BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780640|ref|YP_003065053.1| hypothetical protein CLIBASIA_02635 [Candidatus Liberibacter asiaticus str. psy62] (110 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780640|ref|YP_003065053.1| hypothetical protein CLIBASIA_02635 [Candidatus Liberibacter asiaticus str. psy62] gi|254040317|gb|ACT57113.1| hypothetical protein CLIBASIA_02635 [Candidatus Liberibacter asiaticus str. psy62] Length = 110 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG Sbjct: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK Sbjct: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 >gi|255595159|ref|XP_002536238.1| conserved hypothetical protein [Ricinus communis] gi|223520335|gb|EEF26146.1| conserved hypothetical protein [Ricinus communis] Length = 344 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 24/47 (51%), Positives = 31/47 (65%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I +L +E+ HFRGF+E EF + T V G NG GKSSL EA+E+ Sbjct: 80 IVRLTKLEVEHFRGFSEKHTFEFKNPYTFVYGPNGTGKSSLCEALEY 126 >gi|330970648|gb|EGH70714.1| SMC-like protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 882 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/47 (48%), Positives = 31/47 (65%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I +L +E+ HFRGF++ EF + T V G NG GKSSL EA+E+ Sbjct: 80 IVRLTKVEVEHFRGFSDKHTFEFKNPYTFVYGPNGTGKSSLCEALEY 126 >gi|257793002|ref|YP_003186401.1| SMC domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479694|gb|ACV60012.1| SMC domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 514 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+L I++ +FR FTE +F D +T+++G NG GKS+L+EA+ W +G Sbjct: 2 KILSIQLENFRSFTE-ASFQFHD-ITVISGHNGAGKSTLAEAVVWCLFG 48 >gi|116492610|ref|YP_804345.1| condensin subunit Smc [Pediococcus pentosaceus ATCC 25745] gi|116102760|gb|ABJ67903.1| condensin subunit Smc [Pediococcus pentosaceus ATCC 25745] Length = 1176 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/46 (52%), Positives = 31/46 (67%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL IEIS F+ F + KIEF D +T + G NG GKS++ EAI W+ Sbjct: 2 KLRTIEISGFKSFADNTKIEFKDGITGIVGPNGSGKSNIIEAIRWV 47 >gi|218289469|ref|ZP_03493697.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240337|gb|EED07519.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 514 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+L I++ +FR FTE +F D +T+++G NG GKS+L+EA+ W +G Sbjct: 2 KILSIQLENFRSFTE-ASFQFHD-ITVISGHNGAGKSTLAEAVVWCLFG 48 >gi|167647762|ref|YP_001685425.1| SMC domain-containing protein [Caulobacter sp. K31] gi|167350192|gb|ABZ72927.1| SMC domain protein [Caulobacter sp. K31] Length = 682 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 30/45 (66%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 IEI FRGF ++ +I F T++ G+NG GKS+L +A+E+ G Sbjct: 6 IEICGFRGFRDLVRINFGRGFTVITGRNGVGKSTLCDAVEFAIIG 50 >gi|226226181|ref|YP_002760287.1| exonuclease [Gemmatimonas aurantiaca T-27] gi|226089372|dbj|BAH37817.1| exonuclease [Gemmatimonas aurantiaca T-27] Length = 800 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + + +FR + +I+FA LT + G NG GKS++ EAI W YG + R + DSI Sbjct: 2 RLHSLHLVNFRQHAD-TRIDFALGLTGIIGPNGSGKSTILEAIAWSLYGNSAARGNKDSI 60 Query: 88 KKRSIK 93 ++ S++ Sbjct: 61 RRLSVE 66 >gi|329575675|gb|EGG57202.1| RecF/RecN/SMC protein [Enterococcus faecalis TX1467] Length = 287 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|323479028|gb|ADX78467.1| chromosome partition protein SMC [Enterococcus faecalis 62] Length = 308 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|332638234|ref|ZP_08417097.1| Barmotin [Weissella cibaria KACC 11862] Length = 1185 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EIS F+ F + KIEF +T V G NG GKS++ EAI W+ + + GD + Sbjct: 2 KLKTLEISGFKSFADRTKIEFMPGITGVVGPNGSGKSNIIEAIRWVMGEQSAKGLRGDKM 61 >gi|237725014|ref|ZP_04555495.1| predicted protein [Bacteroides sp. D4] gi|229436752|gb|EEO46829.1| predicted protein [Bacteroides dorei 5_1_36/D4] Length = 722 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Query: 32 IEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I+I +FR + E EF+D LT++ G NG GK++ EA+EWLF ++R Sbjct: 6 IDIKNFRSYYGENNHFEFSDGLTLILGDNGDGKTTFFEALEWLFDTTSER 55 >gi|315925614|ref|ZP_07921824.1| recombination protein F [Pseudoramibacter alactolyticus ATCC 23263] gi|315621155|gb|EFV01126.1| recombination protein F [Pseudoramibacter alactolyticus ATCC 23263] Length = 372 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + D+++ HFR + ++ +F+DH+ ++ G N GK++L EA+ +L GY+ R Sbjct: 3 ITDLQLKHFRNYAS-EQFDFSDHINVITGANAQGKTNLLEALFFLARGYSHR 53 >gi|188581835|ref|YP_001925280.1| SMC domain protein [Methylobacterium populi BJ001] gi|179345333|gb|ACB80745.1| SMC domain protein [Methylobacterium populi BJ001] Length = 687 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 31/45 (68%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +E+ FRGF E Q+++F T++ G+NG GKS+L +A+E+ G Sbjct: 6 LELCGFRGFRERQRVDFGPGFTVICGRNGVGKSTLCDAVEFAVTG 50 >gi|256851299|ref|ZP_05556688.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN] gi|260660723|ref|ZP_05861638.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN] gi|282933256|ref|ZP_06338643.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] gi|256616361|gb|EEU21549.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN] gi|260548445|gb|EEX24420.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN] gi|281302760|gb|EFA94975.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] Length = 1189 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSNMK 62 Query: 89 K-----RSIKTPM 96 +TPM Sbjct: 63 DVIFAGSQYRTPM 75 >gi|238854773|ref|ZP_04645103.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3] gi|260664005|ref|ZP_05864858.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US] gi|282933851|ref|ZP_06339199.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] gi|238832563|gb|EEQ24870.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3] gi|260561891|gb|EEX27860.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US] gi|281301940|gb|EFA94194.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] Length = 1189 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSNMK 62 Query: 89 K-----RSIKTPM 96 +TPM Sbjct: 63 DVIFAGSQYRTPM 75 >gi|297206168|ref|ZP_06923563.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16] gi|297149294|gb|EFH29592.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16] Length = 1189 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSNMK 62 Query: 89 K-----RSIKTPM 96 +TPM Sbjct: 63 DVIFAGSQYRTPM 75 >gi|304384764|ref|ZP_07367110.1| cell division protein Smc [Pediococcus acidilactici DSM 20284] gi|304328958|gb|EFL96178.1| cell division protein Smc [Pediococcus acidilactici DSM 20284] Length = 1184 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 31/46 (67%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL IEIS F+ F + KI+F D +T + G NG GKS++ EAI W+ Sbjct: 2 KLRTIEISGFKSFADHTKIDFKDGITGIVGPNGSGKSNIIEAIRWV 47 >gi|270290358|ref|ZP_06196583.1| chromosome segregation protein SMC [Pediococcus acidilactici 7_4] gi|270281139|gb|EFA26972.1| chromosome segregation protein SMC [Pediococcus acidilactici 7_4] Length = 1184 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 31/46 (67%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL IEIS F+ F + KI+F D +T + G NG GKS++ EAI W+ Sbjct: 2 KLRTIEISGFKSFADHTKIDFKDGITGIVGPNGSGKSNIIEAIRWV 47 >gi|258645804|ref|ZP_05733273.1| putative cell division protein Smc [Dialister invisus DSM 15470] gi|260403174|gb|EEW96721.1| putative cell division protein Smc [Dialister invisus DSM 15470] Length = 1185 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KLL + + F+ F + IEFAD +T++ G NG GKS++S+A+ W+ Sbjct: 2 KLLRLILQGFKSFADKTTIEFADGMTVIVGPNGCGKSNISDAVRWVL 48 >gi|241895654|ref|ZP_04782950.1| SMC structural maintenance of chromosomes partitioning protein [Weissella paramesenteroides ATCC 33313] gi|241871021|gb|EER74772.1| SMC structural maintenance of chromosomes partitioning protein [Weissella paramesenteroides ATCC 33313] Length = 1184 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EI+ F+ F E KIEF +T V G NG GKS++ EAI W+ + + GD + Sbjct: 2 KLKTLEITGFKSFAERTKIEFMPGITGVVGPNGSGKSNIIEAIRWVMGEQSAKGLRGDKM 61 >gi|239834808|ref|ZP_04683136.1| SMC domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822871|gb|EEQ94440.1| SMC domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 685 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 32/49 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E+ FRGF + +I+F T++ G+NG GKS+L +A+E+ G ++ Sbjct: 6 VEVCGFRGFRDKVRIDFGRGFTVITGRNGVGKSTLCDAVEFAITGLIEK 54 >gi|212695674|ref|ZP_03303802.1| hypothetical protein ANHYDRO_00191 [Anaerococcus hydrogenalis DSM 7454] gi|212677347|gb|EEB36954.1| hypothetical protein ANHYDRO_00191 [Anaerococcus hydrogenalis DSM 7454] Length = 246 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E+ F+ F E KI+F + +T V G NG GKS++++AI+W+ + + G Sbjct: 4 IRLESVELKGFKSFAERTKIKFNNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRGKK 63 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + + PM MA Sbjct: 64 MDDVIFQGSDQKKPMNMA 81 >gi|88861392|ref|ZP_01136022.1| putative SMC family protein [Pseudoalteromonas tunicata D2] gi|88816658|gb|EAR26483.1| putative SMC family protein [Pseudoalteromonas tunicata D2] Length = 1141 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|313891627|ref|ZP_07825234.1| chromosome segregation protein SMC [Dialister microaerophilus UPII 345-E] gi|313119905|gb|EFR43090.1| chromosome segregation protein SMC [Dialister microaerophilus UPII 345-E] Length = 1185 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 32/48 (66%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KLL + + F+ F + IEF+D +T++ G NG GKS++S+A+ W+ Sbjct: 1 MKLLRLTMQGFKSFADKTTIEFSDGMTVIVGPNGCGKSNISDAVRWVL 48 >gi|148642753|ref|YP_001273266.1| DNA repair ATPase SbcC [Methanobrevibacter smithii ATCC 35061] gi|148551770|gb|ABQ86898.1| ATPase involved in DNA repair, SbcC [Methanobrevibacter smithii ATCC 35061] Length = 658 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 32 IEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 IEI++FR F QKI+F ++LTI+ NG GK+SL A+ W YG Sbjct: 6 IEITNFRPFYGTQKIDFGFNDLENLTIILADNGSGKTSLVNALTWCLYG 54 >gi|325849116|ref|ZP_08170608.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480361|gb|EGC83424.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 463 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E+ F+ F E KI+F + +T V G NG GKS++++AI+W+ + + G Sbjct: 4 IRLESVELKGFKSFAERTKIKFNNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRGKK 63 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + + PM MA Sbjct: 64 MDDVIFQGSDQKKPMNMA 81 >gi|315127019|ref|YP_004069022.1| SMC protein [Pseudoalteromonas sp. SM9913] gi|315015533|gb|ADT68871.1| SMC protein [Pseudoalteromonas sp. SM9913] Length = 1133 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|259046635|ref|ZP_05737036.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259036800|gb|EEW38055.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 1189 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/47 (48%), Positives = 31/47 (65%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IE+S F+ F + IEF +T V G NG GKS+LSEAI+W+ Sbjct: 2 QLEKIEMSGFKSFADKTTIEFDKGVTAVVGPNGSGKSNLSEAIKWVL 48 >gi|153931580|ref|YP_001385102.1| RecF/RecN/SMC domain-containing protein [Clostridium botulinum A str. ATCC 19397] gi|153937474|ref|YP_001388571.1| RecF/RecN/SMC domain-containing protein [Clostridium botulinum A str. Hall] gi|152927624|gb|ABS33124.1| RecF/RecN/SMC domain protein [Clostridium botulinum A str. ATCC 19397] gi|152933388|gb|ABS38887.1| RecF/RecN/SMC domain protein [Clostridium botulinum A str. Hall] Length = 837 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 7/78 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F + ++ I++FRG+ +K F D ++ +++G NGYGK++L ++IEW G T + Sbjct: 4 FYIKNVLINNFRGYNAEKKYRFEDDNGNPSNIVLLSGPNGYGKTTLMDSIEWCLTG-TIK 62 Query: 81 RKHGDSIKKRSIKTPMPM 98 R + D +K+ S KT + Sbjct: 63 RVYDDYMKRCSQKTEREL 80 >gi|332532504|ref|ZP_08408382.1| chromosome partition protein Smc [Pseudoalteromonas haloplanktis ANT/505] gi|332038147|gb|EGI74594.1| chromosome partition protein Smc [Pseudoalteromonas haloplanktis ANT/505] Length = 1133 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|119472553|ref|ZP_01614601.1| putative SMC family protein [Alteromonadales bacterium TW-7] gi|119444877|gb|EAW26177.1| putative SMC family protein [Alteromonadales bacterium TW-7] Length = 1134 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|77360024|ref|YP_339599.1| SMC protein [Pseudoalteromonas haloplanktis TAC125] gi|76874935|emb|CAI86156.1| putative SMC family protein [Pseudoalteromonas haloplanktis TAC125] Length = 1137 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|262282929|ref|ZP_06060696.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] gi|262261181|gb|EEY79880.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] Length = 879 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +L + I +FR F + +F+ +TI G NG GKSS+ +AI+W G R K+ Sbjct: 1 MMIRLKQVIIKNFRNFQGTHQFDFSKDVTIFLGDNGNGKSSVFDAIQWCLTGNVDRFKNI 60 Query: 85 DSIK 88 S++ Sbjct: 61 GSVE 64 >gi|127513307|ref|YP_001094504.1| chromosome segregation protein SMC [Shewanella loihica PV-4] gi|126638602|gb|ABO24245.1| chromosome segregation protein SMC [Shewanella loihica PV-4] Length = 1141 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F ++ KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLTQIKLAGFKSFVDVTKIPFNQPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|257083237|ref|ZP_05577598.1| chromosome partition protein SMC [Enterococcus faecalis Fly1] gi|256991267|gb|EEU78569.1| chromosome partition protein SMC [Enterococcus faecalis Fly1] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|256962934|ref|ZP_05567105.1| chromosome partition protein SMC [Enterococcus faecalis HIP11704] gi|307273592|ref|ZP_07554820.1| segregation protein SMC [Enterococcus faecalis TX0855] gi|256953430|gb|EEU70062.1| chromosome partition protein SMC [Enterococcus faecalis HIP11704] gi|306509605|gb|EFM78647.1| segregation protein SMC [Enterococcus faecalis TX0855] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|256958377|ref|ZP_05562548.1| chromosome partition protein SMC [Enterococcus faecalis DS5] gi|257078312|ref|ZP_05572673.1| chromosome partition protein SMC [Enterococcus faecalis JH1] gi|257080501|ref|ZP_05574862.1| chromosome partition protein SMC [Enterococcus faecalis E1Sol] gi|294780224|ref|ZP_06745596.1| chromosome segregation protein SMC [Enterococcus faecalis PC1.1] gi|307270585|ref|ZP_07551883.1| segregation protein SMC [Enterococcus faecalis TX4248] gi|256948873|gb|EEU65505.1| chromosome partition protein SMC [Enterococcus faecalis DS5] gi|256986342|gb|EEU73644.1| chromosome partition protein SMC [Enterococcus faecalis JH1] gi|256988531|gb|EEU75833.1| chromosome partition protein SMC [Enterococcus faecalis E1Sol] gi|294452767|gb|EFG21197.1| chromosome segregation protein SMC [Enterococcus faecalis PC1.1] gi|306513166|gb|EFM81800.1| segregation protein SMC [Enterococcus faecalis TX4248] gi|315034801|gb|EFT46733.1| segregation protein SMC [Enterococcus faecalis TX0027] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|256618146|ref|ZP_05474992.1| chromosome partition protein SMC [Enterococcus faecalis ATCC 4200] gi|256597673|gb|EEU16849.1| chromosome partition protein SMC [Enterococcus faecalis ATCC 4200] gi|315031784|gb|EFT43716.1| segregation protein SMC [Enterococcus faecalis TX0017] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|229547476|ref|ZP_04436201.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX1322] gi|256854771|ref|ZP_05560135.1| chromosome partition protein SMC [Enterococcus faecalis T8] gi|229307400|gb|EEN73387.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX1322] gi|256710331|gb|EEU25375.1| chromosome partition protein SMC [Enterococcus faecalis T8] gi|315028378|gb|EFT40310.1| segregation protein SMC [Enterococcus faecalis TX4000] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|307276680|ref|ZP_07557798.1| segregation protein SMC [Enterococcus faecalis TX2134] gi|306506790|gb|EFM75942.1| segregation protein SMC [Enterococcus faecalis TX2134] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|256960444|ref|ZP_05564615.1| chromosome partition protein SMC [Enterococcus faecalis Merz96] gi|293385102|ref|ZP_06630928.1| cell division protein Smc [Enterococcus faecalis R712] gi|293389075|ref|ZP_06633547.1| cell division protein Smc [Enterococcus faecalis S613] gi|312906715|ref|ZP_07765715.1| segregation protein SMC [Enterococcus faecalis DAPTO 512] gi|312910824|ref|ZP_07769660.1| chromosome segregation protein SMC [Enterococcus faecalis DAPTO 516] gi|256950940|gb|EEU67572.1| chromosome partition protein SMC [Enterococcus faecalis Merz96] gi|291077579|gb|EFE14943.1| cell division protein Smc [Enterococcus faecalis R712] gi|291081543|gb|EFE18506.1| cell division protein Smc [Enterococcus faecalis S613] gi|310627363|gb|EFQ10646.1| segregation protein SMC [Enterococcus faecalis DAPTO 512] gi|311288847|gb|EFQ67403.1| chromosome segregation protein SMC [Enterococcus faecalis DAPTO 516] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|255974284|ref|ZP_05424870.1| chromosome partition protein SMC [Enterococcus faecalis T2] gi|307284871|ref|ZP_07565027.1| segregation protein SMC [Enterococcus faecalis TX0860] gi|255967156|gb|EET97778.1| chromosome partition protein SMC [Enterococcus faecalis T2] gi|306503130|gb|EFM72387.1| segregation protein SMC [Enterococcus faecalis TX0860] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|255970708|ref|ZP_05421294.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|312953195|ref|ZP_07772041.1| segregation protein SMC [Enterococcus faecalis TX0102] gi|255961726|gb|EET94202.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|310628812|gb|EFQ12095.1| segregation protein SMC [Enterococcus faecalis TX0102] gi|315152763|gb|EFT96779.1| segregation protein SMC [Enterococcus faecalis TX0031] gi|315159401|gb|EFU03418.1| segregation protein SMC [Enterococcus faecalis TX0312] gi|327536217|gb|AEA95051.1| cell division protein Smc [Enterococcus faecalis OG1RF] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|163790809|ref|ZP_02185234.1| chromosome partition protein SMC [Carnobacterium sp. AT7] gi|159873877|gb|EDP67956.1| chromosome partition protein SMC [Carnobacterium sp. AT7] Length = 1190 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 34/57 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L I+I+ F+ F + IEF D +T V G NG GKS+++EAI W+ + R G Sbjct: 2 QLKRIDIAGFKSFADKTTIEFHDGVTAVVGPNGSGKSNITEAIRWVLGEQSARNLRG 58 >gi|29377553|ref|NP_816707.1| chromosome partition protein SMC [Enterococcus faecalis V583] gi|229548051|ref|ZP_04436776.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis ATCC 29200] gi|256761075|ref|ZP_05501655.1| chromosome partition protein SMC [Enterococcus faecalis T3] gi|257091336|ref|ZP_05585697.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257417942|ref|ZP_05594936.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420450|ref|ZP_05597440.1| chromosome partition protein SMC [Enterococcus faecalis X98] gi|307292115|ref|ZP_07571981.1| segregation protein SMC [Enterococcus faecalis TX0411] gi|312902146|ref|ZP_07761406.1| segregation protein SMC [Enterococcus faecalis TX0470] gi|312905398|ref|ZP_07764512.1| segregation protein SMC [Enterococcus faecalis TX0635] gi|28375547|emb|CAD66597.1| SMC protein [Enterococcus faecalis] gi|29345020|gb|AAO82777.1| chromosome partition protein SMC [Enterococcus faecalis V583] gi|229306840|gb|EEN72836.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis ATCC 29200] gi|256682326|gb|EEU22021.1| chromosome partition protein SMC [Enterococcus faecalis T3] gi|257000148|gb|EEU86668.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257159770|gb|EEU89730.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162274|gb|EEU92234.1| chromosome partition protein SMC [Enterococcus faecalis X98] gi|306496768|gb|EFM66319.1| segregation protein SMC [Enterococcus faecalis TX0411] gi|310631127|gb|EFQ14410.1| segregation protein SMC [Enterococcus faecalis TX0635] gi|311290810|gb|EFQ69366.1| segregation protein SMC [Enterococcus faecalis TX0470] gi|315154689|gb|EFT98705.1| segregation protein SMC [Enterococcus faecalis TX0043] gi|315161160|gb|EFU05177.1| segregation protein SMC [Enterococcus faecalis TX0645] gi|315167204|gb|EFU11221.1| segregation protein SMC [Enterococcus faecalis TX1341] gi|315573245|gb|EFU85436.1| segregation protein SMC [Enterococcus faecalis TX0309B] gi|315577148|gb|EFU89339.1| segregation protein SMC [Enterococcus faecalis TX0630] gi|315581181|gb|EFU93372.1| segregation protein SMC [Enterococcus faecalis TX0309A] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|257088211|ref|ZP_05582572.1| chromosome partition protein SMC [Enterococcus faecalis D6] gi|256996241|gb|EEU83543.1| chromosome partition protein SMC [Enterococcus faecalis D6] gi|315026455|gb|EFT38387.1| segregation protein SMC [Enterococcus faecalis TX2137] gi|315171218|gb|EFU15235.1| segregation protein SMC [Enterococcus faecalis TX1342] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|227517299|ref|ZP_03947348.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX0104] gi|227075306|gb|EEI13269.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX0104] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|315172943|gb|EFU16960.1| segregation protein SMC [Enterococcus faecalis TX1346] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|315164396|gb|EFU08413.1| segregation protein SMC [Enterococcus faecalis TX1302] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|315151033|gb|EFT95049.1| segregation protein SMC [Enterococcus faecalis TX0012] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|307288869|ref|ZP_07568842.1| segregation protein SMC [Enterococcus faecalis TX0109] gi|306500141|gb|EFM69485.1| segregation protein SMC [Enterococcus faecalis TX0109] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|257417225|ref|ZP_05594219.1| chromosome partition protein SMC [Enterococcus faecalis AR01/DG] gi|257159053|gb|EEU89013.1| chromosome partition protein SMC [Enterococcus faecalis ARO1/DG] gi|315146606|gb|EFT90622.1| segregation protein SMC [Enterococcus faecalis TX4244] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|300861663|ref|ZP_07107747.1| chromosome segregation protein SMC [Enterococcus faecalis TUSoD Ef11] gi|300849124|gb|EFK76877.1| chromosome segregation protein SMC [Enterococcus faecalis TUSoD Ef11] gi|315145469|gb|EFT89485.1| segregation protein SMC [Enterococcus faecalis TX2141] Length = 1192 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|332664151|ref|YP_004446939.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332965|gb|AEE50066.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 420 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ ++ IS+FRGF E K F++H T++ G NG GK+++ + + LF Sbjct: 2 RIRELTISNFRGFGETVKFPFSEHFTVIAGVNGRGKTAILDGLVLLF 48 >gi|91793868|ref|YP_563519.1| chromosome segregation protein SMC [Shewanella denitrificans OS217] gi|91715870|gb|ABE55796.1| Chromosome segregation protein SMC [Shewanella denitrificans OS217] Length = 1138 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F ++ KI F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDVTKIPFEQQLSAIIGPNGCGKSNIIDAVRWVLGESSAKNLRGDSM 61 >gi|329122026|ref|ZP_08250635.1| hypothetical protein HMPREF9083_1097 [Dialister micraerophilus DSM 19965] gi|327467078|gb|EGF12590.1| hypothetical protein HMPREF9083_1097 [Dialister micraerophilus DSM 19965] Length = 424 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KLL + + F+ F + IEF+D +T++ G NG GKS++S+A+ W+ Sbjct: 2 KLLRLTMQGFKSFADKTTIEFSDGMTVIVGPNGCGKSNISDAVRWVL 48 >gi|257066165|ref|YP_003152421.1| SMC domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798045|gb|ACV28700.1| SMC domain protein [Anaerococcus prevotii DSM 20548] Length = 1172 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L ++E+ F+ F + KIEF + +T V G NG GKS++S+A+ W+ Sbjct: 2 RLENVELKGFKSFADRTKIEFDEKITAVVGPNGSGKSNISDAVRWVL 48 >gi|330998402|ref|ZP_08322226.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] gi|329568508|gb|EGG50313.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] Length = 717 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 29/45 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+I +F+ + EIQ +EF+D L ++ G G GKS L A W+ +G Sbjct: 6 IKIENFQSYYEIQTLEFSDGLNLIIGNGGKGKSKLFNAFYWVLFG 50 >gi|260583708|ref|ZP_05851456.1| cell division protein Smc [Granulicatella elegans ATCC 700633] gi|260158334|gb|EEW93402.1| cell division protein Smc [Granulicatella elegans ATCC 700633] Length = 1186 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/47 (48%), Positives = 31/47 (65%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IE+S F+ F + IEF +T V G NG GKS+LSEAI+W+ Sbjct: 2 QLEKIEMSGFKSFADKTVIEFDKGVTAVVGPNGSGKSNLSEAIKWVL 48 >gi|42527004|ref|NP_972102.1| chromosome partition protein SmC, putative [Treponema denticola ATCC 35405] gi|41817428|gb|AAS12013.1| chromosome partition protein SmC, putative [Treponema denticola ATCC 35405] Length = 980 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 37/60 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++EI F+ F + KIEFAD +T + G NG GKS++ +A++W+ + R D ++ Sbjct: 3 LKNLEIFGFKSFPDRVKIEFADGITALLGPNGCGKSNVVDAVKWVLGEQSSRTLRADKME 62 >gi|295100362|emb|CBK97907.1| condensin subunit Smc [Faecalibacterium prausnitzii L2-6] Length = 1185 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++FK ++EI F+ F + KI F + +T V G NG GKS+LS+A+ W+ G T R+ Sbjct: 1 MVFK--ELEIQGFKSFPDKVKIRFDEGVTGVVGPNGSGKSNLSDAVRWVL-GETSSRQ 55 >gi|328948497|ref|YP_004365834.1| hypothetical protein Tresu_1638 [Treponema succinifaciens DSM 2489] gi|328448821|gb|AEB14537.1| hypothetical protein Tresu_1638 [Treponema succinifaciens DSM 2489] Length = 666 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 I + +FR F +Q +EF++ ++TI+ G+NG GK++ ++A W YG T Sbjct: 6 ITLENFRQFKGLQSVEFSEDNVKNITIILGENGAGKTTFAQAFRWCLYGKT 56 >gi|227554518|ref|ZP_03984565.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis HH22] gi|227176316|gb|EEI57288.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis HH22] Length = 977 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ Sbjct: 6 IEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVL 48 >gi|51892593|ref|YP_075284.1| putative chromosome segregation SMC protein [Symbiobacterium thermophilum IAM 14863] gi|51856282|dbj|BAD40440.1| putative chromosome segregation SMC protein [Symbiobacterium thermophilum IAM 14863] Length = 1193 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 33/56 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +EI F+ F E ++EF +T V G NG GKS++S+AI W+ + R G S+ Sbjct: 6 LEILGFKSFAEKTELEFTPGITAVVGPNGSGKSNVSDAIRWVLGEQSARALRGGSM 61 >gi|308050129|ref|YP_003913695.1| chromosome segregation protein SMC [Ferrimonas balearica DSM 9799] gi|307632319|gb|ADN76621.1| chromosome segregation protein SMC [Ferrimonas balearica DSM 9799] Length = 1152 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + K+ F D +T + G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKQIKLAGFKSFVDPTKVPFPDQMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|325474066|gb|EGC77254.1| chromosome partition protein SmC [Treponema denticola F0402] Length = 980 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + KIEFAD +T + G NG GKS++ +A++W+ + R D ++ Sbjct: 3 LKSLEIFGFKSFPDRVKIEFADGITALLGPNGCGKSNVVDAVKWVLGEQSSRTLRADKME 62 >gi|317052010|ref|YP_004113126.1| chromosome segregation protein SMC [Desulfurispirillum indicum S5] gi|316947094|gb|ADU66570.1| chromosome segregation protein SMC [Desulfurispirillum indicum S5] Length = 1150 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 31/46 (67%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K +EIS F+ F+E ++F D +T + G NG GKS++S+AI W+ Sbjct: 2 KFKRLEISGFKSFSERSVLDFRDGITAIVGPNGCGKSNISDAIRWV 47 >gi|116333589|ref|YP_795116.1| chromosome segregation ATPase [Lactobacillus brevis ATCC 367] gi|116098936|gb|ABJ64085.1| condensin subunit Smc [Lactobacillus brevis ATCC 367] Length = 1183 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 31/47 (65%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EIS F+ F + +I+F +T + G NG GKS++SEA+ W+ Sbjct: 2 RLKTLEISGFKSFADKTRIDFLPGMTGIVGPNGSGKSNISEAVRWVL 48 >gi|328957312|ref|YP_004374698.1| chromosome condensation and segregation SMC ATPase [Carnobacterium sp. 17-4] gi|328673636|gb|AEB29682.1| chromosome condensation and segregation SMC ATPase [Carnobacterium sp. 17-4] Length = 1190 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 31/47 (65%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I+I+ F+ F + IEF D +T V G NG GKS+++EAI W+ Sbjct: 2 QLKRIDIAGFKSFADKTTIEFHDGVTAVVGPNGSGKSNITEAIRWVL 48 >gi|227510451|ref|ZP_03940500.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190103|gb|EEI70170.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 1183 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ Sbjct: 2 QLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVL 48 >gi|85712484|ref|ZP_01043533.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] gi|85693762|gb|EAQ31711.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] Length = 581 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + K+ F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKHIKLAGFKSFVDATKVPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|188533875|ref|YP_001907672.1| hypothetical protein ETA_17370 [Erwinia tasmaniensis Et1/99] gi|188028917|emb|CAO96783.1| Hypothetical protein ETA_17370 [Erwinia tasmaniensis Et1/99] Length = 814 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F++ I +++F+ F+E ++ F DH L I++G NG+GK+++ +AIE G R + D Sbjct: 13 FRIGRIRLTNFKSFSEPLELNFGDHQLIILDGPNGFGKTTIFDAIEISMTGKLLRVRDSD 72 >gi|227513460|ref|ZP_03943509.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus buchneri ATCC 11577] gi|227083333|gb|EEI18645.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus buchneri ATCC 11577] Length = 1183 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ Sbjct: 2 QLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVL 48 >gi|257440563|ref|ZP_05616318.1| putative cell division protein Smc [Faecalibacterium prausnitzii A2-165] gi|257196886|gb|EEU95170.1| putative cell division protein Smc [Faecalibacterium prausnitzii A2-165] Length = 1151 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++FK ++EI F+ F + KI F + +T V G NG GKS+LS+A+ W+ G T R+ Sbjct: 1 MVFK--ELEIQGFKSFPDKVKITFDEGVTGVVGPNGSGKSNLSDAVRWVL-GETSARQ 55 >gi|258647377|ref|ZP_05734846.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260852738|gb|EEX72607.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 717 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +FR + EF+ LT++ G NG GK++ EA+EWLF T+ + + + Sbjct: 3 LKSMNIKNFRSYYGDNTFEFSQGLTLIIGDNGDGKTTFFEALEWLFDTATENKSATNISE 62 Query: 89 KR 90 KR Sbjct: 63 KR 64 >gi|227524603|ref|ZP_03954652.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus hilgardii ATCC 8290] gi|227088278|gb|EEI23590.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus hilgardii ATCC 8290] Length = 1183 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ Sbjct: 2 QLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVL 48 >gi|315640112|ref|ZP_07895234.1| cell division protein Smc [Enterococcus italicus DSM 15952] gi|315484089|gb|EFU74563.1| cell division protein Smc [Enterococcus italicus DSM 15952] Length = 1195 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F I+F D +T + G NG GKS+++EAI W+ Sbjct: 6 IEVAGFKSFANRTTIQFEDQVTAIVGPNGSGKSNITEAIRWVL 48 >gi|22299987|ref|NP_683234.1| recombination protein F [Thermosynechococcus elongatus BP-1] gi|51316460|sp|Q8DG79|RECF_THEEB RecName: Full=DNA replication and repair protein recF gi|22296172|dbj|BAC09996.1| DNA repair and genetic recombination protein [Thermosynechococcus elongatus BP-1] Length = 379 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + HFR ++E Q + FA TI+ G N GKS+L EA+EWL Sbjct: 3 LKSLHLRHFRNYSE-QSVTFAAPKTILVGDNAQGKSNLLEAVEWL 46 >gi|260907422|ref|ZP_05915744.1| hypothetical protein BlinB_18945 [Brevibacterium linens BL2] Length = 882 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K I + ++RG + ++EF D +T+V G N GKSS+ EAI T R+ S Sbjct: 2 KFHSIHLRNYRGIAD-SRVEFGDGVTVVEGPNEVGKSSIHEAI-------THLREDKSSS 53 Query: 88 KKRSIKTPMPM 98 +K S+K P+ Sbjct: 54 RKASVKETQPV 64 >gi|317495798|ref|ZP_07954161.1| chromosome segregation protein SMC [Gemella moribillum M424] gi|316913975|gb|EFV35458.1| chromosome segregation protein SMC [Gemella moribillum M424] Length = 1184 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KLVKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSSM 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|327197619|ref|YP_004301310.1| gp34 [Brochothrix phage NF5] gi|296245442|gb|ADH03056.1| gp34 [Brochothrix phage NF5] Length = 660 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I KL +E+ +F+G E+ I F D+ I+ G NG GK+++ +A WLFYG + Sbjct: 3 IIKLKSLELENFKGVKELL-INFDDNTQIL-GANGSGKTTVVDAFYWLFYGKDSNNRADF 60 Query: 86 SIKKR 90 ++K R Sbjct: 61 ALKPR 65 >gi|157364842|ref|YP_001471609.1| chromosome segregation protein SMC [Thermotoga lettingae TMO] gi|157315446|gb|ABV34545.1| chromosome segregation protein SMC [Thermotoga lettingae TMO] Length = 1175 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 31/47 (65%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL+ + +S F+ F K+ FAD +T + G NG GKS++ +AI W+F Sbjct: 2 KLVSMALSGFKSFARPTKLFFADGITAIIGPNGGGKSNIVDAIRWVF 48 >gi|312887308|ref|ZP_07746910.1| SMC domain protein [Mucilaginibacter paludis DSM 18603] gi|311300204|gb|EFQ77271.1| SMC domain protein [Mucilaginibacter paludis DSM 18603] Length = 622 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 5/77 (6%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EWLFYGYTQR 80 +I KL IEI +FRG E IE D L + G NG GKS++ ++I WL ++ Sbjct: 1 MIMKLERIEIKNFRGI-EDATIELNDQLNLFVGINGSGKSTILDSIVISLSWLVARIQRQ 59 Query: 81 RKHGDSIKKRSIKTPMP 97 G I +SIK P Sbjct: 60 NAPGKPITLQSIKNDTP 76 >gi|259503530|ref|ZP_05746432.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259168608|gb|EEW53103.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 1188 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + I F+ F I+F + +T + G NG GKS++ EAI W+ + R GD + Sbjct: 2 RLLSLTIDGFKSFANKTTIKFEEGMTGIVGPNGSGKSNIIEAIRWVMGEQSARHLRGDKM 61 >gi|170727193|ref|YP_001761219.1| chromosome segregation protein SMC [Shewanella woodyi ATCC 51908] gi|169812540|gb|ACA87124.1| chromosome segregation protein SMC [Shewanella woodyi ATCC 51908] Length = 1133 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F + LT V G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLNPLTAVIGPNGCGKSNIIDAVRWVLGESSAKHLRGDSM 61 >gi|32474054|ref|NP_867048.1| chromosome partition protein Smc [Rhodopirellula baltica SH 1] gi|32444591|emb|CAD74592.1| chromosome partition protein Smc [Rhodopirellula baltica SH 1] Length = 1234 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 36/61 (59%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F L +E++ F+ F + + +F D +T+V G NG GKS++ +A++W+ + + G Sbjct: 42 FMLKALELAGFKSFADRTRFDFPDGITVVVGPNGSGKSNIVDAMKWVLGSQSAKSLRGKD 101 Query: 87 I 87 + Sbjct: 102 M 102 >gi|313885017|ref|ZP_07818769.1| chromosome segregation protein SMC [Eremococcus coleocola ACS-139-V-Col8] gi|312619708|gb|EFR31145.1| chromosome segregation protein SMC [Eremococcus coleocola ACS-139-V-Col8] Length = 1191 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + IEF +T V G NG GKS+LSEAI W+ Sbjct: 6 VEMTGFKSFADKTVIEFDQGMTAVVGPNGSGKSNLSEAIRWVL 48 >gi|145298233|ref|YP_001141074.1| chromosome segregation protein SMC [Aeromonas salmonicida subsp. salmonicida A449] gi|142851005|gb|ABO89326.1| chromosome segregation protein SMC [Aeromonas salmonicida subsp. salmonicida A449] Length = 1124 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 35/56 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F E +IEF+ +T V G NG GKS++ +A+ W+ + R G+++ Sbjct: 6 IKLAGFKSFVEPTRIEFSADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGENM 61 >gi|119719441|ref|YP_919936.1| SMC domain-containing protein [Thermofilum pendens Hrk 5] gi|119524561|gb|ABL77933.1| SMC domain protein [Thermofilum pendens Hrk 5] Length = 784 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQRR 81 +E+ +R F + ++EF D +T++ G G GKSSL A+E+ YG Y +RR Sbjct: 1 MEVEGYRFFKDPFRVEFGDGVTVIAGPVGSGKSSLLSAVEYALYGTDSYIERR 53 >gi|117620939|ref|YP_856566.1| RecF/RecN/SMC family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562346|gb|ABK39294.1| RecF/RecN/SMC family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 556 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EWL 73 T YY + F L +I + +FR F I K+ ++T+ G NG GK+++ +AI W+ Sbjct: 61 TEYYVPENRFVLSEINLVNFRRFDSI-KVRLESNVTVFIGGNGIGKTTIIDAISKVLSWI 119 Query: 74 FYGYTQRRKHGDSIKKRSI 92 G + K+G IK + I Sbjct: 120 VSGIEKEGKNGSPIKYQEI 138 >gi|302392423|ref|YP_003828243.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] gi|302204500|gb|ADL13178.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] Length = 1188 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F E K+EF ++T V G NG GKS++++AI W+ Sbjct: 3 LKKIEMHGFKSFAEEVKVEFEPNITAVLGPNGSGKSNIADAIRWVL 48 >gi|21902529|ref|NP_663774.1| Bartomin [Rattus norvegicus] gi|21717411|dbj|BAC02935.1| barmotin [Rattus norvegicus] Length = 1184 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ Sbjct: 2 KLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWV 47 >gi|295103253|emb|CBL00797.1| condensin subunit Smc [Faecalibacterium prausnitzii SL3/3] Length = 1185 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++FK ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ G T R+ Sbjct: 1 MVFK--ELEIQGFKSFPDKVKISFDTGVTGVVGPNGSGKSNLSDAVRWVL-GETSSRQ 55 >gi|160946002|ref|ZP_02093228.1| hypothetical protein FAEPRAM212_03535 [Faecalibacterium prausnitzii M21/2] gi|158443733|gb|EDP20738.1| hypothetical protein FAEPRAM212_03535 [Faecalibacterium prausnitzii M21/2] Length = 1185 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++FK ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ G T R+ Sbjct: 1 MVFK--ELEIQGFKSFPDKVKISFDTGVTGVVGPNGSGKSNLSDAVRWVL-GETSSRQ 55 >gi|326693699|ref|ZP_08230704.1| chromosome partition protein [Leuconostoc argentinum KCTC 3773] Length = 1184 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ Sbjct: 2 KLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWV 47 >gi|332707257|ref|ZP_08427310.1| RecF/RecN/SMC protein [Lyngbya majuscula 3L] gi|332353991|gb|EGJ33478.1| RecF/RecN/SMC protein [Lyngbya majuscula 3L] Length = 718 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGFTEI---QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++L+ ++I FRGF E ++ F T++ G G GKSS AIEW +G K Sbjct: 4 YRLVSVKIKGFRGFPEQAGEREFRFDQACTLIVGAQGGGKSSTLNAIEWCLFGKDVANKS 63 Query: 84 GDSIKKR 90 I++R Sbjct: 64 ATKIEER 70 >gi|54020293|ref|YP_116186.1| p115 protein [Mycoplasma hyopneumoniae 232] gi|53987466|gb|AAV27667.1| p115 protein [Mycoplasma hyopneumoniae 232] Length = 979 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 2 KLIKIEIEGFKSFAESVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQNM 61 Query: 85 DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 62 DDVIFAGSKTVMPVNKAMVKLTF 84 >gi|302343404|ref|YP_003807933.1| chromosome segregation protein SMC [Desulfarculus baarsii DSM 2075] gi|301640017|gb|ADK85339.1| chromosome segregation protein SMC [Desulfarculus baarsii DSM 2075] Length = 1188 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EIS F+ F + ++F D L V G NG GKS++ +AI W+ + R+ G ++ Sbjct: 2 KVKRLEISGFKSFAQRAVLDFPDGLCAVVGPNGCGKSNVVDAIRWVLGEQSARQLRGQAM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|312869939|ref|ZP_07730078.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] gi|311094524|gb|EFQ52829.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] Length = 1188 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + I F+ F I+F + +T + G NG GKS++ EAI W+ + R GD + Sbjct: 2 QLLSLTIDGFKSFANKTTIKFEEGMTGIVGPNGSGKSNIIEAIRWVMGEQSARHLRGDKM 61 >gi|260663570|ref|ZP_05864460.1| chromosome segregation protein SMC [Lactobacillus fermentum 28-3-CHN] gi|260552111|gb|EEX25164.1| chromosome segregation protein SMC [Lactobacillus fermentum 28-3-CHN] Length = 1187 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD + Sbjct: 2 RLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDKM 61 >gi|329767728|ref|ZP_08259244.1| chromosome segregation protein SMC [Gemella haemolysans M341] gi|328838829|gb|EGF88423.1| chromosome segregation protein SMC [Gemella haemolysans M341] Length = 1184 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KLAKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSSM 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|300726126|ref|ZP_07059583.1| RecF/RecN/SMC N-terminal domain protein [Prevotella bryantii B14] gi|299776596|gb|EFI73149.1| RecF/RecN/SMC N-terminal domain protein [Prevotella bryantii B14] Length = 722 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Query: 34 ISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I +FR + + K EF+D LT++ G NG GK++ EA++WLF Sbjct: 8 IKNFRSYYGDNNKFEFSDGLTLILGDNGDGKTTFFEALQWLF 49 >gi|304312654|ref|YP_003812252.1| Chromosome segregation ATPase [gamma proteobacterium HdN1] gi|301798387|emb|CBL46611.1| Chromosome segregation ATPase [gamma proteobacterium HdN1] Length = 1166 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+I+ F+ F + I F D+LT V G NG GKS+ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKIAGFKSFVDPTHITFPDNLTAVVGPNGCGKSNTIDAVRWVMGESSAKNLRGESM 61 >gi|296166197|ref|ZP_06848638.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898445|gb|EFG78010.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 688 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I + +FR F I +IEFA ++T++ G NG GK++L A W+ YG Sbjct: 2 KLHRIRLENFRQFQGISEIEFAQDKQQNVTLIWGANGAGKTTLLNAFTWVLYG 54 >gi|227515695|ref|ZP_03945744.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus fermentum ATCC 14931] gi|227085943|gb|EEI21255.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus fermentum ATCC 14931] Length = 1187 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD + Sbjct: 2 RLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDKM 61 >gi|184155713|ref|YP_001844053.1| chromosome segregation protein [Lactobacillus fermentum IFO 3956] gi|183227057|dbj|BAG27573.1| chromosome segregation protein [Lactobacillus fermentum IFO 3956] Length = 1187 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD + Sbjct: 2 RLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDKM 61 >gi|72080984|ref|YP_288042.1| ABC transporter ATP-binding protein P115-like [Mycoplasma hyopneumoniae 7448] gi|71914108|gb|AAZ54019.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma hyopneumoniae 7448] Length = 979 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 2 KLIKIEIEGFKSFAEPVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQNM 61 Query: 85 DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 62 DDVIFAGSKTVMPVNKAMVKLTF 84 >gi|71894005|ref|YP_279451.1| putative ABC transporter ATP-binding protein P115-like [Mycoplasma hyopneumoniae J] gi|71852132|gb|AAZ44740.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma hyopneumoniae J] Length = 979 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 2 KLIKIEIEGFKSFAEPVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQNM 61 Query: 85 DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 62 DDVIFAGSKTVMPVNKAMVKLTF 84 >gi|241888878|ref|ZP_04776184.1| chromosome segregation protein SMC [Gemella haemolysans ATCC 10379] gi|241864554|gb|EER68930.1| chromosome segregation protein SMC [Gemella haemolysans ATCC 10379] Length = 1184 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KLAKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSSM 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|329770216|ref|ZP_08261606.1| chromosome segregation protein SMC [Gemella sanguinis M325] gi|328837022|gb|EGF86666.1| chromosome segregation protein SMC [Gemella sanguinis M325] Length = 1184 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EI+ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KLSKVEITGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSSM 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|313114997|ref|ZP_07800490.1| segregation protein SMC [Faecalibacterium cf. prausnitzii KLE1255] gi|310622688|gb|EFQ06150.1| segregation protein SMC [Faecalibacterium cf. prausnitzii KLE1255] Length = 1185 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++FK ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ G T R+ Sbjct: 1 MVFK--ELEIQGFKSFPDKVKIRFDAGVTGVVGPNGSGKSNLSDAVRWVL-GETSSRQ 55 >gi|300781881|ref|YP_003739116.1| hypothetical protein EbC_pEb10200590 [Erwinia billingiae Eb661] gi|299060147|emb|CAX53337.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 875 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 30/51 (58%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I +LL +E+ FRGF + + + +T++ G NG GKSS EA+E G Sbjct: 80 IGRLLQLEVGPFRGFMRQETFDLSYDITLIYGANGTGKSSFFEALELAMLG 130 >gi|255994064|ref|ZP_05427199.1| putative RecF/RecN/SMC N domain protein [Eubacterium saphenum ATCC 49989] gi|255993732|gb|EEU03821.1| putative RecF/RecN/SMC N domain protein [Eubacterium saphenum ATCC 49989] Length = 1187 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L + I F+ F + KI+F + +T + G NG GKS++S+A+ W+F + R G Sbjct: 2 RLKSLSIKGFKSFADPVKIDFDEGITCIVGPNGSGKSNVSDALRWVFGEQSARTLRG 58 >gi|120598460|ref|YP_963034.1| chromosome segregation protein SMC [Shewanella sp. W3-18-1] gi|146293462|ref|YP_001183886.1| chromosome segregation protein SMC [Shewanella putrefaciens CN-32] gi|120558553|gb|ABM24480.1| chromosome segregation protein SMC [Shewanella sp. W3-18-1] gi|145565152|gb|ABP76087.1| chromosome segregation protein SMC [Shewanella putrefaciens CN-32] Length = 1145 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDSTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|56460803|ref|YP_156084.1| chromosome segregation ATPase, sms [Idiomarina loihiensis L2TR] gi|56179813|gb|AAV82535.1| Chromosome segregation ATPase, sms [Idiomarina loihiensis L2TR] Length = 1152 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++ F+ F + K+ F D +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKHIKLVGFKSFVDPTKVPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|28378330|ref|NP_785222.1| cell division protein Smc [Lactobacillus plantarum WCFS1] gi|28271165|emb|CAD64070.1| cell division protein Smc [Lactobacillus plantarum WCFS1] Length = 1185 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EIS F+ F + KI+F +T + G NG GKS++ EAI W+ Sbjct: 2 QLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVL 48 >gi|254556538|ref|YP_003062955.1| cell division protein Smc [Lactobacillus plantarum JDM1] gi|300767267|ref|ZP_07077179.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180481|ref|YP_003924609.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045465|gb|ACT62258.1| cell division protein Smc [Lactobacillus plantarum JDM1] gi|300495086|gb|EFK30242.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045972|gb|ADN98515.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ST-III] Length = 1185 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EIS F+ F + KI+F +T + G NG GKS++ EAI W+ Sbjct: 2 QLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVL 48 >gi|257870562|ref|ZP_05650215.1| chromosome partition protein SMC [Enterococcus gallinarum EG2] gi|257804726|gb|EEV33548.1| chromosome partition protein SMC [Enterococcus gallinarum EG2] Length = 1196 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADRTIIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|160875871|ref|YP_001555187.1| chromosome segregation protein SMC [Shewanella baltica OS195] gi|160861393|gb|ABX49927.1| chromosome segregation protein SMC [Shewanella baltica OS195] Length = 1138 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|153001198|ref|YP_001366879.1| chromosome segregation protein SMC [Shewanella baltica OS185] gi|151365816|gb|ABS08816.1| chromosome segregation protein SMC [Shewanella baltica OS185] Length = 1138 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|315268062|gb|ADT94915.1| chromosome segregation protein SMC [Shewanella baltica OS678] Length = 1169 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 33 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 92 >gi|149911744|ref|ZP_01900350.1| Chromosome segregation ATPase, sms [Moritella sp. PE36] gi|149805169|gb|EDM65189.1| Chromosome segregation ATPase, sms [Moritella sp. PE36] Length = 1160 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 34/59 (57%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I+IS F+ F + ++ F +T V G NG GKS++ +A+ W+ + + GDS+ Sbjct: 3 LKKIKISGFKSFVDTTELHFPHDMTAVVGPNGCGKSNIIDAVRWVLGESSAKHLRGDSM 61 >gi|332306123|ref|YP_004433974.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173452|gb|AEE22706.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1164 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I F D +T + G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKKIKLAGFKSFVDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 Query: 88 -----KKRSIKTPMPMC 99 S + P+ C Sbjct: 62 IDVIFNGSSARKPVSQC 78 >gi|319426764|gb|ADV54838.1| chromosome segregation protein SMC [Shewanella putrefaciens 200] Length = 1145 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|304411947|ref|ZP_07393558.1| chromosome segregation protein SMC [Shewanella baltica OS183] gi|307303285|ref|ZP_07583040.1| chromosome segregation protein SMC [Shewanella baltica BA175] gi|304349807|gb|EFM14214.1| chromosome segregation protein SMC [Shewanella baltica OS183] gi|306913645|gb|EFN44067.1| chromosome segregation protein SMC [Shewanella baltica BA175] Length = 1169 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 33 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 92 >gi|119774651|ref|YP_927391.1| SMC family protein [Shewanella amazonensis SB2B] gi|119767151|gb|ABL99721.1| SMC family protein [Shewanella amazonensis SB2B] Length = 1139 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + +I F + LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTRIPFPNPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|126174868|ref|YP_001051017.1| chromosome segregation protein SMC [Shewanella baltica OS155] gi|125998073|gb|ABN62148.1| chromosome segregation protein SMC [Shewanella baltica OS155] Length = 1138 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|15639358|ref|NP_218807.1| chromosome segregation protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189025600|ref|YP_001933372.1| chromosome segregation protein [Treponema pallidum subsp. pallidum SS14] gi|3322648|gb|AAC65355.1| chromosome segregation protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189018175|gb|ACD70793.1| possible chromosome segregation protein [Treponema pallidum subsp. pallidum SS14] gi|291059759|gb|ADD72494.1| chromosome segregation protein SMC [Treponema pallidum subsp. pallidum str. Chicago] Length = 941 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 36/60 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + ++EFAD +T + G NG GKS++ +AI+W+ + R D ++ Sbjct: 4 LKTLEVFGFKSFADRVRVEFADGVTALLGPNGCGKSNVVDAIKWVLGEQSSRALRADRME 63 >gi|296111746|ref|YP_003622128.1| cell division protein Smc [Leuconostoc kimchii IMSNU 11154] gi|295833278|gb|ADG41159.1| cell division protein Smc [Leuconostoc kimchii IMSNU 11154] Length = 1184 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ Sbjct: 2 KLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWV 47 >gi|217972880|ref|YP_002357631.1| chromosome segregation protein SMC [Shewanella baltica OS223] gi|217498015|gb|ACK46208.1| chromosome segregation protein SMC [Shewanella baltica OS223] Length = 1138 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|291279725|ref|YP_003496560.1| chromosome segregation protein SMC [Deferribacter desulfuricans SSM1] gi|290754427|dbj|BAI80804.1| chromosome segregation protein SMC [Deferribacter desulfuricans SSM1] Length = 1122 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 RKLI + F+ F + IEF D +T + G NG GKS++ +AI W+F + + Sbjct: 4 RKLILQ-------GFKSFVDKTVIEFPDGITCIVGPNGSGKSNILDAIRWVFGEQSPKEL 56 Query: 83 HGDSI 87 GDS+ Sbjct: 57 RGDSM 61 >gi|110678163|ref|YP_681170.1| hypothetical protein RD1_0806 [Roseobacter denitrificans OCh 114] gi|109454279|gb|ABG30484.1| hypothetical protein RD1_0806 [Roseobacter denitrificans OCh 114] Length = 683 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 4/55 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++L ++I +FR F ++EF +T+++G+NG GK+SL A +W+ YG T Sbjct: 2 RILRLKIKNFRQFYGDCELEFLSDDTSRITVIHGENGSGKTSLLNAFKWVLYGKT 56 >gi|300172911|ref|YP_003772076.1| chromosome partition protein [Leuconostoc gasicomitatum LMG 18811] gi|299887289|emb|CBL91257.1| Chromosome partition protein [Leuconostoc gasicomitatum LMG 18811] Length = 1184 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ Sbjct: 2 KLKSLEISGFKSFADKTIIEFMPGMTGIVGPNGSGKSNIIEAIRWV 47 >gi|148264525|ref|YP_001231231.1| SMC domain-containing protein [Geobacter uraniireducens Rf4] gi|146398025|gb|ABQ26658.1| SMC domain protein [Geobacter uraniireducens Rf4] Length = 699 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 4/47 (8%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +FR F Q++ F+D ++T+V+ +NG+GK++L +A+ W FYG Sbjct: 8 LENFRQFKGRQELVFSDLRERNVTVVHAENGFGKTTLLKALVWCFYG 54 >gi|257893223|ref|ZP_05672876.1| chromosome partition protein SMC [Enterococcus faecium 1,231,408] gi|257896408|ref|ZP_05676061.1| chromosome partition protein SMC [Enterococcus faecium Com12] gi|257829602|gb|EEV56209.1| chromosome partition protein SMC [Enterococcus faecium 1,231,408] gi|257832973|gb|EEV59394.1| chromosome partition protein SMC [Enterococcus faecium Com12] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|257887974|ref|ZP_05667627.1| chromosome partition protein SMC [Enterococcus faecium 1,141,733] gi|257824028|gb|EEV50960.1| chromosome partition protein SMC [Enterococcus faecium 1,141,733] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|293379493|ref|ZP_06625637.1| chromosome segregation protein SMC [Enterococcus faecium PC4.1] gi|292642016|gb|EFF60182.1| chromosome segregation protein SMC [Enterococcus faecium PC4.1] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|293570731|ref|ZP_06681781.1| chromosome segregation protein SMC [Enterococcus faecium E980] gi|291609203|gb|EFF38475.1| chromosome segregation protein SMC [Enterococcus faecium E980] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|227550769|ref|ZP_03980818.1| chromosome segregation protein Smc [Enterococcus faecium TX1330] gi|227180087|gb|EEI61059.1| chromosome segregation protein Smc [Enterococcus faecium TX1330] Length = 1191 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 4 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 46 >gi|257899382|ref|ZP_05679035.1| chromosome partition protein SMC [Enterococcus faecium Com15] gi|257837294|gb|EEV62368.1| chromosome partition protein SMC [Enterococcus faecium Com15] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|261207044|ref|ZP_05921733.1| chromosome partition protein SMC [Enterococcus faecium TC 6] gi|289565323|ref|ZP_06445773.1| chromosome segregation protein SMC [Enterococcus faecium D344SRF] gi|294614480|ref|ZP_06694395.1| chromosome segregation protein SMC [Enterococcus faecium E1636] gi|260078672|gb|EEW66374.1| chromosome partition protein SMC [Enterococcus faecium TC 6] gi|289162813|gb|EFD10663.1| chromosome segregation protein SMC [Enterococcus faecium D344SRF] gi|291592657|gb|EFF24251.1| chromosome segregation protein SMC [Enterococcus faecium E1636] Length = 1193 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|314948018|ref|ZP_07851422.1| segregation protein SMC [Enterococcus faecium TX0082] gi|313645616|gb|EFS10196.1| segregation protein SMC [Enterococcus faecium TX0082] Length = 1191 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 4 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 46 >gi|314937655|ref|ZP_07844981.1| segregation protein SMC [Enterococcus faecium TX0133a04] gi|314942846|ref|ZP_07849659.1| segregation protein SMC [Enterococcus faecium TX0133C] gi|314950936|ref|ZP_07854005.1| segregation protein SMC [Enterococcus faecium TX0133A] gi|314991416|ref|ZP_07856893.1| segregation protein SMC [Enterococcus faecium TX0133B] gi|314995063|ref|ZP_07860183.1| segregation protein SMC [Enterococcus faecium TX0133a01] gi|313590789|gb|EFR69634.1| segregation protein SMC [Enterococcus faecium TX0133a01] gi|313593896|gb|EFR72741.1| segregation protein SMC [Enterococcus faecium TX0133B] gi|313596945|gb|EFR75790.1| segregation protein SMC [Enterococcus faecium TX0133A] gi|313598318|gb|EFR77163.1| segregation protein SMC [Enterococcus faecium TX0133C] gi|313643032|gb|EFS07612.1| segregation protein SMC [Enterococcus faecium TX0133a04] Length = 1191 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 4 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 46 >gi|293556819|ref|ZP_06675380.1| chromosome segregation protein SMC [Enterococcus faecium E1039] gi|291600903|gb|EFF31194.1| chromosome segregation protein SMC [Enterococcus faecium E1039] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|260558339|ref|ZP_05830535.1| chromosome partition protein SMC [Enterococcus faecium C68] gi|260075513|gb|EEW63819.1| chromosome partition protein SMC [Enterococcus faecium C68] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|257881411|ref|ZP_05661064.1| chromosome partition protein SMC [Enterococcus faecium 1,231,502] gi|257890629|ref|ZP_05670282.1| chromosome partition protein SMC [Enterococcus faecium 1,231,410] gi|293562992|ref|ZP_06677459.1| chromosome segregation protein SMC [Enterococcus faecium E1162] gi|294621997|ref|ZP_06701141.1| chromosome segregation protein SMC [Enterococcus faecium U0317] gi|257817069|gb|EEV44397.1| chromosome partition protein SMC [Enterococcus faecium 1,231,502] gi|257826989|gb|EEV53615.1| chromosome partition protein SMC [Enterococcus faecium 1,231,410] gi|291598424|gb|EFF29497.1| chromosome segregation protein SMC [Enterococcus faecium U0317] gi|291605118|gb|EFF34585.1| chromosome segregation protein SMC [Enterococcus faecium E1162] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|114778619|ref|ZP_01453435.1| chromosome segregation SMC protein, putative [Mariprofundus ferrooxydans PV-1] gi|114551084|gb|EAU53645.1| chromosome segregation SMC protein, putative [Mariprofundus ferrooxydans PV-1] Length = 1159 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 34/57 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L IE++ F+ F + +IE + +T + G NG GKS++ +A+ W+ ++ R G Sbjct: 2 RLKRIELAGFKSFVDPTRIELGEGITAIVGPNGCGKSNIIDALRWVLGEHSARHLRG 58 >gi|294618514|ref|ZP_06698076.1| chromosome segregation protein SMC [Enterococcus faecium E1679] gi|291595214|gb|EFF26545.1| chromosome segregation protein SMC [Enterococcus faecium E1679] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|257878771|ref|ZP_05658424.1| chromosome partition protein SMC [Enterococcus faecium 1,230,933] gi|257812999|gb|EEV41757.1| chromosome partition protein SMC [Enterococcus faecium 1,230,933] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|81428323|ref|YP_395323.1| chromosome seggregation Smc protein [Lactobacillus sakei subsp. sakei 23K] gi|78609965|emb|CAI55012.1| Chromosome seggregation Smc protein [Lactobacillus sakei subsp. sakei 23K] Length = 1186 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 30/45 (66%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +L + +S F+ F + +I F+D LT + G NG GKS+++EAI W Sbjct: 2 QLKSLVLSGFKSFADKTEINFSDGLTGIVGPNGSGKSNITEAIRW 46 >gi|69246106|ref|ZP_00603812.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Enterococcus faecium DO] gi|258615163|ref|ZP_05712933.1| chromosome partition protein SMC [Enterococcus faecium DO] gi|68195401|gb|EAN09848.