HHsearch results for GI: 254780636 and protein with PDBid: 2hbj_A
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=100.00 E-value=0 Score=295.35 Aligned_cols=176 Identities=22% Similarity=0.204 Sum_probs=159.0
Q ss_pred CCCHHH-HCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHH
Q ss_conf 888578-4248982799717778985445079999841894289974657785706776777323640230100001688
Q gi|254780636|r 10 DIPAEC-AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIAV 88 (207)
Q Consensus 10 dl~~~~-~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~~ 88 (207)
+|.+.+ .++.++.|||||||++.+++++++||||+|++++ +|++++.........|+++|+|++|+|||||+++|+.+
T Consensus 95 ~L~~~~~~L~~~~~iavDtE~~~~~t~~~~l~LiQi~t~~~-~~liD~l~l~~~l~~L~~ll~d~~I~KV~H~~~~Dl~~ 173 (410)
T 2hbj_A 95 ELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRER-DYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIW 173 (410)
T ss_dssp HHHHHHHHHTTCSEEEEEEEEECSSSSSCEEEEEEEECSSC-EEEEETTTTTTTGGGGHHHHTCTTSEEEESSCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEEEECCC-CEEEEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHH
T ss_conf 99999999845991999704778851677068999981897-78985014533589999997499942999557877999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86542000000045789886521100000088777654200246752003656544323689999864599999999999
Q gi|254780636|r 89 LFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFT 168 (207)
Q Consensus 89 L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~ 168 (207)
|.+++|+.+.|+||||+|+++++. .++||+.|+++|||++++|+.|+|||++||||++|+.|||.||+||++||+.|.
T Consensus 174 L~~~~g~~~~~~fDT~ia~~~l~~--~~~sL~~L~~~~l~~~l~K~~q~sDW~~RPL~~~qi~YAa~Dv~~Ll~ly~~L~ 251 (410)
T 2hbj_A 174 LQRDLGLYVVGLFDTYHASKAIGL--PRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAAARADTHFLLNIYDQLR 251 (410)
T ss_dssp HHHHHCCCCSSEEEHHHHHHHHTC--SCCSHHHHHHHHSCCCCCCTTTTSCTTCSSCCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHCCC--CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998457567872026999998098--875699999987366656413342004555879999999853788999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHH
Q ss_conf 99997491899999996400
Q gi|254780636|r 169 EKLQRLGRSDLATSCCNFLM 188 (207)
Q Consensus 169 ~~L~~~~~~~~~~~e~~~l~ 188 (207)
++|.+.|+++|+.+||+.+.
T Consensus 252 ~~L~~~~~l~~~~ee~~~~~ 271 (410)
T 2hbj_A 252 NKLIESNKLAGVLYESRNVA 271 (410)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHH
T ss_conf 99997666589999999999