HHsearch alignment for GI: 254780640 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=97.70 E-value=0.00011 Score=43.11 Aligned_cols=42 Identities=19% Similarity=0.082 Sum_probs=28.4
Q ss_pred EEEECEECCCCCEEEECCC-CEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9995401368317998689-869999079865789999999985
Q gi|254780640|r 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 (110)
Q Consensus 32 i~i~nFr~f~~~~~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l 74 (110)
T Consensus 8 ~~y~~~~vl-~~is~~i~~ge~~~l~G~NGsGKTTl~~~l~G~~ 50 (144)
T cd03221 8 KTYGGKLLL-KDISLTINPGDRIGLVGRNGAGKSTLLKLIAGEL 50 (144)
T ss_pred EEECCEEEE-EEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 999999999-6348998799999999899984999999984898