HHsearch results for GI: 254780636 and protein with PDBid: 2hhv_A
>2hhv_A DNA polymerase I; DNA replication, klenow fragment, protein- DNA complex, O6-methyl-guanine, transferase/DNA complex; HET: DNA 6OG SUC; 1.55A {Geobacillus stearothermophilus} SCOP: c.55.3.5 e.8.1.1 PDB: 2hhs_A* 2hht_A* 2hhu_A* 2hhq_A* 2hhx_A* 2hw3_A* 1nk4_A* 1l3t_A* 1l3u_A* 1l3v_A* 1l5u_A* 1njw_A* 1l3s_A* 1njy_A* 1njz_A* 1nk0_A* 1njx_A* 1nk5_A* 1nk6_A* 1nk7_A* ...
Probab=100.00 E-value=1.2e-34 Score=219.40 Aligned_cols=180 Identities=16% Similarity=0.100 Sum_probs=153.0
Q ss_pred CCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCC
Q ss_conf 98279971777898544507999984189428997465778570677677732364023010000168886542000000
Q gi|254780636|r 20 VDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIAVLFYTFGVRVRP 99 (207)
Q Consensus 20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~~L~~~~gi~~~~ 99 (207)
++.+||||||+|++++.+++++|++|.+++.+|+++.... ..+.|+++|+|+++.||+||++||+.+|.++ |+.+++
T Consensus 17 ~~~~a~~~e~~~~~~~~~~ivGis~~~~~~~~~y~p~~~~--~~~~l~~~l~d~~~~ki~hN~k~D~~~L~~~-Gi~l~g 93 (580)
T 2hhv_A 17 ADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETAL--ADPQFVAWLGDETKKKSMFDSKRAAVALKWK-GIELCG 93 (580)
T ss_dssp CSEEEEEEECCSSSCTTCCCCEEEEEETTEEEEECHHHHT--TCHHHHHHHHCTTSEEEESSHHHHHHHHHTT-TCCCCC
T ss_pred CCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCC--CHHHHHHHHCCCCCCEEEEEHHHHHHHHHHC-CCCCCC
T ss_conf 7884799976999735072899999966977999453546--6489999966999865885279999999978-882799
Q ss_pred H-HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 0-457898865211000000887776542002467520036---565443236899998645999999999999999749
Q gi|254780636|r 100 V-FCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSD---WSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLG 175 (207)
Q Consensus 100 i-~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~Sd---W~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~ 175 (207)
+ ||||||++++++....++|+.+++++++..+.+...... +...|-.+....|||.||.++++||+.|.++|.+.+
T Consensus 94 ~~~DTmiaa~ll~~~~~~~~L~~l~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~Ya~~Da~~t~~L~~~l~~~l~~~~ 173 (580)
T 2hhv_A 94 VSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNE 173 (580)
T ss_dssp EEEEHHHHHHHHCGGGCCCSHHHHHHTTTCCSSCCHHHHHCSGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73289999997599999888999999867998784887518771002632799999999999999999999999975434
Q ss_pred CHHHHH-HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 189999-9996400689998667988884
Q gi|254780636|r 176 RSDLAT-SCCNFLMDRAELDLLGWENVDI 203 (207)
Q Consensus 176 ~~~~~~-~e~~~l~~~~~me~~g~~~~~~ 203 (207)
+..+|. .|++++|++++||.+|++ +|.
T Consensus 174 l~~~~~~iE~pl~~vL~~ME~~Gi~-vD~ 201 (580)
T 2hhv_A 174 QDRLLVELEQPLSSILAEMEFAGVK-VDT 201 (580)
T ss_dssp CHHHHHTTHHHHHHHHHHHHHHCEE-ECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCEE-EEH
T ss_conf 3314888997789999999745988-708