HHsearch alignment for GI: 254780638 and conserved domain: TIGR01213

>TIGR01213 TIGR01213 conserved hypothetical protein TIGR01213; InterPro: IPR005912 The members of this family of conserved hypothetical proteins show a low level of similarity to several predicted RNA pseudouridine synthases. All trusted members of this family are archaeal. Several eukaryotic homologs lack N-terminal homology including two CXXC motifs. .
Probab=96.90  E-value=0.00042  Score=50.04  Aligned_cols=68  Identities=25%  Similarity=0.572  Sum_probs=51.1

Q ss_pred             CCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCHHHHHCCC--CCCCEEECCCCCC
Q ss_conf             1210011001246861666565546983541200112100011100000110011--4850120367765
Q gi|254780638|r  178 GRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVD--DGTRIRLSGEGGA  245 (384)
Q Consensus       178 G~~~~~~~~~~~~~~~C~~C~G~g~i~~~~c~~C~G~g~~~~~~~~~I~Ip~G~~--~G~~i~~~g~G~~  245 (384)
T Consensus       201 GRYRKL~RgIPQT~WP~r~C~G~GtlvdsPCe~CnyTGk~y~~sve~~i~~p~~~~~~G~~~~fHGaGRE  270 (450)
T TIGR01213       201 GRYRKLVRGIPQTRWPCRKCRGKGTLVDSPCERCNYTGKLYPESVEELIAKPFLKATGGTDAVFHGAGRE  270 (450)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCEEEEEEECCCC
T ss_conf             1232321788888886568884143515888777888775874068882014664228806999625664