RPSBLAST alignment of GI: 254780636 and SCOP domain: d1vk0a_

Alignment

 Score = 88.5 bits (219), Expect = 3e-19
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 22  AIAVDTETLGLMPRRD--------RLCIVQLSPGDGTVDIIRI-AAGQKNAPNLVGMLVD 72
           A+  D       P  +         L  V+LS  +  +  +R+      N  +L      
Sbjct: 48  AVIFDVYWDVGFPETETKTKTSGWSLSSVKLSTRNLCL-FLRLPKPFHDNLKDLYRFFAS 106

Query: 73  EKREKIFHYGRFDIAVLFYTFGVRVRPVF-CTKIASRLT-RTYTNQHGLKDNLKELLGIN 130
           +    +      D+ +L    G+ +R      K+A+           G ++    +L  +
Sbjct: 107 KFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSD 166

Query: 131 ISKA-QQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEK 170
           + +     + W      +EQL+ AA +   +  +  Q +++
Sbjct: 167 LGQLDSIEAKWE-KAGPEEQLEAAAIEGWLIVNVWDQLSDE 206

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: DnaQ-like 3'-5' exonuclease
domain: Hypothetical protein AT5G06450
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]