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Enterococcus faecium DO] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|293567879|ref|ZP_06679220.1| chromosome segregation protein SMC [Enterococcus faecium E1071] gi|291589464|gb|EFF21271.1| chromosome segregation protein SMC [Enterococcus faecium E1071] Length = 1193 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|322411351|gb|EFY02259.1| putative chromosome segregation SMC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1181 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|294140432|ref|YP_003556410.1| SMC family protein [Shewanella violacea DSS12] gi|293326901|dbj|BAJ01632.1| SMC family protein [Shewanella violacea DSS12] Length = 1136 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDSTKIPFLNPLSAIIGPNGCGKSNIIDAVRWVLGESSAKHLRGDSM 61 >gi|332139413|ref|YP_004425151.1| Recombinational DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549435|gb|AEA96153.1| Recombinational DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] Length = 362 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDS 86 KL ++I+ FR T + + + LTI+ G+NG GKSSL EA+ +L +G + R KH Sbjct: 2 KLDRVQITQFRNLTSVS-LSPSPALTIIKGENGSGKSSLIEALYYLGFGRSFRTNKHSSV 60 Query: 87 IK 88 I+ Sbjct: 61 IQ 62 >gi|323126810|gb|ADX24107.1| Putative chromosome segregation SMC [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 1181 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|255591216|ref|XP_002535467.1| structural maintenance of chromosomes smc, bacterial, putative [Ricinus communis] gi|223523015|gb|EEF26914.1| structural maintenance of chromosomes smc, bacterial, putative [Ricinus communis] Length = 333 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|325567329|ref|ZP_08143996.1| cell division protein Smc [Enterococcus casseliflavus ATCC 12755] gi|325158762|gb|EGC70908.1| cell division protein Smc [Enterococcus casseliflavus ATCC 12755] Length = 1192 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVL 48 >gi|257876181|ref|ZP_05655834.1| chromosome partition protein SMC [Enterococcus casseliflavus EC20] gi|257810347|gb|EEV39167.1| chromosome partition protein SMC [Enterococcus casseliflavus EC20] Length = 1192 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVL 48 >gi|257866577|ref|ZP_05646230.1| chromosome partition protein SMC [Enterococcus casseliflavus EC30] gi|257872907|ref|ZP_05652560.1| chromosome partition protein SMC [Enterococcus casseliflavus EC10] gi|257800535|gb|EEV29563.1| chromosome partition protein SMC [Enterococcus casseliflavus EC30] gi|257807071|gb|EEV35893.1| chromosome partition protein SMC [Enterococcus casseliflavus EC10] Length = 1192 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVL 48 >gi|251781987|ref|YP_002996289.1| chromosome partition protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390616|dbj|BAH81075.1| chromosome partition protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 1181 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|114563633|ref|YP_751146.1| chromosome segregation protein SMC [Shewanella frigidimarina NCIMB 400] gi|114334926|gb|ABI72308.1| chromosome segregation protein SMC [Shewanella frigidimarina NCIMB 400] Length = 1144 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFDNALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|109898094|ref|YP_661349.1| chromosome segregation protein SMC [Pseudoalteromonas atlantica T6c] gi|109700375|gb|ABG40295.1| chromosome segregation protein SMC [Pseudoalteromonas atlantica T6c] Length = 1164 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I F D +T + G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKKIKLAGFKSFVDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|320326173|gb|EFW82228.1| hypothetical protein PsgB076_02805 [Pseudomonas syringae pv. glycinea str. B076] Length = 874 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLYQLEVGPFRGFMRPETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|167463676|ref|ZP_02328765.1| chromosome segregation SMC protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382557|ref|ZP_08056437.1| chromosome condensation and segregation SMC ATPase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153473|gb|EFX45878.1| chromosome condensation and segregation SMC ATPase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 1192 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+S F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELSGFKSFADKTELEFVQGITAVVGPNGSGKSNISDGIRWVL 48 >gi|239993752|ref|ZP_04714276.1| Recombinational DNA repair ATPase [Alteromonas macleodii ATCC 27126] Length = 362 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDS 86 KL ++I+ FR T + + + LTI+ G+NG GKSSL EA+ +L +G + R KH Sbjct: 2 KLDRVQITQFRNLTSVS-LSPSPALTIIKGENGSGKSSLIEALYYLGFGRSFRTNKHSSV 60 Query: 87 IK 88 I+ Sbjct: 61 IQ 62 >gi|256544905|ref|ZP_05472276.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] gi|256399404|gb|EEU13010.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] Length = 1176 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRR 81 + +L +E+ F+ F KI+F + +T V G NG GKS++++AI+W+ + R Sbjct: 2 IYIRLESVELKGFKSFANRTKIKFDNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRG 61 Query: 82 KHGDSIKKRSIKTPMPMCMA 101 K D + + PM MA Sbjct: 62 KKMDDVIFQGADDKKPMNMA 81 >gi|295696067|ref|YP_003589305.1| chromosome segregation protein SMC [Bacillus tusciae DSM 2912] gi|295411669|gb|ADG06161.1| chromosome segregation protein SMC [Bacillus tusciae DSM 2912] Length = 1192 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 31/53 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +EIS F+ F + +IE +T V G NG GKS+++EA+ W+ + R G Sbjct: 6 LEISGFKSFADRTEIELPPGITAVVGPNGSGKSNIAEALRWVLGEQSARSLRG 58 >gi|167771630|ref|ZP_02443683.1| hypothetical protein ANACOL_03002 [Anaerotruncus colihominis DSM 17241] gi|167666270|gb|EDS10400.1| hypothetical protein ANACOL_03002 [Anaerotruncus colihominis DSM 17241] Length = 1192 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EI F+ F + ++ F D +T V G NG GKS++++A+ W+ Sbjct: 4 LRLRGLEIQGFKSFPDKTRLTFHDGITAVVGPNGSGKSNIADAVRWVL 51 >gi|261338544|ref|ZP_05966428.1| RecF protein [Bifidobacterium gallicum DSM 20093] gi|270276565|gb|EFA22419.1| RecF protein [Bifidobacterium gallicum DSM 20093] Length = 381 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + + HFR + E+ ++F +T++ G NG GK++L EAIE L G + R + Sbjct: 2 RITRLALDHFRSWNEVV-LDFPSGITMLQGHNGLGKTNLVEAIEVLSTGSSHRTSSSLPL 60 Query: 88 KKRSIKT 94 +R +T Sbjct: 61 VQRGQQT 67 >gi|220930091|ref|YP_002507000.1| SMC domain protein [Clostridium cellulolyticum H10] gi|220000419|gb|ACL77020.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 1036 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ ++ I FR + ++Q +F AD L ++ NGYGK+S +AIEW Sbjct: 4 KIKEVSIEAFRAYEKLQPFDFRHNDSGKIAD-LVVIYAPNGYGKTSFFDAIEWAITDEIG 62 Query: 80 RRKHGDSIKKR 90 R K D+IK+ Sbjct: 63 RLKSTDAIKQE 73 >gi|317506151|ref|ZP_07963974.1| hypothetical protein HMPREF9336_00343 [Segniliparus rugosus ATCC BAA-974] gi|316255573|gb|EFV14820.1| hypothetical protein HMPREF9336_00343 [Segniliparus rugosus ATCC BAA-974] Length = 836 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++ H+RG + + + AD +T+V G N GKSS+ EA++ LF + D+ Sbjct: 2 RLHRIKLEHYRGVRDREVVFAADGVTVVEGPNESGKSSMIEALDLLF-------EAKDAS 54 Query: 88 KKRSIKTPMP 97 K R ++ P Sbjct: 55 KTRQVRAIAP 64 >gi|209559003|ref|YP_002285475.1| Putative chromosome segregation SMC [Streptococcus pyogenes NZ131] gi|209540204|gb|ACI60780.1| Putative chromosome segregation SMC [Streptococcus pyogenes NZ131] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|206900328|ref|YP_002250664.1| chromosome segregation SMC protein, putative [Dictyoglomus thermophilum H-6-12] gi|206739431|gb|ACI18489.1| chromosome segregation SMC protein, putative [Dictyoglomus thermophilum H-6-12] Length = 1084 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+++F+ F KI F+ + T++ G NG GKS++ +AI W+ Sbjct: 4 LKSLELTNFKSFIGNNKIPFSQNFTVITGPNGSGKSNILDAIRWVL 49 >gi|139474236|ref|YP_001128952.1| chromosome partition protein [Streptococcus pyogenes str. Manfredo] gi|134272483|emb|CAM30746.1| putative chromosome partition protein [Streptococcus pyogenes str. Manfredo] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|94993855|ref|YP_601953.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10750] gi|94547363|gb|ABF37409.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10750] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|50913819|ref|YP_059791.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10394] gi|50902893|gb|AAT86608.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10394] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|15674632|ref|NP_268806.1| putative chromosome segregation SMC protein [Streptococcus pyogenes M1 GAS] gi|71910252|ref|YP_281802.1| chromosome partition protein [Streptococcus pyogenes MGAS5005] gi|13621745|gb|AAK33527.1| putative chromosome segregation SMC protein [Streptococcus pyogenes M1 GAS] gi|71853034|gb|AAZ51057.1| chromosome partition protein [Streptococcus pyogenes MGAS5005] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|56808932|ref|ZP_00366640.1| COG1196: Chromosome segregation ATPases [Streptococcus pyogenes M49 591] Length = 1179 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|302874774|ref|YP_003843407.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] gi|307690610|ref|ZP_07633056.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] gi|302577631|gb|ADL51643.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] Length = 1191 Score = 42.0 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + +IE D +T + G NG GKS++S+AI W+ Sbjct: 6 IELRGFKSFADKTEIELKDGITAIVGPNGSGKSNISDAIRWVL 48 >gi|306827818|ref|ZP_07461088.1| chromosome partition protein smc [Streptococcus pyogenes ATCC 10782] gi|304429988|gb|EFM33027.1| chromosome partition protein smc [Streptococcus pyogenes ATCC 10782] Length = 1179 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|302391435|ref|YP_003827255.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] gi|302203512|gb|ADL12190.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] Length = 684 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 7/56 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-------DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ DIE+ +F+ + Q IEFA +++T+V G+NG GK+SL A+ + YG Sbjct: 2 KIKDIELCNFKQYYGKQNIEFAGYDTDSSENVTVVYGENGRGKTSLYRALMFALYG 57 >gi|94988069|ref|YP_596170.1| chromosome partition protein [Streptococcus pyogenes MGAS9429] gi|94991955|ref|YP_600054.1| chromosome partition protein smc [Streptococcus pyogenes MGAS2096] gi|94541577|gb|ABF31626.1| chromosome partition protein [Streptococcus pyogenes MGAS9429] gi|94545463|gb|ABF35510.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS2096] Length = 1179 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|19745654|ref|NP_606790.1| chromosome segregation SMC [Streptococcus pyogenes MGAS8232] gi|19747785|gb|AAL97289.1| putative chromosome segregation SMC [Streptococcus pyogenes MGAS8232] Length = 1179 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|21909912|ref|NP_664180.1| putative chromosome condensation and segregation SMC protein [Streptococcus pyogenes MGAS315] gi|28896389|ref|NP_802739.1| chromosome segregation SMC protein [Streptococcus pyogenes SSI-1] gi|21904100|gb|AAM78983.1| putative chromosome condensation and segregation SMC protein [Streptococcus pyogenes MGAS315] gi|28811640|dbj|BAC64572.1| putative chromosome segregation SMC protein [Streptococcus pyogenes SSI-1] Length = 1175 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFYKGVTAVVGPNGSGKSNITESLRW 46 >gi|94989949|ref|YP_598049.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10270] gi|94543457|gb|ABF33505.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10270] Length = 1179 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|210622530|ref|ZP_03293223.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] gi|210154165|gb|EEA85171.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] Length = 1184 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++E+ F+ F E I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 3 LKELELKGFKSFPEKTDIVFKNGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLE 62 Query: 89 K-----RSIKTPMPMC 99 K PM C Sbjct: 63 DVIFAGSDKKKPMNYC 78 >gi|71903093|ref|YP_279896.1| chromosome partition protein smc [Streptococcus pyogenes MGAS6180] gi|71802188|gb|AAX71541.1| chromosome partition protein smc [Streptococcus pyogenes MGAS6180] Length = 1179 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIELEGFKSFADKTKIEFYKGVTAVVGPNGSGKSNITESLRW 46 >gi|319744743|gb|EFV97085.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus agalactiae ATCC 13813] Length = 1179 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKVEFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|251797475|ref|YP_003012206.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2] gi|247545101|gb|ACT02120.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2] Length = 1195 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+S F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELSGFKSFADKTEMEFVTGITAVVGPNGSGKSNISDGIRWVL 48 >gi|22536888|ref|NP_687739.1| chromosome segregation SMC protein [Streptococcus agalactiae 2603V/R] gi|25010801|ref|NP_735196.1| hypothetical protein gbs0746 [Streptococcus agalactiae NEM316] gi|76787222|ref|YP_329472.1| chromosome segregation protein SMC [Streptococcus agalactiae A909] gi|22533738|gb|AAM99611.1|AE014224_14 chromosome segregation SMC protein [Streptococcus agalactiae 2603V/R] gi|23095155|emb|CAD46390.1| Unknown [Streptococcus agalactiae NEM316] gi|76562279|gb|ABA44863.1| chromosome segregation protein SMC [Streptococcus agalactiae A909] Length = 1179 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKVEFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|327538714|gb|EGF25364.1| chromosome partition protein Smc [Rhodopirellula baltica WH47] Length = 1192 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 34/56 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E++ F+ F + + +F D +T+V G NG GKS++ +A++W+ + + G + Sbjct: 5 LELAGFKSFADRTRFDFPDGITVVVGPNGSGKSNIVDAMKWVLGSQSAKSLRGKDM 60 >gi|295397857|ref|ZP_06807920.1| SMC family domain protein [Aerococcus viridans ATCC 11563] gi|294973902|gb|EFG49666.1| SMC family domain protein [Aerococcus viridans ATCC 11563] Length = 1191 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + IEF + T + G NG GKS+++EAI+W+ Sbjct: 3 LKTVEMVGFKSFADKTTIEFDNGFTAIVGPNGSGKSNITEAIKWVL 48 >gi|160947507|ref|ZP_02094674.1| hypothetical protein PEPMIC_01441 [Parvimonas micra ATCC 33270] gi|158446641|gb|EDP23636.1| hypothetical protein PEPMIC_01441 [Parvimonas micra ATCC 33270] Length = 1178 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 32/48 (66%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEI+ F+ F + K++F ++T + G NG GKS++++A+ W+ Sbjct: 1 MRLKSIEINGFKSFADKIKLDFETNITAIIGPNGSGKSNVADAVRWVL 48 >gi|257885679|ref|ZP_05665332.1| chromosome partition protein SMC [Enterococcus faecium 1,231,501] gi|257821535|gb|EEV48665.1| chromosome partition protein SMC [Enterococcus faecium 1,231,501] Length = 1193 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + ++F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADKTVVDFENSVTAVVGPNGSGKSNITEAIRWVL 48 >gi|170017642|ref|YP_001728561.1| Barmotin [Leuconostoc citreum KM20] gi|169804499|gb|ACA83117.1| Barmotin [Leuconostoc citreum KM20] Length = 1184 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IEF +T + G NG GKS++ EA+ W+ Sbjct: 2 KLKSLEISGFKSFADKTIIEFMPGMTGIVGPNGSGKSNIIEAMRWV 47 >gi|262375657|ref|ZP_06068889.1| chromosome segregation protein SMC [Acinetobacter lwoffii SH145] gi|262309260|gb|EEY90391.1| chromosome segregation protein SMC [Acinetobacter lwoffii SH145] Length = 1150 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F D+ T V G NG GKS++ +AI W+ + R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLHFKDNRTAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|332969955|gb|EGK08955.1| SMC structural maintenance of chromosomes partitioning protein [Kingella kingae ATCC 23330] Length = 1181 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 37/64 (57%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L+ +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G Sbjct: 18 LLMRLTQIKLAGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRG 77 Query: 85 DSIK 88 +S++ Sbjct: 78 ESMQ 81 >gi|281212226|gb|EFA86386.1| putative non-transporter ABC protein [Polysphondylium pallidum PN500] Length = 1090 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ +E+S+F G ++F + ++ G+ G GKSS+ EA+ W YG T RK Sbjct: 429 KITKMELSNFSGVKGDFSVDFNPGMFMIRGKMGVGKSSIFEALVWSLYGSTSPRK 483 >gi|282898562|ref|ZP_06306550.1| RecF protein [Cylindrospermopsis raciborskii CS-505] gi|281196430|gb|EFA71339.1| RecF protein [Cylindrospermopsis raciborskii CS-505] Length = 369 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +E+ HFR + E QK+EF TI+ G N GKS+L E++E L Sbjct: 3 LQSLELRHFRNYQE-QKVEFTAPKTILVGNNAQGKSNLLESVELL 46 >gi|262369275|ref|ZP_06062603.1| chromosome segregation ATPase [Acinetobacter johnsonii SH046] gi|262315343|gb|EEY96382.1| chromosome segregation ATPase [Acinetobacter johnsonii SH046] Length = 1150 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F D+ T V G NG GKS++ +AI W+ + R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLHFKDNRTAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|224826554|ref|ZP_03699655.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gi|224601155|gb|EEG07337.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 874 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLQQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|134095199|ref|YP_001100274.1| hypothetical protein HEAR2007 [Herminiimonas arsenicoxydans] gi|133739102|emb|CAL62151.1| Conserved hypothetical protein, putative ATPase involved in DNA repair [Herminiimonas arsenicoxydans] Length = 874 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLRQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|107102069|ref|ZP_01365987.1| hypothetical protein PaerPA_01003118 [Pseudomonas aeruginosa PACS2] Length = 823 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 31 RLRQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 79 >gi|309800536|ref|ZP_07694687.1| chromosome partition protein smc [Streptococcus infantis SK1302] gi|308115847|gb|EFO53372.1| chromosome partition protein smc [Streptococcus infantis SK1302] Length = 85 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|307595308|ref|YP_003901625.1| SMC domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550509|gb|ADN50574.1| SMC domain protein [Vulcanisaeta distributa DSM 14429] Length = 826 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 31/49 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ ++ I FRGF ++ F D + I++G G GK+S+ +AIE+ YG Sbjct: 6 RISELTIRDFRGFRGEHRVVFNDGINIIHGPVGSGKTSIVQAIEYALYG 54 >gi|148508244|gb|ABQ76030.1| predicted ATPase invovled in DNA repair [uncultured haloarchaeon] Length = 667 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +E+ +FR F Q++ F+ +++T+V+G NG GK++L WLFY Sbjct: 2 ELKRLEVENFRQFYGTQEVSFSLEESNNVTVVHGDNGAGKTTLLNTFLWLFY 53 >gi|312127803|ref|YP_003992677.1| SMC domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777822|gb|ADQ07308.1| SMC domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 857 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + E Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYQETQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|160872204|ref|ZP_02062336.1| DNA replication and repair protein RecF [Rickettsiella grylli] gi|159121003|gb|EDP46341.1| DNA replication and repair protein RecF [Rickettsiella grylli] Length = 363 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++ ++FR E+ +EF+ H + G+NG GKSSL EAI +L G + R + Sbjct: 3 LFRLKTNYFRNLAELD-LEFSPHFNFIYGKNGSGKSSLLEAIYFLSLGRSFRSR 55 >gi|217077222|ref|YP_002334940.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] gi|217037077|gb|ACJ75599.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] Length = 1155 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 KL +I I+ F+ F KI + +T + G NG GKS++ EAI+W+F ++ ++ Sbjct: 4 KLKEIYINGFKSFGRPVKIPISPRITAIVGPNGSGKSNIVEAIQWVFGEHSLKQLRASEK 63 Query: 85 -DSIKKRSIKTP 95 D I K + KTP Sbjct: 64 FDMIFKGNGKTP 75 >gi|114047078|ref|YP_737628.1| chromosome segregation protein SMC [Shewanella sp. MR-7] gi|113888520|gb|ABI42571.1| chromosome segregation protein SMC [Shewanella sp. MR-7] Length = 1142 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|332298201|ref|YP_004440123.1| chromosome segregation protein SMC [Treponema brennaborense DSM 12168] gi|332181304|gb|AEE16992.1| chromosome segregation protein SMC [Treponema brennaborense DSM 12168] Length = 977 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + +IEF+D +T + G NG GKS++ +A++W+ Sbjct: 3 LKSLEVFGFKSFADRTRIEFSDGITALLGPNGCGKSNVVDAVKWVL 48 >gi|117920015|ref|YP_869207.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] gi|117612347|gb|ABK47801.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] Length = 1142 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|312864737|ref|ZP_07724968.1| chromosome segregation protein SMC [Streptococcus downei F0415] gi|311099864|gb|EFQ58077.1| chromosome segregation protein SMC [Streptococcus downei F0415] Length = 1179 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + +IEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTRIEFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|238923553|ref|YP_002937069.1| hypothetical protein EUBREC_1173 [Eubacterium rectale ATCC 33656] gi|238875228|gb|ACR74935.1| Hypothetical protein EUBREC_1173 [Eubacterium rectale ATCC 33656] Length = 802 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ I++F +++ I F D + ++N NG+GKS+L+ ++ + YG+ +++ G Sbjct: 2 KLIACHINNFGKLSDLN-INFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFE 60 Query: 88 KKRSIKTP 95 ++R + P Sbjct: 61 RERKLYKP 68 >gi|110668020|ref|YP_657831.1| ATPase invovled in DNA repair [Haloquadratum walsbyi DSM 16790] gi|109625767|emb|CAJ52202.1| predicted ATPase invovled in DNA repair [Haloquadratum walsbyi DSM 16790] Length = 667 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +E+ +FR F Q++ F+ +++T+V+G NG GK++L WLFY Sbjct: 2 ELKRLEVENFRQFYGTQEVSFSLEESNNVTVVHGDNGAGKTTLLNTFLWLFY 53 >gi|116618658|ref|YP_819029.1| condensin subunit Smc [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097505|gb|ABJ62656.1| condensin subunit Smc [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 1185 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IE +T + G NG GKS++ EAI+W+ Sbjct: 2 KLKSLEISGFKSFADKTMIELMPGMTGIIGPNGSGKSNIIEAIQWV 47 >gi|113969848|ref|YP_733641.1| chromosome segregation protein SMC [Shewanella sp. MR-4] gi|113884532|gb|ABI38584.1| chromosome segregation protein SMC [Shewanella sp. MR-4] Length = 1142 Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|327183817|gb|AEA32264.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1118] Length = 1189 Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|325957094|ref|YP_004292506.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC] gi|325333659|gb|ADZ07567.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC] Length = 1189 Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|295425202|ref|ZP_06817905.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664] gi|295064978|gb|EFG55883.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664] Length = 1188 Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F+ F E I F +T + G NG GKS+++EAI W + GD++K Sbjct: 3 LTELVIDGFKSFAEKTTIHFGSGITGIVGPNGSGKSNITEAIRWAMGESRAKTLRGDNMK 62 >gi|315038613|ref|YP_004032181.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1112] gi|312276746|gb|ADQ59386.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1112] Length = 1189 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|330830680|ref|YP_004393632.1| chromosome segregation protein SMC [Aeromonas veronii B565] gi|328805816|gb|AEB51015.1| Chromosome segregation protein SMC [Aeromonas veronii B565] Length = 1124 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 34/56 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F E +IE + +T V G NG GKS++ +A+ W+ + R G+++ Sbjct: 6 IKLAGFKSFVEPTRIELSADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGENM 61 >gi|308271408|emb|CBX28016.1| hypothetical protein N47_G33400 [uncultured Desulfobacterium sp.] Length = 1061 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 37/64 (57%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L KL +EIS F+ F + IEF + + G NG GKS++ +A++W+ + ++ G Sbjct: 5 LYMKLKSLEISGFKSFNDKANIEFPAGVCAIVGPNGCGKSNIVDALKWVMGEQSVKQLRG 64 Query: 85 DSIK 88 S++ Sbjct: 65 KSME 68 >gi|326407512|gb|ADZ64583.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis CV56] Length = 358 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL IE+ +FR + E+ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 2 KLKAIELKNFRNYEEL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSH 56 >gi|254520975|ref|ZP_05133030.1| hypothetical protein SSKA14_97 [Stenotrophomonas sp. SKA14] gi|219718566|gb|EED37091.1| hypothetical protein SSKA14_97 [Stenotrophomonas sp. SKA14] Length = 855 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 63 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 111 >gi|218782621|ref|YP_002433939.1| hypothetical protein Dalk_4794 [Desulfatibacillum alkenivorans AK-01] gi|218764005|gb|ACL06471.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 696 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + I +FR F + +IEFA ++T+ +G NG GK++L A W YG T Sbjct: 3 LIALRIENFRQFYGVHEIEFAKGNQDQNVTVFHGYNGSGKTALLNAFIWCLYGET 57 >gi|221064749|ref|ZP_03540854.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gi|220709772|gb|EED65140.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 874 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|121593676|ref|YP_985572.1| hypothetical protein Ajs_1272 [Acidovorax sp. JS42] gi|120605756|gb|ABM41496.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 874 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|218891392|ref|YP_002440259.1| COG1196: Chromosome segregation ATPases [Pseudomonas aeruginosa LESB58] gi|218771618|emb|CAW27391.1| COG1196: Chromosome segregation ATPases [Pseudomonas aeruginosa LESB58] Length = 860 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 68 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 116 >gi|94311274|ref|YP_584484.1| hypothetical protein Rmet_2338 [Cupriavidus metallidurans CH34] gi|254241425|ref|ZP_04934747.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|24461586|gb|AAN62157.1|AF440523_64 hypothetical protein [Pseudomonas aeruginosa] gi|93355126|gb|ABF09215.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] gi|126194803|gb|EAZ58866.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 874 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLG 130 >gi|1107710|emb|CAA61549.1| recF [Lactococcus lactis] Length = 357 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL IE+ +FR + E+ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 2 KLKAIELKNFRNYEEL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSH 56 >gi|222152724|ref|YP_002561901.1| chromosome partition protein [Streptococcus uberis 0140J] gi|222113537|emb|CAR41328.1| putative chromosome partition protein [Streptococcus uberis 0140J] Length = 1181 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKTIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRW 46 >gi|15673957|ref|NP_268132.1| recombination protein F [Lactococcus lactis subsp. lactis Il1403] gi|281492578|ref|YP_003354558.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis KF147] gi|13959468|sp|Q9CE70|RECF_LACLA RecName: Full=DNA replication and repair protein recF gi|12725018|gb|AAK06073.1|AE006427_8 RecF protein [Lactococcus lactis subsp. lactis Il1403] gi|281376242|gb|ADA65733.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis KF147] Length = 358 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL IE+ +FR + E+ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 2 KLKAIELKNFRNYEEL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSH 56 >gi|332685823|ref|YP_004455597.1| chromosome partition protein Smc [Melissococcus plutonius ATCC 35311] gi|332369832|dbj|BAK20788.1| chromosome partition protein Smc [Melissococcus plutonius ATCC 35311] Length = 1192 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ Sbjct: 6 IEIAGFKSFADRTIIDFENGVTAVVGPNGSGKSNITEAIRWVL 48 >gi|313890274|ref|ZP_07823908.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus SPIN 20026] gi|313121379|gb|EFR44484.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus SPIN 20026] Length = 1181 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKKIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRW 46 >gi|297584009|ref|YP_003699789.1| chromosome segregation protein SMC [Bacillus selenitireducens MLS10] gi|297142466|gb|ADH99223.1| chromosome segregation protein SMC [Bacillus selenitireducens MLS10] Length = 1188 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +E++ F+ F E I+F +T V G NG GKS++S+AI W+ + R G ++ Sbjct: 6 LELTGFKSFAEKLGIDFVPGVTAVVGPNGSGKSNISDAIRWVLGEQSARNLRGGKME 62 >gi|332522490|ref|ZP_08398742.1| chromosome segregation protein SMC [Streptococcus porcinus str. Jelinkova 176] gi|332313754|gb|EGJ26739.1| chromosome segregation protein SMC [Streptococcus porcinus str. Jelinkova 176] Length = 1181 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LKKIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRW 46 >gi|227432060|ref|ZP_03914074.1| SMC structural maintenance of chromosomes partitioning protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352177|gb|EEJ42389.1| SMC structural maintenance of chromosomes partitioning protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 1185 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +EIS F+ F + IE +T + G NG GKS++ EAI+W+ Sbjct: 2 KLKSLEISGFKSFADKTMIELMPGMTGIIGPNGSGKSNIIEAIQWV 47 >gi|24374427|ref|NP_718470.1| SMC family protein [Shewanella oneidensis MR-1] gi|24348999|gb|AAN55914.1|AE015728_3 SMC family protein [Shewanella oneidensis MR-1] Length = 1145 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|94499337|ref|ZP_01305875.1| hypothetical protein RED65_11124 [Oceanobacter sp. RED65] gi|94428969|gb|EAT13941.1| hypothetical protein RED65_11124 [Oceanobacter sp. RED65] Length = 1165 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI F +LT + G NG GKS+ +A+ W+ + + GD++ Sbjct: 2 RLKSIKLAGFKSFVDPTKIPFPTNLTCIVGPNGCGKSNTIDAVRWVMGESSAKNLRGDAM 61 >gi|217967336|ref|YP_002352842.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] gi|217336435|gb|ACK42228.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] Length = 1082 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+++F+ F KI F+ T++ G NG GKS++ +AI W+ Sbjct: 4 LKSLELTNFKSFIGNNKIPFSQKFTVITGPNGSGKSNILDAIRWVL 49 >gi|149924994|ref|ZP_01913318.1| Chromosome segregation protein SMC [Plesiocystis pacifica SIR-1] gi|149814141|gb|EDM73760.1| Chromosome segregation protein SMC [Plesiocystis pacifica SIR-1] Length = 651 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ IE+ F+ F + + + DH+T V G NG GKS++ +AI W QR KH Sbjct: 2 RIKKIEVIGFKSFADREVVVLDDHVTAVIGPNGCGKSNIVDAIRWCL--GEQRAKH 55 >gi|114563256|ref|YP_750769.1| ATPase involved in DNA repair-like protein [Shewanella frigidimarina NCIMB 400] gi|114334549|gb|ABI71931.1| ATPase involved in DNA repair-like protein [Shewanella frigidimarina NCIMB 400] Length = 686 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 8/65 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 KL+ +EI++FR F Q I+FA +T+++G+N GK++L A+ W Y T Sbjct: 1 MKLIKLEINNFRQFYGKQIIDFASESNKGVTLIHGENNGGKTALLNALRWCLYEETTDNL 60 Query: 79 QRRKH 83 Q KH Sbjct: 61 QDSKH 65 >gi|323343433|ref|ZP_08083660.1| ATPase [Prevotella oralis ATCC 33269] gi|323095252|gb|EFZ37826.1| ATPase [Prevotella oralis ATCC 33269] Length = 722 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Query: 31 DIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +I I +FR + I EF+D LT++ G NG GK++ +A++WLF Sbjct: 5 EIRIKNFRSYYGDNNIFEFSDGLTLILGDNGDGKTTFFDALQWLF 49 >gi|315644210|ref|ZP_07897380.1| SMC-like protein [Paenibacillus vortex V453] gi|315280585|gb|EFU43874.1| SMC-like protein [Paenibacillus vortex V453] Length = 756 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 31/52 (59%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 I +L I I +FRGF+ +F+ T++ G NG GK+S EA+E+ GY Sbjct: 84 IKQLKKITIENFRGFSNQFFHDFSKPYTLIYGTNGSGKTSFCEALEYSLLGY 135 >gi|269215206|ref|ZP_06159110.1| putative RecF/RecN/SMC N domain protein [Neisseria lactamica ATCC 23970] gi|269208054|gb|EEZ74509.1| putative RecF/RecN/SMC N domain protein [Neisseria lactamica ATCC 23970] Length = 852 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+ Sbjct: 31 IMRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGE 90 Query: 86 SIK 88 S++ Sbjct: 91 SMQ 93 >gi|125624542|ref|YP_001033025.1| chromosome segregation protein smc [Lactococcus lactis subsp. cremoris MG1363] gi|124493350|emb|CAL98324.1| chromosome segregation protein smc [Lactococcus lactis subsp. cremoris MG1363] gi|300071336|gb|ADJ60736.1| chromosome segregation protein SMC [Lactococcus lactis subsp. cremoris NZ9000] Length = 1174 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|325680938|ref|ZP_08160475.1| putative DNA sulfur modification protein DndD [Ruminococcus albus 8] gi|324107402|gb|EGC01681.1| putative DNA sulfur modification protein DndD [Ruminococcus albus 8] Length = 676 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 32 IEISHFRGFTEIQKIEFA-DHL---TIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I + +FR F E + F+ DH+ TI+ G NG GK+S ++A W YG T Sbjct: 6 ITLQNFRQFKEKTTVTFSTDHVKNVTIIMGDNGTGKTSFAQAFTWCLYGRTD 57 >gi|326406355|gb|ADZ63426.1| chromosome segregation SMC protein [Lactococcus lactis subsp. lactis CV56] Length = 1174 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|281491299|ref|YP_003353279.1| chromosome partition protein Smc [Lactococcus lactis subsp. lactis KF147] gi|281375040|gb|ADA64558.1| Chromosome partition protein Smc [Lactococcus lactis subsp. lactis KF147] Length = 1174 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|16506809|gb|AAL23959.1|AF426167_1 SMC protein [Lactococcus lactis] gi|16030073|emb|CAC93883.1| SMC protein [Lactococcus lactis subsp. lactis] Length = 1174 Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|328865846|gb|EGG14232.1| putative non-transporter ABC protein [Dictyostelium fasciculatum] Length = 1085 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 RK+ K +IE++ F T + +D+ + ++ GQ G GKSSL E++ W YG T Sbjct: 429 GRKVSIK--EIEVTDFCSITGPLTLSLSDYRMLMIRGQMGSGKSSLFESMVWAIYGNTSP 486 Query: 81 RKHGDS 86 RK S Sbjct: 487 RKQASS 492 >gi|288553093|ref|YP_003425028.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4] gi|288544253|gb|ADC48136.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4] Length = 1188 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E IEF +T V G NG GKS++S+A+ W+ Sbjct: 6 LEVVGFKSFAEQMNIEFVPGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|157374874|ref|YP_001473474.1| chromosome segregation protein SMC [Shewanella sediminis HAW-EB3] gi|157317248|gb|ABV36346.1| chromosome segregation protein SMC [Shewanella sediminis HAW-EB3] Length = 299 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDSTKIPFLNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|42783642|ref|NP_980889.1| hypothetical protein BCE_4596 [Bacillus cereus ATCC 10987] gi|42739571|gb|AAS43497.1| hypothetical protein BCE_4596 [Bacillus cereus ATCC 10987] Length = 879 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 7/60 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F + ++ + +FRG+ QK++F + + +++G NGYGK++L +AIEW G +R Sbjct: 6 FFISEVNMENFRGYKS-QKVKFFEEQSDKTGVVLISGPNGYGKTTLLDAIEWCLTGTVKR 64 >gi|317121791|ref|YP_004101794.1| chromosome segregation protein SMC [Thermaerobacter marianensis DSM 12885] gi|315591771|gb|ADU51067.1| chromosome segregation protein SMC [Thermaerobacter marianensis DSM 12885] Length = 1184 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +E+ F+ F + ++EF +T + G NG GKS+L +A+ W+ + R+ G ++ Sbjct: 6 LELYGFKSFADRTRLEFGPGITAIVGPNGSGKSNLVDAVRWVLGEQSARQLRGSKME 62 >gi|313885421|ref|ZP_07819171.1| DNA replication and repair protein RecF [Eremococcus coleocola ACS-139-V-Col8] gi|312619151|gb|EFR30590.1| DNA replication and repair protein RecF [Eremococcus coleocola ACS-139-V-Col8] Length = 327 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I +SH+R ++ +Q +E D LTI+ G N GK++L EAI L + R H + Sbjct: 2 KLKSIHLSHYRNYSNLQ-LELNDGLTILVGNNAQGKTNLLEAIFLLSVTKSHRTNHDQEL 60 >gi|289449493|ref|YP_003474967.1| chromosome segregation protein SMC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184040|gb|ADC90465.1| chromosome segregation protein SMC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1197 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F E IEF +T + G NG GKS++++AI W+ Sbjct: 3 LKSIELQGFKSFPERTVIEFHTGMTAIVGPNGSGKSNVTDAIRWVL 48 >gi|116511620|ref|YP_808836.1| condensin subunit Smc [Lactococcus lactis subsp. cremoris SK11] gi|116107274|gb|ABJ72414.1| condensin subunit Smc [Lactococcus lactis subsp. cremoris SK11] Length = 1174 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|251778413|ref|ZP_04821333.1| ATPase involved in DNA repair [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082728|gb|EES48618.1| ATPase involved in DNA repair [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 589 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ +I I+ F+G+ + Q+ H T+V G NG GKSS+ EAI W G Sbjct: 3 LEITNIAITGFKGYKDKQEYILG-HRTVVAGDNGLGKSSIGEAIVWALTG 51 >gi|148989270|ref|ZP_01820650.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP6-BS73] gi|147925248|gb|EDK76327.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP6-BS73] Length = 106 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|28492970|ref|NP_787131.1| recombination protein F [Tropheryma whipplei str. Twist] gi|28572178|ref|NP_788958.1| DNA replication and repair protein recF [Tropheryma whipplei TW08/27] gi|51316419|sp|Q83N51|RECF_TROWT RecName: Full=DNA replication and repair protein recF gi|51316420|sp|Q83NZ4|RECF_TROW8 RecName: Full=DNA replication and repair protein recF gi|28410309|emb|CAD66695.1| DNA replication and repair protein recF [Tropheryma whipplei TW08/27] gi|28476010|gb|AAO44100.1| recF protein [Tropheryma whipplei str. Twist] Length = 363 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I + +FR + E Q I F D L ++ G NG GK++L+EAI + G+ R + Sbjct: 9 INLRNFRNY-EYQSISFTDGLNLIRGDNGQGKTNLAEAI-YFLSGFGSHRTY 58 >gi|329117065|ref|ZP_08245782.1| chromosome segregation protein SMC [Streptococcus parauberis NCFD 2020] gi|326907470|gb|EGE54384.1| chromosome segregation protein SMC [Streptococcus parauberis NCFD 2020] Length = 1181 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W Sbjct: 3 LRRIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNVTESLRW 46 >gi|240047686|ref|YP_002961074.1| putative ABC transporter ATP-binding protein P [Mycoplasma conjunctivae HRC/581] gi|239985258|emb|CAT05271.1| Putative ABC transporter ATP-binding protein P [Mycoplasma conjunctivae] Length = 980 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 KL+ IEI F+ F + I F + + G NG GKS++++AI W+ + ++ G Sbjct: 2 KLIKIEIEGFKSFADPVSIAFDGSVVGIVGPNGSGKSNINDAIRWVLGEKSVKQLRGSNM 61 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQLK 110 D + KT P+ A+ R ++ K Sbjct: 62 DDVIFAGSKTVKPLDKAMVRLTFEDK 87 >gi|225019243|ref|ZP_03708435.1| hypothetical protein CLOSTMETH_03196 [Clostridium methylpentosum DSM 5476] gi|224947874|gb|EEG29083.1| hypothetical protein CLOSTMETH_03196 [Clostridium methylpentosum DSM 5476] Length = 1191 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + +EF D +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLELQGFKSFPDKTLLEFHDGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|93006189|ref|YP_580626.1| SMC protein-like [Psychrobacter cryohalolentis K5] gi|92393867|gb|ABE75142.1| SMC protein-like [Psychrobacter cryohalolentis K5] Length = 875 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 S A LI +++ +E+ FRGF + + + ++ ++ G NG GK+S EA+E+ G Sbjct: 71 SSKANPLIKRIVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCEALEYGLLG 128 >gi|255025286|ref|ZP_05297272.1| hypothetical protein LmonocytFSL_01352 [Listeria monocytogenes FSL J2-003] Length = 267 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 4/53 (7%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K++FK L +E +F+ + + + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KIVFKQLTLE--NFKNHKNL--VVDYEQVTQISGKNGFGKTSVGEAVTWLLYG 50 >gi|304404217|ref|ZP_07385879.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus YK9] gi|304347195|gb|EFM13027.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus YK9] Length = 1196 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S++I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDSIRWVL 48 >gi|229822808|ref|ZP_04448878.1| hypothetical protein GCWU000282_00097 [Catonella morbi ATCC 51271] gi|229787621|gb|EEP23735.1| hypothetical protein GCWU000282_00097 [Catonella morbi ATCC 51271] Length = 1177 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ F+ F + IEF +T V G NG GKS+LSEAI W+ + + G+ ++ Sbjct: 1 MTGFKSFADKTVIEFDRGMTAVVGPNGSGKSNLSEAIRWVLGEQSAKSLRGNKME 55 >gi|24379903|ref|NP_721858.1| putative chromosome segregation ATPase; SMC protein [Streptococcus mutans UA159] gi|24377881|gb|AAN59164.1|AE014983_5 putative chromosome segregation ATPase; SMC protein [Streptococcus mutans UA159] Length = 1178 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKVEFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|332992912|gb|AEF02967.1| chromosome segregation ATPase [Alteromonas sp. SN2] Length = 1155 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I F + +T V G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKKIKLAGFKSFVDPTTIPFPNEMTAVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|313901968|ref|ZP_07835384.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] gi|313467757|gb|EFR63255.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] Length = 1242 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +E+ F+ F + ++EF +T + G NG GKS+L +A+ W+ + R+ G ++ Sbjct: 6 LELYGFKSFADRTRLEFGPGITAIVGPNGSGKSNLVDAVRWVLGEQSARQLRGSRME 62 >gi|290580117|ref|YP_003484509.1| putative chromosome segregation ATPase [Streptococcus mutans NN2025] gi|254997016|dbj|BAH87617.1| putative chromosome segregation ATPase [Streptococcus mutans NN2025] Length = 1178 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTKVEFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|167630241|ref|YP_001680740.1| chromosome partition protein smc, putative [Heliobacterium modesticaldum Ice1] gi|167592981|gb|ABZ84729.1| chromosome partition protein smc, putative [Heliobacterium modesticaldum Ice1] Length = 1190 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 34/57 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 IE++ F+ F + +I + LT+V G NG GKS++++AI W+ + R G ++ Sbjct: 6 IELNGFKSFADKTEILLSPGLTVVVGPNGSGKSNVADAIRWVLGEQSPRSLRGSKME 62 >gi|323342052|ref|ZP_08082285.1| hypothetical protein HMPREF0357_10465 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464477|gb|EFY09670.1| hypothetical protein HMPREF0357_10465 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 978 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IE+ F+ F + I F D +T + G NG GKS++S+AI W+ + + G S+ Sbjct: 7 LKKIEMQGFKSFADKVVINFDDAVTGIVGPNGCGKSNISDAIRWVLGEQSVKSMRGSSM 65 >gi|261368257|ref|ZP_05981140.1| SMC family protein [Subdoligranulum variabile DSM 15176] gi|282569772|gb|EFB75307.1| SMC family protein [Subdoligranulum variabile DSM 15176] Length = 1185 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 34/57 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L ++EI F+ F + KI + +T V G NG GKS++S++I W+ + ++ G Sbjct: 2 RLKELEIQGFKSFPDRTKITIGNGITGVVGPNGSGKSNISDSIRWVLGETSSKQLRG 58 >gi|32328841|emb|CAD66596.2| SMC protein [Desulfitobacterium hafniense] Length = 1205 Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I F+ F + K+E L++V G NG GKS++++AI W+ + + G ++ Sbjct: 18 LKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKNLRGSKME 77 Query: 89 K-----RSIKTPMPM 98 S++ P+ M Sbjct: 78 DVIFSGSSVRRPVGM 92 >gi|15672785|ref|NP_266959.1| chromosome segregation SMC protein [Lactococcus lactis subsp. lactis Il1403] gi|12723724|gb|AAK04901.1|AE006313_8 chromosome segregation SMC protein [Lactococcus lactis subsp. lactis Il1403] Length = 924 Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ Sbjct: 3 LKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVL 48 >gi|219669829|ref|YP_002460264.1| chromosome segregation protein SMC [Desulfitobacterium hafniense DCB-2] gi|219540089|gb|ACL21828.1| chromosome segregation protein SMC [Desulfitobacterium hafniense DCB-2] Length = 1198 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I F+ F + K+E L++V G NG GKS++++AI W+ + + G ++ Sbjct: 11 LKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKNLRGSKME 70 Query: 89 K-----RSIKTPMPM 98 S++ P+ M Sbjct: 71 DVIFSGSSVRRPVGM 85 >gi|315302809|ref|ZP_07873572.1| putative ATPase involved in DNA repair [Listeria ivanovii FSL F6-596] gi|313628828|gb|EFR97198.1| putative ATPase involved in DNA repair [Listeria ivanovii FSL F6-596] Length = 110 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 4/53 (7%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K++FK L +E +F+ + + + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KVVFKQLTLE--NFKNHKNL--VVDYEQVTQISGKNGFGKTSIGEAVTWLLYG 50 >gi|58582036|ref|YP_201052.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426630|gb|AAW75667.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 1218 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 8/94 (8%) Query: 2 TRLRKKNTCACL----SKSLTSYYAR----KLIFKLLDIEISHFRGFTEIQKIEFADHLT 53 T R + AC+ K L ++ AR + +L I++S F+ F + + ++T Sbjct: 19 TACRSYGSRACVLASQEKRLPAWSARCPESPVPMRLSTIKLSGFKSFVDPTTLHLPTNMT 78 Query: 54 IVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 79 GIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 112 >gi|332141271|ref|YP_004427009.1| Chromosome segregation ATPase, sms [Alteromonas macleodii str. 'Deep ecotype'] gi|327551293|gb|AEA98011.1| Chromosome segregation ATPase, sms [Alteromonas macleodii str. 'Deep ecotype'] Length = 1195 Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E I F +T + G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKKIKLAGFKSFVEPTTIPFPGEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 Query: 88 KK-----RSIKTPMPMC 99 S + P+ C Sbjct: 62 TDVIFNGSSSRKPVGQC 78 >gi|148377701|ref|YP_001256577.1| ABC transporter ATP-binding protein [Mycoplasma agalactiae PG2] gi|148291747|emb|CAL59136.1| P115 Like (Mycoplasma hyorhinis) ABCtransporter ATP Binding Protein [Mycoplasma agalactiae PG2] Length = 995 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKVEAHGFKSFAEPITLHFNGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNM 61 Query: 88 KK---RSIKTPMPMCMAV 102 KT PM AV Sbjct: 62 DDVIFAGSKTAKPMDKAV 79 >gi|89895401|ref|YP_518888.1| hypothetical protein DSY2655 [Desulfitobacterium hafniense Y51] gi|89334849|dbj|BAE84444.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 1198 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I F+ F + K+E L++V G NG GKS++++AI W+ + + G ++ Sbjct: 11 LKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKNLRGSKME 70 Query: 89 K-----RSIKTPMPM 98 S++ P+ M Sbjct: 71 DVIFSGSSVRRPVGM 85 >gi|325969543|ref|YP_004245735.1| SMC domain-containing protein [Vulcanisaeta moutnovskia 768-28] gi|323708746|gb|ADY02233.1| SMC domain-containing protein [Vulcanisaeta moutnovskia 768-28] Length = 827 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 31/49 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ ++ I FRGF +I F D + I++G G GK+S+ ++IE+ YG Sbjct: 4 RINELIIRDFRGFMGENRISFNDGINIIHGPVGSGKTSIVQSIEYALYG 52 >gi|291320364|ref|YP_003515627.1| p115-like ABC transporter ATP-Binding protein [Mycoplasma agalactiae] gi|290752698|emb|CBH40672.1| P115 Like (Mycoplasma hyorhinis) ABCtransporter ATP Binding Protein [Mycoplasma agalactiae] Length = 995 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKVEAHGFKSFAEPITLHFNGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNM 61 Query: 88 KK---RSIKTPMPMCMAV 102 KT PM AV Sbjct: 62 DDVIFAGSKTAKPMDKAV 79 >gi|146296631|ref|YP_001180402.1| chromosome segregation protein SMC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410207|gb|ABP67211.1| condensin subunit Smc [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 1177 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRW 46 >gi|322515803|ref|ZP_08068748.1| recombination protein F [Streptococcus vestibularis ATCC 49124] gi|322125765|gb|EFX97083.1| recombination protein F [Streptococcus vestibularis ATCC 49124] Length = 366 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 3 LEKIDIQHFRNYTE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTR 55 >gi|15839147|ref|NP_299835.1| chromosome segregation protein [Xylella fastidiosa 9a5c] gi|9107770|gb|AAF85355.1|AE004063_4 chromosome segregation protein [Xylella fastidiosa 9a5c] Length = 1167 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTCIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|258592175|emb|CBE68484.1| putative Chromosome partition protein smc [NC10 bacterium 'Dutch sediment'] Length = 1199 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + F+ F E ++ F +T + G NG GKS+LS+AI W + + GD + Sbjct: 2 RLLRLTAFGFKSFAEKVEVTFEPGVTAIVGPNGCGKSNLSDAIRWALGEQSAKLLRGDRM 61 Query: 88 KK-----RSIKTPMPM 98 S++ P+ M Sbjct: 62 DDLIFAGNSVRKPLGM 77 >gi|188585991|ref|YP_001917536.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350678|gb|ACB84948.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] Length = 1191 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E E +D +T V G NG GKS++S+AI W+ Sbjct: 5 LELVGFKSFPEKTTFELSDGITAVVGPNGCGKSNISDAIRWVL 47 >gi|228478114|ref|ZP_04062725.1| DNA replication and repair protein RecF [Streptococcus salivarius SK126] gi|228250294|gb|EEK09547.1| DNA replication and repair protein RecF [Streptococcus salivarius SK126] Length = 366 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 3 LEKIDIQHFRNYTETS-VSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTR 55 >gi|288905743|ref|YP_003430965.1| Chromosome segregation protein SMC [Streptococcus gallolyticus UCN34] gi|325978775|ref|YP_004288491.1| chromosome partition protein smc [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732469|emb|CBI14041.1| Chromosome segregation protein SMC [Streptococcus gallolyticus UCN34] gi|325178703|emb|CBZ48747.1| chromosome partition protein smc [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 1179 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|329118035|ref|ZP_08246748.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465923|gb|EGF12195.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria bacilliformis ATCC BAA-1200] Length = 1162 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|306831840|ref|ZP_07464996.1| cell division protein Smc [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426038|gb|EFM29154.1| cell division protein Smc [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 1179 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|218767667|ref|YP_002342179.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491] gi|121051675|emb|CAM07978.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491] Length = 1161 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEVSAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|15615050|ref|NP_243353.1| chromosome segregation SMC protein [Bacillus halodurans C-125] gi|10175107|dbj|BAB06206.1| chromosome segregation SMC protein [Bacillus halodurans C-125] Length = 1188 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F E +EF +T V G NG GKS++S+ I W+ + + G ++ Sbjct: 6 LEIVGFKSFAEQMTVEFVKGVTAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGSKMQ 62 >gi|293364020|ref|ZP_06610756.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] gi|292552510|gb|EFF41284.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] Length = 981 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ IE F+ F + + F +T + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKIEAHGFKSFADPVTLHFDGGVTGIVGPNGSGKSNINDAIKWVLGEQSSKELRGDNM 61 >gi|312864128|ref|ZP_07724363.1| DNA replication and repair protein RecF [Streptococcus vestibularis F0396] gi|311100360|gb|EFQ58568.1| DNA replication and repair protein RecF [Streptococcus vestibularis F0396] Length = 366 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 3 LEKIDIQHFRNYTE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTR 55 >gi|306833963|ref|ZP_07467087.1| cell division protein Smc [Streptococcus bovis ATCC 700338] gi|304423964|gb|EFM27106.1| cell division protein Smc [Streptococcus bovis ATCC 700338] Length = 1179 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|291519530|emb|CBK74751.1| RecF/RecN/SMC N terminal domain [Butyrivibrio fibrisolvens 16/4] Length = 221 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ + ++ G S++ Sbjct: 3 LKSIELYGFKSFAHKMKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGASMQ 62 >gi|254425299|ref|ZP_05039017.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] gi|196192788|gb|EDX87752.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] Length = 1007 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +++ +F + E+ ++FA H+ V G NG GKSSL EAI W +G ++ D +++ Sbjct: 11 LKLQNFLSYQEVV-LDFAGLHVACVCGPNGAGKSSLLEAIAWCIWGQSRVSAEDDIVRQG 69 Query: 91 SIKTPMPMC 99 S++ + C Sbjct: 70 SLEAQVSFC 78 >gi|310641510|ref|YP_003946268.1| chromosome segregation protein smc [Paenibacillus polymyxa SC2] gi|309246460|gb|ADO56027.1| Chromosome segregation protein SMC [Paenibacillus polymyxa SC2] Length = 1189 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|308068622|ref|YP_003870227.1| Chromosome partition protein smc [Paenibacillus polymyxa E681] gi|305857901|gb|ADM69689.1| Chromosome partition protein smc [Paenibacillus polymyxa E681] Length = 1189 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|313678608|ref|YP_004056348.1| chromosome segregation protein SMC [Mycoplasma bovis PG45] gi|312950128|gb|ADR24723.1| chromosome segregation protein SMC [Mycoplasma bovis PG45] Length = 992 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKVEAHGFKSFAEPITLRFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNM 61 Query: 88 KK---RSIKTPMPMCMAV 102 KT PM AV Sbjct: 62 DDVIFAGSKTAKPMDKAV 79 >gi|289679590|ref|ZP_06500480.1| chromosome segregation protein SMC [Pseudomonas syringae pv. syringae FF5] Length = 64 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|323702684|ref|ZP_08114345.1| chromosome segregation protein SMC [Desulfotomaculum nigrificans DSM 574] gi|323532347|gb|EGB22225.1| chromosome segregation protein SMC [Desulfotomaculum nigrificans DSM 574] Length = 1187 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++I F+ F + K+E LT+V G NG GKS++S+AI W Sbjct: 6 LDIQGFKSFADRIKLELNPGLTVVVGPNGSGKSNISDAISW 46 >gi|257458232|ref|ZP_05623382.1| chromosome segregation protein SMC [Treponema vincentii ATCC 35580] gi|257444342|gb|EEV19435.1| chromosome segregation protein SMC [Treponema vincentii ATCC 35580] Length = 982 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 31/46 (67%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +IEFA+ +T + G NG GKS++ +A++W+ Sbjct: 3 LKSLEIFGFKSFADRTRIEFAEGITALLGPNGCGKSNVVDAMKWVL 48 >gi|253573488|ref|ZP_04850831.1| chromosome segregation protein SMC [Paenibacillus sp. oral taxon 786 str. D14] gi|251847016|gb|EES75021.1| chromosome segregation protein SMC [Paenibacillus sp. oral taxon 786 str. D14] Length = 1190 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|149374975|ref|ZP_01892748.1| chromosome segregation SMC protein [Marinobacter algicola DG893] gi|149360864|gb|EDM49315.1| chromosome segregation SMC protein [Marinobacter algicola DG893] Length = 1164 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLSGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGESM 61 >gi|148548173|ref|YP_001268275.1| DNA repair ATPase-like protein [Pseudomonas putida F1] gi|148512231|gb|ABQ79091.1| ATPase involved in DNA repair-like protein [Pseudomonas putida F1] Length = 929 Score = 40.0 bits (92), Expect = 0.095, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L K L + I +FRG + + LT+++ NG GKS++ A+EWL G Sbjct: 4 LPIKFLAVTIQNFRGIPDELVVPLDAPLTVIHAANGTGKSTICYALEWLVTG 55 >gi|315648180|ref|ZP_07901281.1| chromosome segregation protein SMC [Paenibacillus vortex V453] gi|315276826|gb|EFU40169.1| chromosome segregation protein SMC [Paenibacillus vortex V453] Length = 1189 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|304440216|ref|ZP_07400106.1| possible chromosome segregation protein Smc [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371265|gb|EFM24881.1| possible chromosome segregation protein Smc [Peptoniphilus duerdenii ATCC BAA-1640] Length = 1182 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ F + KIEF + +T V G NG GKS++S+AI W+ Sbjct: 3 LKSLTMQGFKSFADKTKIEFDNEITGVVGPNGSGKSNISDAIMWVL 48 >gi|254523223|ref|ZP_05135278.1| chromosome segregation protein SMC [Stenotrophomonas sp. SKA14] gi|219720814|gb|EED39339.1| chromosome segregation protein SMC [Stenotrophomonas sp. SKA14] Length = 1167 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|190575036|ref|YP_001972881.1| putative chromosome partition protein [Stenotrophomonas maltophilia K279a] gi|190012958|emb|CAQ46590.1| putative chromosome partition protein [Stenotrophomonas maltophilia K279a] Length = 1181 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS+ Sbjct: 16 RLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 75 >gi|229918298|ref|YP_002886944.1| SMC domain protein [Exiguobacterium sp. AT1b] gi|229469727|gb|ACQ71499.1| SMC domain protein [Exiguobacterium sp. AT1b] Length = 672 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 17/71 (23%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 I +FR + IEFA ++T+++G+NG GK++L A+ W FYG Sbjct: 8 IENFRQYYGQNTIEFAHGSSKNVTVIHGENGSGKTALLTALIWGFYG------------- 54 Query: 90 RSIKTPMPMCM 100 R +K P P + Sbjct: 55 RELKLPNPESI 65 >gi|194366359|ref|YP_002028969.1| chromosome segregation protein SMC [Stenotrophomonas maltophilia R551-3] gi|194349163|gb|ACF52286.1| chromosome segregation protein SMC [Stenotrophomonas maltophilia R551-3] Length = 1167 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|125973444|ref|YP_001037354.1| condensin subunit Smc [Clostridium thermocellum ATCC 27405] gi|125713669|gb|ABN52161.1| condensin subunit Smc [Clostridium thermocellum ATCC 27405] Length = 1190 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F + ++EF +T V G NG GKS++S+AI W+ Sbjct: 6 LEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVL 48 >gi|332362455|gb|EGJ40255.1| cell division protein Smc [Streptococcus sanguinis SK1056] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|332358949|gb|EGJ36770.1| cell division protein Smc [Streptococcus sanguinis SK49] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|332358678|gb|EGJ36501.1| cell division protein Smc [Streptococcus sanguinis SK355] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|327490289|gb|EGF22077.1| cell division protein Smc [Streptococcus sanguinis SK1058] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|327461015|gb|EGF07348.1| cell division protein Smc [Streptococcus sanguinis SK1057] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325694851|gb|EGD36756.1| cell division protein Smc [Streptococcus sanguinis SK150] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325282892|ref|YP_004255433.1| SMC domain-containing protein [Deinococcus proteolyticus MRP] gi|324314701|gb|ADY25816.1| SMC domain protein [Deinococcus proteolyticus MRP] Length = 1101 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 27/44 (61%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F+ F++ IEF +T V G NG GKS++ EA+ W+ +G R Sbjct: 10 FKSFSQRTHIEFEPGITAVIGPNGSGKSNVVEALRWVTHGARAR 53 >gi|323351216|ref|ZP_08086872.1| cell division protein Smc [Streptococcus sanguinis VMC66] gi|322122440|gb|EFX94151.1| cell division protein Smc [Streptococcus sanguinis VMC66] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|322385040|ref|ZP_08058690.1| cell division protein Smc [Streptococcus cristatus ATCC 51100] gi|321270950|gb|EFX53860.1| cell division protein Smc [Streptococcus cristatus ATCC 51100] Length = 1178 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|281417644|ref|ZP_06248664.1| chromosome segregation protein SMC [Clostridium thermocellum JW20] gi|281409046|gb|EFB39304.1| chromosome segregation protein SMC [Clostridium thermocellum JW20] gi|316940319|gb|ADU74353.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 1313] Length = 1190 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F + ++EF +T V G NG GKS++S+AI W+ Sbjct: 6 LEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVL 48 >gi|125624996|ref|YP_001033479.1| recombination protein F [Lactococcus lactis subsp. cremoris MG1363] gi|166220713|sp|A2RNA8|RECF_LACLM RecName: Full=DNA replication and repair protein recF gi|124493804|emb|CAL98796.1| DNA replication and repair protein recF [Lactococcus lactis subsp. cremoris MG1363] gi|300071794|gb|ADJ61194.1| recombination protein F [Lactococcus lactis subsp. cremoris NZ9000] Length = 359 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL IE+ +FR + ++ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 2 KLKQIELKNFRNYEDL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSH 56 >gi|117619753|ref|YP_855768.1| chromosome segregation protein SMC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561160|gb|ABK38108.1| chromosome segregation protein SMC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1124 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 33/56 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F E +IE +T V G NG GKS++ +A+ W+ + R G+++ Sbjct: 6 IKLAGFKSFVEPTRIELNADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGENM 61 >gi|325917959|ref|ZP_08180128.