HHsearch results for GI: 254780636 and protein with PDBid: 1noy_A
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=95.14 E-value=0.14 Score=27.20 Aligned_cols=95 Identities=8% Similarity=-0.043 Sum_probs=51.8
Q ss_pred HCCCCCEEECCC-CHHHHHHHHHHHCC-------------------------------CC--CHHHHHHHHHHH-HHHCC
Q ss_conf 323640230100-00168886542000-------------------------------00--004578988652-11000
Q gi|254780636|r 71 VDEKREKIFHYG-RFDIAVLFYTFGVR-------------------------------VR--PVFCTKIASRLT-RTYTN 115 (207)
Q Consensus 71 ~d~~i~KV~Hn~-~~D~~~L~~~~gi~-------------------------------~~--~i~DT~ias~l~-~~~~~ 115 (207)
.||+|+ +|||. .||+..|.+..... .. ..+|.+-..+.. .....
T Consensus 205 ~dPDiI-~G~N~~~FD~pYL~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~~ 283 (388)
T 1noy_A 205 KRPAIF-TGWNIEGFDVPYIMNRVKMILGERSMKRFSPIGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLP 283 (388)
T ss_dssp SCCSEE-ECSSTTTTHHHHHHHHHHHHHHHHHHGGGSTTSCEEEEECCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCS
T ss_pred CCCCEE-EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 388889-8706788517899999998526421011375676642255402565225642142167899999976303423
Q ss_pred CHHHHHHHHHHHCCCCCC-CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 000887776542002467-5200365654432368999986459999999999
Q gi|254780636|r 116 QHGLKDNLKELLGINISK-AQQSSDWSADDLSDEQLQYAASDVVHLHALRLQF 167 (207)
Q Consensus 116 ~~~L~~L~~~~lg~~ldK-~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l 167 (207)
+.+|.......++..... ......|.... .+.-+.|+..||..+++|.+++
T Consensus 284 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d-~~kli~Yn~~D~~l~~~L~~kl 335 (388)
T 1noy_A 284 SFSLESVAQHETKKGKLPYDGPINKLRETN-HQRYISYNIIDVESVQAIDKIR 335 (388)
T ss_dssp CCSHHHHHHHHHSCCCCCCSSCGGGHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 202888999866887667256666665418-9999999999999999999997