RPSBLAST alignment of GI: 254780636 and SCOP domain: d1kfsa1

Alignment

 Score = 65.1 bits (157), Expect = 4e-12
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 16/169 (9%)

Query: 21  DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGM----------L 70
              A DTET  L      L  +  +   G    I +A    +AP+ +            L
Sbjct: 27  PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 86

Query: 71  VDEKREKIFHYGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGIN 130
            DEK  K+    ++D  +L           F T + S +  +   +H +    +  L   
Sbjct: 87  EDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 146

Query: 131 ISKAQQSSDWSADDLS------DEQLQYAASDVVHLHALRLQFTEKLQR 173
               ++ +    + L+      +E  +YAA D      L L+    LQ+
Sbjct: 147 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 195

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: DnaQ-like 3'-5' exonuclease
domain: Exonuclease domain of prokaryotic DNA polymerase
species: Escherichia coli [TaxId: 562]