HHsearch alignment for GI: 254780640 and conserved domain: cd03295
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.21 E-value=0.00068 Score=39.24 Aligned_cols=31 Identities=26% Similarity=0.458 Sum_probs=25.1
Q ss_pred EEECCC-CEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 998689-8699990798657899999999857
Q gi|254780640|r 45 KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 (110)
Q Consensus 45 ~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l~ 75 (110)
T Consensus 21 sl~i~~Ge~~~ilGpSG~GKSTllr~i~gl~~ 52 (242)
T cd03295 21 NLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE 52 (242)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 76886998999999999569999999975999