HHsearch alignment for GI: 254780638 and conserved domain: PRK10266
>PRK10266 curved DNA-binding protein CbpA; Provisional.
Probab=98.14 E-value=9.4e-06 Score=61.85 Aligned_cols=40 Identities=40% Similarity=0.792 Sum_probs=21.0
Q ss_pred CCCEEECCCCCCCCEEEECCEECCCCCCCCCCCEEEEEEE
Q ss_conf 2310116851778878988810200689886527999999
Q gi|254780638|r 300 HSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQV 339 (384)
Q Consensus 300 ~i~i~i~~~~~~~~~~~i~g~G~p~~~~~~rGdl~i~~~v 339 (384)
T Consensus 159 ~~~v~IP~G~~~G~~i~~~G~G~~~~~g~~~GDL~v~i~v 198 (306)
T PRK10266 159 TLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHI 198 (306)
T ss_pred EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
T ss_conf 7988719987789789973588878888967637999997