RPSBLAST alignment of GI: 254780636 and SCOP domain: d2hbka2

Alignment

 Score = 94.9 bits (235), Expect = 5e-21
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 3/170 (1%)

Query: 21  DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFH 80
             IAVD E          +C++Q+S  +    ++     ++N   L  +  +    K+FH
Sbjct: 105 KEIAVDLEHHDYRSYYGIVCLMQISTRERDY-LVDTLKLRENLHILNEVFTNPSIVKVFH 163

Query: 81  YGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDW 140
               DI  L    G+ V  +F T  AS+       +H L   L+       SK  Q +DW
Sbjct: 164 GAFMDIIWLQRDLGLYVVGLFDTYHASKAIGLP--RHSLAYLLENFANFKTSKKYQLADW 221

Query: 141 SADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDLATSCCNFLMDR 190
               LS      A +D   L  +  Q   KL    +          +  R
Sbjct: 222 RIRPLSKPMTAAARADTHFLLNIYDQLRNKLIESNKLAGVLYESRNVAKR 271

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: DnaQ-like 3'-5' exonuclease
domain: Exosome complex exonuclease RRP6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]