HHsearch results for GI: 254780636 and protein with PDBid: 1vk0_A

Probab=100.00  E-value=8.3e-34  Score=214.46  Aligned_cols=151  Identities=15%  Similarity=0.074  Sum_probs=124.9

Q ss_pred             CCCCCCEEEECCCCCC--------CCCCCEEEEEEEEECCCCEEEECCCC-CCCCCHHHHHHHHCCCCCEEECCCCHHHH
Q ss_conf             2489827997177789--------85445079999841894289974657-78570677677732364023010000168
Q gi|254780636|r   17 ARYVDAIAVDTETLGL--------MPRRDRLCIVQLSPGDGTVDIIRIAA-GQKNAPNLVGMLVDEKREKIFHYGRFDIA   87 (207)
Q Consensus        17 l~~~~~iaiDtEt~~l--------~~~~~~l~LiQl~~~~~~~~l~~~~~-~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~   87 (207)
                      +....+|||||||...        .....++|+||||+++ .|+++++.+ ....++.|+++|+|++|+||||++++|+.
T Consensus        43 ~~~~~~ig~D~EW~~~~~~~~~~~~~~~~~valiQl~t~~-~~~li~l~~~~~~~~~~L~~~L~~~~i~KVG~~i~~D~~  121 (206)
T 1vk0_A           43 LNGNRAVIFDVYWDVGFPETETKTKTSGWSLSSVKLSTRN-LCLFLRLPKPFHDNLKDLYRFFASKFVTFVGVQIEEDLD  121 (206)
T ss_dssp             HHSTTEEEEEEEEECCC------CGGGGCEEEEEEEECSS-EEEEEECCSSCCGGGHHHHHHHTCSSSEEEESSCHHHHH
T ss_pred             HCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC-CEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHH
T ss_conf             2379669998004787766776553357615999998689-389998882111107999999659981599962698899


Q ss_pred             HHHHHHHCCCCCHHHHHHHH-HHHH-HHCCCHHHHHHHHHHHCCCCCCCCE-ECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             88654200000004578988-6521-1000000887776542002467520-0365654432368999986459999999
Q gi|254780636|r   88 VLFYTFGVRVRPVFCTKIAS-RLTR-TYTNQHGLKDNLKELLGINISKAQQ-SSDWSADDLSDEQLQYAASDVVHLHALR  164 (207)
Q Consensus        88 ~L~~~~gi~~~~i~DT~ias-~l~~-~~~~~~~L~~L~~~~lg~~ldK~~q-~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~  164 (207)
                      .|.+++|+.+++++|++..+ .... +...++||+.|++++||+.++|..+ +|+|. ||||++|+.|||.||+++++||
T Consensus       122 ~L~~~~gi~~~~~vDl~~~a~~~~~~~~~~~~~l~~L~~~~lg~~l~K~~~~~s~W~-~pLs~~Qi~YAA~DA~~~~~iy  200 (206)
T 1vk0_A          122 LLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKWE-KAGPEEQLEAAAIEGWLIVNVW  200 (206)
T ss_dssp             HHHHHHCCCCSSEEEHHHHHHHHHTCGGGGGCCHHHHHHHHHCCCCHHHHHHHHTGG-GSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCC-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf             985124976553552569999873254413100999999976986786765214876-8899999999999899999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780636|r  165 LQFTE  169 (207)
Q Consensus       165 ~~l~~  169 (207)
                      ++|.+
T Consensus       201 ~~L~~  205 (206)
T 1vk0_A          201 DQLSD  205 (206)
T ss_dssp             HHHHH
T ss_pred             HHHHC
T ss_conf             99852