HHsearch results for GI: 254780636 and protein with PDBid: 2hbj_A

>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=100.00  E-value=0  Score=295.35  Aligned_cols=176  Identities=22%  Similarity=0.204  Sum_probs=159.0

Q ss_pred             CCCHHH-HCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHH
Q ss_conf             888578-4248982799717778985445079999841894289974657785706776777323640230100001688
Q gi|254780636|r   10 DIPAEC-AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIAV   88 (207)
Q Consensus        10 dl~~~~-~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~~   88 (207)
                      +|.+.+ .++.++.|||||||++.+++++++||||+|++++ +|++++.........|+++|+|++|+|||||+++|+.+
T Consensus        95 ~L~~~~~~L~~~~~iavDtE~~~~~t~~~~l~LiQi~t~~~-~~liD~l~l~~~l~~L~~ll~d~~I~KV~H~~~~Dl~~  173 (410)
T 2hbj_A           95 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRER-DYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIW  173 (410)
T ss_dssp             HHHHHHHHHTTCSEEEEEEEEECSSSSSCEEEEEEEECSSC-EEEEETTTTTTTGGGGHHHHTCTTSEEEESSCHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEEEECCC-CEEEEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHH
T ss_conf             99999999845991999704778851677068999981897-78985014533589999997499942999557877999


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86542000000045789886521100000088777654200246752003656544323689999864599999999999
Q gi|254780636|r   89 LFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFT  168 (207)
Q Consensus        89 L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~  168 (207)
                      |.+++|+.+.|+||||+|+++++.  .++||+.|+++|||++++|+.|+|||++||||++|+.|||.||+||++||+.|.
T Consensus       174 L~~~~g~~~~~~fDT~ia~~~l~~--~~~sL~~L~~~~l~~~l~K~~q~sDW~~RPL~~~qi~YAa~Dv~~Ll~ly~~L~  251 (410)
T 2hbj_A          174 LQRDLGLYVVGLFDTYHASKAIGL--PRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAAARADTHFLLNIYDQLR  251 (410)
T ss_dssp             HHHHHCCCCSSEEEHHHHHHHHTC--SCCSHHHHHHHHSCCCCCCTTTTSCTTCSSCCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHCCCCCCCCCCHHHHHHHCCC--CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             998457567872026999998098--875699999987366656413342004555879999999853788999999999


Q ss_pred             HHHHHCCCHHHHHHHHHHHH
Q ss_conf             99997491899999996400
Q gi|254780636|r  169 EKLQRLGRSDLATSCCNFLM  188 (207)
Q Consensus       169 ~~L~~~~~~~~~~~e~~~l~  188 (207)
                      ++|.+.|+++|+.+||+.+.
T Consensus       252 ~~L~~~~~l~~~~ee~~~~~  271 (410)
T 2hbj_A          252 NKLIESNKLAGVLYESRNVA  271 (410)
T ss_dssp             HHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHH
T ss_conf             99997666589999999999