HHsearch alignment for GI: 254780640 and conserved domain: PRK00635

>PRK00635 excinuclease ABC subunit A; Provisional.
Probab=95.01  E-value=0.046  Score=30.07  Aligned_cols=40  Identities=30%  Similarity=0.498  Sum_probs=24.4

Q ss_pred             EEEEEEEEEECEECCCCCEEEECCCCEEEEEECCCCCHHHHHH
Q ss_conf             6899899995401368317998689869999079865789999
Q gi|254780640|r   26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE   68 (110)
Q Consensus        26 ~~kl~~i~i~nFr~f~~~~~i~f~~~~~~i~G~Ng~GKStil~   68 (110)
T Consensus       600 ~i~i~ga~~nNLk~i-~-v~iPlg-~l~~VTGVSGSGKSTLi~  639 (1809)
T PRK00635        600 TLTLSHATIHNLKDL-T-ISLPLG-RLTVVTGVSGSGKSSLIN  639 (1809)
T ss_pred             EEEEECCCCCCCCCC-C-EEECCC-CEEEEECCCCCCHHHHHH
T ss_conf             389804652169875-5-350698-789995889999788488