HHsearch alignment for GI: 254780640 and conserved domain: KOG0964
>KOG0964 consensus.
Probab=99.32 E-value=1.7e-12 Score=82.32 Aligned_cols=78 Identities=19% Similarity=0.348 Sum_probs=59.9
Q ss_pred EEEEEEEEECEECCCCCEEEE-CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC---HHHHHHCCCCC----CCEE
Q ss_conf 899899995401368317998-689869999079865789999999985797756433---13331024457----4127
Q gi|254780640|r 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH---GDSIKKRSIKT----PMPM 98 (110)
Q Consensus 27 ~kl~~i~i~nFr~f~~~~~i~-f~~~~~~i~G~Ng~GKStil~ai~~~l~g~~~~~~~---~d~i~~~s~~~----pi~l 98 (110)
T Consensus 1 MyIk~ViI~GFrSYrd~tvv~~fSph~NvIVGrNGSGKSNFF~AIrFVLSDey~hLk~E~R~gLlHEGsG~~V~sA~VEI 80 (1200)
T KOG0964 1 MYIKQVIIKGFRSYRDETVVDPFSPHHNVIVGRNGSGKSNFFHAIRFVLSDEYSHLKREERQGLLHEGSGAMVMSASVEI 80 (1200)
T ss_pred CCEEEEEECCCHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 93577664142111225356788987655864798872125787533012404223889875466258886447887999
Q ss_pred EEEECC
Q ss_conf 899628
Q gi|254780640|r 99 CMAVPR 104 (110)
Q Consensus 99 ~~~v~~ 104 (110)
T Consensus 81 vF~nsd 86 (1200)
T KOG0964 81 VFDNSD 86 (1200)
T ss_pred EEECCC
T ss_conf 971764