HHsearch alignment for GI: 254780640 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=95.64 E-value=0.01 Score=33.36 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=23.9
Q ss_pred EEECCC-CEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 998689-8699990798657899999999857
Q gi|254780640|r 45 KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 (110)
Q Consensus 45 ~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l~ 75 (110)
T Consensus 485 sl~i~~Ge~vaIvG~sGsGKSTL~kll~Gl~~ 516 (694)
T TIGR03375 485 SLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ 516 (694)
T ss_pred HHEECCCCEEEEEECCCCCHHHHHHHHCCCCC
T ss_conf 11887997899980589878899998556758