HHsearch alignment for GI: 254780640 and conserved domain: PRK00635
>PRK00635 excinuclease ABC subunit A; Provisional.
Probab=95.01 E-value=0.046 Score=30.07 Aligned_cols=40 Identities=30% Similarity=0.498 Sum_probs=24.4
Q ss_pred EEEEEEEEEECEECCCCCEEEECCCCEEEEEECCCCCHHHHHH
Q ss_conf 6899899995401368317998689869999079865789999
Q gi|254780640|r 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 (110)
Q Consensus 26 ~~kl~~i~i~nFr~f~~~~~i~f~~~~~~i~G~Ng~GKStil~ 68 (110)
T Consensus 600 ~i~i~ga~~nNLk~i-~-v~iPlg-~l~~VTGVSGSGKSTLi~ 639 (1809)
T PRK00635 600 TLTLSHATIHNLKDL-T-ISLPLG-RLTVVTGVSGSGKSSLIN 639 (1809)
T ss_pred EEEEECCCCCCCCCC-C-EEECCC-CEEEEECCCCCCHHHHHH
T ss_conf 389804652169875-5-350698-789995889999788488