HHsearch alignment for GI: 254780640 and conserved domain: COG1196
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning].
Probab=99.78 E-value=4.1e-19 Score=115.34 Aligned_cols=78 Identities=24% Similarity=0.390 Sum_probs=66.6
Q ss_pred EEEEEEEEECEECCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC----HHHHHHCCCC------CCC
Q ss_conf 899899995401368317998689869999079865789999999985797756433----1333102445------741
Q gi|254780640|r 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----GDSIKKRSIK------TPM 96 (110)
Q Consensus 27 ~kl~~i~i~nFr~f~~~~~i~f~~~~~~i~G~Ng~GKStil~ai~~~l~g~~~~~~~----~d~i~~~s~~------~pi 96 (110)
T Consensus 1 m~lk~i~l~gFKSF~~~~~i~f~~~~t~IvGPNGSGKSNI~DAi~fVLG~~s~k~lRa~~~~DlIf~g~~~r~~~~~A~V 80 (1163)
T COG1196 1 MYLKRIELKGFKSFADPTEINFSPGFTAIVGPNGSGKSNIVDAIRFVLGEQSAKNLRASKMSDLIFAGSGNRKPANYAEV 80 (1163)
T ss_pred CCEEEEEEECCEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCCCCCCCCCEEEE
T ss_conf 91379998785624783686169996168899988668899999998389502110425726675188987888770389
Q ss_pred EEEEEECC
Q ss_conf 27899628
Q gi|254780640|r 97 PMCMAVPR 104 (110)
Q Consensus 97 ~l~~~v~~ 104 (110)
T Consensus 81 ~l~fdN~d 88 (1163)
T COG1196 81 ELTFDNSD 88 (1163)
T ss_pred EEEEECCC
T ss_conf 99986788