HHsearch alignment for GI: 254780640 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.

Probab=96.77  E-value=0.0017  Score=37.28  Aligned_cols=43  Identities=16%  Similarity=0.196  Sum_probs=29.9

Q ss_pred             EEEEEECEECCCCCEEEECCC-CEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             899995401368317998689-86999907986578999999998
Q gi|254780640|r   30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWL   73 (110)
Q Consensus        30 ~~i~i~nFr~f~~~~~i~f~~-~~~~i~G~Ng~GKStil~ai~~~   73 (110)
T Consensus         6 ls~~fg~~~aL~-~vsl~i~~Gei~~LvG~sGsGKSTL~~~l~Gl   49 (520)
T TIGR03269         6 LTKKFDGKEVLK-NISFTIEEGEVLGILGRSGAGKSVLMHVLRGM   49 (520)
T ss_pred             EEEEECCEEEEC-CEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             999989999886-71779999989999999996999999999651