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] gi|325535816|gb|EGD07643.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|324991497|gb|EGC23430.1| cell division protein Smc [Streptococcus sanguinis SK353] Length = 1178 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|294670151|ref|ZP_06735076.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308078|gb|EFE49321.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 1161 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|254804429|ref|YP_003082650.1| chromosome segregation protein [Neisseria meningitidis alpha14] gi|254667971|emb|CBA04250.1| chromosome segregation protein [Neisseria meningitidis alpha14] Length = 1161 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325207588|gb|ADZ03040.1| chromosome segregation protein SMC [Neisseria meningitidis NZ-05/33] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325203636|gb|ADY99089.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240355] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325143894|gb|EGC66206.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240013] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|324994822|gb|EGC26735.1| cell division protein Smc [Streptococcus sanguinis SK678] Length = 1178 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|319637793|ref|ZP_07992559.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] gi|317400948|gb|EFV81603.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|309379614|emb|CBX21785.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|304388228|ref|ZP_07370348.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] gi|304337755|gb|EFM03904.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|1237015|dbj|BAA10977.1| ORF4 [Bacillus subtilis] Length = 1188 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ G + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGGQSARSLRGGKME 62 >gi|327463121|gb|EGF09442.1| cell division protein Smc [Streptococcus sanguinis SK1] gi|327474732|gb|EGF20137.1| cell division protein Smc [Streptococcus sanguinis SK408] Length = 1178 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325687263|gb|EGD29285.1| cell division protein Smc [Streptococcus sanguinis SK72] Length = 1178 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325206603|gb|ADZ02056.1| chromosome segregation protein SMC [Neisseria meningitidis M04-240196] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325202666|gb|ADY98120.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240149] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325133939|gb|EGC56595.1| chromosome segregation protein SMC [Neisseria meningitidis M13399] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325129675|gb|EGC52489.1| chromosome segregation protein SMC [Neisseria meningitidis OX99.30304] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|312126265|ref|YP_003991139.1| DNA replication and repair protein recf [Caldicellulosiruptor hydrothermalis 108] gi|311776284|gb|ADQ05770.1| DNA replication and repair protein RecF [Caldicellulosiruptor hydrothermalis 108] Length = 353 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +I I +FRG+ + + EF D + ++ G N GK+SL EA+ + G + + + D+I Sbjct: 2 KIKNIYIENFRGYKQ-RFFEFKDKMNLIVGNNASGKTSLLEALYFCICGKSFKSRDVDAI 60 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 S + M V +Y + Sbjct: 61 NFDSYYFKLEMSAEVGNIEYNV 82 >gi|296314914|ref|ZP_06864855.1| SMC family protein [Neisseria polysaccharea ATCC 43768] gi|296838099|gb|EFH22037.1| SMC family protein [Neisseria polysaccharea ATCC 43768] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|256005340|ref|ZP_05430305.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 2360] gi|255990659|gb|EEU00776.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 2360] Length = 1210 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F + ++EF +T V G NG GKS++S+AI W+ Sbjct: 6 LEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVL 48 >gi|255065092|ref|ZP_05316947.1| SMC family protein [Neisseria sicca ATCC 29256] gi|255050513|gb|EET45977.1| SMC family protein [Neisseria sicca ATCC 29256] Length = 1160 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|241758637|ref|ZP_04756751.1| chromosome segregation protein SMC [Neisseria flavescens SK114] gi|241321148|gb|EER57344.1| chromosome segregation protein SMC [Neisseria flavescens SK114] Length = 1161 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|220928146|ref|YP_002505055.1| chromosome segregation protein SMC [Clostridium cellulolyticum H10] gi|219998474|gb|ACL75075.1| chromosome segregation protein SMC [Clostridium cellulolyticum H10] Length = 1190 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 7/54 (12%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 Y RKL EI F+ F + ++F + +T V G NG GKS++S+A+ W+ Sbjct: 2 YLRKL-------EIQGFKSFADKISLDFNNGITAVVGPNGSGKSNISDAVRWVL 48 >gi|116512900|ref|YP_811807.1| recombination protein F [Lactococcus lactis subsp. cremoris SK11] gi|123025165|sp|Q02WH8|RECF_LACLS RecName: Full=DNA replication and repair protein recF gi|116108554|gb|ABJ73694.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. cremoris SK11] Length = 359 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL IE+ +FR + ++ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 2 KLKQIELKNFRNYEDL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSH 56 >gi|261393084|emb|CAX50681.1| SMC protein [Neisseria meningitidis 8013] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|253578968|ref|ZP_04856239.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849911|gb|EES77870.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 243 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + R G +++ Sbjct: 3 LKNIEVQGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSARSLRGGNMQ 62 >gi|240128717|ref|ZP_04741378.1| hypothetical protein NgonS_08832 [Neisseria gonorrhoeae SK-93-1035] gi|268687103|ref|ZP_06153965.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627387|gb|EEZ59787.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|261365297|ref|ZP_05978180.1| SMC family protein [Neisseria mucosa ATCC 25996] gi|288566221|gb|EFC87781.1| SMC family protein [Neisseria mucosa ATCC 25996] Length = 1160 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|312965417|ref|ZP_07779649.1| putative exonuclease [Escherichia coli 2362-75] gi|312289837|gb|EFR17725.1| putative exonuclease [Escherichia coli 2362-75] gi|323159374|gb|EFZ45359.1| ATP-dependent exoDNAse [Escherichia coli E128010] Length = 653 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 5/70 (7%) Query: 28 KLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I++ +FR F E+ ++ F + LTI+ G NG GK+++ +A+ LF + +R S Sbjct: 2 KIEKIKLQNFRCFGHEVVELNFEEELTILVGGNGSGKTAVLQAVSRLFGTTSAQR----S 57 Query: 87 IKKRSIKTPM 96 +++R P+ Sbjct: 58 VQRRDFHIPI 67 >gi|332367147|gb|EGJ44883.1| cell division protein Smc [Streptococcus sanguinis SK1059] Length = 1178 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|328946756|gb|EGG40894.1| cell division protein Smc [Streptococcus sanguinis SK1087] Length = 1178 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|324993857|gb|EGC25776.1| cell division protein Smc [Streptococcus sanguinis SK405] Length = 1178 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|125718367|ref|YP_001035500.1| structural maintenance of chromosome protein (chromosome segregation ATPase) [Streptococcus sanguinis SK36] gi|125498284|gb|ABN44950.1| Structural maintenance of chromosome protein (chromosome segregation ATPase), putative [Streptococcus sanguinis SK36] Length = 1178 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|313668974|ref|YP_004049258.1| hypothetical protein NLA_16940 [Neisseria lactamica ST-640] gi|313006436|emb|CBN87899.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|240014697|ref|ZP_04721610.1| hypothetical protein NgonD_08643 [Neisseria gonorrhoeae DGI18] gi|240121219|ref|ZP_04734181.1| hypothetical protein NgonPI_05513 [Neisseria gonorrhoeae PID24-1] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|325696124|gb|EGD38015.1| cell division protein Smc [Streptococcus sanguinis SK160] Length = 1178 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325141757|gb|EGC64209.1| chromosome segregation protein SMC [Neisseria meningitidis 961-5945] gi|325197757|gb|ADY93213.1| chromosome segregation protein SMC [Neisseria meningitidis G2136] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|320535949|ref|ZP_08036014.1| segregation protein SMC [Treponema phagedenis F0421] gi|320147200|gb|EFW38751.1| segregation protein SMC [Treponema phagedenis F0421] Length = 1028 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 31/46 (67%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +IEF++ +T + G NG GKS++ +AI+W+ Sbjct: 3 LKSLEIFGFKSFADRTRIEFSEGITALLGPNGCGKSNVVDAIKWVL 48 >gi|317164767|gb|ADV08308.1| hypothetical protein NGTW08_1343 [Neisseria gonorrhoeae TCDC-NG08107] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|316985405|gb|EFV64353.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] gi|325200767|gb|ADY96222.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|302872030|ref|YP_003840666.1| SMC domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574889|gb|ADL42680.1| SMC domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 857 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|254671447|emb|CBA08972.1| putative chromosome partition protein [Neisseria meningitidis alpha153] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|240126328|ref|ZP_04739214.1| hypothetical protein NgonSK_09014 [Neisseria gonorrhoeae SK-92-679] gi|268684913|ref|ZP_06151775.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268625197|gb|EEZ57597.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|240118508|ref|ZP_04732570.1| hypothetical protein NgonPID_08607 [Neisseria gonorrhoeae PID1] gi|268604217|ref|ZP_06138384.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268588348|gb|EEZ53024.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|239999520|ref|ZP_04719444.1| hypothetical protein Ngon3_08551 [Neisseria gonorrhoeae 35/02] gi|240017144|ref|ZP_04723684.1| hypothetical protein NgonFA_08246 [Neisseria gonorrhoeae FA6140] gi|240113429|ref|ZP_04727919.1| hypothetical protein NgonM_07664 [Neisseria gonorrhoeae MS11] gi|268595333|ref|ZP_06129500.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268599502|ref|ZP_06133669.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268548722|gb|EEZ44140.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268583633|gb|EEZ48309.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|261378219|ref|ZP_05982792.1| SMC family protein [Neisseria cinerea ATCC 14685] gi|269145294|gb|EEZ71712.1| SMC family protein [Neisseria cinerea ATCC 14685] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|221231941|ref|YP_002511093.1| chromosome partition protein [Streptococcus pneumoniae ATCC 700669] gi|220674401|emb|CAR68951.1| putative chromosome partition protein [Streptococcus pneumoniae ATCC 700669] Length = 1179 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|194099237|ref|YP_002002328.1| hypothetical protein NGK_1703 [Neisseria gonorrhoeae NCCP11945] gi|254494237|ref|ZP_05107408.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|193934527|gb|ACF30351.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|226513277|gb|EEH62622.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|169834374|ref|YP_001694677.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] gi|168996876|gb|ACA37488.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] Length = 1179 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|161869474|ref|YP_001598641.1| hypothetical protein NMCC_0486 [Neisseria meningitidis 053442] gi|161595027|gb|ABX72687.1| conserved hypothetical protein [Neisseria meningitidis 053442] gi|319409923|emb|CBY90248.1| SMC protein [Neisseria meningitidis WUE 2594] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|121634340|ref|YP_974585.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|120866046|emb|CAM09784.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|325131781|gb|EGC54482.1| chromosome segregation protein SMC [Neisseria meningitidis M6190] gi|325137671|gb|EGC60248.1| chromosome segregation protein SMC [Neisseria meningitidis ES14902] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|59801785|ref|YP_208497.1| hypothetical protein NGO1443 [Neisseria gonorrhoeae FA 1090] gi|293398567|ref|ZP_06642745.1| chromosome segregation protein SMC [Neisseria gonorrhoeae F62] gi|59718680|gb|AAW90085.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|291611038|gb|EFF40135.1| chromosome segregation protein SMC [Neisseria gonorrhoeae F62] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|312877256|ref|ZP_07737224.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795970|gb|EFR12331.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 369 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|240081217|ref|ZP_04725760.1| hypothetical protein NgonF_07900 [Neisseria gonorrhoeae FA19] gi|268597327|ref|ZP_06131494.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268551115|gb|EEZ46134.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 1161 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|92112829|ref|YP_572757.1| chromosome segregation protein SMC [Chromohalobacter salexigens DSM 3043] gi|91795919|gb|ABE58058.1| Chromosome segregation protein SMC [Chromohalobacter salexigens DSM 3043] Length = 1164 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++ F+ F + + FA ++T + G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLTSIKLVGFKSFVDAVNVPFAGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGESM 61 >gi|325690807|gb|EGD32808.1| cell division protein Smc [Streptococcus sanguinis SK115] Length = 1178 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|261408032|ref|YP_003244273.1| chromosome segregation protein SMC [Paenibacillus sp. Y412MC10] gi|261284495|gb|ACX66466.1| chromosome segregation protein SMC [Paenibacillus sp. Y412MC10] Length = 1189 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|194398150|ref|YP_002037847.1| chromosome segregation protein smc [Streptococcus pneumoniae G54] gi|194357817|gb|ACF56265.1| chromosome segregation protein smc, putative [Streptococcus pneumoniae G54] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|332203095|gb|EGJ17163.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA47901] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|332074580|gb|EGI85054.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA17545] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|319787336|ref|YP_004146811.1| chromosome segregation protein SMC [Pseudoxanthomonas suwonensis 11-1] gi|317465848|gb|ADV27580.1| chromosome segregation protein SMC [Pseudoxanthomonas suwonensis 11-1] Length = 1178 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS+ Sbjct: 13 RLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 72 >gi|311694424|gb|ADP97297.1| chromosome segregation protein SMC [marine bacterium HP15] Length = 1164 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLSGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGESM 61 >gi|307708795|ref|ZP_07645257.1| chromosome partition protein smc [Streptococcus mitis NCTC 12261] gi|307615161|gb|EFN94372.1| chromosome partition protein smc [Streptococcus mitis NCTC 12261] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|303229657|ref|ZP_07316445.1| chromosome segregation protein SMC [Veillonella atypica ACS-134-V-Col7a] gi|302515782|gb|EFL57736.1| chromosome segregation protein SMC [Veillonella atypica ACS-134-V-Col7a] Length = 1184 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|302380382|ref|ZP_07268852.1| chromosome segregation protein SMC [Finegoldia magna ACS-171-V-Col3] gi|303233781|ref|ZP_07320435.1| chromosome segregation protein SMC [Finegoldia magna BVS033A4] gi|302311872|gb|EFK93883.1| chromosome segregation protein SMC [Finegoldia magna ACS-171-V-Col3] gi|302495215|gb|EFL54967.1| chromosome segregation protein SMC [Finegoldia magna BVS033A4] Length = 1167 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ ++ Sbjct: 3 LKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNKMQ 62 >gi|254429632|ref|ZP_05043339.1| chromosome segregation protein SMC [Alcanivorax sp. DG881] gi|196195801|gb|EDX90760.1| chromosome segregation protein SMC [Alcanivorax sp. DG881] Length = 1165 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + F ++LT V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTTNFPENLTAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGESM 61 >gi|148998679|ref|ZP_01826118.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP11-BS70] gi|168491167|ref|ZP_02715310.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC0288-04] gi|168575702|ref|ZP_02721617.1| chromosome segregation protein SMC [Streptococcus pneumoniae MLV-016] gi|307067895|ref|YP_003876861.1| chromosome segregation ATPase [Streptococcus pneumoniae AP200] gi|147755516|gb|EDK62564.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP11-BS70] gi|183574446|gb|EDT94974.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC0288-04] gi|183578276|gb|EDT98804.1| chromosome segregation protein SMC [Streptococcus pneumoniae MLV-016] gi|306409432|gb|ADM84859.1| Chromosome segregation ATPase [Streptococcus pneumoniae AP200] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|15903169|ref|NP_358719.1| chromosome condensation and segregation SMC protein [Streptococcus pneumoniae R6] gi|116515906|ref|YP_816575.1| chromosome segregation protein SMC [Streptococcus pneumoniae D39] gi|15458753|gb|AAK99929.1| chromosome condensation and segregation SMC protein [Streptococcus pneumoniae R6] gi|116076482|gb|ABJ54202.1| chromosome segregation protein SMC [Streptococcus pneumoniae D39] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|329929594|ref|ZP_08283301.1| chromosome segregation protein SMC [Paenibacillus sp. HGF5] gi|328936239|gb|EGG32691.1| chromosome segregation protein SMC [Paenibacillus sp. HGF5] Length = 1189 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ Sbjct: 6 IELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVL 48 >gi|320547231|ref|ZP_08041524.1| SMC family domain protein [Streptococcus equinus ATCC 9812] gi|320448119|gb|EFW88869.1| SMC family domain protein [Streptococcus equinus ATCC 9812] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|312793323|ref|YP_004026246.1| SMC domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180463|gb|ADQ40633.1| SMC domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 857 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|303231138|ref|ZP_07317878.1| chromosome segregation protein SMC [Veillonella atypica ACS-049-V-Sch6] gi|302514269|gb|EFL56271.1| chromosome segregation protein SMC [Veillonella atypica ACS-049-V-Sch6] Length = 1184 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|240124052|ref|ZP_04737008.1| hypothetical protein NgonP_08948 [Neisseria gonorrhoeae PID332] gi|268682678|ref|ZP_06149540.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268622962|gb|EEZ55362.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|240116224|ref|ZP_04730286.1| hypothetical protein NgonPID1_08280 [Neisseria gonorrhoeae PID18] gi|260439963|ref|ZP_05793779.1| hypothetical protein NgonDG_02565 [Neisseria gonorrhoeae DGI2] gi|268601886|ref|ZP_06136053.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|291043248|ref|ZP_06568971.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|268586017|gb|EEZ50693.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|291012854|gb|EFE04837.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|161507713|ref|YP_001577670.1| chromosome segregation protein Smc [Lactobacillus helveticus DPC 4571] gi|160348702|gb|ABX27376.1| Chromosome segregation protein Smc [Lactobacillus helveticus DPC 4571] Length = 1189 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGTNMK 62 >gi|327470652|gb|EGF16108.1| cell division protein Smc [Streptococcus sanguinis SK330] Length = 1178 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|325567925|ref|ZP_08144426.1| ATP-dependent OLD family endonuclease [Enterococcus casseliflavus ATCC 12755] gi|325158399|gb|EGC70549.1| ATP-dependent OLD family endonuclease [Enterococcus casseliflavus ATCC 12755] Length = 373 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++I +FR ++Q I F D T + G NG GKSS+ A++W F Y + D Sbjct: 2 KIKSVKIKNFRALRDVQ-IGFEDITTFI-GPNGAGKSSIMYALDWFFNAYGKNNNLSD 57 >gi|325135865|gb|EGC58477.1| chromosome segregation protein SMC [Neisseria meningitidis M0579] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|308388730|gb|ADO31050.1| hypothetical protein NMBB_0592 [Neisseria meningitidis alpha710] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|307704937|ref|ZP_07641828.1| chromosome segregation protein SMC [Streptococcus mitis SK597] gi|307621551|gb|EFO00597.1| chromosome segregation protein SMC [Streptococcus mitis SK597] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|301168368|emb|CBW27958.1| chromosome partition protein [Bacteriovorax marinus SJ] Length = 1264 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ A+ + KL + I F+ F + I F D +T + G NG GKS++ +A+ W+ + Sbjct: 31 TFQAKDALVKLKRLVIQGFKSFKDRTTIHFDDGITGIVGPNGCGKSNIVDALFWVMGEQS 90 Query: 79 QRRKHGDSIK 88 + G S+K Sbjct: 91 AKHLRGKSMK 100 >gi|254671825|emb|CBA03959.1| putative chromosome partition protein [Neisseria meningitidis alpha275] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|323340722|ref|ZP_08080974.1| cell division protein Smc [Lactobacillus ruminis ATCC 25644] gi|323091845|gb|EFZ34465.1| cell division protein Smc [Lactobacillus ruminis ATCC 25644] Length = 1180 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + +S F+ F + IEF D LT V G NG GKS++ E + W+ + + G + Sbjct: 2 RIKSLTLSGFKSFADKTTIEFQDGLTGVVGPNGSGKSNIIEGLRWVLGEQSAKNLRGGKM 61 Query: 88 KK-----RSIKTPMPMCM 100 + P+ CM Sbjct: 62 PDVIFAGSQTRAPLNRCM 79 >gi|149019238|ref|ZP_01834600.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] gi|147931108|gb|EDK82087.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|148993856|ref|ZP_01823258.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|168489074|ref|ZP_02713273.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|147927681|gb|EDK78706.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|183572487|gb|EDT93015.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|301794329|emb|CBW36754.1| putative chromosome partition protein [Streptococcus pneumoniae INV104] gi|332073585|gb|EGI84064.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA17570] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|149007090|ref|ZP_01830759.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP18-BS74] gi|307127163|ref|YP_003879194.1| chromosome segregation protein SMC [Streptococcus pneumoniae 670-6B] gi|147761394|gb|EDK68360.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP18-BS74] gi|306484225|gb|ADM91094.1| chromosome segregation protein SMC [Streptococcus pneumoniae 670-6B] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|15676451|ref|NP_273590.1| hypothetical protein NMB0545 [Neisseria meningitidis MC58] gi|7225771|gb|AAF40974.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325139802|gb|EGC62335.1| chromosome segregation protein SMC [Neisseria meningitidis CU385] Length = 1161 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|327389482|gb|EGE87827.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA04375] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|331266251|ref|YP_004325881.1| chromosome condensation and segregation SMC protein [Streptococcus oralis Uo5] gi|326682923|emb|CBZ00540.1| chromosome condensation and segregation SMC protein [Streptococcus oralis Uo5] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|307706717|ref|ZP_07643522.1| chromosome segregation protein SMC [Streptococcus mitis SK321] gi|307617802|gb|EFN96964.1| chromosome segregation protein SMC [Streptococcus mitis SK321] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|262282632|ref|ZP_06060400.1| chromosome segregation protein SMC [Streptococcus sp. 2_1_36FAA] gi|262261923|gb|EEY80621.1| chromosome segregation protein SMC [Streptococcus sp. 2_1_36FAA] Length = 1177 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|225856913|ref|YP_002738424.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] gi|225724779|gb|ACO20631.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|168493168|ref|ZP_02717311.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] gi|183576749|gb|EDT97277.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|168486567|ref|ZP_02711075.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1087-00] gi|183570412|gb|EDT90940.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1087-00] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|15901108|ref|NP_345712.1| hypothetical protein SP_1247 [Streptococcus pneumoniae TIGR4] gi|111658430|ref|ZP_01409109.1| hypothetical protein SpneT_02000401 [Streptococcus pneumoniae TIGR4] gi|14972729|gb|AAK75352.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|332074857|gb|EGI85329.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA41301] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|322376802|ref|ZP_08051295.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. M334] gi|321282609|gb|EFX59616.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. M334] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|307709492|ref|ZP_07645949.1| chromosome segregation protein SMC [Streptococcus mitis SK564] gi|307619806|gb|EFN98925.1| chromosome segregation protein SMC [Streptococcus mitis SK564] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|306825116|ref|ZP_07458458.1| cell division protein Smc [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432552|gb|EFM35526.1| cell division protein Smc [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|301800167|emb|CBW32772.1| putative chromosome partition protein [Streptococcus pneumoniae OXC141] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|289168051|ref|YP_003446320.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] gi|288907618|emb|CBJ22455.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|225860920|ref|YP_002742429.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298229965|ref|ZP_06963646.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254344|ref|ZP_06977930.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502756|ref|YP_003724696.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] gi|225727720|gb|ACO23571.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298238351|gb|ADI69482.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|225854712|ref|YP_002736224.1| chromosome segregation protein SMC [Streptococcus pneumoniae JJA] gi|225722373|gb|ACO18226.1| chromosome segregation protein SMC [Streptococcus pneumoniae JJA] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|225859041|ref|YP_002740551.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] gi|225721362|gb|ACO17216.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|168485010|ref|ZP_02709948.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1873-00] gi|172041873|gb|EDT49919.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1873-00] gi|332201710|gb|EGJ15780.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA47368] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|148985142|ref|ZP_01818381.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] gi|147922587|gb|EDK73705.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] Length = 1179 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|254854266|ref|ZP_05243614.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258607658|gb|EEW20266.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 279 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 22/27 (81%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 24 EQVTQISGKNGFGKTSIGEAVTWLLYG 50 >gi|239995020|ref|ZP_04715544.1| Chromosome segregation ATPase, sms [Alteromonas macleodii ATCC 27126] Length = 1175 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E I F +T + G NG GKS++ +A+ W+ + + GD++ Sbjct: 2 RLKKIKLAGFKSFVEPTTIPFLGEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAM 61 >gi|169824543|ref|YP_001692154.1| chromosome segregation SMC protein [Finegoldia magna ATCC 29328] gi|167831348|dbj|BAG08264.1| chromosome segregation SMC protein [Finegoldia magna ATCC 29328] Length = 1167 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ ++ Sbjct: 3 LKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNKMQ 62 >gi|293392448|ref|ZP_06636770.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291425102|gb|EFE98309.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 871 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ FRGF + + + + +T++ G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMQQEIFDLSYDITLIYGANGTGKSSFCEALEVAMLG 130 >gi|293365562|ref|ZP_06612271.1| cell division protein Smc [Streptococcus oralis ATCC 35037] gi|307703517|ref|ZP_07640459.1| chromosome segregation protein SMC [Streptococcus oralis ATCC 35037] gi|291315930|gb|EFE56374.1| cell division protein Smc [Streptococcus oralis ATCC 35037] gi|307622924|gb|EFO01919.1| chromosome segregation protein SMC [Streptococcus oralis ATCC 35037] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|182684026|ref|YP_001835773.1| hypothetical protein SPCG_1056 [Streptococcus pneumoniae CGSP14] gi|303254258|ref|ZP_07340367.1| hypothetical protein CGSSpBS455_02192 [Streptococcus pneumoniae BS455] gi|303258882|ref|ZP_07344861.1| hypothetical protein CGSSp9vBS293_10438 [Streptococcus pneumoniae SP-BS293] gi|303261565|ref|ZP_07347512.1| hypothetical protein CGSSp14BS292_04130 [Streptococcus pneumoniae SP14-BS292] gi|303264236|ref|ZP_07350156.1| hypothetical protein CGSSpBS397_09985 [Streptococcus pneumoniae BS397] gi|303266133|ref|ZP_07352026.1| hypothetical protein CGSSpBS457_05117 [Streptococcus pneumoniae BS457] gi|303268140|ref|ZP_07353940.1| hypothetical protein CGSSpBS458_01192 [Streptococcus pneumoniae BS458] gi|182629360|gb|ACB90308.1| hypothetical protein SPCG_1056 [Streptococcus pneumoniae CGSP14] gi|301801898|emb|CBW34622.1| putative chromosome partition protein [Streptococcus pneumoniae INV200] gi|302598752|gb|EFL65789.1| hypothetical protein CGSSpBS455_02192 [Streptococcus pneumoniae BS455] gi|302637145|gb|EFL67633.1| hypothetical protein CGSSp14BS292_04130 [Streptococcus pneumoniae SP14-BS292] gi|302639825|gb|EFL70281.1| hypothetical protein CGSSpBS293_10438 [Streptococcus pneumoniae SP-BS293] gi|302642357|gb|EFL72704.1| hypothetical protein CGSSpBS458_01192 [Streptococcus pneumoniae BS458] gi|302644303|gb|EFL74557.1| hypothetical protein CGSSpBS457_05117 [Streptococcus pneumoniae BS457] gi|302646048|gb|EFL76275.1| hypothetical protein CGSSpBS397_09985 [Streptococcus pneumoniae BS397] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|149002615|ref|ZP_01827547.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP14-BS69] gi|237649947|ref|ZP_04524199.1| hypothetical protein SpneC1_04341 [Streptococcus pneumoniae CCRI 1974] gi|237822504|ref|ZP_04598349.1| hypothetical protein SpneC19_09414 [Streptococcus pneumoniae CCRI 1974M2] gi|147759226|gb|EDK66219.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP14-BS69] gi|332200694|gb|EGJ14766.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA41317] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|322387563|ref|ZP_08061172.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus infantis ATCC 700779] gi|321141430|gb|EFX36926.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus infantis ATCC 700779] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|164688566|ref|ZP_02212594.1| hypothetical protein CLOBAR_02211 [Clostridium bartlettii DSM 16795] gi|164602979|gb|EDQ96444.1| hypothetical protein CLOBAR_02211 [Clostridium bartlettii DSM 16795] Length = 1110 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I L +E+ F+ F +I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 6 IVHLKRLELKGFKSFPTKTEINFNEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGD 65 Query: 86 SIKKRSI-----KTPMPMC 99 ++ K PM C Sbjct: 66 KLEDVIFAGTIDKKPMNYC 84 >gi|116490532|ref|YP_810076.1| condensin subunit Smc [Oenococcus oeni PSU-1] gi|116091257|gb|ABJ56411.1| condensin subunit Smc [Oenococcus oeni PSU-1] Length = 1184 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G+++ Sbjct: 2 KLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNTM 61 >gi|322375350|ref|ZP_08049863.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] gi|321279613|gb|EFX56653.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|315613275|ref|ZP_07888184.1| cell division protein Smc [Streptococcus sanguinis ATCC 49296] gi|315314510|gb|EFU62553.1| cell division protein Smc [Streptococcus sanguinis ATCC 49296] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|306829618|ref|ZP_07462808.1| cell division protein Smc [Streptococcus mitis ATCC 6249] gi|304428704|gb|EFM31794.1| cell division protein Smc [Streptococcus mitis ATCC 6249] Length = 1179 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|84385714|ref|ZP_00988745.1| hypothetical protein V12B01_26309 [Vibrio splendidus 12B01] gi|84379694|gb|EAP96546.1| hypothetical protein V12B01_26309 [Vibrio splendidus 12B01] Length = 842 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 S Y K I K+ I++++FRG+T+ I + LT++ G+NG GK+S+ EAI Sbjct: 413 SLYVEKTI-KVNQIKLTNFRGYTDF-TIPIHESLTVLVGENGAGKTSILEAI 462 >gi|290889933|ref|ZP_06553020.1| hypothetical protein AWRIB429_0410 [Oenococcus oeni AWRIB429] gi|290480543|gb|EFD89180.1| hypothetical protein AWRIB429_0410 [Oenococcus oeni AWRIB429] Length = 1184 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G+++ Sbjct: 2 KLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNTM 61 >gi|237808349|ref|YP_002892789.1| SMC domain-containing protein [Tolumonas auensis DSM 9187] gi|237500610|gb|ACQ93203.1| SMC domain protein [Tolumonas auensis DSM 9187] Length = 680 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL++I + ++R F ++F+ ++T+++G+NG GK+S+ A +W FYG Sbjct: 1 MKLINISLINYRQFFGENTLKFSVDPKQNITVIHGENGAGKTSILNAFKWCFYG 54 >gi|118587505|ref|ZP_01544929.1| chromosome segregation SMC protein [Oenococcus oeni ATCC BAA-1163] gi|118431956|gb|EAV38698.1| chromosome segregation SMC protein [Oenococcus oeni ATCC BAA-1163] Length = 1184 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G+++ Sbjct: 2 KLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNTM 61 >gi|313892797|ref|ZP_07826378.1| chromosome segregation protein SMC [Veillonella sp. oral taxon 158 str. F0412] gi|313442728|gb|EFR61139.1| chromosome segregation protein SMC [Veillonella sp. oral taxon 158 str. F0412] Length = 1184 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|309805927|ref|ZP_07699959.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 03V1-b] gi|308167703|gb|EFO69850.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 03V1-b] Length = 246 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|303242100|ref|ZP_07328591.1| chromosome segregation protein SMC [Acetivibrio cellulolyticus CD2] gi|302590394|gb|EFL60151.1| chromosome segregation protein SMC [Acetivibrio cellulolyticus CD2] Length = 1190 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F + +EF +T V G NG GKS++S+AI W+ Sbjct: 6 LEIQGFKSFADKINLEFNSGITAVVGPNGSGKSNISDAIRWVL 48 >gi|157363277|ref|YP_001470044.1| SMC domain-containing protein [Thermotoga lettingae TMO] gi|157313881|gb|ABV32980.1| SMC domain protein [Thermotoga lettingae TMO] Length = 854 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L IEI +F G + + F D + ++ GQNG GKSSL EAI + YG Sbjct: 7 LTIEIENFLGIKKCN-LSFKDGVFLIIGQNGAGKSSLLEAIVFALYG 52 >gi|297588525|ref|ZP_06947168.1| chromosome segregation protein Smc [Finegoldia magna ATCC 53516] gi|297573898|gb|EFH92619.1| chromosome segregation protein Smc [Finegoldia magna ATCC 53516] Length = 1167 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ ++ Sbjct: 3 LKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNKMQ 62 >gi|239826793|ref|YP_002949417.1| ATP-dependent OLD family endonuclease [Geobacillus sp. WCH70] gi|239807086|gb|ACS24151.1| ATP-dependent OLD family endonuclease [Geobacillus sp. WCH70] Length = 634 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL + + +FRG+ E + I F++++ ++ G+N GKS+L EA+E F G Sbjct: 2 KLHSLYLKNFRGYRE-EVINFSENMNVIIGKNDIGKSTLMEALEIFFNG 49 >gi|322389959|ref|ZP_08063499.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 903] gi|321143395|gb|EFX38833.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 903] Length = 1178 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|312868408|ref|ZP_07728608.1| chromosome segregation protein SMC [Streptococcus parasanguinis F0405] gi|311096153|gb|EFQ54397.1| chromosome segregation protein SMC [Streptococcus parasanguinis F0405] Length = 1178 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|296876110|ref|ZP_06900164.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 15912] gi|296432821|gb|EFH18614.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 15912] Length = 1178 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|283769400|ref|ZP_06342299.1| chromosome segregation protein SMC [Bulleidia extructa W1219] gi|283104057|gb|EFC05441.1| chromosome segregation protein SMC [Bulleidia extructa W1219] Length = 977 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ F+ F + IEF +T + G NG GKS++++AI W+ + + GD + Sbjct: 6 VEMQGFKSFADKTVIEFNHPITGIVGPNGCGKSNITDAIRWVLGEQSAKSMRGDKM 61 >gi|322391778|ref|ZP_08065243.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus peroris ATCC 700780] gi|321145258|gb|EFX40654.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus peroris ATCC 700780] Length = 1178 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|304373284|ref|YP_003856493.1| Protein P115 [Mycoplasma hyorhinis HUB-1] gi|304309475|gb|ADM21955.1| Protein P115 [Mycoplasma hyorhinis HUB-1] Length = 979 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 30/49 (61%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + KL+ IEI F+ F + I F + + G NG GKS++++AI+W+ Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIKWVL 49 >gi|149012299|ref|ZP_01833368.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP19-BS75] gi|147763625|gb|EDK70560.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP19-BS75] Length = 1081 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|238019506|ref|ZP_04599932.1| hypothetical protein VEIDISOL_01375 [Veillonella dispar ATCC 17748] gi|237864205|gb|EEP65495.1| hypothetical protein VEIDISOL_01375 [Veillonella dispar ATCC 17748] Length = 1184 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|315221418|ref|ZP_07863339.1| segregation protein SMC [Streptococcus anginosus F0211] gi|315189537|gb|EFU23231.1| segregation protein SMC [Streptococcus anginosus F0211] Length = 1177 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVIFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|284799617|ref|ZP_06390248.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] gi|284797531|gb|EFC52878.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] Length = 635 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|328948170|ref|YP_004365507.1| chromosome segregation protein SMC [Treponema succinifaciens DSM 2489] gi|328448494|gb|AEB14210.1| chromosome segregation protein SMC [Treponema succinifaciens DSM 2489] Length = 984 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + I FAD +T + G NG GKS++ +AI+W+ Sbjct: 3 LKSLEIFGFKSFADRTHINFADGITALLGPNGCGKSNVVDAIKWVL 48 >gi|319939365|ref|ZP_08013725.1| chromosome segregation protein SMC [Streptococcus anginosus 1_2_62CV] gi|319811351|gb|EFW07646.1| chromosome segregation protein SMC [Streptococcus anginosus 1_2_62CV] Length = 1177 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTKVIFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|315185663|gb|EFU19431.1| chromosome segregation protein SMC [Spirochaeta thermophila DSM 6578] Length = 927 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E +IEF + +T + G NG GKS++ +AI+W+ Sbjct: 6 VELFGFKSFGEKTRIEFREGVTAIVGPNGCGKSNIVDAIKWVL 48 >gi|229829000|ref|ZP_04455069.1| hypothetical protein GCWU000342_01085 [Shuttleworthia satelles DSM 14600] gi|229792163|gb|EEP28277.1| hypothetical protein GCWU000342_01085 [Shuttleworthia satelles DSM 14600] Length = 1186 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F ++F +T + G NG GKS++S+A+ W+ + R+ G S++ Sbjct: 3 LKSIEIHGFKSFANKIVLDFHKGITAIVGPNGSGKSNVSDAVRWVLGEQSARQLRGASMQ 62 >gi|298384285|ref|ZP_06993845.1| hypothetical protein HMPREF9007_00882 [Bacteroides sp. 1_1_14] gi|298262564|gb|EFI05428.1| hypothetical protein HMPREF9007_00882 [Bacteroides sp. 1_1_14] Length = 723 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I++FR + EF+ LT++ G NG GK++ EA+EWL Sbjct: 6 VTINNFRSYYGENTFEFSKGLTLIIGGNGDGKTTFFEALEWLL 48 >gi|323464671|gb|ADX76824.1| chromosome segregation SMC protein [Staphylococcus pseudintermedius ED99] Length = 1190 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+ F+ F E +I+F +T + G NG GKS++++AI+W+ + R G ++ Sbjct: 4 LKSIDAYGFKSFAEATQIQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSARSLRGSKME 63 >gi|319892232|ref|YP_004149107.1| Chromosome partition protein smc [Staphylococcus pseudintermedius HKU10-03] gi|317161928|gb|ADV05471.1| Chromosome partition protein smc [Staphylococcus pseudintermedius HKU10-03] Length = 1190 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+ F+ F E +I+F +T + G NG GKS++++AI+W+ + R G ++ Sbjct: 4 LKSIDAYGFKSFAEATQIQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSARSLRGSKME 63 >gi|307718735|ref|YP_003874267.1| chromosome partition protein SmC [Spirochaeta thermophila DSM 6192] gi|306532460|gb|ADN01994.1| putative chromosome partition protein SmC [Spirochaeta thermophila DSM 6192] Length = 927 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E +IEF + +T + G NG GKS++ +AI+W+ Sbjct: 6 VELFGFKSFGEKTRIEFREGVTAIVGPNGCGKSNIVDAIKWVL 48 >gi|116873239|ref|YP_850020.1| chromosome segregation SMC protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742117|emb|CAK21241.1| chromosome segregation SMC protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1186 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|160872306|ref|ZP_02062438.1| chromosome segregation protein SMC [Rickettsiella grylli] gi|159121105|gb|EDP46443.1| chromosome segregation protein SMC [Rickettsiella grylli] Length = 1176 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +LT V G NG GKS++ +AI W+ + ++ G+S Sbjct: 1 MRLESIQLAGFKSFVDPTIVSFPTNLTAVVGPNGCGKSNIIDAIRWVMGESSAKQLRGES 60 Query: 87 I 87 + Sbjct: 61 L 61 >gi|304440613|ref|ZP_07400497.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370800|gb|EFM24422.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] Length = 761 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K IE+ F F + ++F D + G+N GKS++ AI LFYG+++ DSI Sbjct: 2 KFKKIELKSFGKFNN-KTLDFEDGFNFIYGENEAGKSTMESAIYGLFYGFSK-----DSI 55 Query: 88 KKR 90 K+R Sbjct: 56 KRR 58 >gi|300814476|ref|ZP_07094737.1| chromosome segregation protein SMC [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511394|gb|EFK38633.1| chromosome segregation protein SMC [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 1178 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I F+ F + KIEF +T + G NG GKS++++AI W+ Sbjct: 8 IEGFKSFAKKTKIEFNKDITAIVGPNGSGKSNITDAIMWVL 48 >gi|220907659|ref|YP_002482970.1| recombination protein F [Cyanothece sp. PCC 7425] gi|254790473|sp|B8HVF7|RECF_CYAP4 RecName: Full=DNA replication and repair protein recF gi|219864270|gb|ACL44609.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7425] Length = 377 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +++ +FR + E Q I+FA TI+ GQN GKS+L EA+E L R H D Sbjct: 3 LKSLQLRYFRNYRE-QVIDFAAPKTILVGQNAQGKSNLLEAVE-LLSTLRSHRSHRD 57 >gi|157961512|ref|YP_001501546.1| chromosome segregation protein SMC [Shewanella pealeana ATCC 700345] gi|157846512|gb|ABV87011.1| chromosome segregation protein SMC [Shewanella pealeana ATCC 700345] Length = 1140 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI + L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPLLNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|325266560|ref|ZP_08133237.1| SMC structural maintenance of chromosomes partitioning protein [Kingella denitrificans ATCC 33394] gi|324982003|gb|EGC17638.1| SMC structural maintenance of chromosomes partitioning protein [Kingella denitrificans ATCC 33394] Length = 1166 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTQIKLTGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|315303705|ref|ZP_07874219.1| chromosome segregation protein SMC [Listeria ivanovii FSL F6-596] gi|313627918|gb|EFR96537.1| chromosome segregation protein SMC [Listeria ivanovii FSL F6-596] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|289435147|ref|YP_003465019.1| chromosome segregation protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171391|emb|CBH27935.1| chromosome segregation protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|282882384|ref|ZP_06291012.1| chromosome segregation protein SMC [Peptoniphilus lacrimalis 315-B] gi|281297805|gb|EFA90273.1| chromosome segregation protein SMC [Peptoniphilus lacrimalis 315-B] Length = 1178 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I F+ F + KIEF +T + G NG GKS++++AI W+ Sbjct: 8 IEGFKSFAKKTKIEFNKDITAIVGPNGSGKSNITDAIMWVL 48 >gi|188992088|ref|YP_001904098.1| Chromosome segregation protein [Xanthomonas campestris pv. campestris str. B100] gi|167733848|emb|CAP52054.1| Chromosome segregation protein [Xanthomonas campestris pv. campestris] Length = 1167 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|21231021|ref|NP_636938.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768974|ref|YP_243736.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. 8004] gi|21112645|gb|AAM40862.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574306|gb|AAY49716.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. 8004] Length = 1167 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|171780117|ref|ZP_02921021.1| hypothetical protein STRINF_01905 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281465|gb|EDT46900.1| hypothetical protein STRINF_01905 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 1179 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IE+ F+ F + IEF +T + G NG GKS+++E++ W Sbjct: 3 LKEIEMQGFKSFADKTTIEFDKGVTAIVGPNGSGKSNITESLRW 46 >gi|319789067|ref|YP_004150700.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] gi|317113569|gb|ADU96059.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] Length = 1171 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 35/57 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F + +I F++ + + G NG GKS++ +A++W+ G + + DSIK Sbjct: 5 LKLKGFKSFADETEIRFSEGINCIVGPNGCGKSNIVDALKWVVGGTSPKGMRADSIK 61 >gi|309804875|ref|ZP_07698937.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 09V1-c] gi|308165814|gb|EFO68035.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 09V1-c] Length = 241 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|282849042|ref|ZP_06258431.1| chromosome segregation protein SMC [Veillonella parvula ATCC 17745] gi|282581317|gb|EFB86711.1| chromosome segregation protein SMC [Veillonella parvula ATCC 17745] Length = 1184 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|269797768|ref|YP_003311668.1| chromosome segregation protein SMC [Veillonella parvula DSM 2008] gi|269094397|gb|ACZ24388.1| chromosome segregation protein SMC [Veillonella parvula DSM 2008] Length = 1184 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|226224407|ref|YP_002758514.1| Smc protein [Listeria monocytogenes Clip81459] gi|225876869|emb|CAS05578.1| Putative Smc protein [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|225387009|ref|ZP_03756773.1| hypothetical protein CLOSTASPAR_00759 [Clostridium asparagiforme DSM 15981] gi|225047021|gb|EEG57267.1| hypothetical protein CLOSTASPAR_00759 [Clostridium asparagiforme DSM 15981] Length = 617 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KLL++ IS F F + Q + F D L +V G+N GKS+L I + +G ++R Sbjct: 2 KLLNLHISGFGKFQD-QDVSFEDRLNVVYGKNEAGKSTLHTFIRGMLFGIEKQR 54 >gi|217964044|ref|YP_002349722.1| chromosome segregation protein SMC [Listeria monocytogenes HCC23] gi|290893066|ref|ZP_06556055.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J2-071] gi|217333314|gb|ACK39108.1| chromosome segregation protein SMC [Listeria monocytogenes HCC23] gi|290557426|gb|EFD90951.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J2-071] gi|307571386|emb|CAR84565.1| chromosome condensation and segregation protein [Listeria monocytogenes L99] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|46908035|ref|YP_014424.1| chromosome segregation SMC protein [Listeria monocytogenes serotype 4b str. F2365] gi|47093843|ref|ZP_00231587.1| chromosome segregation SMC protein [Listeria monocytogenes str. 4b H7858] gi|254933276|ref|ZP_05266635.1| chromosome segregation SMC protein [Listeria monocytogenes HPB2262] gi|46881305|gb|AAT04601.1| chromosome segregation SMC protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017784|gb|EAL08573.1| chromosome segregation SMC protein [Listeria monocytogenes str. 4b H7858] gi|293584836|gb|EFF96868.1| chromosome segregation SMC protein [Listeria monocytogenes HPB2262] gi|332312245|gb|EGJ25340.1| Cell division protein Smc [Listeria monocytogenes str. Scott A] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|320662227|gb|EFX29624.1| hypothetical protein ECO5905_04197 [Escherichia coli O55:H7 str. USDA 5905] Length = 773 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +KL + I++F+ F K+EF + L + G NGYGK+S+ +A+E LF G +R Sbjct: 4 WKLSKLRINNFKAF---DKVEFDFESSSLLTLEGPNGYGKTSVYDALELLFTGKIKR 57 >gi|313623279|gb|EFR93522.1| chromosome segregation protein SMC [Listeria innocua FSL J1-023] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|313618315|gb|EFR90362.1| chromosome segregation protein SMC [Listeria innocua FSL S4-378] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|254826154|ref|ZP_05231155.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-194] gi|255521157|ref|ZP_05388394.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-175] gi|293595394|gb|EFG03155.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-194] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|157151450|ref|YP_001450083.1| chromosome segregation protein SMC [Streptococcus gordonii str. Challis substr. CH1] gi|157076244|gb|ABV10927.1| chromosome segregation protein SMC [Streptococcus gordonii str. Challis substr. CH1] Length = 1177 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + K+ F +T V G NG GKS+++E + W Sbjct: 3 LKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITEGLRW 46 >gi|254852712|ref|ZP_05242060.1| chromosome segregation SMC protein [Listeria monocytogenes FSL R2-503] gi|300763883|ref|ZP_07073880.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N1-017] gi|258606033|gb|EEW18641.1| chromosome segregation SMC protein [Listeria monocytogenes FSL R2-503] gi|300515619|gb|EFK42669.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N1-017] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|16800984|ref|NP_471252.1| hypothetical protein lin1918 [Listeria innocua Clip11262] gi|16414419|emb|CAC97148.1| smc [Listeria innocua Clip11262] Length = 1186 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|294791674|ref|ZP_06756822.1| putative cell division protein Smc [Veillonella sp. 6_1_27] gi|294456904|gb|EFG25266.1| putative cell division protein Smc [Veillonella sp. 6_1_27] Length = 1184 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|220927524|ref|YP_002504433.1| SMC domain protein [Clostridium cellulolyticum H10] gi|219997852|gb|ACL74453.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 985 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++KL IE+ +FR F + IEF + + + G NG GK++L +A EWL G Sbjct: 1 MYKLSKIELDNFRVFKGHKTIEFLNRTGSPYNFICIYGSNGSGKTALVDAFEWLATGKLH 60 Query: 80 R 80 R Sbjct: 61 R 61 >gi|294793532|ref|ZP_06758669.1| putative cell division protein Smc [Veillonella sp. 3_1_44] gi|294455102|gb|EFG23474.1| putative cell division protein Smc [Veillonella sp. 3_1_44] Length = 1184 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ Sbjct: 2 QLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVL 48 >gi|194333293|ref|YP_002015153.1| SMC domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311111|gb|ACF45506.1| SMC domain protein [Prosthecochloris aestuarii DSM 271] Length = 877 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 29/51 (56%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I +L + + FRGFT + + + +T+V G NG GKSS EA+E G Sbjct: 80 IGRLHQLIVGPFRGFTNQEIFDLSKPITLVYGANGTGKSSFCEALETALLG 130 >gi|325971129|ref|YP_004247320.1| SMC domain protein [Spirochaeta sp. Buddy] gi|324026367|gb|ADY13126.1| SMC domain protein [Spirochaeta sp. Buddy] Length = 949 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +EF+D +T + G NG GKS++ +AI+W+ Sbjct: 3 LKSLEIYGFKSFADKVNLEFSDGITSLLGPNGCGKSNIVDAIKWVL 48 >gi|284802250|ref|YP_003414115.1| hypothetical protein LM5578_2006 [Listeria monocytogenes 08-5578] gi|284995392|ref|YP_003417160.1| hypothetical protein LM5923_1957 [Listeria monocytogenes 08-5923] gi|284057812|gb|ADB68753.1| hypothetical protein LM5578_2006 [Listeria monocytogenes 08-5578] gi|284060859|gb|ADB71798.1| hypothetical protein LM5923_1957 [Listeria monocytogenes 08-5923] Length = 1186 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|224500034|ref|ZP_03668383.1| hypothetical protein LmonF1_10304 [Listeria monocytogenes Finland 1988] Length = 1186 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|47097387|ref|ZP_00234938.1| chromosome segregation SMC protein [Listeria monocytogenes str. 1/2a F6854] gi|254831595|ref|ZP_05236250.1| hypothetical protein Lmon1_09588 [Listeria monocytogenes 10403S] gi|254899499|ref|ZP_05259423.1| hypothetical protein LmonJ_06784 [Listeria monocytogenes J0161] gi|254912362|ref|ZP_05262374.1| chromosome segregation SMC protein [Listeria monocytogenes J2818] gi|254936689|ref|ZP_05268386.1| chromosome segregation SMC protein [Listeria monocytogenes F6900] gi|47014235|gb|EAL05217.1| chromosome segregation SMC protein [Listeria monocytogenes str. 1/2a F6854] gi|258609285|gb|EEW21893.1| chromosome segregation SMC protein [Listeria monocytogenes F6900] gi|293590343|gb|EFF98677.1| chromosome segregation SMC protein [Listeria monocytogenes J2818] Length = 1186 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|326803886|ref|YP_004321704.1| chromosome segregation protein SMC [Aerococcus urinae ACS-120-V-Col10a] gi|326650714|gb|AEA00897.1| chromosome segregation protein SMC [Aerococcus urinae ACS-120-V-Col10a] Length = 1186 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F E ++E T + G NG GKS+++EA++W+ Sbjct: 3 LKTIEMVGFKSFAEKTRVELDQGFTAIVGPNGSGKSNITEAVKWVL 48 >gi|239931597|ref|ZP_04688550.1| hypothetical protein SghaA1_25482 [Streptomyces ghanaensis ATCC 14672] gi|291439969|ref|ZP_06579359.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342864|gb|EFE69820.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 807 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 29 LLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +S FRG ++ LT+V G+NG GKSS +EA+E G R + Sbjct: 66 LQSVTVSGFRGIGRTARLPLTPGPGLTLVTGRNGSGKSSFAEAVEIALTGDNARWRGRSD 125 Query: 87 IKKRS 91 I +RS Sbjct: 126 IWRRS 130 >gi|212634785|ref|YP_002311310.1| SMC family protein [Shewanella piezotolerans WP3] gi|212556269|gb|ACJ28723.1| SMC family protein [Shewanella piezotolerans WP3] Length = 1141 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI + L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPLPNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|16803844|ref|NP_465329.1| hypothetical protein lmo1804 [Listeria monocytogenes EGD-e] gi|224501395|ref|ZP_03669702.1| hypothetical protein LmonFR_02550 [Listeria monocytogenes FSL R2-561] gi|16411258|emb|CAC99882.1| smc [Listeria monocytogenes EGD-e] Length = 1186 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|87310422|ref|ZP_01092552.1| chromosome partition protein Smc [Blastopirellula marina DSM 3645] gi|87286921|gb|EAQ78825.1| chromosome partition protein Smc [Blastopirellula marina DSM 3645] Length = 1209 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +E+ F+ F + + EF +T+V G NG GKS++ +AI+W Sbjct: 5 LELVGFKSFADKTRFEFPPGITVVVGPNGSGKSNIVDAIKW 45 >gi|330836477|ref|YP_004411118.1| SMC domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748380|gb|AEC01736.1| SMC domain protein [Spirochaeta coccoides DSM 17374] Length = 948 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + K++FAD +T + G NG GKS++ ++I+W+ Sbjct: 3 LKTLEMIGFKSFADKTKLDFADGITCLLGPNGCGKSNIVDSIKWVL 48 >gi|285018507|ref|YP_003376218.1| chromosome segregation protein smc [Xanthomonas albilineans GPE PC73] gi|283473725|emb|CBA16228.1| putative chromosome segregation protein smc [Xanthomonas albilineans] Length = 1167 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|312134983|ref|YP_004002321.1| SMC domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775034|gb|ADQ04521.1| SMC domain protein [Caldicellulosiruptor owensensis OL] Length = 857 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 VENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|291283973|ref|YP_003500791.1| hypothetical protein G2583_3286 [Escherichia coli O55:H7 str. CB9615] gi|290763846|gb|ADD57807.1| Hypothetical purine NTPase [Escherichia coli O55:H7 str. CB9615] Length = 773 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +KL + I++F+ F K+EF + L + G NGYGK+S+ +A+E LF G +R Sbjct: 4 WKLSKLRINNFKAF---DKVEFDFESSSLLTLEGPNGYGKTSVYDALELLFTGKIKR 57 >gi|325915471|ref|ZP_08177785.1| condensin subunit Smc [Xanthomonas vesicatoria ATCC 35937] gi|325538353|gb|EGD10035.1| condensin subunit Smc [Xanthomonas vesicatoria ATCC 35937] Length = 1167 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|227530553|ref|ZP_03960602.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] gi|227349559|gb|EEJ39850.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] Length = 1187 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + + F+ F + I+F +T + G NG GKS++ EAI W+ + + GD + Sbjct: 2 QLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAHQLRGDKM 61 >gi|163748618|ref|ZP_02155871.1| hypothetical protein KT99_18482 [Shewanella benthica KT99] gi|161331728|gb|EDQ02532.1| hypothetical protein KT99_18482 [Shewanella benthica KT99] Length = 534 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 6/66 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI----EWLFYGYTQRR 81 +L I++ +FR F+EI I+ D+ LT++ G NG GKS++ +AI WL T++ Sbjct: 62 LELTHIKLQNFRAFSEID-IKIPDNRLTVIIGNNGGGKSTILDAISHNMSWLVNRMTKKG 120 Query: 82 KHGDSI 87 G+SI Sbjct: 121 GTGESI 126 >gi|325922525|ref|ZP_08184286.1| condensin subunit Smc [Xanthomonas gardneri ATCC 19865] gi|325546990|gb|EGD18083.1| condensin subunit Smc [Xanthomonas gardneri ATCC 19865] Length = 1167 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|21242373|ref|NP_641955.1| chromosome segregation protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107810|gb|AAM36491.1| chromosome segregation protein [Xanthomonas axonopodis pv. citri str. 306] Length = 1211 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 46 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 105 >gi|309807875|ref|ZP_07701807.1| putative recombination protein F [Lactobacillus iners LactinV 01V1-a] gi|308168977|gb|EFO71063.1| putative recombination protein F [Lactobacillus iners LactinV 01V1-a] Length = 347 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|227544366|ref|ZP_03974415.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri CF48-3A] gi|300909773|ref|ZP_07127234.1| cell division protein Smc [Lactobacillus reuteri SD2112] gi|227185629|gb|EEI65700.