HHsearch results for GI: 254780636 and protein with PDBid: 2hhv_A

>2hhv_A DNA polymerase I; DNA replication, klenow fragment, protein- DNA complex, O6-methyl-guanine, transferase/DNA complex; HET: DNA 6OG SUC; 1.55A {Geobacillus stearothermophilus} SCOP: c.55.3.5 e.8.1.1 PDB: 2hhs_A* 2hht_A* 2hhu_A* 2hhq_A* 2hhx_A* 2hw3_A* 1nk4_A* 1l3t_A* 1l3u_A* 1l3v_A* 1l5u_A* 1njw_A* 1l3s_A* 1njy_A* 1njz_A* 1nk0_A* 1njx_A* 1nk5_A* 1nk6_A* 1nk7_A* ...
Probab=100.00  E-value=1.2e-34  Score=219.40  Aligned_cols=180  Identities=16%  Similarity=0.100  Sum_probs=153.0

Q ss_pred             CCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCC
Q ss_conf             98279971777898544507999984189428997465778570677677732364023010000168886542000000
Q gi|254780636|r   20 VDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFHYGRFDIAVLFYTFGVRVRP   99 (207)
Q Consensus        20 ~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV~Hn~~~D~~~L~~~~gi~~~~   99 (207)
                      ++.+||||||+|++++.+++++|++|.+++.+|+++....  ..+.|+++|+|+++.||+||++||+.+|.++ |+.+++
T Consensus        17 ~~~~a~~~e~~~~~~~~~~ivGis~~~~~~~~~y~p~~~~--~~~~l~~~l~d~~~~ki~hN~k~D~~~L~~~-Gi~l~g   93 (580)
T 2hhv_A           17 ADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETAL--ADPQFVAWLGDETKKKSMFDSKRAAVALKWK-GIELCG   93 (580)
T ss_dssp             CSEEEEEEECCSSSCTTCCCCEEEEEETTEEEEECHHHHT--TCHHHHHHHHCTTSEEEESSHHHHHHHHHTT-TCCCCC
T ss_pred             CCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCC--CHHHHHHHHCCCCCCEEEEEHHHHHHHHHHC-CCCCCC
T ss_conf             7884799976999735072899999966977999453546--6489999966999865885279999999978-882799


Q ss_pred             H-HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             0-457898865211000000887776542002467520036---565443236899998645999999999999999749
Q gi|254780636|r  100 V-FCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSD---WSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLG  175 (207)
Q Consensus       100 i-~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~Sd---W~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~  175 (207)
                      + ||||||++++++....++|+.+++++++..+.+......   +...|-.+....|||.||.++++||+.|.++|.+.+
T Consensus        94 ~~~DTmiaa~ll~~~~~~~~L~~l~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~Ya~~Da~~t~~L~~~l~~~l~~~~  173 (580)
T 2hhv_A           94 VSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNE  173 (580)
T ss_dssp             EEEEHHHHHHHHCGGGCCCSHHHHHHTTTCCSSCCHHHHHCSGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             73289999997599999888999999867998784887518771002632799999999999999999999999975434


Q ss_pred             CHHHHH-HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             189999-9996400689998667988884
Q gi|254780636|r  176 RSDLAT-SCCNFLMDRAELDLLGWENVDI  203 (207)
Q Consensus       176 ~~~~~~-~e~~~l~~~~~me~~g~~~~~~  203 (207)
                      +..+|. .|++++|++++||.+|++ +|.
T Consensus       174 l~~~~~~iE~pl~~vL~~ME~~Gi~-vD~  201 (580)
T 2hhv_A          174 QDRLLVELEQPLSSILAEMEFAGVK-VDT  201 (580)
T ss_dssp             CHHHHHTTHHHHHHHHHHHHHHCEE-ECH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCEE-EEH
T ss_conf             3314888997789999999745988-708