HHsearch results for GI: 254780636 and protein with PDBid: 2a1r_A
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase/RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=92.85 E-value=0.18 Score=26.48 Aligned_cols=99 Identities=18% Similarity=0.097 Sum_probs=57.3
Q ss_pred HHCCCCCEEECCCCHHHHHHHHHHH-CCC--------------CCHHHHHHHHHH--HHHHCCCHHHHHHHHHHHCCCC-
Q ss_conf 7323640230100001688865420-000--------------000457898865--2110000008877765420024-
Q gi|254780636|r 70 LVDEKREKIFHYGRFDIAVLFYTFG-VRV--------------RPVFCTKIASRL--TRTYTNQHGLKDNLKELLGINI- 131 (207)
Q Consensus 70 l~d~~i~KV~Hn~~~D~~~L~~~~g-i~~--------------~~i~DT~ias~l--~~~~~~~~~L~~L~~~~lg~~l- 131 (207)
+.+.+...||||+-.|+..+...|- ..| ..++||+..+.- +......-+|..+.+.+-....
T Consensus 277 l~~~~kpiVgHN~~~Dl~~~~~~f~~~LP~~~~eFk~~v~~~FP~i~DTK~l~~~~~~~~~~~~t~L~~l~~~l~~~~~~ 356 (430)
T 2a1r_A 277 IANSGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFN 356 (430)
T ss_dssp HHHHCCEEEESSCHHHHHHHHHHHTCCCCSSHHHHHHHHHHHCSSEEEHHHHHTSTTTTTTCSCCSHHHHHHHTTSTTCC
T ss_pred HHHCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 98659977866428889999987158999789999999998767300437653136644678886689999997206789
Q ss_pred ------CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------675200365654432368999986459999999999999997
Q gi|254780636|r 132 ------SKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQR 173 (207)
Q Consensus 132 ------dK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~ 173 (207)
..+.+..++ ...+.+=|+-|++.|=.++-+|...|..
T Consensus 357 ~p~i~~~~~~~~~~~-----~~~~~HeAGyDA~mTG~vF~~l~~~l~~ 399 (430)
T 2a1r_A 357 PPKVESAEGFPSYDT-----ASEQLHEAGYDAYITGLCFISMANYLGS 399 (430)
T ss_dssp CCCEEECTTCCCC----------CCCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCEECCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 983433766665568-----8998617088999999999999998741