HHsearch alignment for GI: 254780640 and conserved domain: PRK13898
>PRK13898 type IV secretion system ATPase VirB4; Provisional.
Probab=95.43 E-value=0.021 Score=31.81 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=26.7
Q ss_pred EEEECC---CCEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 799868---9869999079865789999999985797
Q gi|254780640|r 44 QKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 (110)
Q Consensus 44 ~~i~f~---~~~~~i~G~Ng~GKStil~ai~~~l~g~ 77 (110)
T Consensus 437 y~fNfH~~d~GHtlI~G~TGsGKTtl~~fL~aq~~ky 473 (800)
T PRK13898 437 FYFNFHVRDVGHTLIIGPTGAGKTVLMNFLCAQAMKF 473 (800)
T ss_pred EEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 7986745987756998999998999999999998754