HHsearch alignment for GI: 254780640 and conserved domain: COG0419
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair].
Probab=99.87 E-value=2.3e-22 Score=131.61 Aligned_cols=82 Identities=32% Similarity=0.560 Sum_probs=74.5
Q ss_pred EEEEEEEEECEECCCCCEEEE--CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC---CCCHHHHHHCCCCCCCEEEEE
Q ss_conf 899899995401368317998--689869999079865789999999985797756---433133310244574127899
Q gi|254780640|r 27 FKLLDIEISHFRGFTEIQKIE--FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR---RKHGDSIKKRSIKTPMPMCMA 101 (110)
Q Consensus 27 ~kl~~i~i~nFr~f~~~~~i~--f~~~~~~i~G~Ng~GKStil~ai~~~l~g~~~~---~~~~d~i~~~s~~~pi~l~~~ 101 (110)
T Consensus 1 M~i~~L~L~Nf~S~~~-~~~~~~f~~gi~lI~G~nGsGKSSIldAI~~ALyG~~~~~~~~~~~~~i~~g~~~~~V~l~F~ 79 (908)
T COG0419 1 MKILRLRLKNFRSFKD-IDIEKLFDSGIFLIVGPNGAGKSSILDAITFALYGKTPRLGAFSLDDLIRAGEKSASVELEFE 79 (908)
T ss_pred CCCCEEEEECCCCCCC-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE
T ss_conf 9860467546656555-622315788837998999997889999999998289877544015589865886079999999
Q ss_pred ECCCEEEE
Q ss_conf 62855673
Q gi|254780640|r 102 VPRCKYQL 109 (110)
Q Consensus 102 v~~~~y~~ 109 (110)
T Consensus 80 ~~g~~Y~i 87 (908)
T COG0419 80 VNGKKYRI 87 (908)
T ss_pred ECCEEEEE
T ss_conf 89979999