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri CF48-3A] gi|300893638|gb|EFK86997.1| cell division protein Smc [Lactobacillus reuteri SD2112] Length = 1187 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD + Sbjct: 2 QLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDRM 61 >gi|163751931|ref|ZP_02159144.1| SMC family protein [Shewanella benthica KT99] gi|161328214|gb|EDP99379.1| SMC family protein [Shewanella benthica KT99] Length = 1136 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I F L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDSTTIPFLSPLSAIIGPNGCGKSNIIDAVRWVLGESSAKHLRGDSM 61 >gi|84623948|ref|YP_451320.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367888|dbj|BAE69046.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 1167 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|289663139|ref|ZP_06484720.1| chromosome segregation protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|188576351|ref|YP_001913280.1| chromosome segregation protein SMC [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520803|gb|ACD58748.1| chromosome segregation protein SMC [Xanthomonas oryzae pv. oryzae PXO99A] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|166711575|ref|ZP_02242782.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|325912222|ref|ZP_08174619.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 143-D] gi|325475881|gb|EGC79050.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 143-D] Length = 276 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|294665958|ref|ZP_06731222.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604261|gb|EFF47648.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|294155353|ref|YP_003559737.1| chromosomal segregation and condensation complex, SMC protein [Mycoplasma crocodyli MP145] gi|291600153|gb|ADE19649.1| chromosomal segregation and condensation complex, SMC protein [Mycoplasma crocodyli MP145] Length = 982 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ IE F+ F + + F +T + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKIEAHGFKSFADPVVLHFDGGVTGIVGPNGSGKSNINDAIKWVLGEQSSKELRGDNM 61 >gi|289669575|ref|ZP_06490650.1| chromosome segregation protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|228909107|ref|ZP_04072936.1| hypothetical protein bthur0013_32620 [Bacillus thuringiensis IBL 200] gi|228850615|gb|EEM95440.1| hypothetical protein bthur0013_32620 [Bacillus thuringiensis IBL 200] Length = 966 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ IE+ FRGF + ++ +E D + ++ G NG+GKSS+ +AIEW G Sbjct: 1 MKITSIELQAFRGFNKKEEFCLENVD-VIVLYGPNGHGKSSIYDAIEWGLTG 51 >gi|222529160|ref|YP_002573042.1| chromosome segregation protein SMC [Caldicellulosiruptor bescii DSM 6725] gi|222456007|gb|ACM60269.1| chromosome segregation protein SMC [Caldicellulosiruptor bescii DSM 6725] Length = 1177 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFEKGITAIVGPNGCGKSNITDAIRW 46 >gi|194466492|ref|ZP_03072479.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23] gi|194453528|gb|EDX42425.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23] Length = 1187 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD + Sbjct: 2 QLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDRM 61 >gi|330723843|gb|AEC46213.1| Protein P115 [Mycoplasma hyorhinis MCLD] Length = 979 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + KL+ IEI F+ F + I F + + G NG GKS++++AI W+ Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIRWVL 49 >gi|229029528|ref|ZP_04185609.1| hypothetical protein bcere0028_16180 [Bacillus cereus AH1271] gi|228731810|gb|EEL82711.1| hypothetical protein bcere0028_16180 [Bacillus cereus AH1271] Length = 1040 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 32 IEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 IE+ FR + E Q +F + +L ++ NG+GK+SL +AIEW R + + Sbjct: 8 IELGAFRAYEENQTFDFINSKGQIANLVVIFAPNGFGKTSLLDAIEWGLTKEIHRFANNE 67 Query: 86 SIKK 89 +KK Sbjct: 68 VLKK 71 >gi|91202833|emb|CAJ72472.1| similar to structural maintenance of chromosome (smc) seggregation ATPase protein [Candidatus Kuenenia stuttgartiensis] Length = 1207 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL +E+ F+ F E ++ F D + ++ G NG GKS++ +A++W+ Sbjct: 2 KLKKLELFGFKSFAEKTEVVFEDGINVIVGPNGCGKSNIVDAVKWVL 48 >gi|1352653|sp|P41508|P115_MYCHR RecName: Full=Protein P115 gi|150165|gb|AAA25423.1| 115 kDa protein [Mycoplasma hyorhinis] Length = 979 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + KL+ IEI F+ F + I F + + G NG GKS++++AI W+ Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIRWVL 49 >gi|47097498|ref|ZP_00235040.1| ATPase involved in DNA repair, putative [Listeria monocytogenes str. 1/2a F6854] gi|254854551|ref|ZP_05243899.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254900909|ref|ZP_05260833.1| hypothetical protein LmonJ_13881 [Listeria monocytogenes J0161] gi|254913877|ref|ZP_05263889.1| ATPase [Listeria monocytogenes J2818] gi|254938266|ref|ZP_05269963.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47014139|gb|EAL05130.1| ATPase involved in DNA repair, putative [Listeria monocytogenes str. 1/2a F6854] gi|258607950|gb|EEW20558.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258610876|gb|EEW23484.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293591893|gb|EFG00228.1| ATPase [Listeria monocytogenes J2818] Length = 503 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 4/53 (7%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K++FK L +E +F+ + + + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KIVFKQLTLE--NFKNHKNL--VVDYEQVTQISGKNGFGKTSIGEAVTWLLYG 50 >gi|325928159|ref|ZP_08189368.1| condensin subunit Smc [Xanthomonas perforans 91-118] gi|325541455|gb|EGD12988.1| condensin subunit Smc [Xanthomonas perforans 91-118] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|294626366|ref|ZP_06704968.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599367|gb|EFF43502.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|229172488|ref|ZP_04300047.1| SMC protein-like protein [Bacillus cereus MM3] gi|228610959|gb|EEK68222.1| SMC protein-like protein [Bacillus cereus MM3] Length = 1041 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 32 IEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 IE+ FR + E Q +F + +L ++ NG+GK+SL +AIEW R + + Sbjct: 8 IELGAFRAYEEKQTFDFINSKGQIANLVVIFAPNGFGKTSLLDAIEWGLTKEIHRFANNE 67 Query: 86 SIKK 89 +KK Sbjct: 68 VLKK 71 >gi|78047220|ref|YP_363395.1| chromosome segregation protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035650|emb|CAJ23341.1| Chromosome segregation protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1167 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|288560428|ref|YP_003423914.1| hypothetical protein mru_1172 [Methanobrevibacter ruminantium M1] gi|288543138|gb|ADC47022.1| hypothetical protein mru_1172 [Methanobrevibacter ruminantium M1] Length = 117 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT------QR 80 F + ++EI FRG ++ K +F ++ G NG GKSS+++A E+LF G Q Sbjct: 5 FNIKELEIRSFRGIKDL-KYDFEGKSLVLCGPNGCGKSSITQAFEYLFTGQVASLKGIQG 63 Query: 81 RKHGDSI 87 KH +S+ Sbjct: 64 VKHDESL 70 >gi|301066652|ref|YP_003788675.1| chromosome segregation ATPase [Lactobacillus casei str. Zhang] gi|300439059|gb|ADK18825.1| Chromosome segregation ATPase [Lactobacillus casei str. Zhang] Length = 1184 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|239631966|ref|ZP_04674997.1| chromosome segregation ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526431|gb|EEQ65432.1| chromosome segregation ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 1184 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|213966253|ref|ZP_03394437.1| DNA replication and repair protein RecF [Corynebacterium amycolatum SK46] gi|213951105|gb|EEB62503.1| DNA replication and repair protein RecF [Corynebacterium amycolatum SK46] Length = 399 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + FR + E++ +EF +T+ GQNGYGK+++ EA+ +L Sbjct: 6 LSLRDFRSWPELE-VEFTPGITVFTGQNGYGKTNIVEAVGYL 46 >gi|116495088|ref|YP_806822.1| chromosome segregation ATPase [Lactobacillus casei ATCC 334] gi|191638592|ref|YP_001987758.1| Chromosome seggregation Smc protein [Lactobacillus casei BL23] gi|227534897|ref|ZP_03964946.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116105238|gb|ABJ70380.1| condensin subunit Smc [Lactobacillus casei ATCC 334] gi|190712894|emb|CAQ66900.1| Chromosome seggregation Smc protein [Lactobacillus casei BL23] gi|227187653|gb|EEI67720.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327382634|gb|AEA54110.1| chromosome segregation protein SMC [Lactobacillus casei LC2W] gi|327385828|gb|AEA57302.1| chromosome segregation protein SMC [Lactobacillus casei BD-II] Length = 1184 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|258539822|ref|YP_003174321.1| chromosome partition protein smc [Lactobacillus rhamnosus Lc 705] gi|257151498|emb|CAR90470.1| Chromosome partition protein smc [Lactobacillus rhamnosus Lc 705] Length = 1184 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|229552451|ref|ZP_04441176.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus rhamnosus LMS2-1] gi|229314188|gb|EEN80161.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus rhamnosus LMS2-1] Length = 1184 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|222529134|ref|YP_002573016.1| SMC domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455981|gb|ACM60243.1| SMC domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 857 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYKDSQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|170731184|ref|YP_001776617.1| chromosome segregation protein [Xylella fastidiosa M12] gi|167965977|gb|ACA12987.1| chromosome segregation protein [Xylella fastidiosa M12] Length = 1167 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|28199809|ref|NP_780123.1| chromosome segregation protein [Xylella fastidiosa Temecula1] gi|182682561|ref|YP_001830721.1| chromosome segregation protein SMC [Xylella fastidiosa M23] gi|28057930|gb|AAO29772.1| chromosome segregation protein [Xylella fastidiosa Temecula1] gi|182632671|gb|ACB93447.1| chromosome segregation protein SMC [Xylella fastidiosa M23] gi|307578841|gb|ADN62810.1| chromosome segregation protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 1167 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|71898273|ref|ZP_00680447.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] gi|71732012|gb|EAO34069.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] Length = 1167 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|71899831|ref|ZP_00681981.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] gi|71730422|gb|EAO32503.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] Length = 1167 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|134299914|ref|YP_001113410.1| chromosome segregation protein SMC [Desulfotomaculum reducens MI-1] gi|134052614|gb|ABO50585.1| condensin subunit Smc [Desulfotomaculum reducens MI-1] Length = 1186 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++ K +DI+ F+ F + K+E L++V G NG GKS++S+AI W Sbjct: 1 MVLKRMDIQ--GFKSFGDRVKLELHSGLSVVVGPNGSGKSNISDAISW 46 >gi|312622589|ref|YP_004024202.1| chromosome segregation protein smc [Caldicellulosiruptor kronotskyensis 2002] gi|312203056|gb|ADQ46383.1| chromosome segregation protein SMC [Caldicellulosiruptor kronotskyensis 2002] Length = 1177 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFEKGITAIVGPNGCGKSNITDAIRW 46 >gi|312872636|ref|ZP_07732701.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2062A-h1] gi|311091678|gb|EFQ50057.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2062A-h1] Length = 373 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|148544382|ref|YP_001271752.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016] gi|184153746|ref|YP_001842087.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|227363193|ref|ZP_03847327.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri MM2-3] gi|325682702|ref|ZP_08162218.1| cell division protein Smc [Lactobacillus reuteri MM4-1A] gi|148531416|gb|ABQ83415.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016] gi|183225090|dbj|BAG25607.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|227071799|gb|EEI10088.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri MM2-3] gi|324977052|gb|EGC14003.1| cell division protein Smc [Lactobacillus reuteri MM4-1A] Length = 1187 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD + Sbjct: 2 QLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDRM 61 >gi|71275193|ref|ZP_00651480.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Dixon] gi|71164002|gb|EAO13717.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Dixon] Length = 1167 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS+ Sbjct: 2 RLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61 >gi|312622615|ref|YP_004024228.1| SMC domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203082|gb|ADQ46409.1| SMC domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 857 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 34 ISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R + G Sbjct: 8 IENFKSYKDSQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG 60 >gi|295099735|emb|CBK88824.1| SMC proteins Flexible Hinge Domain./RecF/RecN/SMC N terminal domain. [Eubacterium cylindroides T2-87] Length = 526 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + I+F + +T + G NG GKS++++AI W+ Sbjct: 6 IELQGFKSFADKTIIQFENDITGIVGPNGCGKSNVNDAIRWVL 48 >gi|66044668|ref|YP_234509.1| hypothetical protein Psyr_1420 [Pseudomonas syringae pv. syringae B728a] gi|63255375|gb|AAY36471.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 874 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +++ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLQVGPFRGFMRPEAFDLSHDITLVYGANGTGKSSFFEALEVAMLG 130 >gi|325127621|gb|EGC50537.1| chromosome segregation protein SMC [Neisseria meningitidis N1568] Length = 1161 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTDPTTIYVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|259500774|ref|ZP_05743676.1| recombination protein F [Lactobacillus iners DSM 13335] gi|302190775|ref|ZP_07267029.1| recombination protein F [Lactobacillus iners AB-1] gi|312874858|ref|ZP_07734877.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2053A-b] gi|325913713|ref|ZP_08176075.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 60-B] gi|329919805|ref|ZP_08276756.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 1401G] gi|259167468|gb|EEW51963.1| recombination protein F [Lactobacillus iners DSM 13335] gi|311089603|gb|EFQ48028.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2053A-b] gi|325477072|gb|EGC80222.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 60-B] gi|328937152|gb|EGG33580.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 1401G] Length = 373 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|309804122|ref|ZP_07698203.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 11V1-d] gi|309809779|ref|ZP_07703633.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 2503V10-D] gi|308163890|gb|EFO66156.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 11V1-d] gi|308169958|gb|EFO71997.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 2503V10-D] Length = 373 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|229104410|ref|ZP_04235079.1| Chromosome partition protein smc [Bacillus cereus Rock3-28] gi|228679108|gb|EEL33316.1| Chromosome partition protein smc [Bacillus cereus Rock3-28] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229117334|ref|ZP_04246712.1| Chromosome partition protein smc [Bacillus cereus Rock1-3] gi|228666234|gb|EEL21698.1| Chromosome partition protein smc [Bacillus cereus Rock1-3] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|312127774|ref|YP_003992648.1| chromosome segregation protein smc [Caldicellulosiruptor hydrothermalis 108] gi|311777793|gb|ADQ07279.1| chromosome segregation protein SMC [Caldicellulosiruptor hydrothermalis 108] Length = 1177 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRW 46 >gi|312873299|ref|ZP_07733354.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2052A-d] gi|311091179|gb|EFQ49568.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2052A-d] Length = 373 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|312984415|ref|ZP_07791750.1| cell division protein Smc [Lactobacillus crispatus CTV-05] gi|310894190|gb|EFQ43277.1| cell division protein Smc [Lactobacillus crispatus CTV-05] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTNMK 62 >gi|295693171|ref|YP_003601781.1| chromosome segregation protein smc [Lactobacillus crispatus ST1] gi|295031277|emb|CBL50756.1| Chromosome segregation protein Smc [Lactobacillus crispatus ST1] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTNMK 62 >gi|199597131|ref|ZP_03210563.1| Chromosome segregation ATPase [Lactobacillus rhamnosus HN001] gi|258508645|ref|YP_003171396.1| chromosome partition protein smc [Lactobacillus rhamnosus GG] gi|199591935|gb|EDZ00010.1| Chromosome segregation ATPase [Lactobacillus rhamnosus HN001] gi|257148572|emb|CAR87545.1| Chromosome partition protein smc [Lactobacillus rhamnosus GG] gi|259649951|dbj|BAI42113.1| chromosome segregation protein [Lactobacillus rhamnosus GG] Length = 1184 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 26/39 (66%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I+ F+ F + +I+F LT + G NG GKS+++EAI W Sbjct: 8 INGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRW 46 >gi|110833808|ref|YP_692667.1| chromosome segregation SMC protein [Alcanivorax borkumensis SK2] gi|110646919|emb|CAL16395.1| chromosome segregation SMC protein [Alcanivorax borkumensis SK2] Length = 1166 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + F ++LT V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTTYFPENLTAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGESM 61 >gi|312871309|ref|ZP_07731407.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 3008A-a] gi|311093323|gb|EFQ51669.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 3008A-a] Length = 373 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|126175901|ref|YP_001052050.1| SMC domain-containing protein [Shewanella baltica OS155] gi|125999106|gb|ABN63181.1| SMC domain protein [Shewanella baltica OS155] Length = 881 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I + FRGF ++ + + + + G NG GK+SL EA+E+ G Sbjct: 86 LCHISLGPFRGFRNVEDFDLSRRIVLFYGPNGSGKTSLCEALEFALLG 133 >gi|312877060|ref|ZP_07737033.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796201|gb|EFR12557.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 935 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRW 46 >gi|312793350|ref|YP_004026273.1| chromosome segregation protein smc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180490|gb|ADQ40660.1| chromosome segregation protein SMC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1177 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRW 46 >gi|258611594|ref|ZP_05711569.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N3-165] gi|258601612|gb|EEW14937.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N3-165] Length = 604 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + I+F +T V G NG GKS+++EAI W+ Sbjct: 6 LEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|329765638|ref|ZP_08257212.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137882|gb|EGG42144.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 692 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 IE+ F ++ ++EF + +T+ GQNG GKSS+ +AI + +G R+ + IK+ S Sbjct: 5 IELGDFLSHSQ-TRLEFGNGVTVFVGQNGAGKSSIIDAITFALFGQHTRKSNKGLIKRGS 63 >gi|228986991|ref|ZP_04147117.1| Chromosome partition protein smc [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772769|gb|EEM21209.1| Chromosome partition protein smc [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229031478|ref|ZP_04187478.1| Chromosome partition protein smc [Bacillus cereus AH1271] gi|228729767|gb|EEL80747.1| Chromosome partition protein smc [Bacillus cereus AH1271] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229098317|ref|ZP_04229264.1| Chromosome partition protein smc [Bacillus cereus Rock3-29] gi|228685215|gb|EEL39146.1| Chromosome partition protein smc [Bacillus cereus Rock3-29] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229134656|ref|ZP_04263465.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST196] gi|228648702|gb|EEL04728.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST196] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229174514|ref|ZP_04302046.1| Chromosome partition protein smc [Bacillus cereus MM3] gi|228609074|gb|EEK66364.1| Chromosome partition protein smc [Bacillus cereus MM3] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|218899001|ref|YP_002447412.1| chromosome segregation SMC protein [Bacillus cereus G9842] gi|218543105|gb|ACK95499.1| chromosome segregation SMC protein [Bacillus cereus G9842] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|167636668|ref|ZP_02394958.1| chromosome segregation SMC protein [Bacillus anthracis str. A0442] gi|170689651|ref|ZP_02880832.1| chromosome segregation SMC protein [Bacillus anthracis str. A0465] gi|196035877|ref|ZP_03103279.1| chromosome segregation SMC protein [Bacillus cereus W] gi|228916485|ref|ZP_04080051.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928896|ref|ZP_04091928.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229123362|ref|ZP_04252566.1| Chromosome partition protein smc [Bacillus cereus 95/8201] gi|254683444|ref|ZP_05147304.1| chromosome segregation SMC protein [Bacillus anthracis str. CNEVA-9066] gi|254721379|ref|ZP_05183168.1| chromosome segregation SMC protein [Bacillus anthracis str. A1055] gi|254739519|ref|ZP_05197216.1| chromosome segregation SMC protein [Bacillus anthracis str. Kruger B] gi|167527919|gb|EDR90735.1| chromosome segregation SMC protein [Bacillus anthracis str. A0442] gi|170666396|gb|EDT17178.1| chromosome segregation SMC protein [Bacillus anthracis str. A0465] gi|195991526|gb|EDX55492.1| chromosome segregation SMC protein [Bacillus cereus W] gi|228660138|gb|EEL15774.1| Chromosome partition protein smc [Bacillus cereus 95/8201] gi|228830703|gb|EEM76308.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843064|gb|EEM88146.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|47570281|ref|ZP_00240930.1| reticulocyte binding protein [Bacillus cereus G9241] gi|47553045|gb|EAL11447.1| reticulocyte binding protein [Bacillus cereus G9241] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|172057913|ref|YP_001814373.1| chromosome segregation protein SMC [Exiguobacterium sibiricum 255-15] gi|171990434|gb|ACB61356.1| chromosome segregation protein SMC [Exiguobacterium sibiricum 255-15] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI+ F+ F +++F +T V G NG GKS++S+A+ W+ Sbjct: 6 IEINGFKSFASRTELDFLPGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|228902351|ref|ZP_04066508.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 4222] gi|228857320|gb|EEN01823.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 4222] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|228909673|ref|ZP_04073496.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 200] gi|228849962|gb|EEM94793.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 200] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|228922602|ref|ZP_04085902.1| Chromosome partition protein smc [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837031|gb|EEM82372.1| Chromosome partition protein smc [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|228947567|ref|ZP_04109857.1| Chromosome partition protein smc [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228812087|gb|EEM58418.1| Chromosome partition protein smc [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229019044|ref|ZP_04175884.1| Chromosome partition protein smc [Bacillus cereus AH1273] gi|229025289|ref|ZP_04181709.1| Chromosome partition protein smc [Bacillus cereus AH1272] gi|228736042|gb|EEL86617.1| Chromosome partition protein smc [Bacillus cereus AH1272] gi|228742246|gb|EEL92406.1| Chromosome partition protein smc [Bacillus cereus AH1273] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229061451|ref|ZP_04198796.1| Chromosome partition protein smc [Bacillus cereus AH603] gi|228717874|gb|EEL69522.1| Chromosome partition protein smc [Bacillus cereus AH603] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229157424|ref|ZP_04285502.1| Chromosome partition protein smc [Bacillus cereus ATCC 4342] gi|228626151|gb|EEK82900.1| Chromosome partition protein smc [Bacillus cereus ATCC 4342] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229162784|ref|ZP_04290741.1| Chromosome partition protein smc [Bacillus cereus R309803] gi|228620666|gb|EEK77535.1| Chromosome partition protein smc [Bacillus cereus R309803] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|163941586|ref|YP_001646470.1| chromosome segregation protein SMC [Bacillus weihenstephanensis KBAB4] gi|229013031|ref|ZP_04170196.1| Chromosome partition protein smc [Bacillus mycoides DSM 2048] gi|229168587|ref|ZP_04296310.1| Chromosome partition protein smc [Bacillus cereus AH621] gi|163863783|gb|ABY44842.1| chromosome segregation protein SMC [Bacillus weihenstephanensis KBAB4] gi|228614993|gb|EEK72095.1| Chromosome partition protein smc [Bacillus cereus AH621] gi|228748285|gb|EEL98145.1| Chromosome partition protein smc [Bacillus mycoides DSM 2048] Length = 1189 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|315654134|ref|ZP_07907050.1| recombination protein F [Lactobacillus iners ATCC 55195] gi|315488830|gb|EFU78476.1| recombination protein F [Lactobacillus iners ATCC 55195] Length = 373 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + H S+ Sbjct: 3 LEDLTLKDFRNFDRV-KVNFDSHINIFIGKNAQGKTNLLEAIYFL----ALTKSHRTSVD 57 Query: 89 KRSIKTPMPMC 99 K IK M + Sbjct: 58 KELIKFNMKIA 68 >gi|228935162|ref|ZP_04097989.1| Chromosome partition protein smc [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824527|gb|EEM70332.1| Chromosome partition protein smc [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|227878859|ref|ZP_03996765.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01] gi|256843376|ref|ZP_05548864.1| chromosome segregation protein SMC [Lactobacillus crispatus 125-2-CHN] gi|256849802|ref|ZP_05555233.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US] gi|262046953|ref|ZP_06019913.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US] gi|227861550|gb|EEJ69163.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01] gi|256614796|gb|EEU19997.1| chromosome segregation protein SMC [Lactobacillus crispatus 125-2-CHN] gi|256713291|gb|EEU28281.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US] gi|260572935|gb|EEX29495.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTNMK 62 >gi|118479070|ref|YP_896221.1| condensin subunit Smc [Bacillus thuringiensis str. Al Hakam] gi|225865829|ref|YP_002751207.1| chromosome segregation SMC protein [Bacillus cereus 03BB102] gi|229186088|ref|ZP_04313257.1| Chromosome partition protein smc [Bacillus cereus BGSC 6E1] gi|118418295|gb|ABK86714.1| condensin subunit Smc [Bacillus thuringiensis str. Al Hakam] gi|225789332|gb|ACO29549.1| chromosome segregation SMC protein [Bacillus cereus 03BB102] gi|228597264|gb|EEK54915.1| Chromosome partition protein smc [Bacillus cereus BGSC 6E1] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|30263851|ref|NP_846228.1| chromosome segregation SMC protein [Bacillus anthracis str. Ames] gi|47529276|ref|YP_020625.1| chromosome segregation SMC protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186698|ref|YP_029950.1| chromosome segregation SMC protein [Bacillus anthracis str. Sterne] gi|65321176|ref|ZP_00394135.1| COG1196: Chromosome segregation ATPases [Bacillus anthracis str. A2012] gi|165873293|ref|ZP_02217901.1| chromosome segregation SMC protein [Bacillus anthracis str. A0488] gi|167642019|ref|ZP_02400250.1| chromosome segregation SMC protein [Bacillus anthracis str. A0193] gi|170709349|ref|ZP_02899764.1| chromosome segregation SMC protein [Bacillus anthracis str. A0389] gi|177655963|ref|ZP_02937115.1| chromosome segregation SMC protein [Bacillus anthracis str. A0174] gi|190565740|ref|ZP_03018659.1| chromosome segregation SMC protein [Bacillus anthracis Tsiankovskii-I] gi|227813244|ref|YP_002813253.1| chromosome segregation SMC protein [Bacillus anthracis str. CDC 684] gi|229602083|ref|YP_002868085.1| chromosome segregation SMC protein [Bacillus anthracis str. A0248] gi|254735886|ref|ZP_05193592.1| chromosome segregation SMC protein [Bacillus anthracis str. Western North America USA6153] gi|254751173|ref|ZP_05203212.1| chromosome segregation SMC protein [Bacillus anthracis str. Vollum] gi|254756721|ref|ZP_05208750.1| chromosome segregation SMC protein [Bacillus anthracis str. Australia 94] gi|30258495|gb|AAP27714.1| chromosome segregation SMC protein [Bacillus anthracis str. Ames] gi|47504424|gb|AAT33100.1| chromosome segregation SMC protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180625|gb|AAT56001.1| chromosome segregation SMC protein [Bacillus anthracis str. Sterne] gi|164710978|gb|EDR16547.1| chromosome segregation SMC protein [Bacillus anthracis str. A0488] gi|167510018|gb|EDR85433.1| chromosome segregation SMC protein [Bacillus anthracis str. A0193] gi|170125744|gb|EDS94656.1| chromosome segregation SMC protein [Bacillus anthracis str. A0389] gi|172079907|gb|EDT65014.1| chromosome segregation SMC protein [Bacillus anthracis str. A0174] gi|190562659|gb|EDV16625.1| chromosome segregation SMC protein [Bacillus anthracis Tsiankovskii-I] gi|227003537|gb|ACP13280.1| chromosome segregation SMC protein [Bacillus anthracis str. CDC 684] gi|229266491|gb|ACQ48128.1| chromosome segregation SMC protein [Bacillus anthracis str. A0248] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|301055338|ref|YP_003793549.1| chromosome segregation SMC protein [Bacillus anthracis CI] gi|300377507|gb|ADK06411.1| chromosome segregation SMC protein [Bacillus cereus biovar anthracis str. CI] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229146419|ref|ZP_04274790.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST24] gi|228637052|gb|EEK93511.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST24] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229152047|ref|ZP_04280242.1| Chromosome partition protein smc [Bacillus cereus m1550] gi|228631396|gb|EEK88030.1| Chromosome partition protein smc [Bacillus cereus m1550] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|218904978|ref|YP_002452812.1| chromosome segregation SMC protein [Bacillus cereus AH820] gi|218536104|gb|ACK88502.1| chromosome segregation SMC protein [Bacillus cereus AH820] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|218233136|ref|YP_002368649.1| chromosome segregation SMC protein [Bacillus cereus B4264] gi|218161093|gb|ACK61085.1| chromosome segregation SMC protein [Bacillus cereus B4264] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|49478913|ref|YP_037909.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330469|gb|AAT61115.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|30021936|ref|NP_833567.1| chromosome partition protein smc [Bacillus cereus ATCC 14579] gi|229129124|ref|ZP_04258097.1| Chromosome partition protein smc [Bacillus cereus BDRD-Cer4] gi|29897492|gb|AAP10768.1| Chromosome partition protein smc [Bacillus cereus ATCC 14579] gi|228654361|gb|EEL10226.1| Chromosome partition protein smc [Bacillus cereus BDRD-Cer4] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|312135007|ref|YP_004002345.1| chromosome segregation protein smc [Caldicellulosiruptor owensensis OL] gi|311775058|gb|ADQ04545.1| chromosome segregation protein SMC [Caldicellulosiruptor owensensis OL] Length = 1177 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IEF +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRW 46 >gi|154500960|ref|ZP_02038998.1| hypothetical protein BACCAP_04646 [Bacteroides capillosus ATCC 29799] gi|150269984|gb|EDM97503.1| hypothetical protein BACCAP_04646 [Bacteroides capillosus ATCC 29799] Length = 1192 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F + + F + +T + G NG GKS++S+AI W+ + R G ++ Sbjct: 9 LEIQGFKSFPDKTVLTFGEDVTAIVGPNGSGKSNISDAIRWVMGEQSTRALRGGKME 65 >gi|121533799|ref|ZP_01665626.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1] gi|121307790|gb|EAX48705.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1] Length = 1185 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +E+ F+ F + ++EF +T + G NG GKS++++AI W Sbjct: 3 LRKLELYGFKSFADKTEVEFGPGITAIVGPNGSGKSNITDAIRW 46 >gi|297618563|ref|YP_003706668.1| SMC domain-containing protein [Methanococcus voltae A3] gi|297618623|ref|YP_003706728.1| SMC domain-containing protein [Methanococcus voltae A3] gi|297377540|gb|ADI35695.1| SMC domain protein [Methanococcus voltae A3] gi|297377600|gb|ADI35755.1| SMC domain protein [Methanococcus voltae A3] Length = 1113 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +I K L E+ +FR KIEF + +T + G+NG GKSS+ +AI + + ++R+ Sbjct: 2 GQNMILKTL--ELQNFRSHRN-SKIEFKEGITTIVGKNGSGKSSIFQAINYALFAPSKRK 58 Query: 82 KH 83 ++ Sbjct: 59 EY 60 >gi|260101400|ref|ZP_05751637.1| cell division protein Smc [Lactobacillus helveticus DSM 20075] gi|260084740|gb|EEW68860.1| cell division protein Smc [Lactobacillus helveticus DSM 20075] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGMNMK 62 >gi|42782940|ref|NP_980187.1| chromosome segregation SMC protein [Bacillus cereus ATCC 10987] gi|217961268|ref|YP_002339836.1| chromosome segregation SMC protein [Bacillus cereus AH187] gi|229140492|ref|ZP_04269047.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST26] gi|229197959|ref|ZP_04324673.1| Chromosome partition protein smc [Bacillus cereus m1293] gi|42738867|gb|AAS42795.1| chromosome segregation SMC protein [Bacillus cereus ATCC 10987] gi|217063100|gb|ACJ77350.1| chromosome segregation SMC protein [Bacillus cereus AH187] gi|228585438|gb|EEK43542.1| Chromosome partition protein smc [Bacillus cereus m1293] gi|228643053|gb|EEK99329.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST26] gi|324327745|gb|ADY23005.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1189 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|228960064|ref|ZP_04121728.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799580|gb|EEM46533.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|228940936|ref|ZP_04103495.1| Chromosome partition protein smc [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973865|ref|ZP_04134441.1| Chromosome partition protein smc [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980455|ref|ZP_04140765.1| Chromosome partition protein smc [Bacillus thuringiensis Bt407] gi|228779275|gb|EEM27532.1| Chromosome partition protein smc [Bacillus thuringiensis Bt407] gi|228785890|gb|EEM33893.1| Chromosome partition protein smc [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818772|gb|EEM64838.1| Chromosome partition protein smc [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941617|gb|AEA17513.1| chromosome partition protein smc [Bacillus thuringiensis serovar chinensis CT-43] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229071346|ref|ZP_04204569.1| Chromosome partition protein smc [Bacillus cereus F65185] gi|229081103|ref|ZP_04213613.1| Chromosome partition protein smc [Bacillus cereus Rock4-2] gi|228702147|gb|EEL54623.1| Chromosome partition protein smc [Bacillus cereus Rock4-2] gi|228711800|gb|EEL63752.1| Chromosome partition protein smc [Bacillus cereus F65185] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229092890|ref|ZP_04224024.1| Chromosome partition protein smc [Bacillus cereus Rock3-42] gi|228690512|gb|EEL44295.1| Chromosome partition protein smc [Bacillus cereus Rock3-42] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229047535|ref|ZP_04193125.1| Chromosome partition protein smc [Bacillus cereus AH676] gi|229111319|ref|ZP_04240872.1| Chromosome partition protein smc [Bacillus cereus Rock1-15] gi|228672095|gb|EEL27386.1| Chromosome partition protein smc [Bacillus cereus Rock1-15] gi|228723782|gb|EEL75137.1| Chromosome partition protein smc [Bacillus cereus AH676] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|229180124|ref|ZP_04307468.1| Chromosome partition protein smc [Bacillus cereus 172560W] gi|228603333|gb|EEK60810.1| Chromosome partition protein smc [Bacillus cereus 172560W] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|222097293|ref|YP_002531350.1| chromosome segregation smc protein [Bacillus cereus Q1] gi|221241351|gb|ACM14061.1| chromosome segregation SMC protein [Bacillus cereus Q1] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|196042324|ref|ZP_03109600.1| chromosome segregation SMC protein [Bacillus cereus NVH0597-99] gi|196026846|gb|EDX65477.1| chromosome segregation SMC protein [Bacillus cereus NVH0597-99] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|56459115|ref|YP_154396.1| recombinational DNA repair ATPase [Idiomarina loihiensis L2TR] gi|81678377|sp|Q5QY37|RECF_IDILO RecName: Full=DNA replication and repair protein recF gi|56178125|gb|AAV80847.1| Recombinational DNA repair ATPase [Idiomarina loihiensis L2TR] Length = 354 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +SHFR F+E+ + + + I+ G NG GK+SL EAI L +G + R Sbjct: 6 LNLSHFRNFSEV-ALSPSPKINIITGDNGSGKTSLLEAIYLLGFGRSFR 53 >gi|256962366|ref|ZP_05566537.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|293385316|ref|ZP_06631129.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293386572|ref|ZP_06631155.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312908106|ref|ZP_07767086.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312979001|ref|ZP_07790721.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256952862|gb|EEU69494.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|291077422|gb|EFE14786.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291083977|gb|EFE20940.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310625917|gb|EFQ09200.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311288180|gb|EFQ66736.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 700 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDSIKK 89 ++EI +FRGF KI + + ++ GQN GK+++ +A+E LF G ++ GD K Sbjct: 5 ELEIENFRGFNYKTKILLNNSINVLIGQNNSGKTTIIKAMELLFSDGSKKKLSVGDFYKN 64 Query: 90 RSI 92 +I Sbjct: 65 ITI 67 >gi|225076848|ref|ZP_03720047.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] gi|224951834|gb|EEG33043.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] Length = 1161 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFTAPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|88800011|ref|ZP_01115582.1| hypothetical protein MED297_17912 [Reinekea sp. MED297] gi|88777289|gb|EAR08493.1| hypothetical protein MED297_17912 [Reinekea sp. MED297] Length = 1166 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 34/59 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F +L+ + G NG GKS+ +A+ W+ + + G+S Sbjct: 2 RLKSIKLAGFKSFVDPTKIPFPTNLSAIVGPNGCGKSNTIDAVRWVMGESSAKHLRGES 60 >gi|52141633|ref|YP_085189.1| chromosome segregation SMC protein [Bacillus cereus E33L] gi|51975102|gb|AAU16652.1| chromosome segregation SMC protein [Bacillus cereus E33L] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|304392439|ref|ZP_07374380.1| DNA replication and repair protein RecF [Ahrensia sp. R2A130] gi|303295543|gb|EFL89902.1| DNA replication and repair protein RecF [Ahrensia sp. R2A130] Length = 391 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIV-NGQNGYGKSSLSEAIEWLFY 75 ++S+ A + + +++ HFR + ++ + DH +V G+NG GK++L EAI +L Sbjct: 1 MSSFLAAEKGVAITTLKLDHFRNYDTLRLL--CDHRHVVLTGENGSGKTNLLEAISFLSP 58 Query: 76 GYTQRRKHGDSIKK 89 G RR D + K Sbjct: 59 GRGLRRTSYDQVAK 72 >gi|229086401|ref|ZP_04218577.1| Chromosome partition protein smc [Bacillus cereus Rock3-44] gi|228696917|gb|EEL49726.1| Chromosome partition protein smc [Bacillus cereus Rock3-44] Length = 1190 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|323466306|gb|ADX69993.1| Cell division protein Smc [Lactobacillus helveticus H10] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGMNMK 62 >gi|229192017|ref|ZP_04318987.1| Chromosome partition protein smc [Bacillus cereus ATCC 10876] gi|228591568|gb|EEK49417.1| Chromosome partition protein smc [Bacillus cereus ATCC 10876] Length = 1189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAEHVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|313112549|ref|ZP_07798213.1| putative recombination protein F [Faecalibacterium cf. prausnitzii KLE1255] gi|310625131|gb|EFQ08422.1| putative recombination protein F [Faecalibacterium cf. prausnitzii KLE1255] Length = 373 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E++++R Q +E LT++ G NG GK++L EAI WL G R D+ Sbjct: 2 RLLSLEVANYRNIAAAQ-LEPGRELTVICGNNGQGKTNLLEAI-WLLTGGKSFRGGKDA 58 >gi|257413969|ref|ZP_04744813.2| putative RecF/RecN/SMC N domain protein [Roseburia intestinalis L1-82] gi|257201668|gb|EEU99952.1| putative RecF/RecN/SMC N domain protein [Roseburia intestinalis L1-82] Length = 805 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 32 IEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I+I +FRGF+E + EF ++ NG GK+S+ +AIEW G +R G Sbjct: 11 IKIINFRGFSEEKIFEFEGKPFVMLTAPNGKGKTSVIDAIEWCMTGDIKRLHEG 64 >gi|299821774|ref|ZP_07053662.1| cell division protein Smc [Listeria grayi DSM 20601] gi|299817439|gb|EFI84675.1| cell division protein Smc [Listeria grayi DSM 20601] Length = 1185 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E++ F+ F + ++F +T V G NG GKS+++EAI W+ Sbjct: 3 LKKLEMNGFKSFADKVTVDFVPGMTAVVGPNGSGKSNITEAIRWVL 48 >gi|238028388|ref|YP_002912619.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia glumae BGR1] gi|237877582|gb|ACR29915.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia glumae BGR1] Length = 607 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E + AD T V G+N GKSS+ EA+E F T + + GD+ Sbjct: 2 RLESVSIKNFRCYREETTVSMADLTTFV-GKNDIGKSSVLEALEIFFNNETVKIEQGDA 59 >gi|227872402|ref|ZP_03990749.1| possible SMC structural maintenance of chromosomes partitioning protein [Oribacterium sinus F0268] gi|227841762|gb|EEJ52045.1| possible SMC structural maintenance of chromosomes partitioning protein [Oribacterium sinus F0268] Length = 1087 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F ++F+ +T + G NG GKS++S+A+ W+ ++ G+S++ Sbjct: 3 LKSIEIQGFKSFANKTVLDFSPGITGIVGPNGSGKSNISDAVRWVLGEQKVKQLRGNSMQ 62 >gi|293381176|ref|ZP_06627184.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus 214-1] gi|290922216|gb|EFD99210.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus 214-1] Length = 847 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTNMK 62 >gi|227892634|ref|ZP_04010439.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM 16047] gi|227865566|gb|EEJ72987.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM 16047] Length = 1189 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTIIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|166363921|ref|YP_001656194.1| hypothetical protein MAE_11800 [Microcystis aeruginosa NIES-843] gi|166086294|dbj|BAG01002.1| hypothetical protein MAE_11800 [Microcystis aeruginosa NIES-843] Length = 364 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 DIEIS+FR F E KIE + + ++ G+N GK++L EAI Y Y Sbjct: 4 DIEISNFRCF-EHTKIEGFERVNLIGGKNNSGKTALLEAIFLYSYPY 49 >gi|221135257|ref|ZP_03561560.1| Recombinational DNA repair ATPase [Glaciecola sp. HTCC2999] Length = 366 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL ++IS FR E I + HL +V GQNG GKSS E++ +L +G + R Sbjct: 2 KLDKVQISQFRNI-ESATIYPSAHLNVVIGQNGSGKSSFLESLHYLGFGRSFR 53 >gi|150016056|ref|YP_001308310.1| chromosome segregation protein SMC [Clostridium beijerinckii NCIMB 8052] gi|149902521|gb|ABR33354.1| chromosome segregation protein SMC [Clostridium beijerinckii NCIMB 8052] Length = 1185 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLEIRGFKSFADKTELKFKQGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|256822389|ref|YP_003146352.1| chromosome segregation protein SMC [Kangiella koreensis DSM 16069] gi|256795928|gb|ACV26584.1| chromosome segregation protein SMC [Kangiella koreensis DSM 16069] Length = 1165 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + +LT + G NG GKS+L +A+ W+ + + GD++ Sbjct: 2 RLKQIKLAGFKSFVDPTTVSLPSNLTAIVGPNGCGKSNLIDAVRWVMGESSAKNLRGDAM 61 >gi|282890838|ref|ZP_06299356.1| hypothetical protein pah_c028o014 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499266|gb|EFB41567.1| hypothetical protein pah_c028o014 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1168 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 31/49 (63%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +L +IEI+ F+ F + ++F + +T + G NG GKS+ ++A W+ Sbjct: 4 VLRLKEIEITGFKSFADRTTLKFHEGITAIVGPNGCGKSNTADAFRWVL 52 >gi|218905695|ref|YP_002453529.1| RecF/RecN/SMC N domain, putative [Bacillus cereus AH820] gi|218539280|gb|ACK91678.1| RecF/RecN/SMC N domain, putative [Bacillus cereus AH820] Length = 875 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 34 ISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 I++FRG++ F D L ++ G NGYGK+SL +A+EW G +R + I+ Sbjct: 13 INNFRGYSYGTFEFFKDKDEKRGLILLGGPNGYGKTSLLDAVEWCLSGTIRRIQEDYEIR 72 Query: 89 KRSIKT 94 K + T Sbjct: 73 KETSNT 78 >gi|270292631|ref|ZP_06198842.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270278610|gb|EFA24456.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 1179 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTRVVFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|291558077|emb|CBL35194.1| hypothetical protein ES1_23660 [Eubacterium siraeum V10Sc8a] Length = 660 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 6/56 (10%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ K L +E +FR F K++F+ ++TI+ G N +GK++L +A W FYG Sbjct: 1 MLIKTLRME--NFRQFRGTTKVDFSCDPNKNVTIILGDNTFGKTTLLQAFNWCFYG 54 >gi|226313208|ref|YP_002773102.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599] gi|226096156|dbj|BAH44598.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599] Length = 1190 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + ++EF +T V G NG GKS++S++I W+ Sbjct: 6 LELAGFKSFADRTELEFVPGVTAVVGPNGSGKSNVSDSIRWVL 48 >gi|324991598|gb|EGC23531.1| RecF/RecN/SMC N domain protein [Streptococcus sanguinis SK353] Length = 887 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 35/64 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I I +F+ + I+F D++T+ G NG+GK+++ +AIE G +R D Sbjct: 2 RIQKILIKNFKNVKGTKVIDFQDNVTLFVGPNGFGKTTIFDAIELSLTGKIRRITESDYT 61 Query: 88 KKRS 91 RS Sbjct: 62 DGRS 65 >gi|255318626|ref|ZP_05359857.1| chromosome segregation protein SMC [Acinetobacter radioresistens SK82] gi|262379148|ref|ZP_06072304.1| chromosome segregation protein SMC [Acinetobacter radioresistens SH164] gi|255304308|gb|EET83494.1| chromosome segregation protein SMC [Acinetobacter radioresistens SK82] gi|262298605|gb|EEY86518.1| chromosome segregation protein SMC [Acinetobacter radioresistens SH164] Length = 1149 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F D + V G NG GKS++ +AI W+ + R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFRDSRSAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|167624498|ref|YP_001674792.1| chromosome segregation protein SMC [Shewanella halifaxensis HAW-EB4] gi|167354520|gb|ABZ77133.1| chromosome segregation protein SMC [Shewanella halifaxensis HAW-EB4] Length = 1143 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + KI L+ + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKQIKLAGFKSFVDPTKIPLLSPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSM 61 >gi|319938299|ref|ZP_08012696.1| chromosome segregation ATPase [Coprobacillus sp. 29_1] gi|319806592|gb|EFW03250.1| chromosome segregation ATPase [Coprobacillus sp. 29_1] Length = 981 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + IEF +T + G NG GKS++S+A+ W+ Sbjct: 6 IELHGFKSFADKSVIEFQPGITGIVGPNGCGKSNISDAVRWVL 48 >gi|156977416|ref|YP_001448322.1| hypothetical protein VIBHAR_06203 [Vibrio harveyi ATCC BAA-1116] gi|156529010|gb|ABU74095.1| hypothetical protein VIBHAR_06203 [Vibrio harveyi ATCC BAA-1116] Length = 669 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + IS+F+ F ++ +IEF + LT + G NG GK+S A+ +F RK Sbjct: 2 KLSKVRISNFQCFGKLTEIEFEEDLTALIGLNGSGKTSTLHALSRMFGVTESSRK 56 >gi|152976214|ref|YP_001375731.1| chromosome segregation protein SMC [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024966|gb|ABS22736.1| chromosome segregation protein SMC [Bacillus cytotoxicus NVH 391-98] Length = 1189 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVAVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|120554092|ref|YP_958443.1| chromosome segregation protein SMC [Marinobacter aquaeolei VT8] gi|120323941|gb|ABM18256.1| condensin subunit Smc [Marinobacter aquaeolei VT8] Length = 1163 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGESM 61 >gi|28210932|ref|NP_781876.1| chromosome segregation protein smc2 [Clostridium tetani E88] gi|28203371|gb|AAO35813.1| chromosome segregation protein smc2 [Clostridium tetani E88] Length = 1186 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F +I F +T + G NG GKS++S+AI W+ Sbjct: 6 LEIRGFKSFANKTEINFQKGITAIVGPNGSGKSNISDAIRWVL 48 >gi|239616597|ref|YP_002939919.1| chromosome segregation protein SMC [Kosmotoga olearia TBF 19.5.1] gi|239505428|gb|ACR78915.1| chromosome segregation protein SMC [Kosmotoga olearia TBF 19.5.1] Length = 1173 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L+ I I F+ F KI+ + +T + G NG GKS++ +AI W+F Sbjct: 2 RLVSIFIKGFKSFAYPTKIDISKGITAIVGPNGSGKSNIVDAIRWVF 48 >gi|257084618|ref|ZP_05578979.1| predicted protein [Enterococcus faecalis Fly1] gi|256992648|gb|EEU79950.1| predicted protein [Enterococcus faecalis Fly1] Length = 755 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 FK+ ++EIS+ R + + F +TI++G NGYGK++ +AIE L G Sbjct: 6 FKINNVEISNLRNIPYDKPLTFELSKQMITILDGPNGYGKTTFFDAIELLITG 58 >gi|319946573|ref|ZP_08020807.1| SMC family domain protein [Streptococcus australis ATCC 700641] gi|319746621|gb|EFV98880.1| SMC family domain protein [Streptococcus australis ATCC 700641] Length = 1181 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +IEI F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKEIEIQGFKSFADKTRVIFDQGVTAVVGPNGSGKSNITESLRW 46 >gi|237668952|ref|ZP_04528936.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] gi|237657300|gb|EEP54856.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1187 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLEIRGFKSFADKTELKFKKGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|182417241|ref|ZP_02948594.1| chromosome segregation protein SMC [Clostridium butyricum 5521] gi|182378887|gb|EDT76400.1| chromosome segregation protein SMC [Clostridium butyricum 5521] Length = 1187 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLEIRGFKSFADKTELKFKKGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|75762037|ref|ZP_00741949.1| Chromosome partition protein smc [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490483|gb|EAO53787.1| Chromosome partition protein smc [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 971 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|326793325|ref|YP_004311145.1| DNA replication and repair protein recF [Marinomonas mediterranea MMB-1] gi|326544089|gb|ADZ89309.1| DNA replication and repair protein recF [Marinomonas mediterranea MMB-1] Length = 366 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSI 87 L ++I+ R T+IQ E + + ++ G+NG GK+S+ EAI L YG + R KH I Sbjct: 3 LARLDIAKLRNLTKIQ-FEPSHQVNVIVGENGSGKTSVLEAIHLLSYGRSFRSHKHKTYI 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|55821982|ref|YP_140424.1| recombination protein F [Streptococcus thermophilus LMG 18311] gi|81676637|sp|Q5M237|RECF_STRT2 RecName: Full=DNA replication and repair protein recF gi|55737967|gb|AAV61609.1| DNA repair and genetic recombination protein [Streptococcus thermophilus LMG 18311] Length = 366 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R Sbjct: 3 LEKIDIQHFRNYSE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHR 53 >gi|15829185|ref|NP_326545.1| ABC transporter ATP-binding protein [Mycoplasma pulmonis UAB CTIP] gi|14090129|emb|CAC13887.1| P115-LIKE (Mycoplasma hyorhinis) ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 979 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 36/61 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ I+ F+ F E ++ F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKIQAHGFKSFAEPIQLSFDGGVAGIIGPNGSGKSNINDAIKWVLGEQSSKSLRGDNM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|299144131|ref|ZP_07037211.1| putative SMC family, C- domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518616|gb|EFI42355.1| putative SMC family, C- domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 1182 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 27/41 (65%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I F+ F + KIEF + +T + G NG GKS++S+A+ W+ Sbjct: 8 IQGFKSFAQKTKIEFNNKITGIVGPNGSGKSNISDAMMWVL 48 >gi|291459098|ref|ZP_06598488.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418352|gb|EFE92071.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 1094 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F +++F+ +T + G NG GKS++S+A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANKTELDFSRGVTGIVGPNGSGKSNISDAVRWVLGEQKIKQLRGASMQ 62 >gi|197303925|ref|ZP_03168957.1| hypothetical protein RUMLAC_02662 [Ruminococcus lactaris ATCC 29176] gi|197296893|gb|EDY31461.1| hypothetical protein RUMLAC_02662 [Ruminococcus lactaris ATCC 29176] Length = 517 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ I+I +FRG+ + KIE D LT+ G+N GKS++ EA++ F Sbjct: 2 KIDSIKIKNFRGYKDETKIELND-LTVFVGKNDIGKSTILEALDIFF 47 >gi|225570732|ref|ZP_03779755.1| hypothetical protein CLOHYLEM_06833 [Clostridium hylemonae DSM 15053] gi|225160475|gb|EEG73094.1| hypothetical protein CLOHYLEM_06833 [Clostridium hylemonae DSM 15053] Length = 195 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFAHKIKFDFHNGITAIVGPNGSGKSNVADAVRWVL 48 >gi|197303072|ref|ZP_03168120.1| hypothetical protein RUMLAC_01799 [Ruminococcus lactaris ATCC 29176] gi|197297927|gb|EDY32479.1| hypothetical protein RUMLAC_01799 [Ruminococcus lactaris ATCC 29176] Length = 1186 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGSMQ 62 >gi|282896236|ref|ZP_06304259.1| RecF protein [Raphidiopsis brookii D9] gi|281198925|gb|EFA73803.1| RecF protein [Raphidiopsis brookii D9] Length = 371 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +E+ +FR + E QK+EF TI+ G N GKS+L E++E L Sbjct: 3 LQSLELRNFRNYQE-QKVEFTAPKTILVGNNAQGKSNLLESVELL 46 >gi|55823899|ref|YP_142340.1| recombination protein F [Streptococcus thermophilus CNRZ1066] gi|116628673|ref|YP_821292.1| recombination protein F [Streptococcus thermophilus LMD-9] gi|81676484|sp|Q5LXI7|RECF_STRT1 RecName: Full=DNA replication and repair protein recF gi|122266733|sp|Q03I76|RECF_STRTD RecName: Full=DNA replication and repair protein recF gi|55739884|gb|AAV63525.1| DNA repair and genetic recombination protein [Streptococcus thermophilus CNRZ1066] gi|116101950|gb|ABJ67096.1| Recombinational DNA repair ATPase (RecF pathway) [Streptococcus thermophilus LMD-9] gi|312279328|gb|ADQ63985.1| DNA replication and repair protein recF [Streptococcus thermophilus ND03] Length = 366 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R Sbjct: 3 LEKIDIQHFRNYSE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHR 53 >gi|325959297|ref|YP_004290763.1| SMC domain-containing protein [Methanobacterium sp. AL-21] gi|325330729|gb|ADZ09791.1| SMC domain protein [Methanobacterium sp. AL-21] Length = 815 Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 12/71 (16%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR------- 80 K+L++EI++FRG + KI A ++ G NG GKS++ +A+++L G R Sbjct: 2 KVLELEITNFRGIKNL-KINPAGKNFMIIGPNGSGKSAVVDAVDFLLTGQISRMTGKGTK 60 Query: 81 ----RKHGDSI 87 +KHG I Sbjct: 61 GINLKKHGPHI 71 >gi|295706310|ref|YP_003599385.1| chromosome segregation protein SMC [Bacillus megaterium DSM 319] gi|294803969|gb|ADF41035.1| chromosome segregation protein SMC [Bacillus megaterium DSM 319] Length = 1186 Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LDIAGFKSFAEKVSIDFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|294500964|ref|YP_003564664.1| chromosome segregation protein SMC [Bacillus megaterium QM B1551] gi|294350901|gb|ADE71230.1| chromosome segregation protein SMC [Bacillus megaterium QM B1551] Length = 1186 Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LDIAGFKSFAEKVSIDFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|222528061|ref|YP_002571943.1| DNA replication and repair protein RecF [Caldicellulosiruptor bescii DSM 6725] gi|222454908|gb|ACM59170.1| DNA replication and repair protein RecF [Caldicellulosiruptor bescii DSM 6725] Length = 353 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I + +FRG+ + + EF D + ++ G N GK+SL EA+ + G + + + D+I Sbjct: 2 KIKSIYVENFRGYKQ-RFFEFKDKMNLIVGNNASGKTSLLEALYFCMCGKSFKSRDIDAI 60 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 S + M V +Y + Sbjct: 61 NFDSFYFKLEMLAEVGDTEYNV 82 >gi|308190055|ref|YP_003922986.1| segregation of chromosomes protein [Mycoplasma fermentans JER] gi|319777349|ref|YP_004137000.1| p115-like abc transporter ATP-binding protein [Mycoplasma fermentans M64] gi|307624797|gb|ADN69102.1| segregation of chromosomes protein [Mycoplasma fermentans JER] gi|318038424|gb|ADV34623.1| P115-Like ABC transporter ATP-Binding Protein [Mycoplasma fermentans M64] Length = 991 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F + ++F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 2 KLIKVEAHGFKSFADPIVLKFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNM 61 Query: 88 KK---RSIKTPMPMCMAV 102 KT PM AV Sbjct: 62 DDVIFAGSKTAKPMDKAV 79 >gi|329896665|ref|ZP_08271658.1| Chromosome partition protein smc [gamma proteobacterium IMCC3088] gi|328921601|gb|EGG28977.1| Chromosome partition protein smc [gamma proteobacterium IMCC3088] Length = 930 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 36/60 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + ++F +++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVQFPHNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|260911970|ref|ZP_05918534.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633917|gb|EEX52043.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 658 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 8/87 (9%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++++ K L + +F+G + I+F + +T ++G+NG GK+++ +A WL +G + + Sbjct: 2 KRIVIKKL--SLVNFKGIRSLT-IDFNEGVTTISGRNGLGKTTIFDAFTWLLFGKDSKER 58 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQL 109 K+ IKT +PR +++ Sbjct: 59 -----KQFGIKTYGKDGKTIPRLPHEV 80 >gi|238809525|dbj|BAH69315.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 1001 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F + ++F + + G NG GKS++++AI+W+ + + GD++ Sbjct: 12 KLIKVEAHGFKSFADPIVLKFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDNM 71 Query: 88 KK---RSIKTPMPMCMAV 102 KT PM AV Sbjct: 72 DDVIFAGSKTAKPMDKAV 89 >gi|88703480|ref|ZP_01101196.1| chromosome segregation SMC protein [Congregibacter litoralis KT71] gi|88702194|gb|EAQ99297.1| chromosome segregation SMC protein [Congregibacter litoralis KT71] Length = 1166 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTAVHFPSNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|312621131|ref|YP_004022744.1| DNA replication and repair protein recf [Caldicellulosiruptor kronotskyensis 2002] gi|312201598|gb|ADQ44925.1| DNA replication and repair protein RecF [Caldicellulosiruptor kronotskyensis 2002] Length = 353 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I + +FRG+ + + EF D + ++ G N GK+SL EA+ + G + + + D+I Sbjct: 2 KIKSIYVENFRGYKQ-RFFEFKDKMNLIVGNNASGKTSLLEALYFCMCGKSFKSRDIDAI 60 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 S + M V +Y + Sbjct: 61 NFDSFYFKLEMLAEVGDTEYNV 82 >gi|11498637|ref|NP_069865.1| chromosome segregation protein [Archaeoglobus fulgidus DSM 4304] gi|18201999|sp|O29230|RAD50_ARCFU RecName: Full=DNA double-strand break repair rad50 ATPase gi|2649562|gb|AAB90211.1| purine NTPase, putative [Archaeoglobus fulgidus DSM 4304] Length = 886 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +++I +FR ++ KIEF + ++ G+NG GKSS+ EAI FYG Sbjct: 4 LKELQIKNFRSHSD-SKIEFDTGINLIAGRNGAGKSSILEAILVAFYG 50 >gi|114570749|ref|YP_757429.1| condensin subunit Smc [Maricaulis maris MCS10] gi|114341211|gb|ABI66491.1| condensin subunit Smc [Maricaulis maris MCS10] Length = 1148 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K + ++ F+ F E ++ LT V G NG GKS+L EA+ W+ + + GD + Sbjct: 2 KFTQLRLAGFKSFVEPTELRIDPGLTGVIGPNGCGKSNLLEALRWVMGATSAKSLRGDGM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|330889910|gb|EGH22571.1| chromosome segregation protein SMC [Pseudomonas syringae pv. mori str. 301020] Length = 119 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|154505347|ref|ZP_02042085.1| hypothetical protein RUMGNA_02862 [Ruminococcus gnavus ATCC 29149] gi|153794390|gb|EDN76810.1| hypothetical protein RUMGNA_02862 [Ruminococcus gnavus ATCC 29149] Length = 1185 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 6 IEVQGFKSFANRIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGSMQ 62 >gi|315611794|ref|ZP_07886716.