RPSBLAST alignment for GI: 254780636 and conserved domain: TIGR01388

>gnl|CDD|130455 TIGR01388, rnd, ribonuclease D. This model describes ribonuclease D, a 3'-exonuclease shown to act on tRNA both in vitro and when overexpressed in vivo. Trusted members of this family are restricted to the Proteobacteria; Aquifex, Mycobacterial, and eukaryotic homologs are not full-length homologs. Ribonuclease D is not essential in E. coli and is deleterious when overexpressed. Its precise biological role is still unknown. Length = 367
 Score = 92.5 bits (230), Expect = 7e-20
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%)

Query: 7   HEGDIPAEC-AARYVDAIAVDTETLGLMPRRDR-----LCIVQLSPGDGTVDIIRIAAGQ 60
            + ++   C A R    +A+DTE +     R+R     L ++Q++ G+    I  +    
Sbjct: 4   TDDELATVCEAVRTFPFVALDTEFV-----RERTFWPQLGLIQVADGEQLALIDPLVIID 58

Query: 61  KNAPNLVGMLVDEKREKIFHYGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLK 120
            +   L  +L DE   K+ H    D+ V    FG   +P+F T+IA+     +    G  
Sbjct: 59  WSP--LKELLRDESVVKVLHAASEDLEVFLNLFGELPQPLFDTQIAAAFC-GFGMSMGYA 115

Query: 121 DNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDLA 180
             ++E+LG+ + K++  +DW A  L+D QL+YAA+DV +L  L  +  E+L+  GR    
Sbjct: 116 KLVQEVLGVELDKSESRTDWLARPLTDAQLEYAAADVTYLLPLYAKLMERLEESGRLAWL 175

Query: 181 TSCCNFLMDRAELD 194
              C  L DR    
Sbjct: 176 EEECTLLTDRRTYV 189