HHsearch results for GI: 254780636 and protein with PDBid: 2is3_A
>2is3_A Ribonuclease T; RNAse, exoribonuclease, exonuclease, hydrolase, stable RNA maturation, tRNA END-turnover; 3.10A {Escherichia coli K12}
Probab=99.01 E-value=9.9e-10 Score=74.53 Aligned_cols=142 Identities=18% Similarity=0.242 Sum_probs=85.1
Q ss_pred CCCCCEEEECCCCCCCCCCCEEEEEEEEE------CCCC-----E---EEECCCCCCC---------------------C
Q ss_conf 48982799717778985445079999841------8942-----8---9974657785---------------------7
Q gi|254780636|r 18 RYVDAIAVDTETLGLMPRRDRLCIVQLSP------GDGT-----V---DIIRIAAGQK---------------------N 62 (207)
Q Consensus 18 ~~~~~iaiDtEt~~l~~~~~~l~LiQl~~------~~~~-----~---~l~~~~~~~~---------------------~ 62 (207)
++..+|.||+||||++|.++++ ||+|. +++. . ++.+...... .
T Consensus 15 ~~~~~Vv~D~ETTGl~p~~d~I--IeIgav~i~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~i~gi~~~~~~~~~~~~ 92 (215)
T 2is3_A 15 RGFYPVVIDVETAGFNAKTDAL--LEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSE 92 (215)
T ss_dssp TTEEEEEEEEEESSSCTTTSCE--EEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCCCCHHHHHHHCCCTTCSTTCCBCH
T ss_pred CCCCEEEEEEECCCCCCCCCCC--EEEEEEEEEECCCCCEECCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCH
T ss_conf 2898599983799999999832--89999998956888683353599985268899988568760252138787079861
Q ss_pred CHHHHHHHHC----------CCCCEEECCCCHHHHHHHHHHH---CC-----CCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 0677677732----------3640230100001688865420---00-----0000457898865211000000887776
Q gi|254780636|r 63 APNLVGMLVD----------EKREKIFHYGRFDIAVLFYTFG---VR-----VRPVFCTKIASRLTRTYTNQHGLKDNLK 124 (207)
Q Consensus 63 ~~~L~~ll~d----------~~i~KV~Hn~~~D~~~L~~~~g---i~-----~~~i~DT~ias~l~~~~~~~~~L~~L~~ 124 (207)
.+.+.++++- .....|+||++||..+|.+.+. +. +...+||+..++.. .++++|..++.
T Consensus 93 ~~~~~~~~~~i~~~~~~~~~~~~~lVaHNa~FD~~fL~~~~~r~~l~~~~~~~~~~iDt~~~~~~~---~~~~~L~~l~~ 169 (215)
T 2is3_A 93 YEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLA---LGQTVLSKACQ 169 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEETTHHHHHHHHHHHHHHHTCTTCCEEEEEEEEHHHHHHHH---HSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH---HCCCCHHHHHH
T ss_conf 253599999999998763146550100376876999999999839998865330167799999887---36324999999
Q ss_pred HHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 5420024675200365654432368999986459999999999999997491899
Q gi|254780636|r 125 ELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDL 179 (207)
Q Consensus 125 ~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~~~~ 179 (207)
+ +|++++ ..+-+=|..||..+.+||.++.+++++.+.+.+
T Consensus 170 ~-~~i~~~--------------~~~~H~Al~Da~~ta~lf~~l~~~~~~~g~~~~ 209 (215)
T 2is3_A 170 T-AGMDFD--------------STQAHSALYDTERTAVLFCEIVNRWKRLGGWPL 209 (215)
T ss_dssp H-TTCCCC--------------TTTTTCHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred H-CCCCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8-599999--------------997678699999999999999999997589999