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] gi|315316209|gb|EFU64239.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] Length = 880 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-S 86 K+ I I +F+ + I+F +++T+ G NG+GK+++ +AIE G +R + D S Sbjct: 2 KIKKILIKNFKNIKGTRIIDFQENVTLFVGPNGFGKTTIFDAIELSLTGKIRRIEESDYS 61 Query: 87 IKKRSIKTP 95 + S TP Sbjct: 62 DGRSSFSTP 70 >gi|17230866|ref|NP_487414.1| recombination protein F [Nostoc sp. PCC 7120] gi|20978593|sp|Q8YRR9|RECF_ANASP RecName: Full=DNA replication and repair protein recF gi|17132469|dbj|BAB75073.1| DNA repair and genetic recombination protein [Nostoc sp. PCC 7120] Length = 376 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + HFR + + QK+EF TI+ G N GKS+L EA+E L Sbjct: 3 LKTLHLRHFRNYYD-QKVEFTAAKTILVGNNAQGKSNLLEAVELL 46 >gi|90416523|ref|ZP_01224454.1| hypothetical protein GB2207_04957 [marine gamma proteobacterium HTCC2207] gi|90331722|gb|EAS46950.1| hypothetical protein GB2207_04957 [marine gamma proteobacterium HTCC2207] Length = 1165 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTSVHFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|254422702|ref|ZP_05036420.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] gi|196190191|gb|EDX85155.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] Length = 921 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++L + +++F+ E Q+ +F + G+NG GK+S+ EAI W+ + Y K D I Sbjct: 2 QILSVALTNFKTHKE-QQFDFQLGTNAICGENGAGKTSILEAIAWVLFNYQGSYKKEDLI 60 Query: 88 K 88 + Sbjct: 61 R 61 >gi|26990687|ref|NP_746112.1| hypothetical protein PP_3982 [Pseudomonas putida KT2440] gi|24985678|gb|AAN69576.1|AE016591_4 hypothetical protein PP_3982 [Pseudomonas putida KT2440] Length = 881 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I FRGF + + L + G NG GK+SL EA+E+ G Sbjct: 86 LSELTIGPFRGFRSPETFDLTKRLILFYGPNGSGKTSLCEALEYALLG 133 >gi|329666209|pdb|3QF7|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair gi|329666210|pdb|3QF7|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair Length = 365 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F G + IEF +T+V G NG GKSSL EAI + +G Sbjct: 6 LTVRNFLGLKNVD-IEFQSGITVVEGPNGAGKSSLFEAISFALFG 49 >gi|313906053|ref|ZP_07839405.1| chromosome segregation protein SMC [Eubacterium cellulosolvens 6] gi|313469098|gb|EFR64448.1| chromosome segregation protein SMC [Eubacterium cellulosolvens 6] Length = 1186 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F K+EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKSIEMQGFKSFAMKTKLEFDNGVTGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|187778955|ref|ZP_02995428.1| hypothetical protein CLOSPO_02550 [Clostridium sporogenes ATCC 15579] gi|187772580|gb|EDU36382.1| hypothetical protein CLOSPO_02550 [Clostridium sporogenes ATCC 15579] Length = 1193 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A++W+ Sbjct: 3 LKSIEIRGFKSFADKTELMFKQGVTAIVGPNGSGKSNISDAVKWVL 48 >gi|329666213|pdb|3QG5|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair gi|329666214|pdb|3QG5|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair Length = 365 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F G + IEF +T+V G NG GKSSL EAI + +G Sbjct: 6 LTVRNFLGLKNVD-IEFQSGITVVEGPNGAGKSSLFEAISFALFG 49 >gi|169350201|ref|ZP_02867139.1| hypothetical protein CLOSPI_00945 [Clostridium spiroforme DSM 1552] gi|169292984|gb|EDS75117.1| hypothetical protein CLOSPI_00945 [Clostridium spiroforme DSM 1552] Length = 981 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + IEF +T + G NG GKS++++AI W+ + + G S+ Sbjct: 6 IELHGFKSFADKVNIEFQPGITGIVGPNGCGKSNVADAIRWVLGEQSVKSLRGSSM 61 >gi|166157052|emb|CAO79509.1| DNA replication and repair protein RecF [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 352 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+L++++++ R T++ I F +++T++ G NG GKS++ EAI L G ++ K+ Sbjct: 2 KILNLKLTNLRNHTKLSLI-FDNNVTLITGDNGSGKSTILEAIHILSVGKSKISKY 56 >gi|319427655|gb|ADV55729.1| SMC domain protein [Shewanella putrefaciens 200] Length = 872 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + + FRGF + + L ++ G NG GKSS EA+E+ G Sbjct: 81 RLKTLTVGPFRGFARQELFDLNSRLVLIYGPNGTGKSSFCEALEYTLLG 129 >gi|331010244|gb|EGH90300.1| hypothetical protein PSYTB_11213 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 777 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++ IE+S F+ F I L ++G NGYGK+S+ +AIE L G R Sbjct: 3 WQISKIEVSSFKAFKHIYLDLGESSLLTLDGPNGYGKTSIFDAIELLLTGQINR 56 >gi|330982947|gb|EGH81050.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 171 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|257486774|ref|ZP_05640815.1| putative RecF/RecN/SMC N domain [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 777 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++ IE+S F+ F I L ++G NGYGK+S+ +AIE L G R Sbjct: 3 WQISKIEVSSFKAFKHIYLDLGESSLLTLDGPNGYGKTSIFDAIELLLTGQINR 56 >gi|254283161|ref|ZP_04958129.1| chromosome segregation protein SMC [gamma proteobacterium NOR51-B] gi|219679364|gb|EED35713.1| chromosome segregation protein SMC [gamma proteobacterium NOR51-B] Length = 1166 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKTIQLAGFKSFVDPTTVSFPSNMSAVVGPNGCGKSNVIDAVRWVMGESSAKTLRGESM 61 >gi|254514183|ref|ZP_05126244.1| chromosome segregation protein SMC [gamma proteobacterium NOR5-3] gi|219676426|gb|EED32791.1| chromosome segregation protein SMC [gamma proteobacterium NOR5-3] Length = 1166 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTAVHFPTNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|78222390|ref|YP_384137.1| condensin subunit Smc [Geobacter metallireducens GS-15] gi|78193645|gb|ABB31412.1| condensin subunit Smc [Geobacter metallireducens GS-15] Length = 1176 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ ++IS F+ F + ++F +T + G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KIKRLDISGFKSFVDKVSLDFQQGITSIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|291550078|emb|CBL26340.1| condensin subunit Smc [Ruminococcus torques L2-14] Length = 1186 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|255262668|ref|ZP_05342010.1| DNA replication and repair protein RecF [Thalassiobium sp. R2A62] gi|255105003|gb|EET47677.1| DNA replication and repair protein RecF [Thalassiobium sp. R2A62] Length = 368 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ ISHFR + +E + G NG GK++L EAI L G RR + Sbjct: 4 LRLSELTISHFRSHKRV-ALEIDARPVAIYGANGVGKTNLIEAISLLSPGRGLRRSSAED 62 Query: 87 IKKR 90 I +R Sbjct: 63 ITRR 66 >gi|13096783|pdb|1E69|A Chain A, Smc Head Domain From Thermotoga Maritima gi|13096784|pdb|1E69|B Chain B, Smc Head Domain From Thermotoga Maritima gi|13096785|pdb|1E69|C Chain C, Smc Head Domain From Thermotoga Maritima gi|13096786|pdb|1E69|D Chain D, Smc Head Domain From Thermotoga Maritima gi|13096787|pdb|1E69|E Chain E, Smc Head Domain From Thermotoga Maritima gi|13096788|pdb|1E69|F Chain F, Smc Head Domain From Thermotoga Maritima Length = 322 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F I F+D +T + G NG GKS++ +AI+W+F Sbjct: 11 FKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVF 48 >gi|87121027|ref|ZP_01076919.1| recombination protein F [Marinomonas sp. MED121] gi|86163865|gb|EAQ65138.1| recombination protein F [Marinomonas sp. MED121] Length = 375 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSI 87 L ++IS R +++Q + + H+ +++G NG GK+S+ EAI L G + R KH I Sbjct: 3 LQRLDISQLRNLSKVQ-FKPSPHVNLISGANGSGKTSILEAIHLLSLGRSFRSHKHKTYI 61 Query: 88 KKRS 91 +K + Sbjct: 62 QKET 65 >gi|295086014|emb|CBK67537.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length = 717 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +I I +F+ + E Q +EF+ L ++ G G GKS L A W+ +G Sbjct: 5 NITIENFQSYYESQTMEFSKGLNLIIGNGGKGKSKLFNAFYWVLFG 50 >gi|167756879|ref|ZP_02429006.1| hypothetical protein CLORAM_02428 [Clostridium ramosum DSM 1402] gi|167703054|gb|EDS17633.1| hypothetical protein CLORAM_02428 [Clostridium ramosum DSM 1402] Length = 981 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + +EF +T + G NG GKS++S+A+ W+ Sbjct: 6 IELHGFKSFADKVNVEFQPGITGIVGPNGCGKSNISDAVRWVL 48 >gi|56693118|ref|YP_164705.1| hypothetical protein LP65_gp070 [Lactobacillus phage LP65] gi|54633619|gb|AAV35890.1| orf70 [Lactobacillus phage LP65] Length = 638 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 3/61 (4%) Query: 30 LDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E R F I+ ++F + LT+++G+NG GKSS+ AI + + TQ+ + D+ Sbjct: 1 MKLETIKIRNFRSIRSLDFKIDSRGLTLISGKNGQGKSSIYAAILYALFNKTQKGQTADA 60 Query: 87 I 87 I Sbjct: 61 I 61 >gi|86609420|ref|YP_478182.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557962|gb|ABD02919.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1205 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +R+LI ++L + + +F+ E F + + G+NG GK+S+ EAI W+ + Y Sbjct: 3 SRRLIMRILSLALQNFKSH-EDAVFTFEPGINAICGENGAGKTSILEAIAWVLFDY 57 >gi|75909597|ref|YP_323893.1| recombination protein F [Anabaena variabilis ATCC 29413] gi|97180310|sp|Q3M7N8|RECF_ANAVT RecName: Full=DNA replication and repair protein recF gi|75703322|gb|ABA22998.1| DNA replication and repair protein RecF [Anabaena variabilis ATCC 29413] Length = 376 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + HFR + + QK+EF TI+ G N GKS+L EA+E L Sbjct: 3 LKTLHLRHFRNYYD-QKVEFTAAKTILVGNNAQGKSNLLEAVELL 46 >gi|325860349|ref|ZP_08173468.1| hypothetical protein HMPREF9303_0079 [Prevotella denticola CRIS 18C-A] gi|325482143|gb|EGC85157.1| hypothetical protein HMPREF9303_0079 [Prevotella denticola CRIS 18C-A] Length = 83 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 31 DIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +I I +FR + + IE LT++ G NG GK++ EA++WLF T++ + Sbjct: 5 EIRIKNFRSYYGDNNHIEVTPGLTLILGDNGDGKTTFFEALQWLFNTTTEKGNLDPHVGN 64 Query: 90 RSIK 93 IK Sbjct: 65 AKIK 68 >gi|255281053|ref|ZP_05345608.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] gi|255268501|gb|EET61706.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] Length = 713 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ + ++ G +++ Sbjct: 3 LKSIEVQGFKSFANKMKFQFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGANMQ 62 >gi|84489889|ref|YP_448121.1| DNA double-strand break repair protein Rad50 [Methanosphaera stadtmanae DSM 3091] gi|84373208|gb|ABC57478.1| DNA double-strand break repair protein Rad50 [Methanosphaera stadtmanae DSM 3091] Length = 902 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK- 89 +IE+++F+ KIEF ++++ G+NG GKSS+ EAI + F+ K ++I+K Sbjct: 5 NIELTNFKSHKST-KIEFKKGISLILGENGAGKSSILEAISYAFFKQV-NGKLEENIRKP 62 Query: 90 ---RSIKTPMPMCM 100 + I M +C+ Sbjct: 63 QNRKDIVDKMEVCV 76 >gi|269115245|ref|YP_003303008.1| ABC transporter ATP-binding protein [Mycoplasma hominis] gi|268322870|emb|CAX37605.1| P115-like (Mycoplasma hyorhinis) ABCtransporter ATP-binding protein [Mycoplasma hominis ATCC 23114] Length = 978 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F + ++F + + G NG GKS++++AI W+ + + GD++ Sbjct: 2 KLIQVEAHGFKSFADKVTLKFDGGIVAIIGPNGSGKSNINDAIRWVLGETSSKVLRGDTM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|331701484|ref|YP_004398443.1| chromosome segregation protein SMC [Lactobacillus buchneri NRRL B-30929] gi|329128827|gb|AEB73380.1| chromosome segregation protein SMC [Lactobacillus buchneri NRRL B-30929] Length = 1183 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L IEI F+ F + I+F +T + G NG GKS+++E+I W+ Sbjct: 2 QLKSIEIIGFKSFADKTLIKFPGGMTGIVGPNGSGKSNIAESIRWV 47 >gi|146296604|ref|YP_001180375.1| SMC domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410180|gb|ABP67184.1| SMC domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 857 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Query: 32 IEISHFRGFTE-IQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++I +F+ + E +I+F + + + G+NG GKSS++EAI W +G +R + G Sbjct: 6 LKIENFKSYGENFNEIDFKNIKVACIVGKNGNGKSSIAEAITWALFGEFERLQTG 60 >gi|330508914|ref|YP_004385342.1| hypothetical protein MCON_3242 [Methanosaeta concilii GP-6] gi|328929722|gb|AEB69524.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 1059 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Query: 37 FRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F + ++ IEF + LT + G NG GKS++ EAI W YG Sbjct: 8 LRNFKKYRRATIEFQEGLTGIIGSNGSGKSTIVEAIAWALYG 49 >gi|237734589|ref|ZP_04565070.1| chromosome segregation ATPase [Mollicutes bacterium D7] gi|229382409|gb|EEO32500.1| chromosome segregation ATPase [Coprobacillus sp. D7] Length = 981 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + +EF +T + G NG GKS++S+A+ W+ Sbjct: 6 IELHGFKSFADKVNVEFQPGITGIVGPNGCGKSNISDAVRWVL 48 >gi|224541341|ref|ZP_03681880.1| hypothetical protein CATMIT_00501 [Catenibacterium mitsuokai DSM 15897] gi|224525778|gb|EEF94883.1| hypothetical protein CATMIT_00501 [Catenibacterium mitsuokai DSM 15897] Length = 978 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + +EF +T + G NG GKS++++AI W+ + + G+++ Sbjct: 6 IELHGFKSFADKSVVEFMPGITGIVGPNGCGKSNITDAIRWVLGEKSAKAMRGETM 61 >gi|154686010|ref|YP_001421171.1| hypothetical protein RBAM_015770 [Bacillus amyloliquefaciens FZB42] gi|154351861|gb|ABS73940.1| Smc [Bacillus amyloliquefaciens FZB42] Length = 1186 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGKME 62 >gi|162452485|ref|YP_001614852.1| hypothetical protein sce4209 [Sorangium cellulosum 'So ce 56'] gi|161163067|emb|CAN94372.1| hypothetical protein sce4209 [Sorangium cellulosum 'So ce 56'] Length = 418 Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 27/45 (60%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + KL + I FRG ++ F+D L ++ GQNG GK++L E I Sbjct: 1 MLKLRRLRIEKFRGVAPGTELRFSDGLNVLLGQNGTGKTTLLELI 45 >gi|308173557|ref|YP_003920262.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens DSM 7] gi|307606421|emb|CBI42792.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens DSM 7] Length = 1186 Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGKME 62 >gi|331007039|ref|ZP_08330272.1| Chromosome partition protein smc [gamma proteobacterium IMCC1989] gi|330419149|gb|EGG93582.1| Chromosome partition protein smc [gamma proteobacterium IMCC1989] Length = 1168 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|328553510|gb|AEB24002.1| chromosome partition protein SMC [Bacillus amyloliquefaciens TA208] gi|328911698|gb|AEB63294.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens LL3] Length = 1186 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGKME 62 >gi|189485480|ref|YP_001956421.1| hypothetical protein TGRD_477 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287439|dbj|BAG13960.1| conserved hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 807 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++ IS RG ++ ++ G+NG GKSS+++AIEWL+ Sbjct: 4 KINNLTISGIRGIQNTINLQLNGKSILLYGENGSGKSSITDAIEWLY 50 >gi|153853252|ref|ZP_01994661.1| hypothetical protein DORLON_00646 [Dorea longicatena DSM 13814] gi|149754038|gb|EDM63969.1| hypothetical protein DORLON_00646 [Dorea longicatena DSM 13814] Length = 1186 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|325265085|ref|ZP_08131812.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] gi|324029775|gb|EGB91063.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] Length = 1186 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|255655260|ref|ZP_05400669.1| chromosome partition protein [Clostridium difficile QCD-23m63] gi|296451245|ref|ZP_06892985.1| chromosome segregation protein Smc [Clostridium difficile NAP08] gi|296880403|ref|ZP_06904366.1| chromosome segregation protein Smc [Clostridium difficile NAP07] gi|296259851|gb|EFH06706.1| chromosome segregation protein Smc [Clostridium difficile NAP08] gi|296428644|gb|EFH14528.1| chromosome segregation protein Smc [Clostridium difficile NAP07] Length = 1184 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 6 LELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVI 65 Query: 90 ---RSIKTPMPMC 99 K PM C Sbjct: 66 FAGTDTKKPMNYC 78 >gi|254974794|ref|ZP_05271266.1| chromosome partition protein [Clostridium difficile QCD-66c26] gi|255092182|ref|ZP_05321660.1| chromosome partition protein [Clostridium difficile CIP 107932] gi|255313921|ref|ZP_05355504.1| chromosome partition protein [Clostridium difficile QCD-76w55] gi|255516600|ref|ZP_05384276.1| chromosome partition protein [Clostridium difficile QCD-97b34] gi|255649700|ref|ZP_05396602.1| chromosome partition protein [Clostridium difficile QCD-37x79] gi|260682856|ref|YP_003214141.1| chromosome partition protein [Clostridium difficile CD196] gi|260686454|ref|YP_003217587.1| chromosome partition protein [Clostridium difficile R20291] gi|260209019|emb|CBA62112.1| chromosome partition protein [Clostridium difficile CD196] gi|260212470|emb|CBE03375.1| chromosome partition protein [Clostridium difficile R20291] Length = 1184 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 6 LELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVI 65 Query: 90 ---RSIKTPMPMC 99 K PM C Sbjct: 66 FAGTDTKKPMNYC 78 >gi|71894686|ref|YP_278794.1| putative ABC transporter ATP-binding protein P115-like [Mycoplasma synoviae 53] gi|71851474|gb|AAZ44083.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma synoviae 53] Length = 980 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ IE F+ F + ++F + + G NG GKS++++AI+W+ + + G+S+ Sbjct: 2 KLIKIEAHGFKSFADPISLKFDGGVIAIIGPNGSGKSNINDAIKWVLGEQSSKELRGNSM 61 >gi|332874201|ref|ZP_08442124.1| hypothetical protein HMPREF0022_01737 [Acinetobacter baumannii 6014059] gi|332737623|gb|EGJ68527.1| hypothetical protein HMPREF0022_01737 [Acinetobacter baumannii 6014059] Length = 349 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I +L I+++HFRG I+ I D LT++ G+NG KS++ I +F Sbjct: 5 ITQLKKIKVNHFRGLKNIE-INLGDRLTVICGKNGTSKSTILGMIAQIF 52 >gi|255100266|ref|ZP_05329243.1| chromosome partition protein [Clostridium difficile QCD-63q42] Length = 1184 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 6 LELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVI 65 Query: 90 ---RSIKTPMPMC 99 K PM C Sbjct: 66 FAGTDTKKPMNYC 78 >gi|298370129|ref|ZP_06981445.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281589|gb|EFI23078.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon 014 str. F0314] Length = 1161 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+++ Sbjct: 2 RLSHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGENM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|221633719|ref|YP_002522945.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] gi|221155554|gb|ACM04681.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] Length = 1187 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKHG 84 +LL + + F+ F + ++ F +T + G NG GKS+L+EAI W+ G R + Sbjct: 4 RLLRLALLGFKSFADPVELVFDRGITAIVGPNGSGKSNLAEAIAWVLGEQAGSAVRSRRA 63 Query: 85 DSI 87 D + Sbjct: 64 DDV 66 >gi|300854471|ref|YP_003779455.1| putative chromosome segregation protein [Clostridium ljungdahlii DSM 13528] gi|300434586|gb|ADK14353.1| predicted chromosome segregation protein [Clostridium ljungdahlii DSM 13528] Length = 1187 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +IEI F+ F + ++ F +T + G NG GKS++S+AI+W+ Sbjct: 3 LKNIEIRGFKSFADKTELIFKGGVTSIVGPNGSGKSNISDAIKWVL 48 >gi|255306206|ref|ZP_05350378.1| chromosome partition protein [Clostridium difficile ATCC 43255] Length = 1184 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 6 LELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVI 65 Query: 90 ---RSIKTPMPMC 99 K PM C Sbjct: 66 FAGTDTKKPMNYC 78 >gi|126698846|ref|YP_001087743.1| chromosome partition protein [Clostridium difficile 630] gi|115250283|emb|CAJ68105.1| Structural maintenance chromosome protein SMC [Clostridium difficile] Length = 1184 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD ++ Sbjct: 6 LELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVI 65 Query: 90 ---RSIKTPMPMC 99 K PM C Sbjct: 66 FAGTDTKKPMNYC 78 >gi|307297606|ref|ZP_07577412.1| chromosome segregation protein SMC [Thermotogales bacterium mesG1.Ag.4.2] gi|306916866|gb|EFN47248.1| chromosome segregation protein SMC [Thermotogales bacterium mesG1.Ag.4.2] Length = 1174 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L + I F+ F + E + +T V G NG GKS++ +AI W+F + + D Sbjct: 1 MLRLNSVYIKGFKSFAMPTRFEVSSGMTAVVGPNGSGKSNVVDAIRWIFGEQSMKNIRAD 60 Query: 86 S 86 S Sbjct: 61 S 61 >gi|220915826|ref|YP_002491130.1| chromosome segregation protein SMC [Anaeromyxobacter dehalogenans 2CP-1] gi|219953680|gb|ACL64064.1| chromosome segregation protein SMC [Anaeromyxobacter dehalogenans 2CP-1] Length = 1199 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I F+ F + I F D +T V G NG GKS+++++I W+ + R G S++ Sbjct: 6 LDIVGFKSFMDKTVIAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRSME 62 >gi|154151724|ref|YP_001405342.1| chromosome segregation protein SMC [Candidatus Methanoregula boonei 6A8] gi|154000276|gb|ABS56699.1| chromosome segregation protein SMC [Methanoregula boonei 6A8] Length = 1146 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 30/42 (71%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++EI +F+ F++ KI F + T+++G NG GKS++ ++I Sbjct: 3 ITELEIDNFKSFSKKTKIPFLEGFTVISGPNGSGKSNIIDSI 44 >gi|197121125|ref|YP_002133076.1| chromosome segregation protein SMC [Anaeromyxobacter sp. K] gi|196170974|gb|ACG71947.1| chromosome segregation protein SMC [Anaeromyxobacter sp. K] Length = 1199 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I F+ F + I F D +T V G NG GKS+++++I W+ + R G S++ Sbjct: 6 LDIVGFKSFMDKTVIAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRSME 62 >gi|149277412|ref|ZP_01883553.1| hypothetical protein PBAL39_04473 [Pedobacter sp. BAL39] gi|149231645|gb|EDM37023.1| hypothetical protein PBAL39_04473 [Pedobacter sp. BAL39] Length = 849 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Query: 31 DIEISHFRGFTEI------QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 DI++S T + QK+ FAD+LT++ G+NG GK+ ++ L + Y Q+ Sbjct: 78 DIKLSSLSNITGVNRLAKNQKMTFADNLTVIYGENGTGKTGYGRILKSLGFSYEQQ 133 >gi|322373988|ref|ZP_08048522.1| DNA replication and repair protein RecF [Streptococcus sp. C150] gi|321276954|gb|EFX54025.1| DNA replication and repair protein RecF [Streptococcus sp. C150] Length = 367 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 15/87 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR------- 81 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R Sbjct: 3 LEKIDIQHFRNYSE-AYVTFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELI 61 Query: 82 -------KHGDSIKKRSIKTPMPMCMA 101 K ++ +RS K P+ + ++ Sbjct: 62 QFQQSTLKLSGTVHRRSGKLPLEISLS 88 >gi|227506185|ref|ZP_03936234.1| recombination protein F [Corynebacterium striatum ATCC 6940] gi|227197209|gb|EEI77257.1| recombination protein F [Corynebacterium striatum ATCC 6940] Length = 392 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 ++++ FR + E+ IE +T+ G+NGYGK+++ EAI ++ + + R H + ++ Sbjct: 5 ELDVRDFRSWPELS-IELGPGITLFVGRNGYGKTNIVEAIGYVAHLSSHRVSHDAPLVRQ 63 Query: 91 S 91 S Sbjct: 64 S 64 >gi|55823212|ref|YP_141653.1| chromosome segregation SMC protein [Streptococcus thermophilus CNRZ1066] gi|55739197|gb|AAV62838.1| chromosome segregation SMC protein [Streptococcus thermophilus CNRZ1066] Length = 1177 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|331700399|ref|YP_004397358.1| DNA replication and repair protein recF [Lactobacillus buchneri NRRL B-30929] gi|329127742|gb|AEB72295.1| DNA replication and repair protein recF [Lactobacillus buchneri NRRL B-30929] Length = 372 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL +IE+ +FR + + Q +EF+D + + G+N GK++L EAI Sbjct: 2 KLTEIELHNFRNYVD-QTLEFSDGINVFLGENAQGKTNLLEAI 43 >gi|170718431|ref|YP_001783358.1| recombination protein F [Haemophilus somnus 2336] gi|189039626|sp|B0UUM0|RECF_HAES2 RecName: Full=DNA replication and repair protein recF gi|168826560|gb|ACA31931.1| DNA replication and repair protein RecF [Haemophilus somnus 2336] Length = 358 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+HFR T I +EF + G NG GK+SL EAI +L +G R ++ R I Sbjct: 8 INHFRNLTAI-DLEFERGFNFIIGNNGSGKTSLLEAIFYLGHG----RSFKSAVANRIIS 62 Query: 94 TPMP 97 P Sbjct: 63 YQQP 66 >gi|113460284|ref|YP_718343.1| recombination protein F [Haemophilus somnus 129PT] gi|123327073|sp|Q0I0Y5|RECF_HAES1 RecName: Full=DNA replication and repair protein recF gi|112822327|gb|ABI24416.1| DNA replication and repair protein RecF [Haemophilus somnus 129PT] Length = 358 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+HFR T I +EF + G NG GK+SL EAI +L +G R ++ R I Sbjct: 8 INHFRNLTAI-DLEFERGFNFIIGNNGSGKTSLLEAIFYLGHG----RSFKSAVANRIIS 62 Query: 94 TPMP 97 P Sbjct: 63 YQQP 66 >gi|330502844|ref|YP_004379713.1| condensin subunit Smc [Pseudomonas mendocina NK-01] gi|328917130|gb|AEB57961.1| condensin subunit Smc [Pseudomonas mendocina NK-01] Length = 1162 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|297617463|ref|YP_003702622.1| chromosome segregation protein SMC [Syntrophothermus lipocalidus DSM 12680] gi|297145300|gb|ADI02057.1| chromosome segregation protein SMC [Syntrophothermus lipocalidus DSM 12680] Length = 1193 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 26/41 (63%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +E+ F+ F E +IEF + ++ G NG GKS++ +AI W Sbjct: 6 LELKGFKSFAERTEIEFMPGVNVIVGPNGCGKSNIVDAIRW 46 >gi|283457879|ref|YP_003362479.1| chromosome segregation ATPase [Rothia mucilaginosa DY-18] gi|283133894|dbj|BAI64659.1| chromosome segregation ATPase [Rothia mucilaginosa DY-18] Length = 1120 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 34/71 (47%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 TS A + + L+ + + F+ F EF + V G NG GKS++ +A+ W+ Sbjct: 10 TSSSAERPLVHLMSLTLRGFKSFASATTFEFTPGINAVVGPNGSGKSNVLDALAWVMGEQ 69 Query: 78 TQRRKHGDSIK 88 + G S+K Sbjct: 70 GAKSLRGGSMK 80 >gi|300771867|ref|ZP_07081738.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761253|gb|EFK58078.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1180 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +EI F+ F + I F D +T + G NG GKS++ +AI W+ Sbjct: 2 QLTKLEIKGFKSFGDKITINFNDGVTAIVGPNGCGKSNVVDAIRWV 47 >gi|227540141|ref|ZP_03970190.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240002|gb|EEI90017.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33300] Length = 1180 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +EI F+ F + I F D +T + G NG GKS++ +AI W+ Sbjct: 2 QLTKLEIKGFKSFGDKITINFNDGVTAIVGPNGCGKSNVVDAIRWV 47 >gi|219851998|ref|YP_002466430.1| hypothetical protein Mpal_1376 [Methanosphaerula palustris E1-9c] gi|219546257|gb|ACL16707.1| hypothetical protein Mpal_1376 [Methanosphaerula palustris E1-9c] Length = 663 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I IS++R + IQ ++ + +++++ G+NG GKS+L AI W YG + Sbjct: 3 YAISSISISNYRQYYGIQTLDIKNDKIKNVSLILGKNGAGKSNLLNAITWCLYGIETHKS 62 Query: 83 HGDSIKKRSIKTPMPM 98 K S T MP+ Sbjct: 63 -----KDISDSTGMPI 73 >gi|283781388|ref|YP_003372143.1| SMC domain-containing protein [Pirellula staleyi DSM 6068] gi|283439841|gb|ADB18283.1| SMC domain protein [Pirellula staleyi DSM 6068] Length = 1275 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 31/55 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ +IEI F +T ++ E T++ G N GKS+L + + YG+T +R+ Sbjct: 2 KIQEIEIDGFGAWTNLKLQELGGDATVIYGPNEAGKSTLLHFVRTVIYGFTPQRR 56 >gi|187250824|ref|YP_001875306.1| chromosome segregation ATPase [Elusimicrobium minutum Pei191] gi|186970984|gb|ACC97969.1| Chromosome segregation ATPase [Elusimicrobium minutum Pei191] Length = 1148 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 27/41 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 IEI F+ F + Q+++F +T V G NG GKS++ +++ W Sbjct: 6 IEIIGFKSFADRQRLDFEKGITCVVGPNGCGKSNVVDSVRW 46 >gi|55821299|ref|YP_139741.1| chromosome segregation SMC protein [Streptococcus thermophilus LMG 18311] gi|55737284|gb|AAV60926.1| chromosome segregation SMC protein [Streptococcus thermophilus LMG 18311] Length = 1177 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|332655291|ref|ZP_08421031.1| SMC family, C- domain protein [Ruminococcaceae bacterium D16] gi|332515796|gb|EGJ45406.1| SMC family, C- domain protein [Ruminococcaceae bacterium D16] Length = 1193 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F + + F +T + G NG GKS++S+AI W+ + R G ++ Sbjct: 9 LEIQGFKSFPDKTVLTFGSDITAIVGPNGSGKSNISDAIRWVMGEQSTRVLRGGKME 65 >gi|146282218|ref|YP_001172371.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] gi|145570423|gb|ABP79529.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] Length = 1162 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|116628031|ref|YP_820650.1| chromosome segregation SMC protein [Streptococcus thermophilus LMD-9] gi|116101308|gb|ABJ66454.1| condensin subunit Smc [Streptococcus thermophilus LMD-9] gi|312278627|gb|ADQ63284.1| Condensin subunit Smc [Streptococcus thermophilus ND03] Length = 1177 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|291288119|ref|YP_003504935.1| chromosome segregation protein SMC [Denitrovibrio acetiphilus DSM 12809] gi|290885279|gb|ADD68979.1| chromosome segregation protein SMC [Denitrovibrio acetiphilus DSM 12809] Length = 1111 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K + + F+ F + IEF +T V G NG GKS++ +AI W+F Sbjct: 2 KFKSLVVQGFKSFVDKTVIEFPGGITCVIGPNGSGKSNILDAIRWIF 48 >gi|172040967|ref|YP_001800681.1| ABC transport system, ATPase component [Corynebacterium urealyticum DSM 7109] gi|171852271|emb|CAQ05247.1| ABC transport system, ATPase component [Corynebacterium urealyticum DSM 7109] Length = 248 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEW-LFYGYTQRRKHGDSIKKRSIKTPMPMC 99 ++EF+ +T+++G+NG GKS+L EA+ L +G T R D K+ S T P+ Sbjct: 37 RLEFSSPVTVLSGENGVGKSTLLEALALKLGFGATGGRLD-DPFKQASTGTESPLV 91 >gi|170759730|ref|YP_001787764.1| chromosome segregation protein SMC [Clostridium botulinum A3 str. Loch Maree] gi|169406719|gb|ACA55130.1| chromosome segregation protein SMC [Clostridium botulinum A3 str. Loch Maree] Length = 1193 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|116049471|ref|YP_791726.1| putative chromosome segregation protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115584692|gb|ABJ10707.1| putative chromosome segregation protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 1162 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|226945099|ref|YP_002800172.1| chromosome segregation protein SMC [Azotobacter vinelandii DJ] gi|226720026|gb|ACO79197.1| chromosome segregation protein SMC [Azotobacter vinelandii DJ] Length = 1162 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|311694086|gb|ADP96959.1| protein containing RecF/RecN/SMC protein, N-terminal domain [marine bacterium HP15] Length = 686 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 13 LSKSLTSYY-ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L +S+ Y +LI KL + +S+FR F + D +T + G+NG GK++ EA+ Sbjct: 33 LPQSIKRYKDGLELIMKLHTMRLSNFRSFGQTPTTILLDDITYLIGRNGSGKTAALEALC 92 Query: 72 WLF-YGYTQRR 81 LF + QRR Sbjct: 93 RLFAFDPAQRR 103 >gi|89098684|ref|ZP_01171566.1| Smc [Bacillus sp. NRRL B-14911] gi|89086646|gb|EAR65765.1| Smc [Bacillus sp. NRRL B-14911] Length = 1188 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I+ F+ F E ++F +T V G NG GKS+++++I W+ Sbjct: 6 LDIAGFKSFAEKSSVDFVPGVTAVVGPNGSGKSNITDSIRWVL 48 >gi|147919561|ref|YP_686699.1| chromosome segregation/partition protein [uncultured methanogenic archaeon RC-I] gi|110622095|emb|CAJ37373.1| chromosome segregation/partition protein [uncultured methanogenic archaeon RC-I] Length = 1173 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 27/40 (67%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +IE+S+F+ F K+ F D T ++G NG GKS++ ++I Sbjct: 5 EIELSNFKSFARKVKVPFYDDFTTISGPNGSGKSNIIDSI 44 >gi|327480470|gb|AEA83780.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri DSM 4166] Length = 1162 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|224826989|ref|ZP_03700087.1| chromosome segregation protein SMC [Lutiella nitroferrum 2002] gi|224600822|gb|EEG07007.1| chromosome segregation protein SMC [Lutiella nitroferrum 2002] Length = 1161 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLSGFKSFVDPTAIPVPGQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|146307770|ref|YP_001188235.1| condensin subunit Smc [Pseudomonas mendocina ymp] gi|145575971|gb|ABP85503.1| condensin subunit Smc [Pseudomonas mendocina ymp] Length = 1162 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|107100958|ref|ZP_01364876.1| hypothetical protein PaerPA_01001988 [Pseudomonas aeruginosa PACS2] Length = 1162 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|116754779|ref|YP_843897.1| SMC domain-containing protein [Methanosaeta thermophila PT] gi|116666230|gb|ABK15257.1| SMC domain protein [Methanosaeta thermophila PT] Length = 1061 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 37 FRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 R F + ++ I F D LT + G NG GKS++ EAI W YG R + ++KR IK Sbjct: 8 LRNFKKYRRADITFQDGLTGIIGGNGAGKSTIVEAIAWALYG--SRAYTVEKLEKRLIK 64 >gi|254239876|ref|ZP_04933198.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126193254|gb|EAZ57317.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 1162 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|291544314|emb|CBL17423.1| chromosome segregation protein SMC, common bacterial type [Ruminococcus sp. 18P13] Length = 1188 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + K+ F LT V G NG GKS++ +A+ W+ + + G+ ++ Sbjct: 3 LKSLELQGFKSFPDKIKLSFDKGLTAVVGPNGSGKSNIGDAVRWVLGEQSTKTLRGNKME 62 >gi|291530281|emb|CBK95866.1| chromosome segregation protein SMC, common bacterial type [Eubacterium siraeum 70/3] Length = 1192 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD ++ Sbjct: 6 MEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDKME 62 >gi|218778640|ref|YP_002429958.1| chromosome segregation protein SMC [Desulfatibacillum alkenivorans AK-01] gi|218760024|gb|ACL02490.1| chromosome segregation protein SMC [Desulfatibacillum alkenivorans AK-01] Length = 1191 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL +E+ F+ F + I F ++ V G NG GKS++ +AI+W+ R+ G S+ Sbjct: 2 KLKQLELCGFKSFPDKTTIPFPGGVSAVVGPNGCGKSNIVDAIQWVTGEQRARQLRGKSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|153938415|ref|YP_001391750.1| chromosome segregation protein SMC [Clostridium botulinum F str. Langeland] gi|152934311|gb|ABS39809.1| chromosome segregation protein SMC [Clostridium botulinum F str. Langeland] Length = 1193 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|152985977|ref|YP_001349160.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PA7] gi|150961135|gb|ABR83160.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PA7] Length = 1162 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|218892515|ref|YP_002441384.1| putative chromosome segregation protein [Pseudomonas aeruginosa LESB58] gi|254234622|ref|ZP_04927945.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126166553|gb|EAZ52064.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218772743|emb|CAW28528.1| putative chromosome segregation protein [Pseudomonas aeruginosa LESB58] Length = 1162 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|313106531|ref|ZP_07792760.1| putative chromosome segregation protein [Pseudomonas aeruginosa 39016] gi|310879262|gb|EFQ37856.1| putative chromosome segregation protein [Pseudomonas aeruginosa 39016] Length = 1162 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|294788255|ref|ZP_06753498.1| putative RecF/RecN/SMC N domain protein [Simonsiella muelleri ATCC 29453] gi|294483686|gb|EFG31370.1| putative RecF/RecN/SMC N domain protein [Simonsiella muelleri ATCC 29453] Length = 1159 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+++ Sbjct: 2 RLTHIKLAGFKSFTDPTTIHVPSQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGENM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|262276826|ref|ZP_06054619.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114] gi|262223929|gb|EEY74388.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114] Length = 809 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 K +IE+S F+ F + F LT + G NG GKS++ EA+ W Sbjct: 2 KFKEIEVSGFKSFADKTNFYFEKGLTGIVGPNGCGKSNVVEALRW 46 >gi|170756367|ref|YP_001781995.1| chromosome segregation protein SMC [Clostridium botulinum B1 str. Okra] gi|169121579|gb|ACA45415.1| chromosome segregation protein SMC [Clostridium botulinum B1 str. Okra] Length = 1193 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|15596724|ref|NP_250218.1| hypothetical protein PA1527 [Pseudomonas aeruginosa PAO1] gi|9947485|gb|AAG04916.1|AE004581_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 1162 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|28379016|ref|NP_785908.1| prophage Lp2 protein 4 [Lactobacillus plantarum WCFS1] gi|28271854|emb|CAD64759.1| prophage Lp2 protein 4 [Lactobacillus plantarum WCFS1] Length = 582 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Query: 29 LLD-IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L+D I+I+ FR F+E+ +I+ +T+++G NG GKSS+ I Sbjct: 4 LIDKIKINKFRKFSELGQIQLGHRITVLSGHNGVGKSSIMSLI 46 >gi|296390106|ref|ZP_06879581.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PAb1] Length = 1162 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|168180667|ref|ZP_02615331.1| chromosome segregation protein SMC [Clostridium botulinum NCTC 2916] gi|226949805|ref|YP_002804896.1| chromosome segregation protein SMC [Clostridium botulinum A2 str. Kyoto] gi|182668486|gb|EDT80465.1| chromosome segregation protein SMC [Clostridium botulinum NCTC 2916] gi|226844084|gb|ACO86750.1| chromosome segregation protein SMC [Clostridium botulinum A2 str. Kyoto] Length = 1193 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|152994046|ref|YP_001338881.1| recombination protein F [Marinomonas sp. MWYL1] gi|189039628|sp|A6VR67|RECF_MARMS RecName: Full=DNA replication and repair protein recF gi|150834970|gb|ABR68946.1| DNA replication and repair protein RecF [Marinomonas sp. MWYL1] Length = 368 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSI 87 L+ ++ISH R + + + E + + ++ G+NG GK+S+ EAI L +G + R KH I Sbjct: 3 LVRLDISHVRNLSSV-RFEPSPQVNVIVGKNGSGKTSVLEAIHLLSFGRSFRSHKHKTYI 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|167754401|ref|ZP_02426528.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] gi|167659026|gb|EDS03156.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] Length = 661 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +I + +F+G + +EF LT + G+NG GK+S+ + WL +G K+ + K+ Sbjct: 8 EIRLLNFKGLRNLT-VEFDPALTEIYGRNGIGKTSIFDGFTWLLFG-----KNSEDRKQF 61 Query: 91 SIKTPMPMCMAVPRCKYQL 109 IKT +P+ +++ Sbjct: 62 GIKTYDEAGNIIPKLPHEV 80 >gi|160947484|ref|ZP_02094651.1| hypothetical protein PEPMIC_01418 [Parvimonas micra ATCC 33270] gi|158446618|gb|EDP23613.1| hypothetical protein PEPMIC_01418 [Parvimonas micra ATCC 33270] Length = 511 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++I++FRG+ + I+F D LT++ G+N GKS++ EA++ F Sbjct: 2 KITSMKINNFRGYNKEINIKF-DDLTVIVGKNDVGKSTILEALDIFF 47 >gi|307826051|ref|ZP_07656264.1| chromosome segregation protein SMC [Methylobacter tundripaludum SV96] gi|307732890|gb|EFO03754.1| chromosome segregation protein SMC [Methylobacter tundripaludum SV96] Length = 1196 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I++S F+ F + I + +LT + G NG GKS++ +A+ W+ + + G S+ Sbjct: 2 KLEKIKLSGFKSFVDSTVIPISGNLTAIVGPNGCGKSNIIDAVRWVMGESSAKHLRGGSM 61 >gi|299483502|gb|ADJ19583.1| SMC domain-containing protein [Treponema primitia ZAS-2] Length = 887 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ ++EI FRGFT + F T + G NG GKSS E +E+ G Sbjct: 84 RIYELEIGPFRGFTSQEHFIFDKKYTFLYGPNGSGKSSFCEGLEYALLG 132 >gi|228992576|ref|ZP_04152503.1| Chromosome partition protein smc [Bacillus pseudomycoides DSM 12442] gi|228767210|gb|EEM15846.1| Chromosome partition protein smc [Bacillus pseudomycoides DSM 12442] Length = 1189 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIVGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|254519216|ref|ZP_05131272.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] gi|226912965|gb|EEH98166.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] Length = 1187 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +++F +T V G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTQLKFKKGVTAVVGPNGSGKSNISDSVRWVL 48 >gi|219854637|ref|YP_002471759.1| hypothetical protein CKR_1294 [Clostridium kluyveri NBRC 12016] gi|219568361|dbj|BAH06345.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 1185 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 8 IEIKGFKSFADKTELIFTGGITSIVGPNGSGKSNISDAVRWVL 50 >gi|167751474|ref|ZP_02423601.1| hypothetical protein EUBSIR_02470 [Eubacterium siraeum DSM 15702] gi|167655282|gb|EDR99411.1| hypothetical protein EUBSIR_02470 [Eubacterium siraeum DSM 15702] Length = 1192 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD ++ Sbjct: 6 MEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDKME 62 >gi|320334437|ref|YP_004171148.1| SMC domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755726|gb|ADV67483.1| SMC domain protein [Deinococcus maricopensis DSM 21211] Length = 1095 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 I + F+ F + ++EF +T V G NG GKS++ EAI W Sbjct: 5 ITLQGFKSFADRVRLEFGPGVTAVIGPNGSGKSNVVEAIRW 45 >gi|291557096|emb|CBL34213.1| chromosome segregation protein SMC, common bacterial type [Eubacterium siraeum V10Sc8a] Length = 1192 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD ++ Sbjct: 6 MEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDKME 62 >gi|229918602|ref|YP_002887248.1| chromosome segregation protein SMC [Exiguobacterium sp. AT1b] gi|229470031|gb|ACQ71803.1| chromosome segregation protein SMC [Exiguobacterium sp. AT1b] Length = 1185 Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 29/43 (67%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE++ F+ F + +++F +T V G NG GKS++S+A+ W+ Sbjct: 6 IELAGFKSFAKRIELDFRPGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|226953498|ref|ZP_03823962.1| chromosome segregation ATPase [Acinetobacter sp. ATCC 27244] gi|226835783|gb|EEH68166.1| chromosome segregation ATPase [Acinetobacter sp. ATCC 27244] Length = 1152 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|168184658|ref|ZP_02619322.1| chromosome segregation protein SMC [Clostridium botulinum Bf] gi|182672317|gb|EDT84278.1| chromosome segregation protein SMC [Clostridium botulinum Bf] Length = 1193 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|148380410|ref|YP_001254951.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 3502] gi|148289894|emb|CAL84002.1| chromosome partition protein Smc [Clostridium botulinum A str. ATCC 3502] Length = 1193 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|153954023|ref|YP_001394788.1| hypothetical protein CKL_1398 [Clostridium kluyveri DSM 555] gi|146346904|gb|EDK33440.1| Hypothetical protein CKL_1398 [Clostridium kluyveri DSM 555] Length = 1183 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 6 IEIKGFKSFADKTELIFTGGITSIVGPNGSGKSNISDAVRWVL 48 >gi|298480017|ref|ZP_06998216.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298273826|gb|EFI15388.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 653 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL + + +F+G + I F+D T+V G+NG GK+++ ++ WL +G + G S Sbjct: 5 KLKSLSLVNFKGIRSLN-IGFSDAETLVAGENGTGKTTVFDSFLWLLFG---KDSTGRSD 60 Query: 88 KKRSIKT 94 +IKT Sbjct: 61 SNFNIKT 67 >gi|257485004|ref|ZP_05639045.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 205 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|228998624|ref|ZP_04158211.1| Chromosome partition protein smc [Bacillus mycoides Rock3-17] gi|229006124|ref|ZP_04163812.1| Chromosome partition protein smc [Bacillus mycoides Rock1-4] gi|228755200|gb|EEM04557.1| Chromosome partition protein smc [Bacillus mycoides Rock1-4] gi|228761092|gb|EEM10051.1| Chromosome partition protein smc [Bacillus mycoides Rock3-17] Length = 1189 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LEIVGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVL 48 >gi|226355769|ref|YP_002785509.1| chromosome partition protein [Deinococcus deserti VCD115] gi|226317759|gb|ACO45755.1| putative chromosome partition protein [Deinococcus deserti VCD115] Length = 1096 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 27/45 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + F+ F + ++EF ++ V G NG GKS++ EAI W+ Sbjct: 2 LHSITLQGFKSFADRTRLEFGPGVSAVIGPNGSGKSNVVEAIRWV 46 >gi|160934420|ref|ZP_02081807.1| hypothetical protein CLOLEP_03293 [Clostridium leptum DSM 753] gi|156867093|gb|EDO60465.1| hypothetical protein CLOLEP_03293 [Clostridium leptum DSM 753] Length = 1190 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +++ F+ F + K+ F +T V G NG GKS++S+AI W+ Sbjct: 3 LKSLKLQGFKTFPDQTKLSFGPGITAVVGPNGSGKSNISDAIRWVL 48 >gi|157273413|gb|ABV27312.1| chromosome segregation protein SMC [Candidatus Chloracidobacterium thermophilum] Length = 1261 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L +E+ F+ F + +I F +T + G NG GKS++ +AI W+ + R G Sbjct: 1 MLRLEKLELRGFKSFCDTTEILFHPGVTAIVGPNGCGKSNIVDAITWVLGEQSARNLRGS 60 Query: 86 SIK 88 ++ Sbjct: 61 KME 63 >gi|91773238|ref|YP_565930.1| hypothetical protein Mbur_1259 [Methanococcoides burtonii DSM 6242] gi|91712253|gb|ABE52180.1| ATPase domain-like membrane protein [Methanococcoides burtonii DSM 6242] Length = 1280 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 32/56 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ D+ I F F + + + LT+++G+N GKS+L I +F+G+ +R + Sbjct: 2 RITDLNIDGFGKFNDFSINDLGEGLTVLHGENEAGKSTLLSFIRRMFFGFPDKRSN 57 >gi|322806717|emb|CBZ04286.1| chromosome partition protein smc [Clostridium botulinum H04402 065] Length = 1193 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|290559280|gb|EFD92617.1| chromosome segregation protein SMC [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 56 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 31/50 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 IE+ +F+ F K+ F + + G NG GKS++ +A+ ++F G +++R Sbjct: 7 IELENFKSFAGRTKLSFINGFNAIAGANGSGKSNVIDALLFVFGGSSKKR 56 >gi|167763836|ref|ZP_02435963.1| hypothetical protein BACSTE_02216 [Bacteroides stercoris ATCC 43183] gi|167697952|gb|EDS14531.1| hypothetical protein BACSTE_02216 [Bacteroides stercoris ATCC 43183] Length = 653 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL + + +F+G + I F+D T+V G+NG GK+++ ++ WL +G + G S Sbjct: 5 KLKSLSLVNFKGIRSLN-IGFSDAETLVAGENGTGKTTVFDSFLWLLFG---KDSTGRSD 60 Query: 88 KKRSIKT 94 +IKT Sbjct: 61 SNFNIKT 67 >gi|153931137|ref|YP_001384627.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 19397] gi|153936718|ref|YP_001388144.1| chromosome segregation protein SMC [Clostridium botulinum A str. Hall] gi|152927181|gb|ABS32681.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 19397] gi|152932632|gb|ABS38131.1| chromosome segregation protein SMC [Clostridium botulinum A str. Hall] Length = 1193 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|237667209|ref|ZP_04527193.1| gp49 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655557|gb|EEP53113.1| gp49 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 656 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 IEF + LT + G+NG GKS++ +A W+ +G Sbjct: 19 IEFGNELTTIAGENGTGKSTIMDAFMWVLFG 49 >gi|114328528|ref|YP_745685.1| chromosome partition protein smc [Granulibacter bethesdensis CGDNIH1] gi|114316702|gb|ABI62762.1| chromosome partition protein smc [Granulibacter bethesdensis CGDNIH1] Length = 1523 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + I+ F+ F + Q IE LT V G NG GKS++ EA+ W Sbjct: 8 LRIAGFKSFADPQSIEILPGLTGVVGPNGCGKSNVVEALRW 48 >gi|182417298|ref|ZP_02948641.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|182378859|gb|EDT76376.1| conserved hypothetical protein [Clostridium butyricum 5521] Length = 656 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 IEF + LT + G+NG GKS++ +A W+ +G Sbjct: 19 IEFGNELTTIAGENGTGKSTIMDAFMWVLFG 49 >gi|163848467|ref|YP_001636511.1| chromosome segregation protein SMC [Chloroflexus aurantiacus J-10-fl] gi|222526396|ref|YP_002570867.1| chromosome segregation protein SMC [Chloroflexus sp. Y-400-fl] gi|163669756|gb|ABY36122.1| chromosome segregation protein SMC [Chloroflexus aurantiacus J-10-fl] gi|222450275|gb|ACM54541.1| chromosome segregation protein SMC [Chloroflexus sp. Y-400-fl] Length = 1186 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 25/43 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F EF +T V G NG GKS+L++A+ W+ Sbjct: 6 LEIQGFKTFATRTVFEFQPGITAVVGPNGSGKSNLADAVRWVL 48 >gi|327441089|dbj|BAK17454.1| chromosome segregation ATPase [Solibacillus silvestris StLB046] Length = 1193 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LEVVGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVL 48 >gi|297184344|gb|ADI20461.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L43F08] Length = 1151 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTELTIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|317129237|ref|YP_004095519.1| chromosome segregation protein SMC [Bacillus cellulosilyticus DSM 2522] gi|315474185|gb|ADU30788.1| chromosome segregation protein SMC [Bacillus cellulosilyticus DSM 2522] Length = 1189 Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F E I+F +T V G NG GKS++S+AI W+ Sbjct: 6 LDLVGFKSFAERLSIDFVKGVTAVVGPNGSGKSNISDAIRWVL 48 >gi|293609094|ref|ZP_06691397.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829667|gb|EFF88029.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 1149 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|149173803|ref|ZP_01852432.1| chromosome segregation SMC protein [Planctomyces maris DSM 8797] gi|148847333|gb|EDL61667.1| chromosome segregation SMC protein [Planctomyces maris DSM 8797] Length = 1307 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + EF+D +T V G NG GKS++ + I+W+ Sbjct: 2 LKSLELFGFKSFADRTIFEFSDGITCVVGPNGSGKSNVVDGIKWVL 47 >gi|329667083|gb|AEB93031.1| chromosome partitioning protein Smc [Lactobacillus johnsonii DPC 6026] Length = 1186 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|325121131|gb|ADY80654.1| putative chromosome segregation ATPase [Acinetobacter calcoaceticus PHEA-2] Length = 1149 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|296328619|ref|ZP_06871136.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154218|gb|EFG95019.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 602 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 KL +++ +FRG+ E +EF ++LT G+N GKS++ EA+E F T Sbjct: 2 KLKQLKLKNFRGYKEENYVEF-ENLTAFVGKNDVGKSTILEALEIFFNNKT 51 >gi|42519392|ref|NP_965322.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC 533] gi|41583680|gb|AAS09288.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC 533] Length = 1186 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|188590228|ref|YP_001920587.1| chromosome segregation protein SMC [Clostridium botulinum E3 str. Alaska E43] gi|188500509|gb|ACD53645.1| chromosome segregation protein SMC [Clostridium botulinum E3 str. Alaska E43] Length = 1185 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|261493354|ref|ZP_05989880.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496620|ref|ZP_05993000.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307823|gb|EEY09146.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310998|gb|EEY12175.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 372 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 T + R L L + I+HFR + F+ H + G NG GK+SL E+I +L +G Sbjct: 3 TLFIPRTLTMALTRLLINHFRNIQHTD-LAFSPHFNFLVGANGSGKTSLLESIFYLGHG 60 >gi|251780518|ref|ZP_04823438.1| chromosome segregation protein SMC [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084833|gb|EES50723.1| chromosome segregation protein SMC [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1185 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|169827095|ref|YP_001697253.1| chromosome partition protein smc [Lysinibacillus sphaericus C3-41] gi|168991583|gb|ACA39123.1| Chromosome partition protein smc [Lysinibacillus sphaericus C3-41] Length = 1191 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVL 48 >gi|83647419|ref|YP_435854.1| chromosome segregation protein SMC [Hahella chejuensis KCTC 2396] gi|83635462|gb|ABC31429.1| chromosome segregation protein SMC [Hahella chejuensis KCTC 2396] Length = 1162 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVHFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGESM 61 >gi|124485832|ref|YP_001030448.1| condensin subunit Smc [Methanocorpusculum labreanum Z] gi|124363373|gb|ABN07181.1| condensin subunit Smc [Methanocorpusculum labreanum Z] Length = 1149 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 33/52 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ ++I +F+ F+ KI F + T+++G NG GKS++ ++I ++ T R Sbjct: 3 IVQVDIDNFKSFSRKTKIPFYEGFTVISGPNGSGKSNIIDSILFVLSLSTSR 54 >gi|154249899|ref|YP_001410724.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1] gi|154153835|gb|ABS61067.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1] Length = 1164 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +I I F+ F E ++E ++ +T + G NG GKS++ +AI W+ Sbjct: 3 LKEIFIKGFKSFAEPVRLEISNRVTAIVGPNGSGKSNVVDAIRWVL 48 >gi|104782596|ref|YP_609094.1| hypothetical protein PSEEN3569 [Pseudomonas entomophila L48] gi|95111583|emb|CAK16303.1| hypothetical protein PSEEN3569 [Pseudomonas entomophila L48] Length = 608 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I I +FR ++E I D TI+ G+N GKSS+ EA+E F T + GD+ Sbjct: 2 RLKTIAIKNFRCYSEKVTIPIEDLTTII-GKNDIGKSSILEALEIFFNNETITIEQGDA 59 >gi|299536777|ref|ZP_07050085.1| chromosome partition protein smc [Lysinibacillus fusiformis ZC1] gi|298727789|gb|EFI68356.1| chromosome partition protein smc [Lysinibacillus fusiformis ZC1] Length = 1193 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVL 48 >gi|266623887|ref|ZP_06116822.1| putative cell division protein Smc [Clostridium hathewayi DSM 13479] gi|288864300|gb|EFC96598.1| putative cell division protein Smc [Clostridium hathewayi DSM 13479] Length = 1193 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +I L IEI F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 6 VIMYLKSIEIQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVL 55 >gi|297566459|ref|YP_003685431.1| SMC domain-containing protein [Meiothermus silvanus DSM 9946] gi|296850908|gb|ADH63923.1| SMC domain protein [Meiothermus silvanus DSM 9946] Length = 1080 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-----RS 91 F+ F E +EF +T + G NG GKS+L EA+ W+ G R G+ + Sbjct: 11 FKSFGERTVLEFGSGVTGIVGPNGSGKSNLVEALRWVV-GAKPRELRGEEAQALLFHGSD 69 Query: 92 IKTPMPMCMAV 102 + PMP V Sbjct: 70 ARAPMPFAEVV 80 >gi|227890257|ref|ZP_04008062.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC 33200] gi|227849071|gb|EEJ59157.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC 33200] Length = 1186 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|206890767|ref|YP_002249782.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742705|gb|ACI21762.