HHsearch alignment for GI: 254780638 and conserved domain: pfam01556

>pfam01556 DnaJ_C DnaJ C terminal region. This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress.
Probab=99.92  E-value=2.9e-25  Score=201.86  Aligned_cols=100  Identities=52%  Similarity=0.935  Sum_probs=95.8

Q ss_pred             CCEEEEEECCCCCCEEEECCCCEEEEEECHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCEECCCCCC-CCCC
Q ss_conf             641575310346842864148469998466651354248851678882310116851778878988810200689-8865
Q gi|254780638|r  253 GDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINS-GRKG  331 (384)
Q Consensus       253 GDl~i~i~~~~h~~f~r~g~dL~~~~~I~l~eal~G~~~~i~tldG~~i~i~i~~~~~~~~~~~i~g~G~p~~~~-~~rG  331 (384)
T Consensus         1 GDL~v~i~~~~h~~f~r~G~dL~~~~~I~~~~al~G~~~~i~~ldG~~i~i~ip~~~~~g~~~~i~g~Gmp~~~~~~~~G   80 (101)
T pfam01556         1 GDLYVVIKVKPHPVFKRDGNDLYVTLPISLKEALLGGTVEVPTLDGRKLKIKIPAGTQPGDVLRIKGKGMPIFKGSGGRG   80 (101)
T ss_pred             CCEEEEEEECCCCCEEEECCEEEEEECCCHHHHHCCCCEEECCCCCCEEEEECCCEECCCCEEEECCCCCCCCCCCCCCC
T ss_conf             99999999947999899799899996589899725882564258996778710990258968986798786079999846


Q ss_pred             CEEEEEEEECCCCCCHHHHHH
Q ss_conf             279999999298999999999
Q gi|254780638|r  332 DLYVQVQVETPQKLNKRQREL  352 (384)
Q Consensus       332 dl~i~~~v~~P~~Ls~~qk~l  352 (384)
T Consensus        81 dL~i~~~v~~P~~ls~~qk~l  101 (101)
T pfam01556        81 DLIVTFNVKIPKKLSSEQKEL  101 (101)
T ss_pred             CEEEEEEEECCCCCCHHHHCC
T ss_conf             899999999799999899639