HHsearch alignment for GI: 254780640 and conserved domain: COG2805
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=94.85 E-value=0.026 Score=31.30 Aligned_cols=51 Identities=24% Similarity=0.290 Sum_probs=33.1
Q ss_pred EEEEEEEEEEEECEECCCCCE----EEECCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 016899899995401368317----998689869999079865789999999985
Q gi|254780640|r 24 KLIFKLLDIEISHFRGFTEIQ----KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 (110)
Q Consensus 24 ~~~~kl~~i~i~nFr~f~~~~----~i~f~~~~~~i~G~Ng~GKStil~ai~~~l 74 (110)
T Consensus 95 a~vlR~Ip~~i~~~e~LglP~i~~~~~~~~~GLILVTGpTGSGKSTTlAamId~i 149 (353)
T COG2805 95 ALVLRLIPSKIPTLEELGLPPIVRELAESPRGLILVTGPTGSGKSTTLAAMIDYI 149 (353)
T ss_pred EEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7997616766899878199779999982879669986799996787999999998