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 1148 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 33/58 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 IE++ F+ F E KIE + +T G NG GKS++ +A W+ + R G+ +++ Sbjct: 6 IELNGFKSFPERTKIELNEGITCFVGPNGAGKSNIIDAFRWVLGEHNPRILRGEKMEE 63 >gi|116629438|ref|YP_814610.1| chromosome segregation ATPase [Lactobacillus gasseri ATCC 33323] gi|282850852|ref|ZP_06260226.1| chromosome segregation protein SMC [Lactobacillus gasseri 224-1] gi|311110914|ref|ZP_07712311.1| cell division protein Smc [Lactobacillus gasseri MV-22] gi|116095020|gb|ABJ60172.1| condensin subunit Smc [Lactobacillus gasseri ATCC 33323] gi|282557804|gb|EFB63392.1| chromosome segregation protein SMC [Lactobacillus gasseri 224-1] gi|311066068|gb|EFQ46408.1| cell division protein Smc [Lactobacillus gasseri MV-22] Length = 1186 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|330832995|ref|YP_004401820.1| chromosome partition protein [Streptococcus suis ST3] gi|329307218|gb|AEB81634.1| chromosome partition protein [Streptococcus suis ST3] Length = 1177 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|262373319|ref|ZP_06066598.1| chromosome segregation protein SMC [Acinetobacter junii SH205] gi|262313344|gb|EEY94429.1| chromosome segregation protein SMC [Acinetobacter junii SH205] Length = 1149 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|157130497|ref|XP_001661899.1| DNA repair protein rad50 [Aedes aegypti] gi|108871897|gb|EAT36122.1| DNA repair protein rad50 [Aedes aegypti] Length = 284 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 7/51 (13%) Query: 32 IEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +EI R F ++QKI+F LT++ GQNG GK+++ IE L YG T Sbjct: 7 LEIRGIRSFGVESGDVQKIKFQSPLTLIVGQNGCGKTTI---IECLKYGLT 54 >gi|223932806|ref|ZP_03624803.1| chromosome segregation protein SMC [Streptococcus suis 89/1591] gi|302023943|ref|ZP_07249154.1| chromosome segregation protein SMC [Streptococcus suis 05HAS68] gi|223898515|gb|EEF64879.1| chromosome segregation protein SMC [Streptococcus suis 89/1591] Length = 1177 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|268319231|ref|YP_003292887.1| chromosome partitioning protein Smc [Lactobacillus johnsonii FI9785] gi|262397606|emb|CAX66620.1| chromosome partitioning protein Smc [Lactobacillus johnsonii FI9785] Length = 1186 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|255027332|ref|ZP_05299318.1| putative RecF/RecN/SMC N domain [Listeria monocytogenes FSL J2-003] Length = 339 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 F++ +I I + R T + F D LTI++G NGYGK++ +AIE LF G Q Sbjct: 3 FRIENISICNLRSITSENPL-FIDLNSSLLTILDGPNGYGKTTFFDAIELLFTGNIQ 58 >gi|253755370|ref|YP_003028510.1| chromosome partition protein [Streptococcus suis BM407] gi|251817834|emb|CAZ55587.1| putative chromosome partition protein [Streptococcus suis BM407] Length = 1177 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|238852588|ref|ZP_04642998.1| chromosome segregation protein SMC [Lactobacillus gasseri 202-4] gi|238834734|gb|EEQ26961.1| chromosome segregation protein SMC [Lactobacillus gasseri 202-4] Length = 1186 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|187933092|ref|YP_001885440.1| chromosome segregation protein SMC [Clostridium botulinum B str. Eklund 17B] gi|187721245|gb|ACD22466.1| chromosome segregation protein SMC [Clostridium botulinum B str. Eklund 17B] Length = 1185 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVL 48 >gi|146318844|ref|YP_001198556.1| chromosome segregation ATPase [Streptococcus suis 05ZYH33] gi|146321054|ref|YP_001200765.1| chromosome segregation ATPase [Streptococcus suis 98HAH33] gi|253751929|ref|YP_003025070.1| chromosome partition protein [Streptococcus suis SC84] gi|253753752|ref|YP_003026893.1| chromosome partition protein [Streptococcus suis P1/7] gi|145689650|gb|ABP90156.1| Chromosome segregation ATPase [Streptococcus suis 05ZYH33] gi|145691860|gb|ABP92365.1| Chromosome segregation ATPase [Streptococcus suis 98HAH33] gi|251816218|emb|CAZ51845.1| putative chromosome partition protein [Streptococcus suis SC84] gi|251819998|emb|CAR46158.1| putative chromosome partition protein [Streptococcus suis P1/7] gi|292558505|gb|ADE31506.1| SMC protein [Streptococcus suis GZ1] gi|319758291|gb|ADV70233.1| chromosome segregation ATPase [Streptococcus suis JS14] Length = 1177 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRW 46 >gi|238022149|ref|ZP_04602575.1| hypothetical protein GCWU000324_02055 [Kingella oralis ATCC 51147] gi|237866763|gb|EEP67805.1| hypothetical protein GCWU000324_02055 [Kingella oralis ATCC 51147] Length = 1160 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTQIKLAGFKSFIDPTTIHVPSQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|282858458|ref|ZP_06267637.1| putative DNA sulfur modification protein DndD [Prevotella bivia JCVIHMP010] gi|282588774|gb|EFB93900.1| putative DNA sulfur modification protein DndD [Prevotella bivia JCVIHMP010] Length = 704 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 4/50 (8%) Query: 31 DIEISHFRGFTEIQKIE-FAD---HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +IE+++FR + KIE F D +L IV+G NG+GK++ ++ W YG Sbjct: 5 EIELNNFRIYKGKNKIELFPDGNRNLIIVSGNNGFGKTTFLMSLVWCLYG 54 >gi|294084668|ref|YP_003551426.1| chromosome segregation ATPase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664241|gb|ADE39342.1| Chromosome segregation ATPase [Candidatus Puniceispirillum marinum IMCC1322] Length = 1132 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ F+ F E+ ++E LT + G NG GKS++ E + W+ + R+ G Sbjct: 1 MAGFKSFAEVAEVEIESGLTGIVGPNGCGKSNVVEGLRWVMGESSARQMRG 51 >gi|154150482|ref|YP_001404100.1| SMC domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999034|gb|ABS55457.1| SMC domain protein [Methanoregula boonei 6A8] Length = 812 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +E+++F+ F ++ I+F D +T + G NG GKSSL AI + YG Sbjct: 6 LELTNFKRFRHVE-IKFQDGITGILGNNGTGKSSLVTAIFFALYG 49 >gi|90021524|ref|YP_527351.1| condensin subunit Smc [Saccharophagus degradans 2-40] gi|89951124|gb|ABD81139.1| condensin subunit Smc [Saccharophagus degradans 2-40] Length = 1168 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNLCSVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|291546253|emb|CBL19361.1| condensin subunit Smc [Ruminococcus sp. SR1/5] Length = 1086 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKNIEVQGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|260555697|ref|ZP_05827917.1| chromosome segregation protein SMC [Acinetobacter baumannii ATCC 19606] gi|260410608|gb|EEX03906.1| chromosome segregation protein SMC [Acinetobacter baumannii ATCC 19606] Length = 1149 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|269926523|ref|YP_003323146.1| chromosome segregation protein SMC [Thermobaculum terrenum ATCC BAA-798] gi|269790183|gb|ACZ42324.1| chromosome segregation protein SMC [Thermobaculum terrenum ATCC BAA-798] Length = 1181 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKH 83 K+ ++I F+ F+ +EF +T + G NG GKS++ EAI W+ Y + +K Sbjct: 2 KINSLKIQGFKSFSNHTLLEFDHGITAIVGPNGSGKSNILEAIRWVLGEQSYSLLRSKKS 61 Query: 84 GDSIKKRSIKTP 95 D I S P Sbjct: 62 EDVIWAGSPGKP 73 >gi|322506975|gb|ADX02429.1| Putative chromosome segregation ATPase [Acinetobacter baumannii 1656-2] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|299771369|ref|YP_003733395.1| chromosome segregation protein SMC [Acinetobacter sp. DR1] gi|298701457|gb|ADI92022.1| chromosome segregation protein SMC [Acinetobacter sp. DR1] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|260550984|ref|ZP_05825189.1| chromosome segregation protein SMC [Acinetobacter sp. RUH2624] gi|260405932|gb|EEW99419.1| chromosome segregation protein SMC [Acinetobacter sp. RUH2624] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|238790539|ref|ZP_04634306.1| Predicted ATP-binding protein involved in virulence [Yersinia frederiksenii ATCC 33641] gi|238721336|gb|EEQ13009.1| Predicted ATP-binding protein involved in virulence [Yersinia frederiksenii ATCC 33641] Length = 541 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EW---LFYGYTQ 79 F L +++ +++GF E+ I + + ++ NGYGK+ + EAI W L YG Q Sbjct: 57 FCLKKVKLVNYKGFNELS-INLDNDIILIAANNGYGKTGILEAIYLSLSWFYRLVYGSNQ 115 Query: 80 RRKHGD 85 K GD Sbjct: 116 GWKFGD 121 >gi|193076576|gb|ABO11235.2| putative chromosome segregation ATPase [Acinetobacter baumannii ATCC 17978] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|184157076|ref|YP_001845415.1| chromosome segregation ATPase [Acinetobacter baumannii ACICU] gi|332872652|ref|ZP_08440620.1| segregation protein SMC [Acinetobacter baumannii 6014059] gi|183208670|gb|ACC56068.1| Chromosome segregation ATPase [Acinetobacter baumannii ACICU] gi|323516842|gb|ADX91223.1| chromosome segregation ATPase [Acinetobacter baumannii TCDC-AB0715] gi|332739181|gb|EGJ70040.1| segregation protein SMC [Acinetobacter baumannii 6014059] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|169634134|ref|YP_001707870.1| putative chromosome segregation ATPases [Acinetobacter baumannii SDF] gi|169152926|emb|CAP01967.1| putative chromosome segregation ATPases [Acinetobacter baumannii] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|169797011|ref|YP_001714804.1| putative chromosome segregation ATPases [Acinetobacter baumannii AYE] gi|213156585|ref|YP_002318246.1| chromosome segregation protein SMC [Acinetobacter baumannii AB0057] gi|215484471|ref|YP_002326706.1| chromosome segregation protein SMC [Acinetobacter baumannii AB307-0294] gi|301347732|ref|ZP_07228473.1| chromosome segregation protein SMC [Acinetobacter baumannii AB056] gi|301512480|ref|ZP_07237717.1| chromosome segregation protein SMC [Acinetobacter baumannii AB058] gi|301594388|ref|ZP_07239396.1| chromosome segregation protein SMC [Acinetobacter baumannii AB059] gi|332852099|ref|ZP_08433926.1| segregation protein SMC [Acinetobacter baumannii 6013150] gi|332867497|ref|ZP_08437650.1| segregation protein SMC [Acinetobacter baumannii 6013113] gi|169149938|emb|CAM87832.1| putative chromosome segregation ATPases [Acinetobacter baumannii AYE] gi|213055745|gb|ACJ40647.1| chromosome segregation protein SMC [Acinetobacter baumannii AB0057] gi|213988534|gb|ACJ58833.1| chromosome segregation protein SMC [Acinetobacter baumannii AB307-0294] gi|332729471|gb|EGJ60810.1| segregation protein SMC [Acinetobacter baumannii 6013150] gi|332733914|gb|EGJ65059.1| segregation protein SMC [Acinetobacter baumannii 6013113] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|283779090|ref|YP_003369845.1| chromosome segregation protein SMC [Pirellula staleyi DSM 6068] gi|283437543|gb|ADB15985.1| chromosome segregation protein SMC [Pirellula staleyi DSM 6068] Length = 1215 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F + + EF +T++ G NG GKS++ + I+W+ Sbjct: 5 LELHGFKSFADKTRFEFPAGITVIVGPNGSGKSNIVDGIKWVL 47 >gi|262280097|ref|ZP_06057882.1| chromosome segregation ATPase [Acinetobacter calcoaceticus RUH2202] gi|262260448|gb|EEY79181.1| chromosome segregation ATPase [Acinetobacter calcoaceticus RUH2202] Length = 1149 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|229815432|ref|ZP_04445764.1| hypothetical protein COLINT_02480 [Collinsella intestinalis DSM 13280] gi|229808965|gb|EEP44735.1| hypothetical protein COLINT_02480 [Collinsella intestinalis DSM 13280] Length = 1178 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + + F LT++ G NG GKS++S+AI W+ + ++ G +++ Sbjct: 3 LKSLTLKGFKSFADRAHMTFEPGLTVIVGPNGSGKSNVSDAILWVLGEQSAKQLRGQAME 62 >gi|126654292|ref|ZP_01726069.1| Smc [Bacillus sp. B14905] gi|126589256|gb|EAZ83417.1| Smc [Bacillus sp. B14905] Length = 1191 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E I+F +T V G NG GKS++++AI W+ Sbjct: 6 LEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVL 48 >gi|16329963|ref|NP_440691.1| chromosome segregation protein SMC1 [Synechocystis sp. PCC 6803] gi|1652449|dbj|BAA17371.1| chromosome segregation protein SMC1 [Synechocystis sp. PCC 6803] Length = 1200 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|239501243|ref|ZP_04660553.1| chromosome segregation ATPase [Acinetobacter baumannii AB900] Length = 1149 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|254480602|ref|ZP_05093849.1| chromosome segregation protein SMC [marine gamma proteobacterium HTCC2148] gi|214039185|gb|EEB79845.1| chromosome segregation protein SMC [marine gamma proteobacterium HTCC2148] Length = 1165 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNVIDAVRWVMGESSAKNLRGESM 61 >gi|270307914|ref|YP_003329972.1| DNA repair ATPase [Dehalococcoides sp. VS] gi|270153806|gb|ACZ61644.1| ATPase involved in DNA repair [Dehalococcoides sp. VS] Length = 859 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 30/59 (50%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 H + GQNG GKS+L +AI W +G ++ + D + +T + + + YQ+ Sbjct: 27 HTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVVSLNEQETEVSLDFEISGELYQV 85 >gi|114319840|ref|YP_741523.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] gi|114226234|gb|ABI56033.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] Length = 1168 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + ++ L V G NG GKS++ +A+ W+ + R G S+ Sbjct: 2 RLKKIKLSGFKSFVDPTQVAMPGDLVAVVGPNGCGKSNIIDAVRWVMGESSARHLRGQSM 61 >gi|290986805|ref|XP_002676114.1| predicted protein [Naegleria gruberi] gi|284089714|gb|EFC43370.1| predicted protein [Naegleria gruberi] Length = 105 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 27/44 (61%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 K+EF D TI++G+NG GKS++ AI+ + G+SIK Sbjct: 19 KVEFHDRTTIIHGENGSGKSAVLTAIQVGLGSKAKNTNRGNSIK 62 >gi|86157102|ref|YP_463887.1| condensin subunit Smc [Anaeromyxobacter dehalogenans 2CP-C] gi|85773613|gb|ABC80450.1| condensin subunit Smc [Anaeromyxobacter dehalogenans 2CP-C] Length = 1199 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I F+ F + + F D +T V G NG GKS+++++I W+ + R G S++ Sbjct: 6 LDIVGFKSFMDKTVVAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRSME 62 >gi|300765830|ref|ZP_07075804.1| hypothetical protein LMHG_12470 [Listeria monocytogenes FSL N1-017] gi|300513407|gb|EFK40480.1| hypothetical protein LMHG_12470 [Listeria monocytogenes FSL N1-017] Length = 647 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KLL +++ +F+G E++ I+F D+ +I G N GK+++ +A WL + K +I Sbjct: 5 KLLKLQLENFKGIKELE-IDFQDNTSIY-GANASGKTTILDAFTWLLFDKDSTNKKDFAI 62 Query: 88 K 88 K Sbjct: 63 K 63 >gi|300361932|ref|ZP_07058109.1| chromosome segregation protein Smc [Lactobacillus gasseri JV-V03] gi|300354551|gb|EFJ70422.1| chromosome segregation protein Smc [Lactobacillus gasseri JV-V03] Length = 1186 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G+++K Sbjct: 3 LQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGENMK 62 >gi|157325333|ref|YP_001468753.1| gp49 [Listeria phage B054] gi|66733338|gb|AAY53154.1| gp49 [Listeria phage B054] Length = 647 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KLL +++ +F+G E++ I+F D+ +I G N GK+++ +A WL + K +I Sbjct: 5 KLLKLQLENFKGIKELE-IDFQDNTSIY-GANASGKTTILDAFTWLLFDKDSTNKKDFAI 62 Query: 88 K 88 K Sbjct: 63 K 63 >gi|326777766|ref|ZP_08237031.1| SMC domain protein [Streptomyces cf. griseus XylebKG-1] gi|326658099|gb|EGE42945.1| SMC domain protein [Streptomyces cf. griseus XylebKG-1] Length = 814 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 LT+V G NG GKSSL+EA E G+ R + K+R++ Sbjct: 77 LTVVTGGNGTGKSSLAEAAEIALTGFNARWDGSNGGKRRAV 117 >gi|294649512|ref|ZP_06726933.1| chromosome segregation ATPase [Acinetobacter haemolyticus ATCC 19194] gi|292824573|gb|EFF83355.1| chromosome segregation ATPase [Acinetobacter haemolyticus ATCC 19194] Length = 858 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|254435753|ref|ZP_05049260.1| hypothetical protein NOC27_2816 [Nitrosococcus oceani AFC27] gi|207088864|gb|EDZ66136.1| hypothetical protein NOC27_2816 [Nitrosococcus oceani AFC27] Length = 168 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + + +FR ++ + ++F D+ ++ G+N GKS++ EA+E F T + + GD Sbjct: 2 KISSLTLKNFRAYSNVF-VKFDDNFNVIIGRNDVGKSTILEALEIFFNNETVKMEIGD 58 >gi|15895028|ref|NP_348377.1| chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum ATCC 824] gi|15024720|gb|AAK79717.1|AE007684_5 Chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum ATCC 824] gi|325509165|gb|ADZ20801.1| Chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum EA 2018] Length = 1191 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + + F + +T V G NG GKS++S+A+ W+ Sbjct: 3 LKSIEIRGFKSFADKTDLIFKNGITAVVGPNGSGKSNISDAVLWVL 48 >gi|302335831|ref|YP_003801038.1| condensin subunit Smc [Olsenella uli DSM 7084] gi|301319671|gb|ADK68158.1| condensin subunit Smc [Olsenella uli DSM 7084] Length = 1177 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + ++ F LT+V G NG GKS++S+AI W+ + + G +++ Sbjct: 3 LKSLTLRGFKSFADKTQMAFDPGLTVVVGPNGSGKSNISDAILWVLGEQSAKMLRGQAME 62 >gi|297623774|ref|YP_003705208.1| SMC domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164954|gb|ADI14665.1| SMC domain protein [Truepera radiovictrix DSM 17093] Length = 1131 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 27/45 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +L + + F+ F + +EF + +T + G NG GKS+L +A+ W Sbjct: 2 RLTSLTLQGFKSFADRTTLEFTEGVTAIVGPNGSGKSNLIDALRW 46 >gi|227890690|ref|ZP_04008495.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus salivarius ATCC 11741] gi|227867628|gb|EEJ75049.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus salivarius ATCC 11741] Length = 1178 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ Sbjct: 2 KIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVL 48 >gi|302670932|ref|YP_003830892.1| chromosome segregation protein Smc [Butyrivibrio proteoclasticus B316] gi|302395405|gb|ADL34310.1| chromosome segregation protein Smc [Butyrivibrio proteoclasticus B316] Length = 1185 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F K +F + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIHGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGSMQ 62 >gi|301299299|ref|ZP_07205585.1| chromosome segregation protein SMC [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853143|gb|EFK80741.1| chromosome segregation protein SMC [Lactobacillus salivarius ACS-116-V-Col5a] Length = 1178 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ Sbjct: 2 KIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVL 48 >gi|90961603|ref|YP_535519.1| chromosome partition protein [Lactobacillus salivarius UCC118] gi|90820797|gb|ABD99436.1| Chromosome partition protein [Lactobacillus salivarius UCC118] Length = 1178 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ Sbjct: 2 KIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVL 48 >gi|300769156|ref|ZP_07079044.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493185|gb|EFK28365.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 827 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ ++ +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 1 MMMQIKRLEIAGFGKFQQ-QQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 56 >gi|257059354|ref|YP_003137242.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] gi|256589520|gb|ACV00407.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] Length = 1226 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTSIPFLTGFTVVSGPNGSGKSNILDAL 45 >gi|254883810|ref|ZP_05256520.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|319641515|ref|ZP_07996204.1| hypothetical protein HMPREF9011_01802 [Bacteroides sp. 3_1_40A] gi|254836603|gb|EET16912.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|317386871|gb|EFV67761.1| hypothetical protein HMPREF9011_01802 [Bacteroides sp. 3_1_40A] Length = 285 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I I++FR + E + LT++ G NG GK++ EA+EWL Sbjct: 6 IVITNFRSYYGENTFELSKGLTLIIGGNGDGKTTFFEALEWLL 48 >gi|159899159|ref|YP_001545406.1| chromosome segregation protein SMC [Herpetosiphon aurantiacus ATCC 23779] gi|159892198|gb|ABX05278.1| chromosome segregation protein SMC [Herpetosiphon aurantiacus ATCC 23779] Length = 1192 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F IEF +T + G NG GKS++++AI W+ Sbjct: 6 LEIQGFKTFANRTVIEFPLGVTAIVGPNGSGKSNVTDAIRWVL 48 >gi|307546311|ref|YP_003898790.1| chromosome segregation protein [Halomonas elongata DSM 2581] gi|307218335|emb|CBV43605.1| K03529 chromosome segregation protein [Halomonas elongata DSM 2581] Length = 1164 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++T + G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLTSIRLAGFKSFVDPISVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGESM 61 >gi|210633203|ref|ZP_03297719.1| hypothetical protein COLSTE_01632 [Collinsella stercoris DSM 13279] gi|210159208|gb|EEA90179.1| hypothetical protein COLSTE_01632 [Collinsella stercoris DSM 13279] Length = 551 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + + F LT++ G NG GKS++S+AI W+ + ++ G +++ Sbjct: 3 LKSLTLKGFKSFADRAHMTFEPGLTVIVGPNGSGKSNVSDAILWVLGEQSAKQLRGQAME 62 >gi|158320493|ref|YP_001513000.1| chromosome segregation protein SMC [Alkaliphilus oremlandii OhILAs] gi|158140692|gb|ABW19004.1| chromosome segregation protein SMC [Alkaliphilus oremlandii OhILAs] Length = 1194 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EI F+ F +I F +T V G NG GKS++S++I W+ Sbjct: 2 QLKKLEIQGFKSFANKIEINFESGITGVVGPNGSGKSNISDSIRWVL 48 >gi|16800824|ref|NP_471092.1| hypothetical protein lin1756 [Listeria innocua Clip11262] gi|16414243|emb|CAC96987.1| lin1756 [Listeria innocua Clip11262] Length = 660 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KLL +++ +F+G E++ I+F D+ +I G N GK+++ +A WL + K +I Sbjct: 19 KLLKLQLENFKGIKELE-IDFQDNTSIY-GANASGKTTILDAFTWLLFDKDSTNKKDFAI 76 Query: 88 K 88 K Sbjct: 77 K 77 >gi|123444611|ref|XP_001311074.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892870|gb|EAX98144.1| hypothetical protein TVAG_332540 [Trichomonas vaginalis G3] Length = 755 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 25/41 (60%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 Q I+ D +T++ G NG GK+++ EAI++ G +Q G Sbjct: 25 QTIDLDDKMTLITGPNGSGKTTIFEAIQYALIGVSQENSGG 65 >gi|118467978|ref|YP_889254.1| hypothetical protein MSMEG_5002 [Mycobacterium smegmatis str. MC2 155] gi|118169265|gb|ABK70161.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 877 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 2/47 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWL 73 KL + ++++RG T ++IEF DH + +V+G N GKSS+ EA++ L Sbjct: 2 KLHRLVLTNYRGITH-REIEFPDHGVVVVSGANEIGKSSMIEALDLL 47 >gi|56964062|ref|YP_175793.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16] gi|56910305|dbj|BAD64832.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16] Length = 1188 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ F+ F E ++F +T V G NG GKS++++A+ W+ + R G Sbjct: 6 LEVKGFKSFAEPILVDFVPGVTAVVGPNGSGKSNIADAVRWVLGEQSARSLRG 58 >gi|291543777|emb|CBL16886.1| hypothetical protein RUM_06770 [Ruminococcus sp. 18P13] Length = 660 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ K L +E +FR F + F+ ++T++ G N +GK++L +A W FYG + Sbjct: 1 MLIKTLRME--NFRQFKGTTNVSFSVDPKQNVTVILGDNTFGKTTLLQAFNWCFYGIAKF 58 Query: 81 RKHGDSIKKRSIKTPM 96 + D + I + M Sbjct: 59 DHNPDMLLNLEIASEM 74 >gi|299069709|emb|CBJ40985.1| hypothethical protein [Ralstonia solanacearum CMR15] Length = 170 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + K+ + I +FR ++ I F D +T G NG GKS+ A++W F G Sbjct: 38 VMKIQSVRIKNFRALKDVT-IPF-DSVTTFIGPNGAGKSTALRALDWYFNG 86 >gi|268318565|ref|YP_003292221.1| DNA replication and repair protein RecF [Lactobacillus johnsonii FI9785] gi|262396940|emb|CAX65954.1| DNA replication and repair protein RecF [Lactobacillus johnsonii FI9785] Length = 374 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + E+ FR F E+ KI F H+ I G N GK++L EAI +L Sbjct: 3 LANFELKDFRNFEEL-KINFDPHVNIFIGPNAQGKTNLLEAIYFL 46 >gi|237795888|ref|YP_002863440.1| chromosome segregation protein SMC [Clostridium botulinum Ba4 str. 657] gi|229263914|gb|ACQ54947.1| chromosome segregation protein SMC [Clostridium botulinum Ba4 str. 657] Length = 1193 Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F + ++ F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKSIEVRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|260102298|ref|ZP_05752535.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083895|gb|EEW68015.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 689 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI++FR F E Q I F + + I+ G N GK+++ AI +F Sbjct: 11 VEITNFRTFKEKQIIRFTEGINILVGPNNIGKTTIISAIRLIF 53 >gi|239831369|ref|ZP_04679698.1| chromosome segregation protein SMC [Ochrobactrum intermedium LMG 3301] gi|239823636|gb|EEQ95204.1| chromosome segregation protein SMC [Ochrobactrum intermedium LMG 3301] Length = 1164 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 R+L+ + + + F+ F E + LT V G NG GKS+L EA+ W+ Sbjct: 8 GRRLLMRFSKLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWV 59 >gi|254500968|ref|ZP_05113119.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] gi|222437039|gb|EEE43718.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] Length = 1156 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG--DSI 87 + I+ F+ F E + D LT V G NG GKS+L EA+ W+ Y R G D I Sbjct: 10 LRIAGFKSFVEPMEFIIDDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASGMDDVI 69 Query: 88 KKRSIKTP 95 S+ P Sbjct: 70 FSGSLNRP 77 >gi|148977726|ref|ZP_01814287.1| hypothetical purine NTPase [Vibrionales bacterium SWAT-3] gi|145963094|gb|EDK28363.1| hypothetical purine NTPase [Vibrionales bacterium SWAT-3] Length = 784 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 29/47 (61%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I +F+ F + + D L +++G NG+GKSS +A+E LF G +R Sbjct: 10 IQNFKLFERREIVIDNDRLIVLDGPNGFGKSSFFDALELLFTGTIRR 56 >gi|218246306|ref|YP_002371677.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] gi|218166784|gb|ACK65521.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] Length = 1226 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTSIPFLTGFTVVSGPNGSGKSNILDAL 45 >gi|295109854|emb|CBL23807.1| condensin subunit Smc [Ruminococcus obeum A2-162] Length = 1186 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|15643938|ref|NP_228987.1| chromosome segregation SMC protein, putative [Thermotoga maritima MSB8] gi|4981731|gb|AAD36257.1|AE001774_14 chromosome segregation SMC protein, putative [Thermotoga maritima MSB8] Length = 1170 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F Sbjct: 2 RLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVF 48 >gi|319779223|ref|YP_004130136.1| Chromosome partition protein smc [Taylorella equigenitalis MCE9] gi|317109247|gb|ADU91993.1| Chromosome partition protein smc [Taylorella equigenitalis MCE9] Length = 1173 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E I +L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTHIKLSGFKSFVETTDIAIPSNLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|47104068|ref|YP_015497.1| putative exonuclease [Photobacterium profundum SS9] gi|46911632|emb|CAG17981.1| putative exonuclease[Photobacterium profundum SS9] Length = 665 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I KL + IS+F+ F + Q +I+F + LT + G NG GK+S +A+ +F Sbjct: 3 IMKLSKVRISNFQCFDQSQTEIDFEEQLTALIGLNGSGKTSTLQALSRMF 52 >gi|320528386|ref|ZP_08029548.1| segregation protein SMC [Solobacterium moorei F0204] gi|320131300|gb|EFW23868.1| segregation protein SMC [Solobacterium moorei F0204] Length = 981 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + I+F +T + G NG GKS++++++ W+ + + GD + Sbjct: 6 IEMQGFKSFADRTIIQFDHPITGIVGPNGCGKSNIADSVRWVLGEQSAKSMRGDKM 61 >gi|153810623|ref|ZP_01963291.1| hypothetical protein RUMOBE_01007 [Ruminococcus obeum ATCC 29174] gi|149833019|gb|EDM88101.1| hypothetical protein RUMOBE_01007 [Ruminococcus obeum ATCC 29174] Length = 1186 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|313672426|ref|YP_004050537.1| chromosome segregation protein smc [Calditerrivibrio nitroreducens DSM 19672] gi|312939182|gb|ADR18374.1| chromosome segregation protein SMC [Calditerrivibrio nitroreducens DSM 19672] Length = 1118 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I F+ F + I+F D +T + G NG GKS++ +AI W+ Sbjct: 8 IQGFKSFVDKTVIDFPDGITCIVGPNGSGKSNILDAIRWIL 48 >gi|312138759|ref|YP_004006095.1| exonuclease sbcc [Rhodococcus equi 103S] gi|311888098|emb|CBH47410.1| putative exonuclease SbcC [Rhodococcus equi 103S] Length = 993 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRK 82 +L D++++ F F E ++F AD L +++GQ G GK+++ +A+ + YG RK Sbjct: 2 RLHDLQVTAFGPFAETVTVDFDELGADGLFLLHGQTGAGKTTILDAVAFALYGTVPGARK 61 Query: 83 HGDSI 87 G + Sbjct: 62 EGKRL 66 >gi|225870876|ref|YP_002746823.1| chromosome partition protein [Streptococcus equi subsp. equi 4047] gi|225700280|emb|CAW94533.1| putative chromosome partition protein [Streptococcus equi subsp. equi 4047] Length = 1183 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +I++ F+ F + KI F +T V G NG GKS+++E++ W Sbjct: 3 LKEIQMQGFKSFADKTKIIFDKGVTAVVGPNGSGKSNVTESLRW 46 >gi|73662844|ref|YP_301625.1| chromosome segregation SMC protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495359|dbj|BAE18680.1| chromosome segregation SMC protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 1189 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F E ++F + +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAFGFKSFAEHTNVQFDEGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|306834801|ref|ZP_07467865.1| recombination protein F [Corynebacterium accolens ATCC 49726] gi|304569329|gb|EFM44830.1| recombination protein F [Corynebacterium accolens ATCC 49726] Length = 397 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 D+++ FR + E+ K+E +T+ G+NG+GK+++ EA+ + + + R H + ++ Sbjct: 5 DLDVRDFRSWPEL-KLELGPGITLFVGRNGFGKTNIVEAVGYTAHLSSHRVSHDSPLVRQ 63 Query: 91 SIKT 94 ++ Sbjct: 64 GAQS 67 >gi|288961586|ref|YP_003451896.1| chromosome segregation protein [Azospirillum sp. B510] gi|288913866|dbj|BAI75352.1| chromosome segregation protein [Azospirillum sp. B510] Length = 1153 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +S F+ F + + +T + G NG GKS+L EA+ W+ + +R GD + Sbjct: 6 LRLSGFKSFVDATDLVIEPGMTGIVGPNGCGKSNLVEALRWVMGETSAKRMRGDDM 61 >gi|227502244|ref|ZP_03932293.1| recombination protein F [Corynebacterium accolens ATCC 49725] gi|227077068|gb|EEI15031.1| recombination protein F [Corynebacterium accolens ATCC 49725] Length = 396 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 D+++ FR + E+ K+E +T+ G+NG+GK+++ EA+ + + + R H + ++ Sbjct: 5 DLDVRDFRSWPEL-KLELGPGITLFVGRNGFGKTNIVEAVGYTAHLSSHRVSHDSPLVRQ 63 Query: 91 SIKT 94 ++ Sbjct: 64 GAQS 67 >gi|167758291|ref|ZP_02430418.1| hypothetical protein CLOSCI_00629 [Clostridium scindens ATCC 35704] gi|167664188|gb|EDS08318.1| hypothetical protein CLOSCI_00629 [Clostridium scindens ATCC 35704] Length = 1186 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEVQGFKSFAHKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGSMQ 62 >gi|332991511|gb|AEF01566.1| Recombinational DNA repair ATPase [Alteromonas sp. SN2] Length = 362 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDS 86 KL +++++FR + + + LTI+ G NG GKSSL E+I +L +G + R KH Sbjct: 2 KLDKVQLTNFRNISS-ANLSPSPALTIIRGVNGSGKSSLVESIFYLGFGRSFRTNKHTSV 60 Query: 87 IK 88 IK Sbjct: 61 IK 62 >gi|325290419|ref|YP_004266600.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] gi|324965820|gb|ADY56599.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] Length = 1198 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ F + K+EF + ++ G NG GKS++++A+ W+ Sbjct: 14 LHIQGFKSFADKLKLEFGAGMCVIVGPNGSGKSNVADAVRWVL 56 >gi|325676548|ref|ZP_08156226.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus equi ATCC 33707] gi|325552726|gb|EGD22410.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus equi ATCC 33707] Length = 993 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L D++++ F F E ++F AD L +++GQ G GK+++ +A+ + YG Sbjct: 2 RLHDLQVTAFGPFAETVTVDFDELGADGLFLLHGQTGAGKTTILDAVAFALYG 54 >gi|219128749|ref|XP_002184568.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404018|gb|EEC43967.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1232 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 I IS+FR F + +IE F+ H V G+NG GKS+L +A++++ Sbjct: 6 ITISNFRSFRQQPEIEAFSTHTNCVVGRNGSGKSNLLDAVQFVL 49 >gi|322375789|ref|ZP_08050300.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] gi|321279057|gb|EFX56099.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] Length = 899 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ F I+F+D +T + G NGYGK+++ +AIE G R Sbjct: 2 KIRKILLYNFKNFRNETVIDFSDGITFLVGPNGYGKTTIFDAIELGLTGNLSR 54 >gi|237799567|ref|ZP_04588028.1| chromosome segregation protein SMC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022423|gb|EGI02480.1| chromosome segregation protein SMC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 227 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|254234488|ref|ZP_04927811.1| hypothetical protein PACG_00346 [Pseudomonas aeruginosa C3719] gi|126166419|gb|EAZ51930.1| hypothetical protein PACG_00346 [Pseudomonas aeruginosa C3719] Length = 610 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I++SHFRG+ I +T + G+N YGKS++ EA+ F Sbjct: 2 RLKTIKLSHFRGYRTTTVIPIDVAMTGIVGRNDYGKSTVLEALAIFF 48 >gi|225025908|ref|ZP_03715100.1| hypothetical protein EUBHAL_00144 [Eubacterium hallii DSM 3353] gi|224956694|gb|EEG37903.1| hypothetical protein EUBHAL_00144 [Eubacterium hallii DSM 3353] Length = 1187 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L IEI+ F+ F EF +T + G NG GKS++ +A+ W+ + R+ G Sbjct: 3 LKSIEINGFKSFANKIVFEFPQGITGIVGPNGSGKSNIGDAVRWVLGEQSARQLRG 58 >gi|124003422|ref|ZP_01688271.1| ATP-binding protein [Microscilla marina ATCC 23134] gi|123990991|gb|EAY30443.1| ATP-binding protein [Microscilla marina ATCC 23134] Length = 449 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 2/44 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 K+ ++E+++FRGF + KI+F D+ L + G NG GKSS+ +A+ Sbjct: 2 KIKELELNNFRGFKHL-KIQFPDNNLAVFIGTNGSGKSSVLDAL 44 >gi|240147291|ref|ZP_04745892.1| conserved hypothetical protein [Roseburia intestinalis L1-82] gi|257200517|gb|EEU98801.1| conserved hypothetical protein [Roseburia intestinalis L1-82] Length = 521 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ I+I +FR + E I F D+LT++ G+N GKS++ EA++ F Sbjct: 2 KIESIKIKNFRSYKEETIIRF-DNLTVLVGRNDIGKSTILEALDIFF 47 >gi|312863962|ref|ZP_07724199.1| conserved hypothetical protein [Streptococcus vestibularis F0396] gi|311100528|gb|EFQ58734.1| conserved hypothetical protein [Streptococcus vestibularis F0396] Length = 601 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I+I++FRG+ + ++F D+LT G+N GKS++ EA+E F Sbjct: 2 RLKQIKINNFRGYKDETIVDF-DNLTAFIGKNDVGKSTILEALEIFF 47 >gi|290890415|ref|ZP_06553490.1| hypothetical protein AWRIB429_0880 [Oenococcus oeni AWRIB429] gi|290479811|gb|EFD88460.1| hypothetical protein AWRIB429_0880 [Oenococcus oeni AWRIB429] Length = 821 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I IS F F++ ++F + L ++ GQN GKS+L + I + +G+ Q ++ ++ Sbjct: 6 IHISGFGKFSDFN-LDFKNDLQVIYGQNEAGKSTLRQFITGILFGFAQNKRQSSNL 60 >gi|256847359|ref|ZP_05552805.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] gi|256716023|gb|EEU30998.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] Length = 1189 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L+ +EI F+ F I+F +T + G NG GKS++ EA+ W+ Sbjct: 2 QLVSMEIDGFKSFAHKTTIKFQPGMTGIIGPNGSGKSNVIEALRWV 47 >gi|116490941|ref|YP_810485.1| DNA repair ATPase [Oenococcus oeni PSU-1] gi|116091666|gb|ABJ56820.1| DNA repair ATPase [Oenococcus oeni PSU-1] Length = 821 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I IS F F++ ++F + L ++ GQN GKS+L + I + +G+ Q ++ ++ Sbjct: 6 IHISGFGKFSDFN-LDFKNDLQVIYGQNEAGKSTLRQFITGILFGFAQNKRQSSNL 60 >gi|159026992|emb|CAO86712.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159028061|emb|CAO87138.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159028989|emb|CAO87450.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 255 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 DIEIS+FR F E KIE + + ++ G+N GK++L EAI Y Y I+ Sbjct: 4 DIEISNFRCF-EHTKIEGFERVNLIGGKNNSGKTALLEAI--FLYSYPYPNTIHPYIRGI 60 Query: 91 SIKTPMPMCMAVPRCKYQ 108 + + + AVP+ + Sbjct: 61 IRRQSLAVVQAVPKNAWD 78 >gi|56419728|ref|YP_147046.1| chromosome segregation ATPase [Geobacillus kaustophilus HTA426] gi|56379570|dbj|BAD75478.1| chromosome segregation ATPase (SMC) [Geobacillus kaustophilus HTA426] Length = 1187 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|310828473|ref|YP_003960830.1| chromosome segregation protein SMC [Eubacterium limosum KIST612] gi|308740207|gb|ADO37867.1| chromosome segregation protein SMC [Eubacterium limosum KIST612] Length = 1192 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 30/46 (65%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + ++ F+ F E ++EF+ ++ + G NG GKS++++AI W+ Sbjct: 3 LKKLALAGFKSFAEPVELEFSKGVSAIVGPNGSGKSNITDAIRWVL 48 >gi|307352886|ref|YP_003893937.1| chromosome segregation protein SMC [Methanoplanus petrolearius DSM 11571] gi|307156119|gb|ADN35499.1| chromosome segregation protein SMC [Methanoplanus petrolearius DSM 11571] Length = 1146 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 29/42 (69%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++EI +F+ F + KI F + T+++G NG GKS++ ++I Sbjct: 3 ITELEIDNFKSFAKKTKIPFYEGFTVISGPNGSGKSNIIDSI 44 >gi|300214419|gb|ADJ78835.1| Chromosome partition protein [Lactobacillus salivarius CECT 5713] Length = 861 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ Sbjct: 2 KIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVL 48 >gi|170289417|ref|YP_001739655.1| chromosome segregation protein SMC [Thermotoga sp. RQ2] gi|281412999|ref|YP_003347078.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10] gi|170176920|gb|ACB09972.1| chromosome segregation protein SMC [Thermotoga sp. RQ2] gi|281374102|gb|ADA67664.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10] Length = 1170 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F Sbjct: 2 RLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVF 48 >gi|34499363|ref|NP_903578.1| chromosome segregation protein [Chromobacterium violaceum ATCC 12472] gi|34105213|gb|AAQ61569.1| probable chromosome segregation protein [Chromobacterium violaceum ATCC 12472] Length = 1162 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLAGFKSFVDPTSIAVPGQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|222100368|ref|YP_002534936.1| Condensin subunit Smc [Thermotoga neapolitana DSM 4359] gi|221572758|gb|ACM23570.1| Condensin subunit Smc [Thermotoga neapolitana DSM 4359] Length = 1170 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F Sbjct: 2 RLKKLFLKGFKSFGRPSLITFSDRVTAIVGPNGSGKSNIIDAIKWVF 48 >gi|325842999|ref|ZP_08167846.1| putative DNA sulfur modification protein DndD [Turicibacter sp. HGF1] gi|325489462|gb|EGC91831.1| putative DNA sulfur modification protein DndD [Turicibacter sp. HGF1] Length = 666 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 32 IEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I I +FR F+ +EF+ +LTI++ NG GK++L +A W YG Sbjct: 6 INIINFRQFSGENLLEFSVNDEKNLTIIHAMNGSGKTTLLQAFNWCLYG 54 >gi|307941614|ref|ZP_07656969.1| chromosome segregation protein SMC [Roseibium sp. TrichSKD4] gi|307775222|gb|EFO34428.1| chromosome segregation protein SMC [Roseibium sp. TrichSKD4] Length = 1152 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG- 84 K + + F+ F E + D LT V G NG GKS+L EA+ W+ Y R G Sbjct: 2 KFSKLRVVGFKSFVEPMEFIIGDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASGM 61 Query: 85 -DSIKKRSIKTP 95 D I S+ P Sbjct: 62 DDVIFSGSLNRP 73 >gi|293376097|ref|ZP_06622348.1| putative DNA sulfur modification protein DndD [Turicibacter sanguinis PC909] gi|292645299|gb|EFF63358.1| putative DNA sulfur modification protein DndD [Turicibacter sanguinis PC909] Length = 666 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 32 IEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I I +FR F+ +EF+ +LTI++ NG GK++L +A W YG Sbjct: 6 INIINFRQFSGENLLEFSVNDEKNLTIIHAMNGSGKTTLLQAFNWCLYG 54 >gi|148270693|ref|YP_001245153.1| chromosome segregation protein SMC [Thermotoga petrophila RKU-1] gi|147736237|gb|ABQ47577.1| condensin subunit Smc [Thermotoga petrophila RKU-1] Length = 1170 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F Sbjct: 2 RLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVF 48 >gi|310658887|ref|YP_003936608.1| chromosome condensation and segregation smc ATPase [Clostridium sticklandii DSM 519] gi|308825665|emb|CBH21703.1| chromosome condensation and segregation SMC ATPase [Clostridium sticklandii] Length = 1177 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 32/60 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + +I F L V G NG GKS++ +AI W+ + + GD ++ Sbjct: 3 LKKMEIKGFKSFPDKTEILFPHGLISVVGPNGSGKSNILDAIRWVLGEQSMKSLRGDKLE 62 >gi|226226600|ref|YP_002760706.1| chromosome segregation protein [Gemmatimonas aurantiaca T-27] gi|226089791|dbj|BAH38236.1| chromosome segregation protein [Gemmatimonas aurantiaca T-27] Length = 1191 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E+ F+ F + + F +T + G NG GKS++S+A+ W+ Sbjct: 2 RLTKLEVHGFKAFADHLEFVFEKGVTAIVGPNGSGKSNVSDAVRWVL 48 >gi|297530631|ref|YP_003671906.1| chromosome segregation protein SMC [Geobacillus sp. C56-T3] gi|297253883|gb|ADI27329.1| chromosome segregation protein SMC [Geobacillus sp. C56-T3] Length = 1187 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|294055882|ref|YP_003549540.1| chromosome segregation protein SMC [Coraliomargarita akajimensis DSM 45221] gi|293615215|gb|ADE55370.1| chromosome segregation protein SMC [Coraliomargarita akajimensis DSM 45221] Length = 1241 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I IS F+ F + +++ +T V G NG GKS++ +AI W+ + + G S++ Sbjct: 3 LKEIVISGFKSFADRTRLDLRRGVTAVVGPNGCGKSNIVDAIRWVLGEQSAKALRGASMQ 62 >gi|261419392|ref|YP_003253074.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC61] gi|319766207|ref|YP_004131708.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC52] gi|261375849|gb|ACX78592.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC61] gi|317111073|gb|ADU93565.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC52] Length = 1187 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|119509397|ref|ZP_01628546.1| DNA repair and genetic recombination protein [Nodularia spumigena CCY9414] gi|119466011|gb|EAW46899.1| DNA repair and genetic recombination protein [Nodularia spumigena CCY9414] Length = 376 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L ++ + FR + + QK+EF TI+ G N GKS+L EA+E L Sbjct: 3 LKNLHLRQFRNYQD-QKVEFTAAKTILVGNNAQGKSNLLEAVELL 46 >gi|28375551|emb|CAD66599.1| SMC protein [Geobacillus stearothermophilus] Length = 1187 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|330908687|gb|EGH37201.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Escherichia coli AA86] Length = 577 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I KL +I + FRG I IEF LT++ G+NG KS++ I +F Sbjct: 5 ITKLKNINVVKFRGLKNIN-IEFGSRLTVICGKNGTSKSTILGIIAQIF 52 >gi|330813674|ref|YP_004357913.1| chromosome partition protein smc [Candidatus Pelagibacter sp. IMCC9063] gi|327486769|gb|AEA81174.1| chromosome partition protein smc [Candidatus Pelagibacter sp. IMCC9063] Length = 881 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 25/45 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 K +E+ F+ F + F D LT + G NG GKS++ EA+ W Sbjct: 2 KFKQLEVVGFKSFADKTSFYFEDGLTGIVGPNGCGKSNIVEALRW 46 >gi|220935194|ref|YP_002514093.1| chromosome segregation SMC protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996504|gb|ACL73106.1| chromosome segregation SMC protein [Thioalkalivibrio sp. HL-EbGR7] Length = 1168 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I+ +L + G NG GKS+ +A+ W+ + + GDS+ Sbjct: 2 RLSKIKLAGFKSFVDPTTIDLPSNLVGIVGPNGCGKSNTIDAVRWVMGESSAKHLRGDSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|110667658|ref|YP_657469.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] gi|109625405|emb|CAJ51829.1| DNA double-strand break repair rad50 ATPase [Haloquadratum walsbyi DSM 16790] Length = 898 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I + HF+ + + ++ D +TI++G NG GKSSL EA + YG Sbjct: 6 ITLEHFKPYAD-ASLDLQDGVTIIHGLNGSGKSSLLEACFFALYG 49 >gi|25026560|ref|NP_736614.1| recombination protein F [Corynebacterium efficiens YS-314] gi|259508308|ref|ZP_05751208.1| RecF protein [Corynebacterium efficiens YS-314] gi|51316473|sp|Q8FUL4|RECF_COREF RecName: Full=DNA replication and repair protein recF gi|23491839|dbj|BAC16814.1| putative DNA replication and repair protein RecF [Corynebacterium efficiens YS-314] gi|259164126|gb|EEW48680.1| RecF protein [Corynebacterium efficiens YS-314] Length = 398 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E+ FR + E+ K+E +TI G+NG+GK+++ EAI +L + + R Sbjct: 6 LELRDFRSWPEL-KVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHR 53 >gi|322418393|ref|YP_004197616.1| chromosome segregation protein SMC [Geobacter sp. M18] gi|320124780|gb|ADW12340.1| chromosome segregation protein SMC [Geobacter sp. M18] Length = 1177 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KIKRLEIHGFKSFQDKSVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|294673766|ref|YP_003574382.1| hypothetical protein PRU_1052 [Prevotella ruminicola 23] gi|294473447|gb|ADE82836.1| conserved hypothetical protein [Prevotella ruminicola 23] Length = 719 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGF-TEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++EI +FR + + EF LT++ G NG GK++ EA+EWLF Sbjct: 3 LKELEIRNFRSYYGNENRFEFNPTGLTLIIGDNGDGKTTFFEALEWLF 50 >gi|312111707|ref|YP_003990023.1| chromosome segregation protein SMC [Geobacillus sp. Y4.1MC1] gi|311216808|gb|ADP75412.1| chromosome segregation protein SMC [Geobacillus sp. Y4.1MC1] Length = 1187 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|227824341|ref|ZP_03989173.1| chromosome segregation protein SMC [Acidaminococcus sp. D21] gi|226904840|gb|EEH90758.1| chromosome segregation protein SMC [Acidaminococcus sp. D21] Length = 1186 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L E F+ F + + F + +T + G NG GKS++S+AI W+ Sbjct: 2 RLKSFEAHGFKSFADKVNVNFENGITAIVGPNGSGKSNISDAIRWV 47 >gi|226941793|ref|YP_002796867.1| SMC protein [Laribacter hongkongensis HLHK9] gi|226716720|gb|ACO75858.1| SMC protein [Laribacter hongkongensis HLHK9] Length = 1162 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S+ Sbjct: 2 RLTHIKLAGFKSFVDPTAIPVPGQLVAVCGPNGCGKSNVIDAVRWVLGESSAKQLRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|295399781|ref|ZP_06809762.1| chromosome segregation protein SMC [Geobacillus thermoglucosidasius C56-YS93] gi|294978184|gb|EFG53781.1| chromosome segregation protein SMC [Geobacillus thermoglucosidasius C56-YS93] Length = 1187 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|270159077|ref|ZP_06187733.1| chromosome partition protein SMC [Legionella longbeachae D-4968] gi|289166087|ref|YP_003456225.1| chromosome partition protein smc [Legionella longbeachae NSW150] gi|269987416|gb|EEZ93671.1| chromosome partition protein SMC [Legionella longbeachae D-4968] gi|288859260|emb|CBJ13194.1| putative chromosome partition protein smc [Legionella longbeachae NSW150] Length = 1164 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + R G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTVVHFPSQLVAVVGPNGCGKSNIIDAVRWVMGESSARNLRGESM 61 >gi|193216951|ref|YP_002000193.1| chromosome segregation ATPase Smc [Mycoplasma arthritidis 158L3-1] gi|193002274|gb|ACF07489.1| chromosome segregation ATPase Smc [Mycoplasma arthritidis 158L3-1] Length = 978 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ +E F+ F + + F + + G NG GKS++++AI W+ + + GD++ Sbjct: 2 KLIKVEAHGFKSFADKVTLMFDGGVVAIIGPNGSGKSNINDAIRWVLGETSSKALRGDNM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|302335014|ref|YP_003800221.1| hypothetical protein Olsu_0209 [Olsenella uli DSM 7084] gi|301318854|gb|ADK67341.1| conserved hypothetical protein [Olsenella uli DSM 7084] Length = 520 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ +EI++FRG+ ++ D LT+ G+N GKSS+ EA++ F Sbjct: 2 KIRSVEITNFRGYASETEVAM-DDLTVFVGKNDIGKSSVLEALDIFF 47 >gi|291446406|ref|ZP_06585796.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291349353|gb|EFE76257.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 815 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLT----IVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L +E+S RG K+ F + ++ G+NG GKS++ +AIE+ G R H Sbjct: 245 RLRSVELSALRGAPGRLKLTFGKKSSPSSALIFGENGTGKSTIVDAIEFALQGRIGRSAH 304 Query: 84 GDSIKKRSIKT 94 DS S+++ Sbjct: 305 YDSPLAPSLRS 315 >gi|296121423|ref|YP_003629201.1| chromosome segregation protein SMC [Planctomyces limnophilus DSM 3776] gi|296013763|gb|ADG67002.1| chromosome segregation protein SMC [Planctomyces limnophilus DSM 3776] Length = 1255 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F + + +FA +T V G NG GKS++ +A++W+ Sbjct: 5 LELFGFKSFADRTRFDFASGITSVVGPNGSGKSNVVDALKWIL 47 >gi|239826586|ref|YP_002949210.1| chromosome segregation protein SMC [Geobacillus sp. WCH70] gi|239806879|gb|ACS23944.1| chromosome segregation protein SMC [Geobacillus sp. WCH70] Length = 1187 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I F+ F + IEF +T V G NG GKS++++AI W+ Sbjct: 6 LDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|251791113|ref|YP_003005834.1| AAA ATPase [Dickeya zeae Ech1591] gi|247539734|gb|ACT08355.1| AAA ATPase [Dickeya zeae Ech1591] Length = 573 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I KL I+I +FRG + + ++ AD +TIV G+NG KS++ I +F Sbjct: 5 ITKLKSIDIKNFRGLSGVS-LDIADRITIVCGKNGTSKSTILGIIAQVF 52 >gi|91216544|ref|ZP_01253510.1| ATPase involved in DNA repair [Psychroflexus torquis ATCC 700755] gi|91185338|gb|EAS71715.1| ATPase involved in DNA repair [Psychroflexus torquis ATCC 700755] Length = 700 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K ++EI++FR + + KI+ ++ ++ G+NGYGK++ ++ W YG Sbjct: 2 KFSNVEINNFRQYYDKVKIDLTTSTDQNIILIGGKNGYGKTNFLISVVWCLYG 54 >gi|87198977|ref|YP_496234.1| chromosome segregation protein SMC [Novosphingobium aromaticivorans DSM 12444] gi|87134658|gb|ABD25400.1| Chromosome segregation protein SMC [Novosphingobium aromaticivorans DSM 12444] Length = 1147 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F E ++ LT V G NG GKS+L EAI W+ Sbjct: 7 LKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWV 48 >gi|85374547|ref|YP_458609.1| chromosome segregation protein [Erythrobacter litoralis HTCC2594] gi|84787630|gb|ABC63812.1| chromosome segregation protein [Erythrobacter litoralis HTCC2594] Length = 1140 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F E ++ LT V G NG GKS+L EAI W+ Sbjct: 6 LKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWV 47 >gi|85709148|ref|ZP_01040214.1| SMC protein [Erythrobacter sp. NAP1] gi|85690682|gb|EAQ30685.1| SMC protein [Erythrobacter sp. NAP1] Length = 1140 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F E ++ LT V G NG GKS+L EAI W+ Sbjct: 6 LKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWV 47 >gi|220934933|ref|YP_002513832.1| SMC domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996243|gb|ACL72845.1| SMC domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 880 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAI 70 IE+SHFR +IE D LTI+ G N GKS+L EA+ Sbjct: 7 IEVSHFRKLKGPVRIEGLEDGLTIIAGDNEEGKSTLLEAV 46 >gi|166031774|ref|ZP_02234603.1| hypothetical protein DORFOR_01475 [Dorea formicigenerans ATCC 27755] gi|166028227|gb|EDR46984.1| hypothetical protein DORFOR_01475 [Dorea formicigenerans ATCC 27755] Length = 1186 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|225571977|ref|ZP_03780841.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM 10507] gi|225040510|gb|EEG50756.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM 10507] Length = 1186 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|326204788|ref|ZP_08194642.1| chromosome segregation protein SMC [Clostridium papyrosolvens DSM 2782] gi|325985000|gb|EGD45842.1| chromosome segregation protein SMC [Clostridium papyrosolvens DSM 2782] Length = 1190 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 Y RKL EI F+ F + ++F +T V G NG GKS++ +A+ W+ Sbjct: 2 YLRKL-------EIQGFKSFADKISLDFHSGITAVVGPNGSGKSNIGDAVRWVL 48 >gi|289597054|ref|YP_003483750.1| chromosome segregation protein SMC [Aciduliprofundum boonei T469] gi|289534841|gb|ADD09188.1| chromosome segregation protein SMC [Aciduliprofundum boonei T469] Length = 1184 Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 27/39 (69%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+ +F+ F ++EF + T ++G NG GKS++++AI Sbjct: 12 IELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAI 50 >gi|302389626|ref|YP_003825447.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM 16646] gi|302200254|gb|ADL07824.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM 16646] Length = 1185 Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F + +IEF + + G NG GKS++++AI W+ Sbjct: 6 VELQGFKSFADRIEIEFQPGINAIVGPNGSGKSNITDAIRWVL 48 >gi|22299718|ref|NP_682965.1| hypothetical protein tlr2175 [Thermosynechococcus elongatus BP-1] gi|22295902|dbj|BAC09727.1| tlr2175 [Thermosynechococcus elongatus BP-1] Length = 1003 Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 22/37 (59%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 HL + G NG GKSSL EAI W +G ++ + D I Sbjct: 25 HLACICGANGAGKSSLLEAIAWALWGQSRASREDDVI 61 >gi|254167241|ref|ZP_04874094.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] gi|197624097|gb|EDY36659.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] Length = 1178 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 27/39 (69%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+ +F+ F ++EF + T ++G NG GKS++++AI Sbjct: 6 IELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAI 44 >gi|67924337|ref|ZP_00517770.1| GTP-binding [Crocosphaera watsonii WH 8501] gi|67853823|gb|EAM49149.1| GTP-binding [Crocosphaera watsonii WH 8501] Length = 1221 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|260432725|ref|ZP_05786696.1| chromosome segregation protein SMC [Silicibacter lacuscaerulensis ITI-1157] gi|260416553|gb|EEX09812.1| chromosome segregation protein SMC [Silicibacter lacuscaerulensis ITI-1157] Length = 1151 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 2 RFTKLKLTGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|254464932|ref|ZP_05078343.1| chromosome segregation protein SMC [Rhodobacterales bacterium Y4I] gi|206685840|gb|EDZ46322.1| chromosome segregation protein SMC [Rhodobacterales bacterium Y4I] Length = 1151 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTELVIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|254167742|ref|ZP_04874592.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] gi|197623270|gb|EDY35835.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] Length = 1178 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 27/39 (69%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+ +F+ F ++EF + T ++G NG GKS++++AI Sbjct: 6 IELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAI 44 >gi|78045010|ref|YP_360275.1| chromosome segregation protein SMC [Carboxydothermus hydrogenoformans Z-2901] gi|77997125|gb|ABB16024.1| chromosome segregation protein SMC [Carboxydothermus hydrogenoformans Z-2901] Length = 1185 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 26/44 (59%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L + I F+ F E +I F +T + G NG GKS+++EAI W Sbjct: 2 LKKVVIQGFKSFAEKTEITFEPSITGIVGPNGSGKSNVAEAIRW 45 >gi|302872006|ref|YP_003840642.1| chromosome segregation protein SMC [Caldicellulosiruptor obsidiansis OB47] gi|302574865|gb|ADL42656.1| chromosome segregation protein SMC [Caldicellulosiruptor obsidiansis OB47] Length = 1177 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +EI F+ F E +IE +T + G NG GKS++++AI W Sbjct: 6 LEIYGFKSFCEKTRIELQKGITAIVGPNGCGKSNITDAIRW 46 >gi|161528753|ref|YP_001582579.1| SMC domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340054|gb|ABX13141.1| SMC domain protein [Nitrosopumilus maritimus SCM1] Length = 693 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F ++ K+EF + +T+ G NG GKSS+ +AI + +G R+ + IK Sbjct: 2 ITSIELGDFLAHSD-TKLEFDNGVTVFVGHNGAGKSSIIDAITFALFGQHTRKSNKGLIK 60 Query: 89 K 89 + Sbjct: 61 R 61 >gi|331089417|ref|ZP_08338316.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 3_1_46FAA] gi|330404785|gb|EGG84323.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 3_1_46FAA] Length = 1186 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|321315360|ref|YP_004207647.1| chromosome partition protein SMC [Bacillus subtilis BSn5] gi|320021634|gb|ADV96620.1| chromosome partition protein SMC [Bacillus subtilis BSn5] Length = 1186 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGKME 62 >gi|311068115|ref|YP_003973038.1| chromosome segregation SMC protein [Bacillus atrophaeus 1942] gi|310868632|gb|ADP32107.1| chromosome segregation SMC protein [Bacillus atrophaeus 1942] Length = 1186 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGKME 62 >gi|296331169|ref|ZP_06873643.1| chromosome segregation SMC protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674325|ref|YP_003865997.1| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151813|gb|EFG92688.1| chromosome segregation SMC protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412569|gb|ADM37688.1| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. spizizenii str. W23] Length = 1186 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGKME 62 >gi|291484145|dbj|BAI85220.1| chromosome segregation SMC protein homologue [Bacillus subtilis subsp. natto BEST195] Length = 1186 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGKME 62 >gi|284929413|ref|YP_003421935.1| condensin subunit Smc [cyanobacterium UCYN-A] gi|284809857|gb|ADB95554.1| condensin subunit Smc [cyanobacterium UCYN-A] Length = 1198 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTSIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|210624033|ref|ZP_03294150.1| hypothetical protein CLOHIR_02102 [Clostridium hiranonis DSM 13275] gi|210153240|gb|EEA84246.1| hypothetical protein CLOHIR_02102 [Clostridium hiranonis DSM 13275] Length = 368 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL ++++ ++R + ++ IEF D + ++ G NG GK++++E+I L +G + R Sbjct: 2 KLKNLQLVNYRNYDKLY-IEFNDRINLLLGSNGQGKTNIAESIYLLAFGKSFR 53 >gi|221309469|ref|ZP_03591316.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. 168] gi|221313794|ref|ZP_03595599.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318718|ref|ZP_03600012.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. JH642] gi|221322989|ref|ZP_03604283.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. SMY] gi|255767364|ref|NP_389476.2| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168] gi|239938850|sp|P51834|SMC_BACSU RecName: Full=Chromosome partition protein smc gi|225184991|emb|CAB13467.2| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168] Length = 1186 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G ++ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGKME 62 >gi|153816162|ref|ZP_01968830.1| hypothetical protein RUMTOR_02410 [Ruminococcus torques ATCC 27756] gi|145846497|gb|EDK23415.1| hypothetical protein RUMTOR_02410 [Ruminococcus torques ATCC 27756] Length = 1186 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|297184263|gb|ADI20381.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L27A02] Length = 1151 Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|227903364|ref|ZP_04021169.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC 4796] gi|227868840|gb|EEJ76261.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC 4796] Length = 156 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 D+ I +R F + IE + HLT + G NG GKS++ Sbjct: 5 DLNIKDYRAFQKETNIELSKHLTAIAGMNGVGKSTI 40 >gi|170289089|ref|YP_001739327.1| SMC domain-containing protein [Thermotoga sp. RQ2] gi|170176592|gb|ACB09644.1| SMC domain protein [Thermotoga sp. RQ2] Length = 852 Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F G + IEF +T+V G NG GKSSL EAI + +G Sbjct: 6 LTVRNFLGLKNVD-IEFQSGITVVEGPNGAGKSSLFEAISFALFG 49 >gi|319941615|ref|ZP_08015939.1| hypothetical protein HMPREF9464_01158 [Sutterella wadsworthensis 3_1_45B] gi|319804845|gb|EFW01699.1| hypothetical protein HMPREF9464_01158 [Sutterella wadsworthensis 3_1_45B] Length = 1190 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+I+ F+ F + IE D L + G NG GKS++ +A+ W+ Sbjct: 3 LRQIKIAGFKSFADPVVIELRDPLIAIVGPNGCGKSNIIDAVRWVL 48 >gi|317500482|ref|ZP_07958706.1| chromosome segregation protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316898237|gb|EFV20284.1| chromosome segregation protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 1186 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|227904214|ref|ZP_04022019.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC 4796] gi|227868233|gb|EEJ75654.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC 4796] Length = 1189 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTVIHFNKGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|58337572|ref|YP_194157.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM] gi|58254889|gb|AAV43126.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM] Length = 1189 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + I F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTELVLDGFKSFADKTVIHFNKGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTNMK 62 >gi|72163067|ref|YP_290724.1| hypothetical protein Tfu_2668 [Thermobifida fusca YX] gi|71916799|gb|AAZ56701.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 695 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + + FRG +EF LT++ G+NG GKSS +EA+E G R Sbjct: 86 LRRVRVQGFRGIGRAATLEFPPGPGLTVIVGRNGSGKSSFAEAVEAALTGRNLR 139 >gi|322516542|ref|ZP_08069458.1| SMC family domain protein [Streptococcus vestibularis ATCC 49124] gi|322124930|gb|EFX96350.1| SMC family domain protein [Streptococcus vestibularis ATCC 49124] Length = 1177 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|228477669|ref|ZP_04062298.1| chromosome segregation protein SMC [Streptococcus salivarius SK126] gi|228250558|gb|EEK09769.1| chromosome segregation protein SMC [Streptococcus salivarius SK126] Length = 1177 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|218283537|ref|ZP_03489527.1| hypothetical protein EUBIFOR_02117 [Eubacterium biforme DSM 3989] gi|218215805|gb|EEC89343.1| hypothetical protein EUBIFOR_02117 [Eubacterium biforme DSM 3989] Length = 975 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + I+F +T + G NG GKS++++AI W+ Sbjct: 6 IELQGFKSFADKTVIQFDQDITGIVGPNGCGKSNVNDAIRWVL 48 >gi|172038210|ref|YP_001804711.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142] gi|171699664|gb|ACB52645.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142] Length = 1221 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|169349820|ref|ZP_02866758.1| hypothetical protein CLOSPI_00558 [Clostridium spiroforme DSM 1552] gi|169293388|gb|EDS75521.1| hypothetical protein CLOSPI_00558 [Clostridium spiroforme DSM 1552] Length = 285 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 16 SLTSYYA--RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 S+ SY RK +K+ +I G EI+ I F D +T++ GQ+G GKSSL A++ Sbjct: 115 SIESYVNDYRKAGYKVYEISSKDNYGIDEIKSI-FEDKVTVITGQSGVGKSSLLNALD 171 >gi|153003591|ref|YP_001377916.1| chromosome segregation protein SMC [Anaeromyxobacter sp. Fw109-5] gi|152027164|gb|ABS24932.1| chromosome segregation protein SMC [Anaeromyxobacter sp. Fw109-5] Length = 1198 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I F+ F + + F + +T V G NG GKS++++AI W+ + R G S++ Sbjct: 6 LDIVGFKSFMDKTVVAFDEGVTGVVGPNGCGKSNVADAIRWVLGEQSARHLRGRSME 62 >gi|114769591|ref|ZP_01447201.1| SMC protein [alpha proteobacterium HTCC2255] gi|114549296|gb|EAU52178.1| SMC protein [alpha proteobacterium HTCC2255] Length = 1151 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|119476277|ref|ZP_01616628.1| hypothetical protein GP2143_07499 [marine gamma proteobacterium HTCC2143] gi|119450141|gb|EAW31376.1| hypothetical protein GP2143_07499 [marine gamma proteobacterium HTCC2143] Length = 1168 Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+++ Sbjct: 2 RLKTIKLAGFKSFVDPTNVSFPSNLGCVVGPNGCGKSNIIDAVRWVMGESSAKNLRGENM 61 >gi|322373155|ref|ZP_08047691.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] gi|321278197|gb|EFX55266.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] Length = 1177 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|225419775|ref|ZP_03762078.1| hypothetical protein CLOSTASPAR_06113 [Clostridium asparagiforme DSM 15981] gi|225041579|gb|EEG51825.1| hypothetical protein CLOSTASPAR_06113 [Clostridium asparagiforme DSM 15981] Length = 1186 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANKLVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGASMQ 62 >gi|126668220|ref|ZP_01739181.1| recombination protein F [Marinobacter sp. ELB17] gi|126627369|gb|EAZ98005.1| recombination protein F [Marinobacter sp. ELB17] Length = 411 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ ++ HFR + + F+ +++G NG GK+SL EAI +L G + R Sbjct: 3 LITLQTEHFRNLAA-KPVTFSPAFNLIDGANGSGKTSLLEAIGYLGLGRSFR 53 >gi|159042437|ref|YP_001541689.1| SMC domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921272|gb|ABW02699.1| SMC domain protein [Caldivirga maquilingensis IC-167] Length = 805 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +E+ FR F F D L +++G G GKSS+ +AIE+ YG Sbjct: 10 VELEGFRVFKSRVVFNFIDGLNVIHGPIGSGKSSIIQAIEFALYG 54 >gi|332363649|gb|EGJ41429.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Streptococcus sanguinis SK49] Length = 601 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I+I +FRG+ + ++F D+LT G+N GKS++ EA+E F Sbjct: 2 RLKQIKIKNFRGYKDETIVDF-DNLTAFIGKNDAGKSTILEALEIFF 47 >gi|328544980|ref|YP_004305089.1| RecF/RecN/SMC N terminal domain [polymorphum gilvum SL003B-26A1] gi|326414722|gb|ADZ71785.1| RecF/RecN/SMC N terminal domain, putative [Polymorphum gilvum SL003B-26A1] Length = 1152 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG- 84 K + + F+ F E + D LT V G NG GKS+L EA+ W+ Y R G Sbjct: 2 KFNKLRVVGFKSFVEPMEFIIGDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASGM 61 Query: 85 -DSIKKRSIKTP 95 D I S+ P Sbjct: 62 DDVIFSGSLNRP 73 >gi|238923873|ref|YP_002937389.1| chromosome segregation protein SMC [Eubacterium rectale ATCC 33656] gi|238875548|gb|ACR75255.1| chromosome segregation protein SMC [Eubacterium rectale ATCC 33656] Length = 1186 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S++ Sbjct: 3 LKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGASMQ 62 >gi|168698986|ref|ZP_02731263.1| chromosome partition protein Smc [Gemmata obscuriglobus UQM 2246] Length = 1231 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F + + +FA +T V G NG GKS++ +A+ W+ Sbjct: 5 LELVGFKSFADKTRFDFAPGVTGVVGPNGSGKSNVVDAVRWIL 47 >gi|160938005|ref|ZP_02085362.1| hypothetical protein CLOBOL_02898 [Clostridium bolteae ATCC BAA-613] gi|158438999|gb|EDP16754.1| hypothetical protein CLOBOL_02898 [Clostridium bolteae ATCC BAA-613] Length = 1186 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANKLVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGASMQ 62 >gi|94984929|ref|YP_604293.1| SMC protein-like protein [Deinococcus geothermalis DSM 11300] gi|94555210|gb|ABF45124.1| SMC protein [Deinococcus geothermalis DSM 11300] Length = 1100 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 26/44 (59%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L I + F+ F + ++EF ++ V G NG GKS++ EA+ W Sbjct: 2 LQSITLQGFKSFADRTRLEFGPGVSAVIGPNGSGKSNVVEALRW 45 >gi|303390903|ref|XP_003073682.