAKFDLH 88 (172)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECHHHHHH
T ss_conf 99999999984299599988306885378758999999689848997012242179999999809998599974599999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88654200000004578988652110000008877765420024675200365654432368999986459999999999
Q gi|254780636|r 88 VLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQF 167 (207)
Q Consensus 88 ~L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l 167 (207)
T Consensus 89 ~L~~-~gi~l~~v~Dt~ia~~l~~~~~~~~~L~~l~~~~~~~~l~k~~~~~~w~~rpl~~~~~~YAa~Da~~~~~l~~~l 167 (172)
T smart00474 89 VLAR-FGIELENIFDTMLAAYLLLGGPSKHGLATLLKEYLGVELDKEEQKSDWGARPLSEEQLQYAAEDADALLRLYEKL 167 (172)
T ss_pred HHHH-CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9997-798567524679987750579864899999999749231555564666789990999999999999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780636|r 168 TEKLQ 172 (207)
Q Consensus 168 ~~~L~ 172 (207)
T Consensus 168 ~~~L~ 172 (172)
T smart00474 168 EKELE 172 (172)
T ss_pred HHHHC
T ss_conf 99729