RPSBLAST alignment of GI: 254780636 and SCOP domain: d2hhva1

Alignment
>d2hhva1 c.55.3.5 (A:298-468) Exonuclease domain of prokaryotic DNA polymerase {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]} Length = 171
 Score = 75.6 bits (185), Expect = 3e-15
 Identities = 20/155 (12%), Positives = 40/155 (25%), Gaps = 5/155 (3%)

Query: 21  DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFH 80
           D  A+  E +          IV ++  +               P  V  L DE ++K   
Sbjct: 17  DKAALVVEVVEENYHDAP--IVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMF 74

Query: 81  YGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDW 140
             +     L +         F   +A+ L         +    K      +   +     
Sbjct: 75  DSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGK 134

Query: 141 SADDLS---DEQLQYAASDVVHLHALRLQFTEKLQ 172
            A           ++       +  L   F ++L+
Sbjct: 135 GAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELR 169

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: DnaQ-like 3'-5' exonuclease
domain: Exonuclease domain of prokaryotic DNA polymerase
species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]