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] gi|303302829|gb|ADM12322.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] Length = 1014 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 29/45 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I + +F+ F + +EF +++ I+ G+NG GKSS+ AI ++ G Sbjct: 6 IRLKNFKSFKDETLVEFTENVNIIVGRNGSGKSSIVSAIRFVLCG 50 >gi|282163298|ref|YP_003355683.1| chromosome segregation protein SMC [Methanocella paludicola SANAE] gi|282155612|dbj|BAI60700.1| chromosome segregation protein SMC [Methanocella paludicola SANAE] Length = 1173 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 27/40 (67%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +IE+++F+ F KI F D T ++G NG GKS++ ++I Sbjct: 5 EIELNNFKSFGRKAKIPFFDDFTTISGPNGSGKSNVIDSI 44 >gi|257784654|ref|YP_003179871.1| chromosome segregation protein SMC [Atopobium parvulum DSM 20469] gi|257473161|gb|ACV51280.1| chromosome segregation protein SMC [Atopobium parvulum DSM 20469] Length = 1179 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + ++ F LT+V G NG GKS++S+AI W+ + + G +++ Sbjct: 3 LKSLTLKGFKSFADKTQMVFDPGLTVVVGPNGSGKSNVSDAILWVLGEQSAKMLRGQAME 62 >gi|298252087|ref|ZP_06975890.1| chromosome segregation protein SMC [Ktedonobacter racemifer DSM 44963] gi|297546679|gb|EFH80547.1| chromosome segregation protein SMC [Ktedonobacter racemifer DSM 44963] Length = 1258 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ F+ F +EF+ +T V G NG GKS++++A+ W+ R+ G Sbjct: 6 LEMLGFKSFASRTVLEFSPGITAVVGPNGSGKSNVADAMRWVLGEQNMRQLRG 58 >gi|331013368|gb|EGH93424.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 1162 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|330939978|gb|EGH43179.1| chromosome segregation protein SMC [Pseudomonas syringae pv. pisi str. 1704B] Length = 1162 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|297184040|gb|ADI20160.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L06A09] Length = 1151 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|302185112|ref|ZP_07261785.1| chromosome segregation protein SMC [Pseudomonas syringae pv. syringae 642] Length = 1162 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|298486338|ref|ZP_07004401.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159345|gb|EFI00403.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1162 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|148270285|ref|YP_001244745.1| SMC domain-containing protein [Thermotoga petrophila RKU-1] gi|281412591|ref|YP_003346670.1| SMC domain protein [Thermotoga naphthophila RKU-10] gi|147735829|gb|ABQ47169.1| SMC domain protein [Thermotoga petrophila RKU-1] gi|281373694|gb|ADA67256.1| SMC domain protein [Thermotoga naphthophila RKU-10] Length = 852 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F G + IEF +T+V G NG GKSSL EAI + +G Sbjct: 6 LTVRNFLGLKNVD-IEFQSGITVVEGPNGAGKSSLFEAISFALFG 49 >gi|260437030|ref|ZP_05790846.1| SMC family protein [Butyrivibrio crossotus DSM 2876] gi|292810339|gb|EFF69544.1| SMC family protein [Butyrivibrio crossotus DSM 2876] Length = 1190 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G ++ Sbjct: 3 LKKIEVQGFKSFANKLLFEFDNGITGIVGPNGSGKSNIADAVRWVLGEQSAKQLRGSKME 62 >gi|253701893|ref|YP_003023082.1| chromosome segregation protein SMC [Geobacter sp. M21] gi|251776743|gb|ACT19324.1| chromosome segregation protein SMC [Geobacter sp. M21] Length = 1176 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KIKRLEIHGFKSFQDKAVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|197117352|ref|YP_002137779.1| chromosome segregation ATPase SMC [Geobacter bemidjiensis Bem] gi|197086712|gb|ACH37983.1| chromosome segregation ATPase SMC [Geobacter bemidjiensis Bem] Length = 1176 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S+ Sbjct: 2 KIKRLEIHGFKSFQDKAVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|118594796|ref|ZP_01552143.1| Chromosome segregation protein SMC [Methylophilales bacterium HTCC2181] gi|118440574|gb|EAV47201.1| Chromosome segregation protein SMC [Methylophilales bacterium HTCC2181] Length = 1164 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I+++ F+ F + I+ L + G NG GKS++ E+++W+ + + G+S+ Sbjct: 2 KLRQIKLAGFKTFVDPTTIKLDGELAGIVGPNGCGKSNIMESVKWVLGSSSAKDMRGESM 61 >gi|18310698|ref|NP_562632.1| chromosome segregation protein SMC [Clostridium perfringens str. 13] gi|18145379|dbj|BAB81422.1| chromosome partition protein [Clostridium perfringens str. 13] Length = 1185 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|326800666|ref|YP_004318485.1| chromosome segregation protein SMC [Sphingobacterium sp. 21] gi|326551430|gb|ADZ79815.1| chromosome segregation protein SMC [Sphingobacterium sp. 21] Length = 1181 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ QR K+ S Sbjct: 2 QLTRLEIKGFKSFGDKITINFNEGVTAIVGPNGCGKSNVVDAIRWVL--GEQRTKNLRSE 59 Query: 88 KKRSI 92 K +I Sbjct: 60 KMENI 64 >gi|330801344|ref|XP_003288688.1| hypothetical protein DICPUDRAFT_15107 [Dictyostelium purpureum] gi|325081251|gb|EGC34773.1| hypothetical protein DICPUDRAFT_15107 [Dictyostelium purpureum] Length = 1040 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 7 KNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTE-----IQKIEFADHLTIVNGQNGY 61 KN + + + RK+ ++ +I++++F G + ++ E + + ++ GQ G Sbjct: 368 KNILSSVKEPTIVPLGRKV--QIQNIKVNNFCGISNELELNLKDEEMLNKMILIRGQMGT 425 Query: 62 GKSSLSEAIEWLFYGYTQRRKHGDS 86 GKS++ EA+ W YG T +K S Sbjct: 426 GKSTIFEALVWCLYGNTSPKKQSTS 450 >gi|291527953|emb|CBK93539.1| condensin subunit Smc [Eubacterium rectale M104/1] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S++ Sbjct: 3 LKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGASMQ 62 >gi|291524527|emb|CBK90114.1| condensin subunit Smc [Eubacterium rectale DSM 17629] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S++ Sbjct: 3 LKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGASMQ 62 >gi|168217003|ref|ZP_02642628.1| chromosome segregation protein SMC [Clostridium perfringens NCTC 8239] gi|182380903|gb|EDT78382.1| chromosome segregation protein SMC [Clostridium perfringens NCTC 8239] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|110803965|ref|YP_699003.1| chromosome segregation protein SMC [Clostridium perfringens SM101] gi|110684466|gb|ABG87836.1| chromosome segregation protein SMC [Clostridium perfringens SM101] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|328955641|ref|YP_004372974.1| condensin subunit Smc [Coriobacterium glomerans PW2] gi|328455965|gb|AEB07159.1| condensin subunit Smc [Coriobacterium glomerans PW2] Length = 1179 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + + F L ++ G NG GKS++S+AI W+ + R+ G +++ Sbjct: 3 LKSLTLKGFKSFADRAHMVFEPGLAVIVGPNGSGKSNISDAILWVLGEQSARQLRGQAME 62 >gi|308180321|ref|YP_003924449.1| hypothetical protein LPST_C1136 [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045812|gb|ADN98355.1| hypothetical protein LPST_C1136 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 826 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 7 LEIAGFGKFQQ-QQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|289626388|ref|ZP_06459342.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649543|ref|ZP_06480886.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. 2250] gi|330866313|gb|EGH01022.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|254556352|ref|YP_003062769.1| hypothetical protein JDM1_1185 [Lactobacillus plantarum JDM1] gi|254045279|gb|ACT62072.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 826 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 7 LEIAGFGKFQQ-QQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|239624035|ref|ZP_04667066.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522066|gb|EEQ61932.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANKLLFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGASMQ 62 >gi|168214193|ref|ZP_02639818.1| chromosome segregation protein SMC [Clostridium perfringens CPE str. F4969] gi|170714289|gb|EDT26471.1| chromosome segregation protein SMC [Clostridium perfringens CPE str. F4969] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|169342728|ref|ZP_02863769.1| chromosome segregation protein SMC [Clostridium perfringens C str. JGS1495] gi|169299234|gb|EDS81304.1| chromosome segregation protein SMC [Clostridium perfringens C str. JGS1495] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|160944263|ref|ZP_02091492.1| hypothetical protein FAEPRAM212_01772 [Faecalibacterium prausnitzii M21/2] gi|158444445|gb|EDP21449.1| hypothetical protein FAEPRAM212_01772 [Faecalibacterium prausnitzii M21/2] Length = 373 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ ++R ++E LT++ G NG GK++L EAI WL G R D+ Sbjct: 2 RLLSLEVQNYRNICA-ARLEPGRELTVICGNNGQGKTNLLEAI-WLLTGGKSFRGGKDA 58 >gi|28378145|ref|NP_785037.1| hypothetical protein lp_1417 [Lactobacillus plantarum WCFS1] gi|28270980|emb|CAD63884.1| unknown [Lactobacillus plantarum WCFS1] Length = 826 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 7 LEIAGFGKFQQ-QQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|320323493|gb|EFW79578.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. B076] gi|320329464|gb|EFW85456.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. race 4] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|309806874|ref|ZP_07700861.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 03V1-b] gi|308166740|gb|EFO68932.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 03V1-b] Length = 243 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 32/55 (58%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 8 LNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|283768638|ref|ZP_06341550.1| putative recombination protein F [Bulleidia extructa W1219] gi|283105030|gb|EFC06402.1| putative recombination protein F [Bulleidia extructa W1219] Length = 359 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +E+SH+R + +Q + F +L ++ G+N GK++L EA+ +L Sbjct: 6 LELSHYRNYHHLQ-VSFQPYLNVIVGKNAQGKTNLIEALYYL 46 >gi|256838545|ref|ZP_05544055.1| SMC domain-containing protein [Parabacteroides sp. D13] gi|256739464|gb|EEU52788.1| SMC domain-containing protein [Parabacteroides sp. D13] Length = 693 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Y+ ++ + +I+IS+FR F + + F + + ++ G N GKS+L AI L GY+ Sbjct: 6 YFGKEYNMYIKEIKISNFRNFRD-ASVPFHEGVNVIIGHNNTGKSNLLRAIG-LVLGYSD 63 Query: 80 RRKHG 84 R+ G Sbjct: 64 GRRLG 68 >gi|225620807|ref|YP_002722065.1| chromosome partition protein SmC [Brachyspira hyodysenteriae WA1] gi|225215627|gb|ACN84361.1| chromosome partition protein SmC [Brachyspira hyodysenteriae WA1] Length = 952 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R DS K Sbjct: 5 NLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDSAK 62 >gi|70729273|ref|YP_259010.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] gi|68343572|gb|AAY91178.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|15644384|ref|NP_229436.1| hypothetical protein TM1636 [Thermotoga maritima MSB8] gi|18203590|sp|Q9X1X1|RAD50_THEMA RecName: Full=Probable DNA double-strand break repair rad50 ATPase gi|4982209|gb|AAD36703.1|AE001806_13 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 852 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F G + IEF +T+V G NG GKSSL EAI + +G Sbjct: 6 LTVRNFLGLKNVD-IEFQSGITVVEGPNGAGKSSLFEAISFALFG 49 >gi|121582966|ref|YP_973408.1| SMC domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120596228|gb|ABM39666.1| SMC domain protein [Polaromonas naphthalenivorans CJ2] Length = 1041 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + I FR + + EF D + ++ NG GK+SL EAIE + G +R Sbjct: 197 LRKLSIQQFRRIHQSTEFEFGD-VNLITAPNGMGKTSLLEAIEAFYCGRVRR 247 >gi|331015923|gb|EGH95979.1| chromosome segregation protein SMC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|325837634|ref|ZP_08166481.1| chromosome segregation protein SMC [Turicibacter sp. HGF1] gi|325490936|gb|EGC93235.1| chromosome segregation protein SMC [Turicibacter sp. HGF1] Length = 1191 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE F+ F + +EF +T V G NG GKS++S++I W+ Sbjct: 6 IETIGFKSFADKTVVEFERGVTAVVGPNGSGKSNISDSIRWVL 48 >gi|313206051|ref|YP_004045228.1| DNA sulfur modification protein dndd [Riemerella anatipestifer DSM 15868] gi|312445367|gb|ADQ81722.1| DNA sulfur modification protein DndD [Riemerella anatipestifer DSM 15868] gi|315022364|gb|EFT35392.1| DNA repair ATPase [Riemerella anatipestifer RA-YM] Length = 705 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 4/50 (8%) Query: 31 DIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +IE+++FR + I KI ++ +V+G+NG+GK++ ++ W YG Sbjct: 5 EIELNNFRIYKGINKINLLPQDGKNIIVVSGKNGFGKTTFLMSLVWCLYG 54 >gi|293374744|ref|ZP_06621052.1| chromosome segregation protein SMC [Turicibacter sanguinis PC909] gi|292646658|gb|EFF64660.1| chromosome segregation protein SMC [Turicibacter sanguinis PC909] Length = 1191 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE F+ F + +EF +T V G NG GKS++S++I W+ Sbjct: 6 IETIGFKSFADKTVVEFERGVTAVVGPNGSGKSNISDSIRWVL 48 >gi|254511435|ref|ZP_05123502.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium KLH11] gi|221535146|gb|EEE38134.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium KLH11] Length = 1151 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LKLTGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|213968902|ref|ZP_03397042.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] gi|301385374|ref|ZP_07233792.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato Max13] gi|302063630|ref|ZP_07255171.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato K40] gi|302133899|ref|ZP_07259889.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926201|gb|EEB59756.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|168210651|ref|ZP_02636276.1| chromosome segregation protein SMC [Clostridium perfringens B str. ATCC 3626] gi|170711287|gb|EDT23469.1| chromosome segregation protein SMC [Clostridium perfringens B str. ATCC 3626] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|28870813|ref|NP_793432.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854062|gb|AAO57127.1| chromosome segregation SMC protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|77458026|ref|YP_347531.1| condensin subunit Smc [Pseudomonas fluorescens Pf0-1] gi|77382029|gb|ABA73542.1| putative chromosome partition protein [Pseudomonas fluorescens Pf0-1] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|209963842|ref|YP_002296757.1| SMC family protein [Rhodospirillum centenum SW] gi|209957308|gb|ACI97944.1| SMC family protein [Rhodospirillum centenum SW] Length = 1175 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IS F+ F + +++ +T + G NG GKS+L EA+ W+ G T +K Sbjct: 6 LRISGFKSFVDATELQIEPGMTGIVGPNGCGKSNLVEALRWVM-GETSAKK 55 >gi|148380046|ref|YP_001254587.1| hypothetical protein CBO2090 [Clostridium botulinum A str. ATCC 3502] gi|153931048|ref|YP_001384342.1| hypothetical protein CLB_2027 [Clostridium botulinum A str. ATCC 19397] gi|153937844|ref|YP_001387879.1| hypothetical protein CLC_2032 [Clostridium botulinum A str. Hall] gi|148289530|emb|CAL83630.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152927092|gb|ABS32592.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 19397] gi|152933758|gb|ABS39257.1| conserved hypothetical protein [Clostridium botulinum A str. Hall] Length = 679 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 1/43 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI++FR + ++ IEF + L I+ G+N GK+++ A+E++F Sbjct: 6 LEINNFRCYEDVD-IEFNEGLNIIIGENNCGKTTIMRALEYIF 47 >gi|330879148|gb|EGH13297.1| chromosome segregation protein SMC [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|330808454|ref|YP_004352916.1| chromosome partition protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376562|gb|AEA67912.1| Putative chromosome partition protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|260429350|ref|ZP_05783327.1| chromosome segregation protein SMC [Citreicella sp. SE45] gi|260419973|gb|EEX13226.1| chromosome segregation protein SMC [Citreicella sp. SE45] Length = 1169 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 I + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 18 ILHFSRLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWV 65 >gi|182625841|ref|ZP_02953607.1| chromosome segregation protein SMC [Clostridium perfringens D str. JGS1721] gi|177908875|gb|EDT71367.1| chromosome segregation protein SMC [Clostridium perfringens D str. JGS1721] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|330963252|gb|EGH63512.1| chromosome segregation protein SMC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|330960231|gb|EGH60491.1| chromosome segregation protein SMC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|330897712|gb|EGH29131.1| chromosome segregation protein SMC [Pseudomonas syringae pv. japonica str. M301072PT] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|292490173|ref|YP_003525612.1| DNA replication and repair protein RecF [Nitrosococcus halophilus Nc4] gi|291578768|gb|ADE13225.1| DNA replication and repair protein RecF [Nitrosococcus halophilus Nc4] Length = 362 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 32 IEISHF--RGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I+H R F ++ IEF A L I G NG GK+SL EAI L G + R S+ Sbjct: 1 MHIAHLDIRNFRNLEHIEFYPAKGLNIFTGANGSGKTSLLEAIYLLGLGRSFRSSQLASV 60 Query: 88 KKRSIKT 94 + ++K+ Sbjct: 61 VRGNMKS 67 >gi|168207933|ref|ZP_02633938.1| chromosome segregation protein SMC [Clostridium perfringens E str. JGS1987] gi|170660747|gb|EDT13430.1| chromosome segregation protein SMC [Clostridium perfringens E str. JGS1987] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|110800938|ref|YP_696403.1| chromosome segregation protein SMC [Clostridium perfringens ATCC 13124] gi|110675585|gb|ABG84572.1| chromosome segregation protein SMC [Clostridium perfringens ATCC 13124] Length = 1185 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ Sbjct: 3 LKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVL 48 >gi|71733473|ref|YP_274011.1| chromosome segregation protein SMC [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554026|gb|AAZ33237.1| chromosome segregation protein SMC [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|66045061|ref|YP_234902.1| SMC protein, N-terminal:structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Pseudomonas syringae pv. syringae B728a] gi|63255768|gb|AAY36864.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Pseudomonas syringae pv. syringae B728a] Length = 1162 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|319940193|ref|ZP_08014546.1| DNA replication and repair protein recF [Streptococcus anginosus 1_2_62CV] gi|319810664|gb|EFW06994.1| DNA replication and repair protein recF [Streptococcus anginosus 1_2_62CV] Length = 365 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L +++I HFR + E +I+F L I GQN GK+++ EAI +L + R + Sbjct: 3 LKNLQIQHFRNY-EATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|282852317|ref|ZP_06261659.1| DNA replication and repair protein RecF [Lactobacillus gasseri 224-1] gi|282556059|gb|EFB61679.1| DNA replication and repair protein RecF [Lactobacillus gasseri 224-1] Length = 177 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + E+ FR F E+ K +F H+ I G N GK++L EAI +L Sbjct: 3 LANFELKDFRNFKEL-KTDFDPHVNIFIGPNAQGKTNLLEAIYFL 46 >gi|254486515|ref|ZP_05099720.1| chromosome segregation protein SMC [Roseobacter sp. GAI101] gi|214043384|gb|EEB84022.1| chromosome segregation protein SMC [Roseobacter sp. GAI101] Length = 1156 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 11 LRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWV 52 >gi|254448680|ref|ZP_05062138.1| chromosome segregation protein SMC [gamma proteobacterium HTCC5015] gi|198261688|gb|EDY85975.1| chromosome segregation protein SMC [gamma proteobacterium HTCC5015] Length = 1168 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I F +LT + G NG GKS+ +A+ W+ + + G S+ Sbjct: 2 RLSKIKLAGFKSFVDPTTIAFPTNLTGIIGPNGCGKSNTIDAVRWVMGESSAKHLRGASM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|163733899|ref|ZP_02141341.1| chromosome segregation protein, putative [Roseobacter litoralis Och 149] gi|161393010|gb|EDQ17337.1| chromosome segregation protein, putative [Roseobacter litoralis Och 149] Length = 1151 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|110678649|ref|YP_681656.1| chromosome segregation protein, putative [Roseobacter denitrificans OCh 114] gi|109454765|gb|ABG30970.1| chromosome segregation protein, putative [Roseobacter denitrificans OCh 114] Length = 1169 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 24 LRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWV 65 >gi|329846729|ref|ZP_08262002.1| recF/RecN/SMC N terminal domain protein [Asticcacaulis biprosthecum C19] gi|328844236|gb|EGF93804.1| recF/RecN/SMC N terminal domain protein [Asticcacaulis biprosthecum C19] Length = 1057 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 32 IEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I++ FR F ++ + A + IV+G NG GKSSL + +EW G Sbjct: 36 IQLKEFRNFGDLTIDLPAAPGVMIVHGTNGLGKSSLFDGLEWALTG 81 >gi|325126040|gb|ADY85370.1| Chromosome segregation protein Smc [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 62 >gi|313124069|ref|YP_004034328.1| condensin subunit smc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280632|gb|ADQ61351.1| Condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 62 >gi|300811714|ref|ZP_07092188.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497290|gb|EFK32338.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 62 >gi|116514342|ref|YP_813248.1| chromosome segregation ATPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093657|gb|ABJ58810.1| condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 62 >gi|148654508|ref|YP_001274713.1| chromosome segregation protein SMC [Roseiflexus sp. RS-1] gi|148566618|gb|ABQ88763.1| condensin subunit Smc [Roseiflexus sp. RS-1] Length = 1201 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F EF +T V G NG GKS+L +AI W+ Sbjct: 3 LRRLEIQGFKTFAGHTLFEFQPGITAVVGPNGSGKSNLVDAIRWVL 48 >gi|325685924|gb|EGD27989.1| cell division protein Smc [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 1186 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 62 >gi|300870602|ref|YP_003785473.1| chromosome partition protein SmC [Brachyspira pilosicoli 95/1000] gi|300688301|gb|ADK30972.1| chromosome partition protein SmC, putative [Brachyspira pilosicoli 95/1000] Length = 952 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R DS K Sbjct: 5 NLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDSSK 62 >gi|50084058|ref|YP_045568.1| putative chromosome segregation ATPase [Acinetobacter sp. ADP1] gi|49530034|emb|CAG67746.1| putative chromosome segregation ATPases [Acinetobacter sp. ADP1] Length = 1149 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++++ F+ F + + F + T V G NG GKS++ +AI W+ R+ G S+ Sbjct: 2 RLSSLKLAGFKSFADSATLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|104774252|ref|YP_619232.1| chromosome partition protein SMC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423333|emb|CAI98180.1| Chromosome partition protein SMC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 1181 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 6 FKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMK 57 >gi|184157182|ref|YP_001845521.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii ACICU] gi|183208776|gb|ACC56174.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii ACICU] gi|322507079|gb|ADX02533.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii 1656-2] Length = 573 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I +L I+++HFRG I+ I D LT++ G+NG KS++ I +F Sbjct: 5 ITQLKKIKVNHFRGLKNIE-INLGDRLTVICGKNGTSKSTILGMIAQIF 52 >gi|323484229|ref|ZP_08089598.1| hypothetical protein HMPREF9474_01349 [Clostridium symbiosum WAL-14163] gi|323402471|gb|EGA94800.1| hypothetical protein HMPREF9474_01349 [Clostridium symbiosum WAL-14163] Length = 641 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANRILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGSMQ 62 >gi|312962452|ref|ZP_07776943.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] gi|311283379|gb|EFQ61969.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] Length = 1162 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|229591995|ref|YP_002874114.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] gi|229363861|emb|CAY51329.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] Length = 1162 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|89052865|ref|YP_508316.1| chromosome segregation protein SMC [Jannaschia sp. CCS1] gi|88862414|gb|ABD53291.1| Chromosome segregation protein SMC [Jannaschia sp. CCS1] Length = 1151 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 2 RFTKLRLNGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|310657320|ref|YP_003935041.1| DNA replication and repair protein recf [Clostridium sticklandii DSM 519] gi|308824098|emb|CBH20136.1| DNA replication and repair protein recF [Clostridium sticklandii] Length = 361 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +I +S+FR +++ + F+++L ++ G+NG GK++L EAI L G + R Sbjct: 5 NITLSNFRNYSKAEA-NFSENLNLIIGKNGQGKTNLIEAIYMLSLGRSFR 53 >gi|302338382|ref|YP_003803588.1| chromosome segregation protein SMC [Spirochaeta smaragdinae DSM 11293] gi|301635567|gb|ADK80994.1| chromosome segregation protein SMC [Spirochaeta smaragdinae DSM 11293] Length = 941 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+I F+ F + IEF D ++ + G NG GKS++ ++I+W+ Sbjct: 3 LKSIQIFGFKSFADRSVIEFRDGISALLGPNGCGKSNVVDSIKWVL 48 >gi|297623341|ref|YP_003704775.1| SMC domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164521|gb|ADI14232.1| SMC domain protein [Truepera radiovictrix DSM 17093] Length = 930 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+ F F E+ + F D L ++G G GKS+L +A+ + YG T R Sbjct: 4 LRLELQGFGCFREVTAVSFDDLELFAISGPTGAGKSTLLDAMTYALYGSTAR 55 >gi|330986169|gb|EGH84272.1| chromosome segregation protein SMC [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1013 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 57 >gi|283786307|ref|YP_003366172.1| hypothetical protein ROD_26321 [Citrobacter rodentium ICC168] gi|282949761|emb|CBG89380.1| hypothetical prophage protein [Citrobacter rodentium ICC168] Length = 595 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I KL I + FRG I IEF LT++ G+NG KS++ I +F Sbjct: 23 ITKLKKINVVKFRGLKNIN-IEFGSRLTVICGKNGTSKSTILGIIAQIF 70 >gi|315652048|ref|ZP_07905049.1| chromosome segregation protein Smc [Eubacterium saburreum DSM 3986] gi|315485695|gb|EFU76076.1| chromosome segregation protein Smc [Eubacterium saburreum DSM 3986] Length = 1185 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 IEI F+ F +F + +T + G NG GKS++S+A+ W+ + ++ G +++ Sbjct: 6 IEIQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVSDAVRWVLGEQSAKQLRGGNMQ 62 >gi|307244211|ref|ZP_07526326.1| chromosome segregation protein SMC [Peptostreptococcus stomatis DSM 17678] gi|306492361|gb|EFM64399.1| chromosome segregation protein SMC [Peptostreptococcus stomatis DSM 17678] Length = 1183 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F I F +T V G NG GKS++S+AI W+ Sbjct: 3 LKKLELKGFKSFPTKTDIYFDKGVTAVVGPNGSGKSNISDAIRWVL 48 >gi|315651218|ref|ZP_07904248.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315486514|gb|EFU76866.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 1085 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 7/45 (15%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 F D L ++ NG+GKS+L+ I+ +FYG+ + I KRSI Sbjct: 21 FVDGLNVIQEHNGFGKSTLAAFIKAMFYGFPR-------IGKRSI 58 >gi|307320645|ref|ZP_07600058.1| SMC domain protein [Sinorhizobium meliloti AK83] gi|306893680|gb|EFN24453.1| SMC domain protein [Sinorhizobium meliloti AK83] Length = 1018 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFR--GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E S+FR G + + K+ +T++ G NG GK+S + +EW G R Sbjct: 6 LRSVEFSNFRVYGDSYVFKLPAEPGVTLITGANGLGKTSFFDGVEWALTGQVSR 59 >gi|262274034|ref|ZP_06051846.1| hypothetical ATP-dependent endonuclease of the OLD family [Grimontia hollisae CIP 101886] gi|262221844|gb|EEY73157.1| hypothetical ATP-dependent endonuclease of the OLD family [Grimontia hollisae CIP 101886] Length = 543 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 4/44 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 KL IEIS FRG I+++ + D LT++ G+N +GKSSL +A+ Sbjct: 2 KLDRIEISGFRG---IRRLSLSMDELTVLIGENAWGKSSLLDAL 42 >gi|166363849|ref|YP_001656122.1| chromosome segregation protein [Microcystis aeruginosa NIES-843] gi|166086222|dbj|BAG00930.1| chromosome segregation protein [Microcystis aeruginosa NIES-843] Length = 1176 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 VELSHFKSFGGTTPIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|119503163|ref|ZP_01625247.1| chromosome segregation protein [marine gamma proteobacterium HTCC2080] gi|119460809|gb|EAW41900.1| chromosome segregation protein [marine gamma proteobacterium HTCC2080] Length = 1165 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+++ Sbjct: 2 RLKSIKLAGFKSFVDPTTVNFPSNMCSVVGPNGCGKSNIIDAVRWVLGESSAKNLRGEAM 61 >gi|218666509|ref|YP_002425241.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 23270] gi|28374984|emb|CAD66591.1| SMC protein [Acidithiobacillus ferrooxidans] gi|218518722|gb|ACK79308.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1150 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I + F+ F E +I+F + ++ G NG GKS+ +A+ W+ + R+ G ++ Sbjct: 2 RLSAIILQGFKSFRESTRIQFNANPVVIIGPNGCGKSNTVDAVRWVLGESSARQLRGGTL 61 >gi|83589043|ref|YP_429052.1| hypothetical protein Moth_0173 [Moorella thermoacetica ATCC 39073] gi|83571957|gb|ABC18509.1| hypothetical protein Moth_0173 [Moorella thermoacetica ATCC 39073] Length = 729 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +I + F+ F + Q I + I+ G NG+GK+S EA+E + G + R +S Sbjct: 6 RIKEITLEGFKCFFKKQSINCDADVIILTGNNGFGKTSFIEALELMATGKIEPRIGENST 65 Query: 88 KK 89 K+ Sbjct: 66 KR 67 >gi|307822263|ref|ZP_07652495.1| conserved hypothetical protein [Methylobacter tundripaludum SV96] gi|307736829|gb|EFO07674.1| conserved hypothetical protein [Methylobacter tundripaludum SV96] Length = 572 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K I I +FR Q+IE +TIV G N GK+++ +AIE +F GY + Sbjct: 2 KFEAIRIKNFRTIEGEQEIELGHGITIV-GPNSSGKTNILKAIEMVFTGYENK 53 >gi|254495860|ref|ZP_05108771.1| chromosome segregation SMC protein [Legionella drancourtii LLAP12] gi|254354926|gb|EET13550.1| chromosome segregation SMC protein [Legionella drancourtii LLAP12] Length = 1164 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + R G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTVVYFPSQLVAVVGPNGCGKSNIIDAVRWVMGESSARNLRGESM 61 >gi|256391659|ref|YP_003113223.1| hypothetical protein Caci_2464 [Catenulispora acidiphila DSM 44928] gi|256357885|gb|ACU71382.1| hypothetical protein Caci_2464 [Catenulispora acidiphila DSM 44928] Length = 1051 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL I +++FRG + +++ FA+H +T+V G N GKSS EA L DS Sbjct: 2 RLLRIRLTNFRGVAD-RELTFAEHGVTVVEGPNESGKSSTIEAFGLLL-------DELDS 53 Query: 87 IKKRSIKTPMP 97 +K +++ P Sbjct: 54 SRKEAVRAVKP 64 >gi|223986251|ref|ZP_03636266.1| hypothetical protein HOLDEFILI_03576 [Holdemania filiformis DSM 12042] gi|223961777|gb|EEF66274.1| hypothetical protein HOLDEFILI_03576 [Holdemania filiformis DSM 12042] Length = 979 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + I+F +T + G NG GKS++++AI W+ + + G+++ Sbjct: 6 IEMQGFKSFADKVVIQFDHDVTGIVGPNGCGKSNITDAIRWVLGEQSVKSLRGNAM 61 >gi|169824399|ref|YP_001692010.1| putative DNA double-strand break repair rad50 ATPase [Finegoldia magna ATCC 29328] gi|167831204|dbj|BAG08120.1| putative DNA double-strand break repair rad50 ATPase [Finegoldia magna ATCC 29328] Length = 750 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I +L I F +T IEF D ++ G N GK+++S+ IE +FYG+ + Sbjct: 3 IIRLDLISFGRFNNYT----IEFGDKFNLIYGLNESGKTTISKFIEGVFYGFVK 52 >gi|114799181|ref|YP_760618.1| chromosome segregation protein SMC [Hyphomonas neptunium ATCC 15444] gi|114739355|gb|ABI77480.1| chromosome segregation protein SMC [Hyphomonas neptunium ATCC 15444] Length = 1153 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++ ++ I+ F+ F + Q + LT + G NG GKS+L EA+ W Sbjct: 2 QITELRIAGFKSFVDPQTVPIEPGLTGIVGPNGCGKSNLLEALRW 46 >gi|331002415|ref|ZP_08325933.1| chromosome segregation protein SMC [Lachnospiraceae oral taxon 107 str. F0167] gi|330410231|gb|EGG89665.1| chromosome segregation protein SMC [Lachnospiraceae oral taxon 107 str. F0167] Length = 1185 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 IEI F+ F +F + +T + G NG GKS++S+A+ W+ + ++ G +++ Sbjct: 6 IEIQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVSDAVRWVLGEQSAKQLRGGNMQ 62 >gi|309805556|ref|ZP_07699601.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165207|gb|EFO67445.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 09V1-c] Length = 296 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 32/55 (58%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 8 LNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|289550986|ref|YP_003471890.1| Chromosome partition protein smc [Staphylococcus lugdunensis HKU09-01] gi|289180518|gb|ADC87763.1| Chromosome partition protein smc [Staphylococcus lugdunensis HKU09-01] Length = 1189 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F E ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFAEHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|227514122|ref|ZP_03944171.1| recombination protein F [Lactobacillus fermentum ATCC 14931] gi|260662541|ref|ZP_05863436.1| DNA replication and repair protein RecF [Lactobacillus fermentum 28-3-CHN] gi|227087493|gb|EEI22805.1| recombination protein F [Lactobacillus fermentum ATCC 14931] gi|260553232|gb|EEX26175.1| DNA replication and repair protein RecF [Lactobacillus fermentum 28-3-CHN] gi|299782688|gb|ADJ40686.1| DNA replication and repair protein recF [Lactobacillus fermentum CECT 5716] Length = 373 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++++SH+R + E+ + FA + ++ G+N GK++L EAI L + + R Sbjct: 3 LQELQLSHYRNYEEL-AVTFAPGINVLIGENAQGKTNLLEAIYLLAFTKSHR 53 >gi|159030905|emb|CAO88586.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1176 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+SHF+ F I F T+V+G NG GKS++ +A+ Sbjct: 7 VELSHFKSFGGTTPIPFLPGFTVVSGPNGSGKSNILDAL 45 >gi|269120738|ref|YP_003308915.1| chromosome segregation protein SMC [Sebaldella termitidis ATCC 33386] gi|268614616|gb|ACZ08984.1| chromosome segregation protein SMC [Sebaldella termitidis ATCC 33386] Length = 1175 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F E I+F + +T + G NG GKS++ +AI W+ Sbjct: 6 LELNGFKSFAEKTVIDFTNGITSIVGPNGSGKSNILDAILWVL 48 >gi|269118645|ref|YP_003306822.1| DNA replication and repair protein RecF [Sebaldella termitidis ATCC 33386] gi|268612523|gb|ACZ06891.1| DNA replication and repair protein RecF [Sebaldella termitidis ATCC 33386] Length = 362 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + +++FR E +KIEF ++ G+NG GK+SL EA+ +L G + R K Sbjct: 2 KLKQLSLNNFRCL-ENKKIEFDPDFNLIYGKNGQGKTSLIEAVYFLATGKSFRTK 55 >gi|186471653|ref|YP_001862971.1| initiation factor 2 associated domain-containing protein [Burkholderia phymatum STM815] gi|184197962|gb|ACC75925.1| Initiation factor 2 associated domain protein [Burkholderia phymatum STM815] Length = 680 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 3/52 (5%) Query: 22 ARKLIF-KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 A+KL + KL +EI++F+ + ++ +D +TI+ G NG GKSS+ +AI W Sbjct: 112 AKKLRWTKLASVEITNFKAVKNL-RVPLSD-VTILVGPNGSGKSSVLQAIHW 161 >gi|184154480|ref|YP_001842820.1| recombination protein F [Lactobacillus fermentum IFO 3956] gi|226737808|sp|B2GEV1|RECF_LACF3 RecName: Full=DNA replication and repair protein recF gi|183225824|dbj|BAG26340.1| DNA replication and repair protein RecF [Lactobacillus fermentum IFO 3956] Length = 373 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++++SH+R + E+ + FA + ++ G+N GK++L EAI L + + R Sbjct: 3 LQELQLSHYRNYEEL-AVTFAPGINVLIGENAQGKTNLLEAIYLLAFTKSHR 53 >gi|325677955|ref|ZP_08157597.1| chromosome segregation protein SMC [Ruminococcus albus 8] gi|324110509|gb|EGC04683.1| chromosome segregation protein SMC [Ruminococcus albus 8] Length = 1184 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L +E+ F+ F + + F +T V G NG GKS++S+A+ W+ + + G+ + Sbjct: 3 LRGLELQGFKSFPDKTVLSFGKGITAVVGPNGSGKSNISDAMRWVMGEQSSKALRGEKM 61 >gi|218132445|ref|ZP_03461249.1| hypothetical protein BACPEC_00304 [Bacteroides pectinophilus ATCC 43243] gi|217992555|gb|EEC58557.1| hypothetical protein BACPEC_00304 [Bacteroides pectinophilus ATCC 43243] Length = 1191 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G ++ Sbjct: 3 LKSIEVQGFKSFANKIVFEFNNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGTKME 62 >gi|124267000|ref|YP_001021004.1| putative chromosome partition protein [Methylibium petroleiphilum PM1] gi|124259775|gb|ABM94769.1| putative chromosome partition protein [Methylibium petroleiphilum PM1] Length = 1175 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|320120432|gb|EFE27625.2| SMC family protein [Filifactor alocis ATCC 35896] Length = 1180 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL IE+ F+ F KI F D L + G NG GKS++ +A W+ + + G+ Sbjct: 1 MKLKSIELKGFKSFQNKTKIVFPVDGLVSIVGPNGSGKSNVLDAFRWVLGEQSAKTLRGE 60 Query: 86 SIKK-----RSIKTPMPMC 99 ++ K P+ MC Sbjct: 61 KMEDVIFSGTQFKKPLNMC 79 >gi|291455695|ref|ZP_06595085.1| RecF protein [Bifidobacterium breve DSM 20213] gi|291382623|gb|EFE90141.1| RecF protein [Bifidobacterium breve DSM 20213] Length = 385 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILVGKNGLGKTNLVEAVEVLSTGASHR 53 >gi|172038222|ref|YP_001804723.1| hypothetical protein cce_3309 [Cyanothece sp. ATCC 51142] gi|171699676|gb|ACB52657.1| unknown [Cyanothece sp. ATCC 51142] Length = 688 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGF-TEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFY 75 KLL I++ +FR F + +I A ++ TI++G NG GK++L A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGQTPEISLACGKENTTIIHGNNGSGKTTLLNAFTWVLY 53 >gi|198283035|ref|YP_002219356.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247556|gb|ACH83149.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 53993] Length = 1150 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I + F+ F E +I+F + ++ G NG GKS+ +A+ W+ + R+ G ++ Sbjct: 2 RLSAIILQGFKSFRESTRIQFDANPVVIIGPNGCGKSNTVDAVRWVLGESSARQLRGGTL 61 >gi|317482361|ref|ZP_07941381.1| DNA replication and repair protein RecF [Bifidobacterium sp. 12_1_47BFAA] gi|316916241|gb|EFV37643.1| DNA replication and repair protein RecF [Bifidobacterium sp. 12_1_47BFAA] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|315658481|ref|ZP_07911353.1| SMC family domain protein [Staphylococcus lugdunensis M23590] gi|315496810|gb|EFU85133.1| SMC family domain protein [Staphylococcus lugdunensis M23590] Length = 1189 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F E ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFAEHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|311029997|ref|ZP_07708087.1| chromosome segregation SMC protein [Bacillus sp. m3-13] Length = 1188 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E ++F +T V G NG GKS++ +AI W+ Sbjct: 6 LEVVGFKSFAEKISVDFVPGVTAVVGPNGSGKSNIIDAIRWVL 48 >gi|302380687|ref|ZP_07269152.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|303233678|ref|ZP_07320332.1| conserved hypothetical protein [Finegoldia magna BVS033A4] gi|302311630|gb|EFK93646.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|302495112|gb|EFL54864.1| conserved hypothetical protein [Finegoldia magna BVS033A4] Length = 750 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I +L I F +T IEF D ++ G N GK+++S+ IE +FYG+ + Sbjct: 3 IIRLDLISFGRFNNYT----IEFGDKFNLIYGLNESGKTTISKFIEGVFYGFVK 52 >gi|296453190|ref|YP_003660333.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum JDM301] gi|296182621|gb|ADG99502.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum JDM301] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|291517731|emb|CBK71347.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum F8] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|239622840|ref|ZP_04665871.1| recombination protein RecF [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514837|gb|EEQ54704.1| recombination protein RecF [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|213690932|ref|YP_002321518.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790465|sp|B7GSG2|RECF_BIFLI RecName: Full=DNA replication and repair protein recF gi|213522393|gb|ACJ51140.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320456978|dbj|BAJ67599.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|168333988|ref|ZP_02692212.1| chromosome segregation protein SMC [Epulopiscium sp. 'N.t. morphotype B'] Length = 1183 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + KI +T + G NG GKS++++AI W+ Sbjct: 3 LEKIEIFGFKSFGDAVKIAVPSGITAIIGPNGSGKSNVADAIRWVL 48 >gi|23335941|ref|ZP_00121172.1| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Bifidobacterium longum DJO10A] gi|227547509|ref|ZP_03977558.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312133630|ref|YP_004000969.1| recf [Bifidobacterium longum subsp. longum BBMN68] gi|322688194|ref|YP_004207928.1| recombination protein RecF [Bifidobacterium longum subsp. infantis 157F] gi|227212024|gb|EEI79920.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311772888|gb|ADQ02376.1| RecF [Bifidobacterium longum subsp. longum BBMN68] gi|320459530|dbj|BAJ70150.1| recombination protein RecF [Bifidobacterium longum subsp. infantis 157F] Length = 412 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 6 LALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHR 53 >gi|310778882|ref|YP_003967215.1| chromosome segregation protein SMC [Ilyobacter polytropus DSM 2926] gi|309748205|gb|ADO82867.1| chromosome segregation protein SMC [Ilyobacter polytropus DSM 2926] Length = 1170 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E ++F +T + G NG GKS++ +AI W+ Sbjct: 6 VEINGFKSFAEKINLDFNTGITSIVGPNGSGKSNILDAILWVL 48 >gi|225868185|ref|YP_002744133.1| chromosome partition protein [Streptococcus equi subsp. zooepidemicus] gi|225701461|emb|CAW98598.1| putative chromosome partition protein [Streptococcus equi subsp. zooepidemicus] Length = 1183 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +I++ F+ F + +I F +T V G NG GKS+++E++ W Sbjct: 3 LKEIQMQGFKSFADKTRIIFDKGVTAVVGPNGSGKSNVTESLRW 46 >gi|195978495|ref|YP_002123739.1| chromosome partition protein Smc [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975200|gb|ACG62726.1| chromosome partition protein Smc [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 1183 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 28/44 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +I++ F+ F + +I F +T V G NG GKS+++E++ W Sbjct: 3 LKEIQMQGFKSFADKTRIIFDKGVTAVVGPNGSGKSNVTESLRW 46 >gi|110668025|ref|YP_657836.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] gi|109625772|emb|CAJ52207.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] Length = 687 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 5/79 (6%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLF 74 S +K + ++L I+++++R + + KI+ + + ++ GQNG GKS++ A+ F Sbjct: 27 STLQKKRMTEILQIKMNNYRQYEGLNKIDLSTIGNKKINVIEGQNGAGKSNILNAVSLCF 86 Query: 75 YGY-TQRRKHGDSIKKRSI 92 Y T + G+ ++ I Sbjct: 87 YNQETHQETTGEELETLPI 105 >gi|89892749|ref|YP_516236.1| DNA replication and repair protein recF [Desulfitobacterium hafniense Y51] gi|219666074|ref|YP_002456509.1| DNA replication and repair protein RecF [Desulfitobacterium hafniense DCB-2] gi|122484263|sp|Q252K0|RECF_DESHY RecName: Full=DNA replication and repair protein recF gi|254790474|sp|B8FXW8|RECF_DESHD RecName: Full=DNA replication and repair protein recF gi|89332197|dbj|BAE81792.1| DNA replication and repair protein recF [Desulfitobacterium hafniense Y51] gi|219536334|gb|ACL18073.1| DNA replication and repair protein RecF [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + FR + + Q+++F LTI+ G+NG GK+++ E I +L G + R Sbjct: 6 LHLKSFRNYQD-QEVDFRPGLTILQGENGQGKTNILEGIYYLLTGKSYR 53 >gi|86143164|ref|ZP_01061566.1| hypothetical protein MED217_08280 [Leeuwenhoekiella blandensis MED217] gi|85830069|gb|EAQ48529.1| hypothetical protein MED217_08280 [Leeuwenhoekiella blandensis MED217] Length = 700 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 K +I+I++FR + I+ ++ ++ G+NGYGK++L +I W YG Sbjct: 2 KFSNIKINNFRQYYNAVNIDLTTDTDRNIVVIGGRNGYGKTNLLLSIVWCLYG 54 >gi|302386300|ref|YP_003822122.1| chromosome segregation protein SMC [Clostridium saccharolyticum WM1] gi|302196928|gb|ADL04499.1| chromosome segregation protein SMC [Clostridium saccharolyticum WM1] Length = 1186 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEIQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|212632927|ref|YP_002309452.1| recombination protein F [Shewanella piezotolerans WP3] gi|226737834|sp|B8CH73|RECF_SHEPW RecName: Full=DNA replication and repair protein recF gi|212554411|gb|ACJ26865.1| DNA replication and repair protein RecF [Shewanella piezotolerans WP3] Length = 360 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I FR T Q ++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 6 LHIEAFRNITSAQ-LQPGDGLNVIYGQNGSGKTSILEAIYFLGMGRSFR 53 >gi|154483580|ref|ZP_02026028.1| hypothetical protein EUBVEN_01284 [Eubacterium ventriosum ATCC 27560] gi|149735490|gb|EDM51376.1| hypothetical protein EUBVEN_01284 [Eubacterium ventriosum ATCC 27560] Length = 1186 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +IEI F+ F +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKNIEIHGFKSFANKINFQFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|149186058|ref|ZP_01864372.1| chromosome segregation protein [Erythrobacter sp. SD-21] gi|148830089|gb|EDL48526.1| chromosome segregation protein [Erythrobacter sp. SD-21] Length = 1140 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E + LT V G NG GKS+L EAI W+ Sbjct: 6 LRLSGFKSFVEPSTLRIEPGLTGVVGPNGCGKSNLLEAIRWV 47 >gi|117923322|ref|YP_863939.1| ATP binding protein [Magnetococcus sp. MC-1] gi|117607078|gb|ABK42533.1| ATP binding protein [Magnetococcus sp. MC-1] Length = 454 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + +S+FR F ++ I F D+LT++ QNG GK+++ +AI Sbjct: 2 KLNTLTLSNFRCFESLE-ITFDDYLTVLVAQNGGGKTAILDAI 43 >gi|325274413|ref|ZP_08140500.1| chromosome segregation protein SMC [Pseudomonas sp. TJI-51] gi|324100448|gb|EGB98207.1| chromosome segregation protein SMC [Pseudomonas sp. TJI-51] Length = 1162 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|296875531|ref|ZP_06899603.1| recombination protein F [Streptococcus parasanguinis ATCC 15912] gi|296433455|gb|EFH19230.1| recombination protein F [Streptococcus parasanguinis ATCC 15912] Length = 364 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 3 LKQLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRN 56 >gi|255657907|ref|ZP_05403316.1| putative ABC transporter ATP-binding protein [Mitsuokella multacida DSM 20544] gi|260850099|gb|EEX70106.1| putative ABC transporter ATP-binding protein [Mitsuokella multacida DSM 20544] Length = 673 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +I K + +E +FR F ++FA ++T++ G+NG GK++L +A W YG Sbjct: 4 VIIKSMTLE--NFRQFKGESTLDFATDSHKNVTVIMGENGAGKTTLEQAFMWCLYGTNTF 61 Query: 81 R 81 R Sbjct: 62 R 62 >gi|19703785|ref|NP_603347.1| ABC transporter ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713927|gb|AAL94646.1| ABC transporter ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 671 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L I + +FR F ++ KI F ++T++ G NG GK++L+ AI W YG Sbjct: 1 MQLKSINLMNFRQFKDL-KISFPSSNDGKNVTLIFGDNGSGKTTLANAIIWCLYG 54 >gi|323692111|ref|ZP_08106357.1| chromosome segregation protein SMC [Clostridium symbiosum WAL-14673] gi|323503834|gb|EGB19650.1| chromosome segregation protein SMC [Clostridium symbiosum WAL-14673] Length = 1186 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEIQGFKSFANRILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGSMQ 62 >gi|268679582|ref|YP_003304013.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617613|gb|ACZ11978.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 789 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 IEF + L + G+NG GKS+L EAI + YG + +K + I+ S Sbjct: 19 IEFGEGLIGIIGKNGSGKSTLFEAILFALYGELRNKKFKEVIRNAS 64 >gi|104780919|ref|YP_607417.1| chromosome segregation SMC protein [Pseudomonas entomophila L48] gi|95109906|emb|CAK14611.1| Putative chromosome segregation SMC protein [Pseudomonas entomophila L48] Length = 1162 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|251777825|ref|ZP_04820745.1| gp49 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082140|gb|EES48030.1| gp49 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 655 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL +E+ +F+G E+ + F TI+ G+NG GKS++ + WL +G Sbjct: 1 MIKLKKLELKNFKGIKELT-VTFGTVTTIL-GENGTGKSTIFDGFNWLLFG 49 >gi|95929904|ref|ZP_01312645.1| Chromosome segregation protein SMC [Desulfuromonas acetoxidans DSM 684] gi|95134200|gb|EAT15858.1| Chromosome segregation protein SMC [Desulfuromonas acetoxidans DSM 684] Length = 1170 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 18/75 (24%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW--------------- 72 K+ IEI F+ F + + F +T + G NG GKS++ +AI W Sbjct: 2 KIKRIEIIGFKSFVDRTVLNFEPGVTAILGPNGCGKSNVIDAIRWAMGEQNAKNLRGQAM 61 Query: 73 ---LFYGYTQRRKHG 84 +F G +RR HG Sbjct: 62 EDVIFGGSKKRRPHG 76 >gi|227508131|ref|ZP_03938180.1| recombination protein F [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192360|gb|EEI72427.1| recombination protein F [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 373 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL DI + +FR + + Q ++F+D + + G+N GK++L EAI Y R H S Sbjct: 2 KLKDISLHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAI----YVLALTRSHRTSN 56 Query: 88 KKRSI 92 +K I Sbjct: 57 EKELI 61 >gi|222151067|ref|YP_002560221.1| hypothetical protein MCCL_0818 [Macrococcus caseolyticus JCSC5402] gi|222120190|dbj|BAH17525.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 1192 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 29/46 (63%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E + F+ F + + F + +T + G NG GKS++++AI+W+ Sbjct: 4 LQSVEATGFKSFADKTTVLFDEGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|118388954|ref|XP_001027570.1| hypothetical protein TTHERM_01284780 [Tetrahymena thermophila] gi|89309340|gb|EAS07328.1| hypothetical protein TTHERM_01284780 [Tetrahymena thermophila SB210] Length = 790 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 + + F +I K++F D + ++N QN K SL I LF Q RK D++KK I Sbjct: 249 QTTQFENGMQIYKMDFQDFMNLINNQN--EKISLQTDIFQLFVELCQARKENDNLKKEII 306 Query: 93 KTPM 96 + M Sbjct: 307 EQIM 310 >gi|218441332|ref|YP_002379661.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424] gi|218174060|gb|ACK72793.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424] Length = 1190 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+SHF+ F I F T+++G NG GKS++ +A+ Sbjct: 7 VELSHFKSFGGTTSIPFLPGFTVISGPNGSGKSNILDAL 45 >gi|312863793|ref|ZP_07724031.1| RecF/RecN/SMC N-terminal domain protein [Streptococcus vestibularis F0396] gi|311101329|gb|EFQ59534.1| RecF/RecN/SMC N-terminal domain protein [Streptococcus vestibularis F0396] Length = 527 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W Sbjct: 3 LKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRW 46 >gi|296126519|ref|YP_003633771.1| SMC domain protein [Brachyspira murdochii DSM 12563] gi|296018335|gb|ADG71572.1| SMC domain protein [Brachyspira murdochii DSM 12563] Length = 952 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R DS K Sbjct: 5 NLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDSSK 62 >gi|323489555|ref|ZP_08094782.1| chromosome partition protein smc [Planococcus donghaensis MPA1U2] gi|323396686|gb|EGA89505.1| chromosome partition protein smc [Planococcus donghaensis MPA1U2] Length = 1182 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F + I+F +T V G NG GKS++++AI W+ Sbjct: 6 LEVMGFKSFADRIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVL 48 >gi|238768522|dbj|BAH66834.1| hypothetical protein [Staphylococcus aureus] Length = 687 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR----KHGDSI 87 ++I +FR F I I+F + + ++ G N GKS+L A+ +F G +++ +S+ Sbjct: 6 VKIKNFRNFDNID-IDFHEGVNVLIGHNNSGKSNLLRALSLIFDGSVRKQLSVEDFNNSL 64 Query: 88 KKRSIKTPMP 97 K S+K P Sbjct: 65 TKESLKKEAP 74 >gi|330879783|gb|EGH13932.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. race 4] Length = 390 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|290968346|ref|ZP_06559887.1| chromosome segregation protein SMC [Megasphaera genomosp. type_1 str. 28L] gi|290781621|gb|EFD94208.1| chromosome segregation protein SMC [Megasphaera genomosp. type_1 str. 28L] Length = 1185 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 18/75 (24%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW--------------- 72 +++ +E+ F+ F + + F +T + G NG GKS++S+A+ W Sbjct: 2 QVVKMELRGFKSFADKTVLTFDRGITAIVGPNGSGKSNISDAVRWVLGEQNVRQLRGQKA 61 Query: 73 ---LFYGYTQRRKHG 84 +F G QRR G Sbjct: 62 EDVIFSGTAQRRSQG 76 >gi|227822792|ref|YP_002826764.1| hypothetical protein NGR_c22510 [Sinorhizobium fredii NGR234] gi|227341793|gb|ACP26011.1| hypothetical protein NGR_c22510 [Sinorhizobium fredii NGR234] Length = 562 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + LIF+ L++ R + +K+EF LT++ G+NG GKSSL + I W Sbjct: 2 KNLIFESLELLSLTER---KARKVEFHPLLTVITGENGVGKSSLIKHIYW 48 >gi|26990967|ref|NP_746392.1| chromosome segregation protein SMC [Pseudomonas putida KT2440] gi|24985991|gb|AAN69856.1|AE016624_7 chromosome segregation SMC protein [Pseudomonas putida KT2440] Length = 1162 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|148546830|ref|YP_001266932.1| chromosome segregation protein SMC [Pseudomonas putida F1] gi|148510888|gb|ABQ77748.1| condensin subunit Smc [Pseudomonas putida F1] Length = 1162 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|149369743|ref|ZP_01889595.1| possible ATPase involved in DNA repair [unidentified eubacterium SCB49] gi|149357170|gb|EDM45725.1| possible ATPase involved in DNA repair [unidentified eubacterium SCB49] Length = 701 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL +I+I++FR + + I+ +++ ++ G+NGYGK++ +I W YG Sbjct: 2 KLSEIKINNFRQYYKEVNIDLTTNSDENIILIGGKNGYGKTNFLISIVWCLYG 54 >gi|332667999|ref|YP_004450787.1| hypothetical protein Halhy_6092 [Haliscomenobacter hydrossis DSM 1100] gi|332336813|gb|AEE53914.1| hypothetical protein Halhy_6092 [Haliscomenobacter hydrossis DSM 1100] Length = 448 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 S AR+ F + I+++ FRGF +I F LT+ QNG GK+++ +A+ Sbjct: 6 SVEARQYRFLVDRIKLASFRGFQNEVEIHFEPDLTVFIAQNGGGKTTVLDAL 57 >gi|295091754|emb|CBK77861.1| condensin subunit Smc [Clostridium cf. saccharolyticum K10] Length = 1195 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEIQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|283798075|ref|ZP_06347228.1| SMC family protein [Clostridium sp. M62/1] gi|291074217|gb|EFE11581.1| SMC family protein [Clostridium sp. M62/1] Length = 1195 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEIQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|171059195|ref|YP_001791544.1| chromosome segregation protein SMC [Leptothrix cholodnii SP-6] gi|170776640|gb|ACB34779.1| chromosome segregation protein SMC [Leptothrix cholodnii SP-6] Length = 1170 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTHFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|47459245|ref|YP_016107.1| segregation of chromosomes protein [Mycoplasma mobile 163K] gi|47458574|gb|AAT27896.1| segregation of chromosomes protein [Mycoplasma mobile 163K] Length = 974 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ IE F+ F + + F + + G NG GKS++++AI W+ + + GD++ Sbjct: 2 KLIKIEAKGFKSFADGITLNFDGGIVGIVGPNGSGKSNINDAIRWVLGEQSFKALRGDNM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|330943475|gb|EGH45818.1| RecF/RecN/SMC N domain protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 636 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F E IEF D L ++ G+NG GK+ + AI LF Sbjct: 8 LDVDGFKCFGEPFTIEFHDGLNVLVGENGAGKTGVISAIRQLF 50 >gi|330503730|ref|YP_004380599.1| hypothetical protein MDS_2816 [Pseudomonas mendocina NK-01] gi|328918016|gb|AEB58847.1| hypothetical protein MDS_2816 [Pseudomonas mendocina NK-01] Length = 888 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL + + FRGF + + + + + G NG GK+SL E +E+ G Sbjct: 85 KLRHLTLGPFRGFRTPEPFDLSKQIILFYGPNGSGKTSLCEGLEYALLG 133 >gi|313497883|gb|ADR59249.1| Chromosome segregation protein SMC [Pseudomonas putida BIRD-1] Length = 1162 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|302342434|ref|YP_003806963.1| SMC domain protein [Desulfarculus baarsii DSM 2075] gi|301639047|gb|ADK84369.1| SMC domain protein [Desulfarculus baarsii DSM 2075] Length = 947 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I++ +FRG +++F+ +T++ NG GK++L +A E LF T+R I+ + Sbjct: 8 IKVVNFRGLAGSIELDFSSPITLIYAPNGTGKTTLLQAAELLF---TRR------IRSKR 58 Query: 92 IKTPMPMCMAVPRC 105 I M C + C Sbjct: 59 INADMNNCWSECAC 72 >gi|229918310|ref|YP_002886956.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] gi|229469739|gb|ACQ71511.