RPSBLAST alignment of GI: 254780636 and protein with PDBid: 3cym
>3cym_A Uncharacterized protein BAD_0989; structural genomics, unknown function, ribonuclease D, exonuclease; 2.10A {Bifidobacterium adolescentis ATCC15703} Length = 440
Score = 134 bits (338), Expect = 2e-32
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 4/175 (2%)
Query: 17 ARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGML-VDEKR 75
A ++A D E +VQ + ++ A +
Sbjct: 35 ASSHGSLAADAERASGFRYGHEDWLVQFKRDGAGIGLLDPQALAAAGADWNDFNRAVGDA 94
Query: 76 EKIFHYGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQ 135
I H D+ G+ + +F T+IA+RL + GL + LG+ ++K
Sbjct: 95 VWILHDSLQDLPGF-DELGMEPQRLFDTEIAARLL--GLKRFGLAAVTEHFLGLTLAKEH 151
Query: 136 QSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDLATSCCNFLMDR 190
++DWS L + YAA DV L L + +L+R G+ + A ++ +
Sbjct: 152 SAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKMEWAQEEFDYALKE 206