HHsearch alignment for GI: 254780640 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.26 E-value=0.00069 Score=39.22 Aligned_cols=31 Identities=16% Similarity=0.331 Sum_probs=24.8
Q ss_pred EEECCC-CEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 998689-8699990798657899999999857
Q gi|254780640|r 45 KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 (110)
Q Consensus 45 ~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l~ 75 (110)
T Consensus 23 nl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 54 (229)
T cd03254 23 NFSIKPGETVAIVGPTGAGKTTLINLLMRFYD 54 (229)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 99987999999999999809999999966866