>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.87  E-value=1.7e-05  Score=47.31  Aligned_cols=30  Identities=33%  Similarity=0.420  Sum_probs=24.0

Q ss_pred             ECCC-CEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             8689-86999907986578999999998579
Q gi|254780640|r   47 EFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG   76 (110)
Q Consensus        47 ~f~~-~~~~i~G~Ng~GKStil~ai~~~l~g   76 (110)
T Consensus        20 ~i~~Ge~~~ilGpSGsGKSTLl~li~Gl~~p   50 (211)
T cd03298          20 TFAQGEITAIVGPSGSGKSTLLNLIAGFETP   50 (211)
T ss_pred             EECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf             9889989999999995599999999769998