HHsearch alignment for GI: 254780640 and conserved domain: TIGR02237
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=92.41 E-value=0.093 Score=28.57 Aligned_cols=25 Identities=28% Similarity=0.413 Sum_probs=19.0
Q ss_pred EEEEEECCCCCHHHHH--HHHHHHHCC
Q ss_conf 6999907986578999--999998579
Q gi|254780640|r 52 LTIVNGQNGYGKSSLS--EAIEWLFYG 76 (110)
Q Consensus 52 ~~~i~G~Ng~GKStil--~ai~~~l~g 76 (110)
T Consensus 14 iTQiYGp~G~GKTn~c~~~a~~a~~~G 40 (223)
T TIGR02237 14 ITQIYGPPGSGKTNICLILAVNAARQG 40 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 889875899867899999999998618