HHsearch alignment for GI: 254780640 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=99.71 E-value=1.8e-17 Score=107.13 Aligned_cols=52 Identities=23% Similarity=0.523 Sum_probs=48.9
Q ss_pred EEEEEEEEECEECCCCCEEEECC----CCEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89989999540136831799868----98699990798657899999999857977
Q gi|254780640|r 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 (110)
Q Consensus 27 ~kl~~i~i~nFr~f~~~~~i~f~----~~~~~i~G~Ng~GKStil~ai~~~l~g~~ 78 (110)
T Consensus 1 M~l~~i~l~Nf~~y~g~~~~~~~~~~~k~i~li~G~NG~GKTTll~Ai~~~LYG~~ 56 (650)
T TIGR03185 1 MIIKQLTLENFGAYRGRQTFDLSPSSPKPIILIGGLNGAGKTTLLDAIQLGLYGKR 56 (650)
T ss_pred CEEEEEEEEECEEECCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 96348999706431897136578999998799977999978999999999956951