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] Length = 671 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+ I++++++ + Q I F H + ++ G NG GK+++ +A+ +L YG Sbjct: 1 MKLVRIQLNNYKTYLNSQTINFDTHTDDKNIVLIGGLNGAGKTTILKAVRYLLYG 55 >gi|167034835|ref|YP_001670066.1| chromosome segregation protein SMC [Pseudomonas putida GB-1] gi|166861323|gb|ABY99730.1| chromosome segregation protein SMC [Pseudomonas putida GB-1] Length = 1162 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|170722765|ref|YP_001750453.1| chromosome segregation protein SMC [Pseudomonas putida W619] gi|169760768|gb|ACA74084.1| chromosome segregation protein SMC [Pseudomonas putida W619] Length = 1162 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|323705375|ref|ZP_08116950.1| SMC domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535277|gb|EGB25053.1| SMC domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 853 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 34 ISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +F ++E + ++F H+ + G+NG GKSSL +AI W +G Sbjct: 8 LKNFMSYSENEVMDFTRFHIAAITGKNGNGKSSLWDAITWCIWG 51 >gi|10956128|ref|NP_037556.1| hypothetical protein pMD136_p01 [Pediococcus pentosaceus] gi|5091686|gb|AAD39633.1|AF033858_16 unknown [Pediococcus pentosaceus] Length = 607 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L+ + I +FRG+ KI D LT + G+N GKS++ +A+E F Sbjct: 3 LVSVTIHNFRGYKN-TKINIDDQLTTLIGKNDVGKSTIVDALEIFF 47 >gi|296531698|ref|ZP_06894532.1| recombination protein F [Roseomonas cervicalis ATCC 49957] gi|296267973|gb|EFH13766.1| recombination protein F [Roseomonas cervicalis ATCC 49957] Length = 259 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR + ++ + F + ++ G+NG GK++L EAI L G R Sbjct: 7 LRLTRLMLQDFRSYAQLD-LRFQAGVVVIAGRNGVGKTNLLEAISLLTPGRGLRNARAGE 65 Query: 87 IKKRSIKTPMPMCMA 101 + +R + P +A Sbjct: 66 LGRREGEESRPWTIA 80 >gi|260889921|ref|ZP_05901184.1| cell division protein Smc [Leptotrichia hofstadii F0254] gi|260860527|gb|EEX75027.1| cell division protein Smc [Leptotrichia hofstadii F0254] Length = 183 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F +EF + +T + G NG GKS++ +AI W+ Sbjct: 6 LELTGFKSFANRTVVEFDNGITSIVGPNGSGKSNILDAILWVL 48 >gi|58336807|ref|YP_193392.1| hypothetical protein LBA0476 [Lactobacillus acidophilus NCFM] gi|58254124|gb|AAV42361.1| hypothetical protein LBA0476 [Lactobacillus acidophilus NCFM] Length = 582 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 D+ I +R F + IE + HLT + G NG GKS++ Sbjct: 5 DLNIKDYRAFQKETNIELSKHLTAIAGMNGVGKSTI 40 >gi|56698060|ref|YP_168431.1| SMC protein [Ruegeria pomeroyi DSS-3] gi|56679797|gb|AAV96463.1| SMC protein [Ruegeria pomeroyi DSS-3] Length = 1151 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 27/42 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++++ F+ F + + AD LT + G NG GKS+L EA+ W+ Sbjct: 6 LKLTGFKSFVDPTDLIIADGLTGIVGPNGCGKSNLLEALRWV 47 >gi|312877902|ref|ZP_07737847.1| DNA replication and repair protein RecF [Caldicellulosiruptor lactoaceticus 6A] gi|311795328|gb|EFR11712.1| DNA replication and repair protein RecF [Caldicellulosiruptor lactoaceticus 6A] Length = 353 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I I +FR + + + EF D + ++ G N GK+SL EA+ + G + + + D+I S Sbjct: 6 IYIENFRSYKQ-RFFEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDVDAINFDS 64 Query: 92 IKTPMPMCMAVPRCKYQL 109 + M V +Y + Sbjct: 65 YYFKLEMSAEVGDIEYSI 82 >gi|312792286|ref|YP_004025209.1| DNA replication and repair protein recf [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179426|gb|ADQ39596.1| DNA replication and repair protein RecF [Caldicellulosiruptor kristjanssonii 177R1B] Length = 353 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I I +FR + + + EF D + ++ G N GK+SL EA+ + G + + + D+I S Sbjct: 6 IYIENFRSYKQ-RFFEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDVDAINFDS 64 Query: 92 IKTPMPMCMAVPRCKYQL 109 + M V +Y + Sbjct: 65 YYFKLEMSAEVGDIEYSI 82 >gi|229002236|dbj|BAH57702.1| hypothetical protein [Staphylococcus aureus] Length = 698 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR----KHGDSI 87 ++I +FR F I I+F + + ++ G N GKS+L A+ +F G +++ +S+ Sbjct: 17 VKIKNFRNFDNID-IDFHEGVNVLIGHNNSGKSNLLRALSLIFDGSVRKQLSVEDFNNSL 75 Query: 88 KKRSIKTPMP 97 K S+K P Sbjct: 76 TKESLKKEAP 85 >gi|221195223|ref|ZP_03568279.1| DNA replication and repair protein RecF [Atopobium rimae ATCC 49626] gi|221185126|gb|EEE17517.1| DNA replication and repair protein RecF [Atopobium rimae ATCC 49626] Length = 361 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +I + +FR F + ++F+ +TI+ G N GK++ EA++ L GY+ R+ Sbjct: 7 NISLVNFRNF-RMLSVDFSQSITILVGHNAVGKTNTIEALQMLTAGYSFRK 56 >gi|83319729|ref|YP_424468.1| structural maintenance of chromosomes (SMC) superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283615|gb|ABC01547.1| structural maintenance of chromosomes (SMC) superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 988 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L I S F+ F ++ ++F +T V G NG GKS++++AI W Sbjct: 4 LKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRW 47 >gi|312866766|ref|ZP_07726979.1| DNA replication and repair protein RecF [Streptococcus parasanguinis F0405] gi|311097549|gb|EFQ55780.1| DNA replication and repair protein RecF [Streptococcus parasanguinis F0405] Length = 364 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 3 LKQLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRN 56 >gi|310825639|ref|YP_003957996.1| DNA replication and repair protein RecF [Eubacterium limosum KIST612] gi|308737373|gb|ADO35033.1| DNA replication and repair protein RecF [Eubacterium limosum KIST612] Length = 371 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + H+R + + + +EF+ + ++ GQN GK++L E+I L GY+ + Sbjct: 6 LHLVHYRNYRD-ETLEFSPGINVICGQNAQGKTNLVESIHLLSRGYSHK 53 >gi|288941061|ref|YP_003443301.1| chromosome segregation protein SMC [Allochromatium vinosum DSM 180] gi|288896433|gb|ADC62269.1| chromosome segregation protein SMC [Allochromatium vinosum DSM 180] Length = 1170 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L + G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLERIKLAGFKSFVDPTTVHFPSNLVGIVGPNGCGKSNVIDAVRWVMGESSAKMLRGESM 61 >gi|269986901|gb|EEZ93177.1| SMC domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 382 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 31/54 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +E+ +F+ F K +F + + G NG GKS+L +A+ ++F G +++ D Sbjct: 7 VELDNFKSFAGHIKFDFVNGFNAIAGANGSGKSNLIDALLFVFGGSSKKEMRSD 60 >gi|259417170|ref|ZP_05741089.1| chromosome segregation protein SMC [Silicibacter sp. TrichCH4B] gi|259346076|gb|EEW57890.1| chromosome segregation protein SMC [Silicibacter sp. TrichCH4B] Length = 1151 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|227889154|ref|ZP_04006959.1| recombination protein F [Lactobacillus johnsonii ATCC 33200] gi|227850383|gb|EEJ60469.1| recombination protein F [Lactobacillus johnsonii ATCC 33200] Length = 374 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + E+ FR F E+ KI F H+ I G N GK++L EAI +L + R Sbjct: 3 LANFELKDFRNFEEL-KINFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHR 53 >gi|227327921|ref|ZP_03831945.1| hypothetical protein PcarcW_11545 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 394 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ EI+H G + + F + + I+ G NG GKS++ ++I ++F + G SI Sbjct: 2 KIIFTEINHIGGIKNL-TLNFTESMNIICGPNGIGKSTILDSIGFMF------SRSGSSI 54 Query: 88 KK 89 KK Sbjct: 55 KK 56 >gi|225374437|ref|ZP_03751658.1| hypothetical protein ROSEINA2194_00052 [Roseburia inulinivorans DSM 16841] gi|225213675|gb|EEG96029.1| hypothetical protein ROSEINA2194_00052 [Roseburia inulinivorans DSM 16841] Length = 921 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ + ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGASMQ 62 >gi|254475736|ref|ZP_05089122.1| chromosome segregation protein SMC [Ruegeria sp. R11] gi|214029979|gb|EEB70814.1| chromosome segregation protein SMC [Ruegeria sp. R11] Length = 1151 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|188996887|ref|YP_001931138.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931954|gb|ACD66584.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 891 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Query: 45 KIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++EF+ + +T + G+NG GKSS+ EAI++ F+G + + D IK Sbjct: 18 QLEFSPNGITAIIGENGSGKSSIIEAIQFAFFGDSDKGNLKDLIK 62 >gi|163738210|ref|ZP_02145626.1| Chromosome segregation protein SMC [Phaeobacter gallaeciensis BS107] gi|161388826|gb|EDQ13179.1| Chromosome segregation protein SMC [Phaeobacter gallaeciensis BS107] Length = 1151 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|163743804|ref|ZP_02151177.1| SMC protein [Phaeobacter gallaeciensis 2.10] gi|161382953|gb|EDQ07349.1| SMC protein [Phaeobacter gallaeciensis 2.10] Length = 1151 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|108763273|ref|YP_628527.1| DNA replication and repair protein RecF [Myxococcus xanthus DK 1622] gi|122981391|sp|Q1DFP6|RECF_MYXXD RecName: Full=DNA replication and repair protein recF gi|108467153|gb|ABF92338.1| DNA replication and repair protein RecF [Myxococcus xanthus DK 1622] Length = 380 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +LL + + FR ++Q A H TI GQNG GK++L EA+ +L Sbjct: 2 RLLALHVHDFRNLPQVQLTPSA-HATIAVGQNGQGKTNLLEALYFL 46 >gi|42518088|ref|NP_964018.1| recombination protein F [Lactobacillus johnsonii NCC 533] gi|51316301|sp|Q74M31|RECF_LACJO RecName: Full=DNA replication and repair protein recF gi|41582372|gb|AAS07984.1| DNA replication and repair protein RecF [Lactobacillus johnsonii NCC 533] gi|329666395|gb|AEB92343.1| recombination protein F [Lactobacillus johnsonii DPC 6026] Length = 374 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + E+ FR F E+ KI F H+ I G N GK++L EAI +L + R Sbjct: 3 LANFELKDFRNFEEL-KINFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHR 53 >gi|297621843|ref|YP_003709980.1| putative chromosome segregation SMC protein [Waddlia chondrophila WSU 86-1044] gi|297377144|gb|ADI38974.1| putative chromosome segregation SMC protein [Waddlia chondrophila WSU 86-1044] Length = 1239 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ R +F L I+I F+ F + +EF +T + G NG GKS++S++ W+ Sbjct: 2 HFRRSFLF-LKKIKILGFKSFADSTVLEFHPGITAIVGPNGCGKSNISDSFRWVL 55 >gi|291522184|emb|CBK80477.1| condensin subunit Smc [Coprococcus catus GD/7] Length = 1188 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF +T + G NG GKS++++A+ W+ + ++ G ++ Sbjct: 3 LKSIEVQGFKSFANKMVFEFHKGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSKME 62 >gi|317131323|ref|YP_004090637.1| chromosome segregation protein SMC [Ethanoligenens harbinense YUAN-3] gi|315469302|gb|ADU25906.1| chromosome segregation protein SMC [Ethanoligenens harbinense YUAN-3] Length = 1193 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I F+ F + + F +T V G NG GKS++S+AI W+ Sbjct: 3 LKSLTIQGFKSFPDKTVLTFGPGITAVVGPNGSGKSNISDAIRWVL 48 >gi|160899027|ref|YP_001564609.1| chromosome segregation protein SMC [Delftia acidovorans SPH-1] gi|160364611|gb|ABX36224.1| chromosome segregation protein SMC [Delftia acidovorans SPH-1] Length = 1204 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +L I++S F+ F E L V G NG GKS++ +A+ W+ G+ Sbjct: 29 IVRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGE 88 Query: 86 SIK 88 S++ Sbjct: 89 SMQ 91 >gi|319646024|ref|ZP_08000254.1| smc protein [Bacillus sp. BT1B_CT2] gi|317391774|gb|EFV72571.1| smc protein [Bacillus sp. BT1B_CT2] Length = 1186 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|307150124|ref|YP_003885508.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7822] gi|306980352|gb|ADN12233.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7822] Length = 384 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++ FR + E Q++ F TI+ G N GKS+L EA+E L Sbjct: 3 LKTVQLRSFRNYRE-QRVNFDSQKTIIVGNNAQGKSNLLEAVELL 46 >gi|52080197|ref|YP_078988.1| chromosome segregation SMC protein-like protein [Bacillus licheniformis ATCC 14580] gi|52785574|ref|YP_091403.1| hypothetical protein BLi01815 [Bacillus licheniformis ATCC 14580] gi|52003408|gb|AAU23350.1| chromosome segregation SMC protein homolg [Bacillus licheniformis ATCC 14580] gi|52348076|gb|AAU40710.1| Smc [Bacillus licheniformis ATCC 14580] Length = 1186 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|32471197|ref|NP_864190.1| hypothetical protein RB1013 [Rhodopirellula baltica SH 1] gi|32396899|emb|CAD71867.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 1355 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I K+ DI+I F +T + + +T+ G N GK++L + + + YG+T+ R+ Sbjct: 5 IMKIKDIQIDGFGVWTGLSVDSLPEGMTLFYGPNEAGKTTLMQFLRAMLYGFTEERRQ 62 >gi|307154953|ref|YP_003890337.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] gi|306985181|gb|ADN17062.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] Length = 1204 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+SHF+ F I F T+++G NG GKS++ +A+ Sbjct: 7 VELSHFKSFGGTTSIPFLPGFTVISGPNGSGKSNILDAL 45 >gi|37528709|ref|NP_932054.1| hypothetical protein plu4903 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788148|emb|CAE17275.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 887 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKHGDSIKKRSI 92 G+ + IE +DHL V G G GKS+L E I + F +G + +H D+I K ++ Sbjct: 272 GYLDGMDIELSDHLNAVIGGRGTGKSTLLECIRYAFDLEPFGKASKAQH-DAIVKNNL 328 >gi|118578554|ref|YP_899804.1| hypothetical protein Ppro_0107 [Pelobacter propionicus DSM 2379] gi|118501264|gb|ABK97746.1| hypothetical protein Ppro_0107 [Pelobacter propionicus DSM 2379] Length = 869 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 5 RKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKS 64 RK C S S + Y+ L+ L +E E Q IEF+ LTI+ G NG GKS Sbjct: 64 RKSINITCDSISNSDYHKNLLLSSLYGVE--GVNALVEKQTIEFSPKLTIIYGVNGSGKS 121 Query: 65 SLSEAIEWLFYGYT 78 ++ F+ T Sbjct: 122 GYIRLLKQAFHSRT 135 >gi|296158914|ref|ZP_06841742.1| chromosome segregation protein SMC [Burkholderia sp. Ch1-1] gi|295890789|gb|EFG70579.1| chromosome segregation protein SMC [Burkholderia sp. Ch1-1] Length = 1198 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLYRRTAGAAFTSHPFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQ 88 >gi|91784127|ref|YP_559333.1| chromosome segregation protein SMC [Burkholderia xenovorans LB400] gi|91688081|gb|ABE31281.1| Chromosome segregation protein SMC [Burkholderia xenovorans LB400] Length = 1198 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLYRRTAGAAFTSHPFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQ 88 >gi|313665382|ref|YP_004047253.1| chromosome segregation protein SMC [Mycoplasma leachii PG50] gi|312949476|gb|ADR24072.1| chromosome segregation protein SMC [Mycoplasma leachii PG50] Length = 988 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L I S F+ F ++ ++F +T V G NG GKS++++AI W Sbjct: 4 LKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRW 47 >gi|312143707|ref|YP_003995153.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] gi|311904358|gb|ADQ14799.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] Length = 1206 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I + F+ F IE +++T V G NG GKS++ +A+ W+ Sbjct: 6 LTKIRLKGFKSFANKTDIELEENITAVVGPNGSGKSNIVDAVRWVL 51 >gi|331703475|ref|YP_004400162.1| chromosome segregation ATPase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256383895|gb|ACU78465.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. capri str. GM12] gi|256384726|gb|ACU79295.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. capri str. GM12] gi|296455977|gb|ADH22212.1| chromosome segregation protein SMC [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802030|emb|CBW54184.1| Chromosome segregation ATPase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 988 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L I S F+ F ++ ++F +T V G NG GKS++++AI W Sbjct: 4 LKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRW 47 >gi|284048840|ref|YP_003399179.1| chromosome segregation protein SMC [Acidaminococcus fermentans DSM 20731] gi|283953061|gb|ADB47864.1| chromosome segregation protein SMC [Acidaminococcus fermentans DSM 20731] Length = 1187 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F + I+F +T + G NG GKS++S+AI W+ Sbjct: 11 FKSFADKVNIDFEPGITAIVGPNGSGKSNISDAIRWVL 48 >gi|255658106|ref|ZP_05403515.1| putative cell division protein Smc [Mitsuokella multacida DSM 20544] gi|260849411|gb|EEX69418.1| putative cell division protein Smc [Mitsuokella multacida DSM 20544] Length = 1197 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F + IEF +T + G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFADKITIEFDHGITAIVGPNGSGKSNITDAVRWVL 48 >gi|222528364|ref|YP_002572246.1| SMC domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455211|gb|ACM59473.1| SMC domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 427 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++L I IS F+ E IEF +T + G NGYGKS+L +A+E+ Sbjct: 2 EILKITISGFKNI-ENTTIEFNHPITAIVGPNGYGKSNLLQALEF 45 >gi|254459768|ref|ZP_05073184.1| chromosome segregation protein SMC [Rhodobacterales bacterium HTCC2083] gi|206676357|gb|EDZ40844.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium HTCC2083] Length = 1151 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LKLQGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|158422636|ref|YP_001523928.1| recombination protein F [Azorhizobium caulinodans ORS 571] gi|158329525|dbj|BAF87010.1| DNA replication and repair protein [Azorhizobium caulinodans ORS 571] Length = 378 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + +S FR ++ Q IE AD ++ G NG GK+++ EA+ L G RR D+ + Sbjct: 11 LTLSRFRSYSAAQ-IEVADGPVVLTGPNGAGKTNILEAVSLLSPGRGLRRAALDAFAQ 67 >gi|42561011|ref|NP_975462.1| P115-like protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492508|emb|CAE77104.1| P115-like protein with SMC_C motif [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320894|gb|ADK69537.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 988 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L I S F+ F ++ ++F +T V G NG GKS++++AI W Sbjct: 4 LKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRW 47 >gi|317057720|ref|YP_004106187.1| chromosome segregation protein SMc [Ruminococcus albus 7] gi|315449989|gb|ADU23553.1| chromosome segregation protein SMC [Ruminococcus albus 7] Length = 1191 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ F+ F + + F +T V G NG GKS++S+A+ W+ + + G+ + Sbjct: 6 LELQGFKSFPDKTVLTFGKGITAVVGPNGSGKSNISDAMRWVMGEQSSKALRGEKM 61 >gi|296282454|ref|ZP_06860452.1| chromosome segregation protein SMC [Citromicrobium bathyomarinum JL354] Length = 1140 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E + LT V G NG GKS+L EAI W+ Sbjct: 6 LRLSGFKSFVEPATLRIEPGLTGVVGPNGCGKSNLLEAIRWV 47 >gi|218245953|ref|YP_002371324.1| recombination protein F [Cyanothece sp. PCC 8801] gi|257059001|ref|YP_003136889.1| recombination protein F [Cyanothece sp. PCC 8802] gi|226737787|sp|B7K127|RECF_CYAP8 RecName: Full=DNA replication and repair protein recF gi|218166431|gb|ACK65168.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 8801] gi|256589167|gb|ACV00054.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 8802] Length = 380 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + +S FR + E Q+IEF TI+ G N GKS++ EA+E L Sbjct: 3 LKTLHLSAFRNYRE-QQIEFDHQKTILLGNNAQGKSNVLEAVELL 46 >gi|46199226|ref|YP_004893.1| hypothetical protein TTC0922 [Thermus thermophilus HB27] gi|46196851|gb|AAS81266.1| hypothetical protein TT_C0922 [Thermus thermophilus HB27] Length = 966 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+ F + E Q ++F+D L + G G GKS+L +AI + YG R Sbjct: 4 LRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVPR 55 >gi|23098983|ref|NP_692449.1| chromosome segregation SMC protein [Oceanobacillus iheyensis HTE831] gi|22777211|dbj|BAC13484.1| chromosome segregation SMC protein [Oceanobacillus iheyensis HTE831] Length = 1188 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LESKGFKSFAERIGVDFVSGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|315221608|ref|ZP_07863528.1| recombination protein F [Streptococcus anginosus F0211] gi|315189442|gb|EFU23137.1| recombination protein F [Streptococcus anginosus F0211] Length = 365 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++I HFR + E +I+F L I GQN GK+++ EAI +L + R + Sbjct: 6 LQIQHFRNY-EATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|322390514|ref|ZP_08064032.1| recombination protein F [Streptococcus parasanguinis ATCC 903] gi|321142788|gb|EFX38248.1| recombination protein F [Streptococcus parasanguinis ATCC 903] Length = 364 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 3 LKHLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRN 56 >gi|260887877|ref|ZP_05899140.1| putative cell division protein Smc [Selenomonas sputigena ATCC 35185] gi|330838742|ref|YP_004413322.1| chromosome segregation protein SMC [Selenomonas sputigena ATCC 35185] gi|260862383|gb|EEX76883.1| putative cell division protein Smc [Selenomonas sputigena ATCC 35185] gi|329746506|gb|AEB99862.1| chromosome segregation protein SMC [Selenomonas sputigena ATCC 35185] Length = 1181 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F + +IEF +T + G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFADKIEIEFHAGVTAIVGPNGSGKSNVTDAVRWVL 48 >gi|260588639|ref|ZP_05854552.1| putative cell division protein Smc [Blautia hansenii DSM 20583] gi|331082010|ref|ZP_08331138.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 6_1_63FAA] gi|260541114|gb|EEX21683.1| putative cell division protein Smc [Blautia hansenii DSM 20583] gi|330405605|gb|EGG85135.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 6_1_63FAA] Length = 1186 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF + +T + G NG GKS++ +A+ W+ + ++ G +++ Sbjct: 3 LKSIEVQGFKSFANKITFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGNMQ 62 >gi|55981257|ref|YP_144554.1| exonuclease SbcC [Thermus thermophilus HB8] gi|55772670|dbj|BAD71111.1| exonuclease SbcC [Thermus thermophilus HB8] Length = 966 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+ F + E Q ++F+D L + G G GKS+L +AI + YG R Sbjct: 4 LRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVPR 55 >gi|331084977|ref|ZP_08334064.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408677|gb|EGG88142.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 9_1_43BFAA] Length = 1186 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGSMQ 62 >gi|331265720|ref|YP_004325350.1| ATPase involved in DNA repair, putative [Streptococcus oralis Uo5] gi|326682392|emb|CBZ00009.1| ATPase involved in DNA repair, putative [Streptococcus oralis Uo5] Length = 880 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIKKRSI 92 I +F+ + I+F +++T+ G NG+GK+++ +A+E G +R + D S + S Sbjct: 8 IKNFKNIKGTRIIDFQENVTLFVGPNGFGKTTIFDALELSLTGRIRRIEESDYSDGRSSF 67 Query: 93 KTP 95 TP Sbjct: 68 STP 70 >gi|325661267|ref|ZP_08149894.1| hypothetical protein HMPREF0490_00627 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472774|gb|EGC75985.1| hypothetical protein HMPREF0490_00627 [Lachnospiraceae bacterium 4_1_37FAA] Length = 396 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGSMQ 62 >gi|300120555|emb|CBK20109.2| unnamed protein product [Blastocystis hominis] Length = 421 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + + HF+ + QK F++ L + G+NG GKS+L +AI Sbjct: 4 LEQVSVFHFKSYDNEQKYRFSEKLNCIVGRNGSGKSALIDAI 45 >gi|255263544|ref|ZP_05342886.1| chromosome segregation protein SMC [Thalassiobium sp. R2A62] gi|255105879|gb|EET48553.1| chromosome segregation protein SMC [Thalassiobium sp. R2A62] Length = 1151 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|258511330|ref|YP_003184764.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478056|gb|ACV58375.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1190 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+I F+ F + +I + +T + G NG GKS++++A+ W+ + R G ++ Sbjct: 3 LKQIDILGFKSFADKTQIVLSPGITAIVGPNGSGKSNIADALRWVLGEQSVRNLRGSKME 62 >gi|126733815|ref|ZP_01749562.1| chromosome segregation protein, putative [Roseobacter sp. CCS2] gi|126716681|gb|EBA13545.1| chromosome segregation protein, putative [Roseobacter sp. CCS2] Length = 1151 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|84514557|ref|ZP_01001921.1| SMC protein [Loktanella vestfoldensis SKA53] gi|84511608|gb|EAQ08061.1| SMC protein [Loktanella vestfoldensis SKA53] Length = 1151 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|99082427|ref|YP_614581.1| chromosome segregation protein SMC [Ruegeria sp. TM1040] gi|99038707|gb|ABF65319.1| Chromosome segregation protein SMC [Ruegeria sp. TM1040] Length = 1151 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWV 47 >gi|319941628|ref|ZP_08015952.1| ATP/GTP-binding protein [Sutterella wadsworthensis 3_1_45B] gi|319804858|gb|EFW01712.1| ATP/GTP-binding protein [Sutterella wadsworthensis 3_1_45B] Length = 511 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++I +FRG+ + ++F D+LT++ G+N GKS++ EA++ F Sbjct: 2 KIKSVKIKNFRGYRDEICVDF-DNLTVLIGKNDIGKSTILEALDIFF 47 >gi|291563452|emb|CBL42268.1| condensin subunit Smc [butyrate-producing bacterium SS3/4] Length = 1185 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIIFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|218291548|ref|ZP_03495422.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius LAA1] gi|218238643|gb|EED05868.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius LAA1] Length = 1190 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+I F+ F + +I + +T + G NG GKS++++A+ W+ + R G ++ Sbjct: 3 LKQIDILGFKSFADKTQIVLSPGITAIVGPNGSGKSNIADALRWVLGEQSVRNLRGSKME 62 >gi|186686202|ref|YP_001869398.1| recombination protein F [Nostoc punctiforme PCC 73102] gi|226737816|sp|B2IVZ4|RECF_NOSP7 RecName: Full=DNA replication and repair protein recF gi|186468654|gb|ACC84455.1| DNA replication and repair protein RecF [Nostoc punctiforme PCC 73102] Length = 374 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + FR + + QK+EF TI+ G N GKS+L EA+E L Sbjct: 3 LKTLNLRQFRNYQD-QKVEFTAAKTILVGNNAQGKSNLLEAVELL 46 >gi|254471690|ref|ZP_05085091.1| chromosome segregation protein SMC [Pseudovibrio sp. JE062] gi|211958892|gb|EEA94091.1| chromosome segregation protein SMC [Pseudovibrio sp. JE062] Length = 1152 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG- 84 K + + F+ F E + D LT + G NG GKS+L EA+ W+ Y R G Sbjct: 2 KFQRLRVLGFKSFVEPMEFVIEDGLTGIVGPNGCGKSNLVEALRWVMGENSYKNMRASGM 61 Query: 85 -DSIKKRSIKTP 95 D I S+ P Sbjct: 62 DDVIFSGSLNRP 73 >gi|196232677|ref|ZP_03131528.1| chromosome segregation protein SMC [Chthoniobacter flavus Ellin428] gi|196223137|gb|EDY17656.1| chromosome segregation protein SMC [Chthoniobacter flavus Ellin428] Length = 1280 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F K+EF +T V G NG GKS++ +A+ W+ Sbjct: 3 LQSLELFGFKSFAPKTKLEFHRGVTAVVGPNGCGKSNVLDAMRWVL 48 >gi|170035857|ref|XP_001845783.1| DNA repair protein RAD50 [Culex quinquefasciatus] gi|167878307|gb|EDS41690.1| DNA repair protein RAD50 [Culex quinquefasciatus] Length = 1292 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Query: 32 IEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +EI R F ++QKI+F LT++ GQNG GK+++ IE L YG T G Sbjct: 7 LEIRGIRSFGVESEDVQKIKFQSPLTLIVGQNGCGKTTI---IECLKYGLTGEVPPGTDR 63 Query: 88 KKRSIKTP 95 K + P Sbjct: 64 GKAFVHDP 71 >gi|325108710|ref|YP_004269778.1| chromosome segregation protein SMC [Planctomyces brasiliensis DSM 5305] gi|324968978|gb|ADY59756.1| chromosome segregation protein SMC [Planctomyces brasiliensis DSM 5305] Length = 1315 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + FA T V G NG GKS++ +A++WL Sbjct: 2 LKSLEVYGFKSFADRTTFAFAPGTTCVVGPNGSGKSNVVDAMKWLL 47 >gi|290581413|ref|YP_003485805.1| putative RecF protein [Streptococcus mutans NN2025] gi|254998312|dbj|BAH88913.1| putative RecF protein [Streptococcus mutans NN2025] Length = 363 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I + H+R +T I+ EF+ L + GQN GK++ EAI +L + R + Sbjct: 6 INLKHYRNYTAIES-EFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTR 55 >gi|253681396|ref|ZP_04862193.1| chromosome segregation protein SMC [Clostridium botulinum D str. 1873] gi|253561108|gb|EES90560.1| chromosome segregation protein SMC [Clostridium botulinum D str. 1873] Length = 1184 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 28/43 (65%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F + ++ F + +T + G NG GKS++ +A++W+ Sbjct: 6 LEIRGFKSFADKTELVFKEGITAIVGPNGSGKSNILDAVKWVL 48 >gi|255535243|ref|YP_003095614.1| hypothetical protein FIC_01102 [Flavobacteriaceae bacterium 3519-10] gi|255341439|gb|ACU07552.1| hypothetical protein FIC_01102 [Flavobacteriaceae bacterium 3519-10] Length = 550 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I+I +FR IQ+ EF I GQN GK++ EA+E+ F G ++ K D Sbjct: 2 KIKAIKIDNFR---SIQQTEFTTTDFNIFVGQNNCGKTNFFEAVEFFFNGISKSTKLEDL 58 Query: 87 IKKR 90 KR Sbjct: 59 KFKR 62 >gi|158335947|ref|YP_001517121.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] gi|158306188|gb|ABW27805.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] Length = 1220 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 24/39 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+SHF+ F I T+V+G NG GKS+L +A+ Sbjct: 6 LELSHFKSFGSTTAIPLLPGFTVVSGPNGSGKSNLLDAL 44 >gi|126179774|ref|YP_001047739.1| chromosome segregation protein SMC [Methanoculleus marisnigri JR1] gi|125862568|gb|ABN57757.1| condensin subunit Smc [Methanoculleus marisnigri JR1] Length = 1147 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 26/39 (66%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +EI +F+ F KI F + T+V+G NG GKS++ +++ Sbjct: 6 LEIDNFKSFARKTKIPFFEGFTVVSGPNGSGKSNIIDSL 44 >gi|167629174|ref|YP_001679673.1| DNA replication and repair protein recf [Heliobacterium modesticaldum Ice1] gi|226737804|sp|B0TAL0|RECF_HELMI RecName: Full=DNA replication and repair protein recF gi|167591914|gb|ABZ83662.1| DNA replication and repair protein recf [Heliobacterium modesticaldum Ice1] Length = 372 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 IE++HFR + +Q ++F + I G NG GK++L E+I L G + R Sbjct: 6 IELAHFRNYRGLQ-VDFMPGVNIFVGANGQGKTNLLESIALLSGGGSHR 53 >gi|219847692|ref|YP_002462125.1| chromosome segregation protein SMC [Chloroflexus aggregans DSM 9485] gi|219541951|gb|ACL23689.1| chromosome segregation protein SMC [Chloroflexus aggregans DSM 9485] Length = 1189 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F EF + V G NG GKS+L++A+ W+ Sbjct: 6 LEIQGFKTFASRTVFEFQPGIIAVVGPNGSGKSNLADAVRWVL 48 >gi|309791173|ref|ZP_07685705.1| chromosome segregation protein SMC [Oscillochloris trichoides DG6] gi|308226735|gb|EFO80431.1| chromosome segregation protein SMC [Oscillochloris trichoides DG6] Length = 1192 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I F+ F +EF +T + G NG GKS++++A+ W+ Sbjct: 10 LDILGFKTFATRTSVEFQPGITAIVGPNGSGKSNIADAVRWVL 52 >gi|300311480|ref|YP_003775572.1| chromosome segregation SMC ATPase [Herbaspirillum seropedicae SmR1] gi|300074265|gb|ADJ63664.1| chromosome segregation SMC ATPase protein [Herbaspirillum seropedicae SmR1] Length = 1176 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSIKLSGFKSFVEPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|288941259|ref|YP_003443499.1| hypothetical protein Alvin_1534 [Allochromatium vinosum DSM 180] gi|288896631|gb|ADC62467.1| hypothetical protein Alvin_1534 [Allochromatium vinosum DSM 180] Length = 659 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ + + H+R E Q+I F LT++ G N GKS+L EA + RR D Sbjct: 2 KLVSLRVRHYRLHRE-QQIAFDPSLTLIGGANETGKSTLVEAAHRALF-LNHRRTGQDLA 59 Query: 88 KKRS 91 RS Sbjct: 60 AMRS 63 >gi|255279938|ref|ZP_05344493.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] gi|255269711|gb|EET62916.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] Length = 528 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++++I + HF F Q +EF + ++ G N GKS++ I +F+G + R Sbjct: 2 EIIEIRMDHFGKFNG-QSMEFHPGINVIYGDNETGKSTMRSFIRGMFFGIDRMRGRAAQQ 60 Query: 88 KKRSIKTP 95 + S++ P Sbjct: 61 DEYSLRQP 68 >gi|254458045|ref|ZP_05071472.1| RecF/RecN/SMC N terminal domain, putative [Campylobacterales bacterium GD 1] gi|207085438|gb|EDZ62723.1| RecF/RecN/SMC N terminal domain, putative [Campylobacterales bacterium GD 1] Length = 789 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F+ +T IEF + L + G+NG GKS++ +AI + YG ++R + D ++ Sbjct: 3 LSKLHLENFKKYTSYD-IEFGEGLVGIIGKNGSGKSTIFDAILFALYGEAKKRGNKDILR 61 >gi|52842826|ref|YP_096625.1| chromosome segregation SMC protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629937|gb|AAU28678.1| chromosome segregation SMC protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|54298609|ref|YP_124978.1| hypothetical protein lpp2673 [Legionella pneumophila str. Paris] gi|53752394|emb|CAH13826.1| hypothetical protein lpp2673 [Legionella pneumophila str. Paris] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|307611497|emb|CBX01171.1| hypothetical protein LPW_28701 [Legionella pneumophila 130b] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|296108265|ref|YP_003619966.1| chromosome segregation SMC protein [Legionella pneumophila 2300/99 Alcoy] gi|295650167|gb|ADG26014.1| chromosome segregation SMC protein [Legionella pneumophila 2300/99 Alcoy] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|295103717|emb|CBL01261.1| recF protein [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL +E+ ++R ++E LT++ G NG GK++L EAI WL G R D+ Sbjct: 3 LLSLEVQNYRNICA-ARLEPGRELTVICGNNGQGKTNLLEAI-WLLTGGKSFRGGKDA 58 >gi|118590783|ref|ZP_01548184.1| Chromosome segregation ATPase [Stappia aggregata IAM 12614] gi|118436759|gb|EAV43399.1| Chromosome segregation ATPase [Stappia aggregata IAM 12614] Length = 1152 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG- 84 K + I F+ F E + + LT V G NG GKS+L EA+ W+ Y R G Sbjct: 2 KFSKLRIVGFKSFVEPMEFIIGNGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASGM 61 Query: 85 -DSIKKRSIKTP 95 D I S+ P Sbjct: 62 DDVIFSGSLNRP 73 >gi|57641330|ref|YP_183808.1| ATP-dependent endonuclease [Thermococcus kodakarensis KOD1] gi|57159654|dbj|BAD85584.1| predicted ATP-dependent endonuclease, OLD family [Thermococcus kodakarensis KOD1] Length = 653 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++++IE+++FR ++ D LT++ G+NG GKSSL +A++ F Sbjct: 2 RIVEIEVNNFRSLRAVKMP--LDELTVLIGRNGAGKSSLLQALDLFF 46 >gi|54295457|ref|YP_127872.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] gi|53755289|emb|CAH16783.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|33597878|ref|NP_885521.1| putative chromosome partition protein [Bordetella parapertussis 12822] gi|33602781|ref|NP_890341.1| putative chromosome partition protein [Bordetella bronchiseptica RB50] gi|33574307|emb|CAE38640.1| putative chromosome partition protein [Bordetella parapertussis] gi|33577223|emb|CAE35780.1| putative chromosome partition protein [Bordetella bronchiseptica RB50] Length = 1195 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++Y R +L ++++ F+ F + I L V G NG GKS++ +A+ W+ Sbjct: 12 STYPVRHRTVRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEA 71 Query: 78 TQRRKHGDSIK 88 G+S++ Sbjct: 72 KASELRGESMQ 82 >gi|296393104|ref|YP_003657988.1| hypothetical protein Srot_0675 [Segniliparus rotundus DSM 44985] gi|296180251|gb|ADG97157.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length = 811 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + +SH+RG + + A T+V G N GKSS+ EA++ LF + DS Sbjct: 2 RLHRLVLSHYRGVRHREVVFAAQGATVVEGPNEAGKSSMVEALDLLF-------EVKDSS 54 Query: 88 KKRSIKTPMP 97 K + ++ P Sbjct: 55 KTKQLRAIAP 64 >gi|313127099|ref|YP_004037369.1| ATPase involved in DNA repair [Halogeometricum borinquense DSM 11551] gi|312293464|gb|ADQ67924.1| ATPase involved in DNA repair [Halogeometricum borinquense DSM 11551] Length = 894 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I + +F+ + E ++ D +T+++G NG GKSSL EA + YG Sbjct: 6 IRLQNFKPYAETD-LDLTDGVTVIHGLNGSGKSSLLEACFFALYG 49 >gi|148358645|ref|YP_001249852.1| chromosome segregation SMC protein [Legionella pneumophila str. Corby] gi|148280418|gb|ABQ54506.1| chromosome segregation SMC protein [Legionella pneumophila str. Corby] Length = 1164 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 3 LKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|13357697|ref|NP_077971.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762065|ref|YP_001752223.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920182|ref|ZP_02931569.1| p115 protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508750|ref|ZP_02958224.1| p115 protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186702010|ref|ZP_02971627.1| p115 protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356999|pir||C82930 p115 protein UU140 [imported] - Ureaplasma urealyticum gi|6899099|gb|AAF30546.1|AE002114_13 p115 protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827642|gb|ACA32904.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902559|gb|EDT48848.1| p115 protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675683|gb|EDT87588.1| p115 protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700790|gb|EDU19072.1| p115 protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 981 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E IEF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAHGFKSFGEPVVIEFKHPMTGIIGANGTGKSNIIDALKWV 48 >gi|163784051|ref|ZP_02179006.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] gi|159880678|gb|EDP74227.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] Length = 890 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Query: 45 KIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ FA++ +T++ G NG GKSS+ EAI++ YG + + Sbjct: 18 KLNFAENGITVLIGDNGAGKSSILEAIQFALYGSSSK 54 >gi|24380484|ref|NP_722439.1| recombination protein F [Streptococcus mutans UA159] gi|51316462|sp|Q8DRR3|RECF_STRMU RecName: Full=DNA replication and repair protein recF gi|24378515|gb|AAN59745.1|AE015036_4 putative RecF protein, ATPase involved in DNA repair [Streptococcus mutans UA159] Length = 363 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I + H+R +T I+ EF+ L + GQN GK++ EAI +L + R + Sbjct: 6 INLKHYRNYTAIES-EFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTR 55 >gi|78187531|ref|YP_375574.1| chromosome segregation protein SMC [Chlorobium luteolum DSM 273] gi|78167433|gb|ABB24531.1| Chromosome segregation protein SMC [Chlorobium luteolum DSM 273] Length = 1177 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIEIFGFKSFAHRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|196247667|ref|ZP_03146369.1| chromosome segregation protein SMC [Geobacillus sp. G11MC16] gi|196212451|gb|EDY07208.1| chromosome segregation protein SMC [Geobacillus sp. G11MC16] Length = 1187 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + I+F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIDFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|156740860|ref|YP_001430989.1| chromosome segregation protein SMC [Roseiflexus castenholzii DSM 13941] gi|156232188|gb|ABU56971.1| chromosome segregation protein SMC [Roseiflexus castenholzii DSM 13941] Length = 1200 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 24/44 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L +EI F+ F EF +T V G NG GKS+L +AI W Sbjct: 3 LRRLEIQGFKTFAGHTLFEFQPGVTAVVGPNGSGKSNLVDAIRW 46 >gi|138894714|ref|YP_001125167.1| chromosome partition protein [Geobacillus thermodenitrificans NG80-2] gi|134266227|gb|ABO66422.1| SMC protein (Chromosome partition protein) [Geobacillus thermodenitrificans NG80-2] Length = 1187 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + I+F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFADRVSIDFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|296536550|ref|ZP_06898635.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296263115|gb|EFH09655.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 308 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I+ F+ F E ++ LT + G NG GKS++ EA+ W G T R Sbjct: 51 LVRLRIAGFKSFAEPTTLDVLPGLTGIVGPNGCGKSNVVEALRWAM-GETNAR 102 >gi|126738031|ref|ZP_01753752.1| SMC protein [Roseobacter sp. SK209-2-6] gi|126720528|gb|EBA17233.1| SMC protein [Roseobacter sp. SK209-2-6] Length = 1151 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLSGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|126732396|ref|ZP_01748195.1| hypothetical protein SSE37_05587 [Sagittula stellata E-37] gi|126707035|gb|EBA06102.1| hypothetical protein SSE37_05587 [Sagittula stellata E-37] Length = 868 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 8/84 (9%) Query: 28 KLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I +++ R FTE +++ D L ++ N +GKS+L +AI+ LF+ + HG Sbjct: 2 KLRSITLNNVRRFTEPARVDGLGDGLNVLCEPNEHGKSTLFDAIQALFF-----KPHGS- 55 Query: 87 IKKRSIKTPMPMCMAVPRCKYQLK 110 + + + + P P +L+ Sbjct: 56 -RDKEVSSLRPHAGGAPEVTVELE 78 >gi|94496772|ref|ZP_01303347.1| hypothetical protein SKA58_16573 [Sphingomonas sp. SKA58] gi|94423785|gb|EAT08811.1| hypothetical protein SKA58_16573 [Sphingomonas sp. SKA58] Length = 673 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ---RRKH 83 +++T+++ +NG GK++L A+ W FYG T RKH Sbjct: 28 ENVTLIHAENGVGKTTLLNAMLWCFYGLTTAKFERKH 64 >gi|189347468|ref|YP_001943997.1| chromosome segregation protein SMC [Chlorobium limicola DSM 245] gi|189341615|gb|ACD91018.1| chromosome segregation protein SMC [Chlorobium limicola DSM 245] Length = 1178 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIEILGFKSFAHRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|296133562|ref|YP_003640809.1| chromosome segregation protein SMC [Thermincola sp. JR] gi|296032140|gb|ADG82908.1| chromosome segregation protein SMC [Thermincola potens JR] Length = 1189 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ + ++ F +T V G NG GKS++S+AI W+ Sbjct: 6 LEIQGFKSLADRTELYFNPGITAVVGPNGSGKSNISDAIRWVL 48 >gi|291546428|emb|CBL19536.1| hypothetical protein CK1_14050 [Ruminococcus sp. SR1/5] Length = 651 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+L +++ +F+G E++ I+ + + G NG GKS++ A WL YG Sbjct: 2 KILKMKLENFQGVKELE-IDPQGESSAIYGDNGTGKSTVYNAFTWLMYG 49 >gi|302388603|ref|YP_003824424.1| DNA replication and repair protein RecF [Thermosediminibacter oceani DSM 16646] gi|302199231|gb|ADL06801.1| DNA replication and repair protein RecF [Thermosediminibacter oceani DSM 16646] Length = 367 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + FR F E + +EF+ L ++ G NG GK++L EAI +L Sbjct: 3 LTKIRLFDFRNFREAE-VEFSGGLNVLYGDNGQGKTNLLEAIHFL 46 >gi|261251175|ref|ZP_05943749.1| ATP-dependent endonuclease [Vibrio orientalis CIP 102891] gi|260938048|gb|EEX94036.1| ATP-dependent endonuclease [Vibrio orientalis CIP 102891] Length = 543 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 KL IEIS FRG I+++ A D LT + G+N +GKSSL +A+ Sbjct: 2 KLERIEISGFRG---IKRLSIAFDELTTLIGENTWGKSSLLDAL 42 >gi|219851402|ref|YP_002465834.1| chromosome segregation protein SMC [Methanosphaerula palustris E1-9c] gi|219545661|gb|ACL16111.1| chromosome segregation protein SMC [Methanosphaerula palustris E1-9c] Length = 1146 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 26/40 (65%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++EI +F+ F I F + T+V+G NG GKS++ +AI Sbjct: 5 ELEIDNFKSFGRKTTIPFFEGFTVVSGPNGSGKSNIIDAI 44 >gi|307353930|ref|YP_003894981.1| hypothetical protein Mpet_1790 [Methanoplanus petrolearius DSM 11571] gi|307157163|gb|ADN36543.1| conserved hypothetical protein [Methanoplanus petrolearius DSM 11571] Length = 603 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL+ + + +FR + + + I+ D TI+ G+N GKSS+ EA+E F Sbjct: 2 KLISVTLKNFRCYLDEKTIQIQDLTTII-GKNDIGKSSVLEALEIFF 47 >gi|150390511|ref|YP_001320560.1| chromosome segregation protein SMC [Alkaliphilus metalliredigens QYMF] gi|149950373|gb|ABR48901.1| chromosome segregation protein SMC [Alkaliphilus metalliredigens QYMF] Length = 1194 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F ++ F T V G NG GKS++S++I W+ Sbjct: 6 LEIQGFKSFANKIEMNFEQGFTAVVGPNGSGKSNISDSIRWVL 48 >gi|257066270|ref|YP_003152526.1| hypothetical protein Apre_0777 [Anaerococcus prevotii DSM 20548] gi|256798150|gb|ACV28805.1| conserved hypothetical protein [Anaerococcus prevotii DSM 20548] Length = 617 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGDSIKK 89 +I I F F E +KI F ++ ++ G+N GKS+++ IE L YG+ + + K S KK Sbjct: 8 EIHIISFGKF-EDKKIRFDENFNLIYGKNETGKSTVTNFIEGLLYGFDEGKNKKSFSYKK 66 Query: 90 RSIKTPMPMCMA 101 + K + A Sbjct: 67 EAYKPKLSYKYA 78 >gi|254172444|ref|ZP_04879119.1| DNA double-strand break repair Rad50 ATPase [Thermococcus sp. AM4] gi|214033373|gb|EEB74200.1| DNA double-strand break repair Rad50 ATPase [Thermococcus sp. AM4] Length = 885 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ IEI +FR + +EF+D + ++ GQNG GKSS+ EAI Sbjct: 2 RVRKIEIRNFRAHRK-SVVEFSDGINLIIGQNGAGKSSILEAI 43 >gi|295425227|ref|ZP_06817930.1| DNA repair protein RecN [Lactobacillus amylolyticus DSM 11664] gi|295065003|gb|EFG55908.1| DNA repair protein RecN [Lactobacillus amylolyticus DSM 11664] Length = 562 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++++I +F + K+ F +H+T++ G+ G GKS L +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKALKVRFQEHMTVLIGETGAGKSILIDAVSLLMGGRGQK 52 >gi|167042367|gb|ABZ07095.1| putative RecF/RecN/SMC N terminal domain protein [uncultured marine crenarchaeote HF4000_ANIW97M7] Length = 686 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 ++ F + +T+ G+NG GKSS+ EAI + +G T R D I+ + + V Sbjct: 17 ELSFDNGVTVFIGENGAGKSSIIEAITFALFGKTTRGAIEDVIRDGETQAVTQIYFEVNG 76 Query: 105 CKYQ 108 KYQ Sbjct: 77 KKYQ 80 >gi|218442160|ref|YP_002380489.1| recombination protein F [Cyanothece sp. PCC 7424] gi|226737786|sp|B7KID4|RECF_CYAP7 RecName: Full=DNA replication and repair protein recF gi|218174888|gb|ACK73621.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7424] Length = 384 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++ FR + E Q++ F TI+ G N GKS+L EA+E L Sbjct: 3 LKTVQLRSFRNYRE-QQVNFESQKTIIVGNNAQGKSNLLEAVELL 46 >gi|241764428|ref|ZP_04762452.1| chromosome segregation protein SMC [Acidovorax delafieldii 2AN] gi|241366170|gb|EER60747.1| chromosome segregation protein SMC [Acidovorax delafieldii 2AN] Length = 1174 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|229816228|ref|ZP_04446538.1| hypothetical protein COLINT_03278 [Collinsella intestinalis DSM 13280] gi|229808236|gb|EEP44028.1| hypothetical protein COLINT_03278 [Collinsella intestinalis DSM 13280] Length = 360 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + H+R F + +KIE +T+ G+N GK++L EA++ L G + R+ Sbjct: 7 ELSVLHYRSFDD-RKIELDPGITVFVGRNAVGKTNLVEALQLLTAGASFRK 56 >gi|319649603|ref|ZP_08003759.1| smc protein [Bacillus sp. 2_A_57_CT2] gi|317398765|gb|EFV79447.1| smc protein [Bacillus sp. 2_A_57_CT2] Length = 1188 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F E ++F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFAERITVDFVPGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|206976162|ref|ZP_03237071.1| ATPase involved in DNA repair, putative [Bacillus cereus H3081.97] gi|206745616|gb|EDZ57014.1| ATPase involved in DNA repair, putative [Bacillus cereus H3081.97] Length = 898 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 I +F+ + + + + + ++ G NG+GKSS +AIEW G R + +S K I Sbjct: 8 IKNFKNYMGEVEFDLSKEVILLYGANGFGKSSFFDAIEWCLTGKINRFEGSESELKYDI 66 >gi|254507673|ref|ZP_05119805.1| ATPase [Vibrio parahaemolyticus 16] gi|219549370|gb|EED26363.1| ATPase [Vibrio parahaemolyticus 16] Length = 583 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE----WLFYGYTQRRKH 83 K+ +I I +FR F + +F ++ ++ G NG GK++L +AI+ WL + Sbjct: 93 KIKEINIENFRNFDSLFLSDFDPNINVIVGTNGAGKTTLLDAIDTSLSWLRNSILKTGGS 152 Query: 84 GDSIKKRSI 92 G+ I ++ I Sbjct: 153 GNYISEKDI 161 >gi|320195808|gb|EFW70433.1| Purine NTPase [Escherichia coli WV_060327] Length = 797 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL + +++F+ F + I + L I++G NG+GK++L +AIE F G R + Sbjct: 1 MIKLGKLRVNNFKSFKDDFTINLGSTDLFILDGPNGFGKTTLFDAIELCFTGKIGRVSNT 60 Query: 85 DSIKKRS 91 D +K + Sbjct: 61 DKKQKNN 67 >gi|312883362|ref|ZP_07743088.1| ATP-dependent endonuclease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368978|gb|EFP96504.1| ATP-dependent endonuclease [Vibrio caribbenthicus ATCC BAA-2122] Length = 543 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 KL IEIS FRG I+++ A D LT + G+N +GKSSL +A+ Sbjct: 2 KLERIEISGFRG---IKRLSIAFDELTTLIGENTWGKSSLLDAL 42 >gi|224476346|ref|YP_002633952.1| putative chromosome segregation protein SMC [Staphylococcus carnosus subsp. carnosus TM300] gi|222420953|emb|CAL27767.1| putative chromosome segregation protein SMC [Staphylococcus carnosus subsp. carnosus TM300] Length = 1189 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 25/38 (65%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F E ++ F +T + G NG GKS++++AI+W+ Sbjct: 12 FKSFAEQTEVNFDQGVTAIVGPNGSGKSNVTDAIKWVL 49 >gi|163816420|ref|ZP_02207784.1| hypothetical protein COPEUT_02609 [Coprococcus eutactus ATCC 27759] gi|158448120|gb|EDP25115.1| hypothetical protein COPEUT_02609 [Coprococcus eutactus ATCC 27759] Length = 752 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 36 HFRGFTEIQKIE--FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + GF +++K+E F D L +NG+GKS+ + + +FYG+ K + +R Sbjct: 7 YIEGFGKLRKLEIKFEDGLNCFVKENGWGKSTFAAFLRVMFYGFEGETKRNEFENERKYY 66 Query: 94 TP 95 P Sbjct: 67 RP 68 >gi|332283844|ref|YP_004415755.1| ATP-dependent OLD family endonuclease [Pusillimonas sp. T7-7] gi|330427797|gb|AEC19131.1| ATP-dependent OLD family endonuclease [Pusillimonas sp. T7-7] Length = 626 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E + D T V G+N GKSS+ EA+E F + + GD+ Sbjct: 21 RLESVSIKNFRCYREETTVSMVDLTTFV-GKNDIGKSSILEALEIFFNNEAVKIEQGDA 78 >gi|325288204|ref|YP_004264385.1| DNA replication and repair protein RecF [Syntrophobotulus glycolicus DSM 8271] gi|324963605|gb|ADY54384.1| DNA replication and repair protein RecF [Syntrophobotulus glycolicus DSM 8271] Length = 366 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +FR ++E Q+I F + + I+ G NG GK+++ E I +L G + R Sbjct: 10 NFRNYSE-QEITFTNGINILVGSNGQGKTNVLEGIYYLLMGKSYR 53 >gi|310830919|ref|YP_003966020.1| ATPase involved in DNA repair [Paenibacillus polymyxa SC2] gi|309250386|gb|ADO59952.1| ATPase involved in DNA repair [Paenibacillus polymyxa SC2] Length = 700 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L+ +++ FRGF + I F G NG GKSS+ E + W+ G Sbjct: 10 LIQLIKVQVQGFRGFKDTVTIPFDLGKNEFLGDNGKGKSSIGELLAWIMTG 60 >gi|47157021|gb|AAT12384.1| CUT3-like chromosome segregation protein-like protein [Antonospora locustae] Length = 186 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL I I++F+ F +I DH LT++ G NG GKS++ +A+ ++ ++ +H Sbjct: 4 LKLTTIRINNFKSFEGEHEISGLDHSLTVIVGPNGSGKSNIIDAVLFVLGFRAKKMRHA 62 >gi|75676792|ref|YP_319213.1| chromosome segregation protein SMC [Nitrobacter winogradskyi Nb-255] gi|74421662|gb|ABA05861.1| condensin subunit Smc [Nitrobacter winogradskyi Nb-255] Length = 1168 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 24/45 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E A LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFVIAPGLTGVVGPNGCGKSNLVEALRW 46 >gi|284047391|ref|YP_003397730.1| DNA replication and repair protein RecF [Acidaminococcus fermentans DSM 20731] gi|283951612|gb|ADB46415.1| DNA replication and repair protein RecF [Acidaminococcus fermentans DSM 20731] Length = 378 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++ + HFR + ++ I ++TI G N GK++L E I G++ R +H + + Sbjct: 2 RLENLRLLHFRNYEQVS-IPLGHNITIFYGDNAQGKTNLLEGIHTAARGFSFRTRHEEEL 60 >gi|215426595|ref|ZP_03424514.1| hypothetical protein MtubT9_09472 [Mycobacterium tuberculosis T92] Length = 188 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL 48 >gi|194397225|ref|YP_002037963.1| DNA helicase associated protein [Streptococcus pneumoniae G54] gi|307127256|ref|YP_003879287.1| Yga2G [Streptococcus pneumoniae 670-6B] gi|194356892|gb|ACF55340.1| DNA helicase associated protein [Streptococcus pneumoniae G54] gi|306484318|gb|ADM91187.1| Yga2G [Streptococcus pneumoniae 670-6B] gi|319412010|emb|CBY91943.1| DNA helicase associated protein [Streptococcus pneumoniae] Length = 689 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL + I++FR F E Q IE + T++ G N GK+++ +A+ LF K D I Sbjct: 2 KLTKVIINNFRSFGESQIIELNNQ-TVLIGNNSSGKTTVLQALSKLF-----SDKQNDRI 55 Query: 88 KKRS 91 K+S Sbjct: 56 IKKS 59 >gi|126179563|ref|YP_001047528.1| SMC domain-containing protein [Methanoculleus marisnigri JR1] gi|125862357|gb|ABN57546.1| SMC domain protein [Methanoculleus marisnigri JR1] Length = 1057 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + +F+ F + Q+I F D +T + G NG GKSS+ A+ + YG GD I S Sbjct: 8 MRNFKRFRD-QEIVFQDGITGIVGNNGTGKSSIVSAVLFALYGLQGTGLDGDYIVS-SFA 65 Query: 94 TPMPMC 99 P +C Sbjct: 66 GPQDVC 71 >gi|312871900|ref|ZP_07731984.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 3008A-a] gi|325913419|ref|ZP_08175785.1| chromosome segregation protein SMC [Lactobacillus iners UPII 60-B] gi|311092622|gb|EFQ50982.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 3008A-a] gi|325477188|gb|EGC80334.1| chromosome segregation protein SMC [Lactobacillus iners UPII 60-B] Length = 1185 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|312874415|ref|ZP_07734445.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2052A-d] gi|325911851|ref|ZP_08174255.1| chromosome segregation protein SMC [Lactobacillus iners UPII 143-D] gi|311090027|gb|EFQ48441.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2052A-d] gi|325476357|gb|EGC79519.1| chromosome segregation protein SMC [Lactobacillus iners UPII 143-D] Length = 1185 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|259501534|ref|ZP_05744436.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|302191493|ref|ZP_07267747.1| chromosome segregation protein SMC [Lactobacillus iners AB-1] gi|259167052|gb|EEW51547.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] Length = 1185 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|103487751|ref|YP_617312.1| chromosome segregation protein SMC [Sphingopyxis alaskensis RB2256] gi|98977828|gb|ABF53979.1| Chromosome segregation protein SMC [Sphingopyxis alaskensis RB2256] Length = 1147 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F E ++ LT V G NG GKS+L EAI W+ Sbjct: 6 LRLTGFKSFVEPTELRIEPGLTGVVGPNGCGKSNLLEAIRWV 47 >gi|86606664|ref|YP_475427.1| recombination protein F [Synechococcus sp. JA-3-3Ab] gi|97181044|sp|Q2JQG8|RECF_SYNJA RecName: Full=DNA replication and repair protein recF gi|86555206|gb|ABD00164.1| DNA replication and repair protein RecF [Synechococcus sp. JA-3-3Ab] Length = 380 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + HFR + + QKI F TI+ G+N GK++L EA+E L Sbjct: 6 LHLWHFRNYRD-QKISFEAPKTILVGENAQGKTNLLEAVELL 46 >gi|329921149|ref|ZP_08277671.1| chromosome segregation protein SMC [Lactobacillus iners SPIN 1401G] gi|328934787|gb|EGG31278.1| chromosome segregation protein SMC [Lactobacillus iners SPIN 1401G] Length = 1185 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|315653377|ref|ZP_07906299.1| chromosome segregation protein Smc [Lactobacillus iners ATCC 55195] gi|315489302|gb|EFU78942.1| chromosome segregation protein Smc [Lactobacillus iners ATCC 55195] Length = 1185 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|312872435|ref|ZP_07732504.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2062A-h1] gi|311092017|gb|EFQ50392.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2062A-h1] Length = 1185 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|312874531|ref|ZP_07734556.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2053A-b] gi|311089922|gb|EFQ48341.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2053A-b] Length = 1185 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|309804249|ref|ZP_07698326.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 11V1-d] gi|308163652|gb|EFO65922.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 11V1-d] Length = 743 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|307566081|ref|ZP_07628539.1| DNA sulfur modification protein DndD [Prevotella amnii CRIS 21A-A] gi|307345269|gb|EFN90648.1| DNA sulfur modification protein DndD [Prevotella amnii CRIS 21A-A] Length = 695 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 32 IEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYG 76 IE+ +FR + + KI+ + + IV+G NGYGK++ ++ W YG Sbjct: 6 IELYNFRIYRGVNKIDLTPNGERNIIIVSGNNGYGKTTFLMSLVWCLYG 54 >gi|254785948|ref|YP_003073377.1| chromosome segregation protein SMC [Teredinibacter turnerae T7901] gi|237684299|gb|ACR11563.1| chromosome segregation protein SMC [Teredinibacter turnerae T7901] Length = 1166 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+++ Sbjct: 2 RLKCIKLAGFKSFVDPTTVTFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGEAM 61 >gi|126699476|ref|YP_001088373.1| putative conjugative transposon DNA recombination protein [Clostridium difficile 630] gi|115250913|emb|CAJ68739.1| putative DNA recombination protein Tn1549-like,CTn5-Orf24 [Clostridium difficile] Length = 540 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F+ F++ ++F + + I+ G NG GKS++ EAI + G HG +I+ Sbjct: 6 LKIKNFKCFSDWFTVDFENGINILVGNNGTGKSTILEAINLVLTG----TYHGKNIR 58 >gi|84685466|ref|ZP_01013364.1| SMC protein [Maritimibacter alkaliphilus HTCC2654] gi|84666623|gb|EAQ13095.1| SMC protein [Rhodobacterales bacterium HTCC2654] Length = 1151 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ F+ F + + A+ LT V G NG GKS+L EA+ W+ + GD ++ Sbjct: 6 LRLNGFKSFVDPTDLVIANGLTGVVGPNGCGKSNLLEALRWVMGENRAKAMRGDGME 62 >gi|189499472|ref|YP_001958942.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides BS1] gi|189494913|gb|ACE03461.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides BS1] Length = 1185 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F KI F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIELFGFKSFAHKVKITFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|57234648|ref|YP_181293.1| exonuclease SbcC, putative [Dehalococcoides ethenogenes 195] gi|57225096|gb|AAW40153.1| exonuclease SbcC, putative [Dehalococcoides ethenogenes 195] Length = 859 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 29/59 (49%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 H + GQNG GKS+L +AI W +G ++ + D + + + + + YQ+ Sbjct: 27 HTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVVSLNEQEAEVSLDFEISGELYQV 85 >gi|304309655|ref|YP_003809253.1| Recombinational DNA repair ATPase [gamma proteobacterium HdN1] gi|301795388|emb|CBL43586.1| Recombinational DNA repair ATPase [gamma proteobacterium HdN1] Length = 393 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ +EIS FR ++ I A L V G NG GK+SL EA+ L G + R + S Sbjct: 3 IVKLEISDFRNLKAVE-IAPAQGLNWVVGPNGSGKTSLLEALHLLATGKSFRANNLRSCI 61 Query: 89 KRSIKTPMPMCM 100 + KT +C+ Sbjct: 62 RGGAKTCRVVCL 73 >gi|300707107|ref|XP_002995776.1| hypothetical protein NCER_101251 [Nosema ceranae BRL01] gi|239604988|gb|EEQ82105.1| hypothetical protein NCER_101251 [Nosema ceranae BRL01] Length = 871 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 28/45 (62%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++K+ +EI++F+ + I F H T + G NG GKS++ +A+ Sbjct: 1 MYKIKSLEITNFKSYKSSHVIPFDSHFTCIIGPNGSGKSNILDAM 45 >gi|192359535|ref|YP_001982385.1| chromosome segregation protein SMC [Cellvibrio japonicus Ueda107] gi|190685700|gb|ACE83378.1| chromosome segregation protein SMC [Cellvibrio japonicus Ueda107] Length = 1169 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 34/60 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+++ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGENM 61 >gi|332705175|ref|ZP_08425257.1| exonuclease SbcC [Lyngbya majuscula 3L] gi|332356125|gb|EGJ35583.1| exonuclease SbcC [Lyngbya majuscula 3L] Length = 1006 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 21/37 (56%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H + GQNG GKSSL EAI W +G ++ D I Sbjct: 25 HTACICGQNGAGKSSLLEAITWAIWGQSRVASENDII 61 >gi|309809478|ref|ZP_07703336.1| putative chromosome partition protein smc [Lactobacillus iners SPIN 2503V10-D] gi|308170150|gb|EFO72185.1| putative chromosome partition protein smc [Lactobacillus iners SPIN 2503V10-D] Length = 743 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|295402808|ref|ZP_06812744.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294975154|gb|EFG50796.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 648 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I +F+ F+E + IEF + L ++ G N GK+++ +AIE++F Sbjct: 8 IKNFKCFSEFE-IEFNEGLNVIIGSNNSGKTTIIKAIEYIF 47 >gi|289523384|ref|ZP_06440238.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503076|gb|EFD24240.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 1140 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + + F+ F E IE ++ T++ G NG GKS++ +A+ W Sbjct: 10 VALKGFKSFGEQVDIELSEKYTVIAGPNGSGKSNILDAVRW 50 >gi|226193270|ref|ZP_03788880.1| RecF/RecN/SMC N domain protein [Burkholderia pseudomallei Pakistan 9] gi|225934870|gb|EEH30847.1| RecF/RecN/SMC N domain protein [Burkholderia pseudomallei Pakistan 9] Length = 774 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +TS R I KL + I +FR ++I + +L++V G N GKSS+ EAI Sbjct: 81 ITSIDQRGAIMKLRRVVIKNFRKLSDID-FSISKNLSVVVGPNASGKSSIFEAI 133 >gi|291539669|emb|CBL12780.1| condensin subunit Smc [Roseburia intestinalis XB6B4] Length = 1186 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGASMQ 62 >gi|291535140|emb|CBL08252.1| condensin subunit Smc [Roseburia intestinalis M50/1] Length = 1186 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGASMQ 62 >gi|187477569|ref|YP_785593.1| chromosome partition protein [Bordetella avium 197N] gi|115422155|emb|CAJ48679.1| putative chromosome partition protein [Bordetella avium 197N] Length = 1198 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++Y R +L ++++ F+ F + I L V G NG GKS++ +A+ W+ Sbjct: 14 STYPVRHPTVRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEA 73 Query: 78 TQRRKHGDSIK 88 G+S++ Sbjct: 74 KASELRGESMQ 84 >gi|15615066|ref|NP_243369.1| ribosome-associated GTPase [Bacillus halodurans C-125] gi|38257772|sp|Q9K9Z1|RSGA_BACHD RecName: Full=Putative ribosome biogenesis GTPase RsgA gi|10175123|dbj|BAB06222.1| BH2503 [Bacillus halodurans C-125] Length = 294 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 G I+K EF DH++++ GQ+G GKSSL AI Sbjct: 149 GLDAIRK-EFDDHVSVIAGQSGVGKSSLLNAI 179 >gi|332981632|ref|YP_004463073.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON] gi|332699310|gb|AEE96251.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON] Length = 1188 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI F+ F + I+ +T + G NG GKS++++AI W+ Sbjct: 6 IEIYGFKSFADKIDIDLLPGITAIVGPNGSGKSNIADAIRWVL 48 >gi|311992855|ref|YP_004009722.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj61] gi|295815144|gb|ADG36070.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj61] Length = 559 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHG---DSIKKRSIKT 94 G TEI+ A H T++ G+NG GKS++ EAI + +G R K G +S+ K+++ Sbjct: 18 GDTEIRIALDAHHKTLITGKNGGGKSTMLEAITFALFGKPFRDIKKGQLVNSVTKKALLV 77 Query: 95 PMPM 98 + M Sbjct: 78 ELAM 81 >gi|257452988|ref|ZP_05618287.1| RECF protein [Fusobacterium sp. 3_1_5R] gi|317059528|ref|ZP_07924013.1| RECF protein [Fusobacterium sp. 3_1_5R] gi|313685204|gb|EFS22039.1| RECF protein [Fusobacterium sp. 3_1_5R] Length = 364 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I+++H R Q+I + + + G+NG GK+S+ EAI + G + R KH + Sbjct: 2 KVLSIQLNHVRNLKN-QEIIISSPIQVFYGKNGQGKTSILEAIYFAATGLSFRTKHSSEM 60 >gi|227548531|ref|ZP_03978580.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] gi|227079360|gb|EEI17323.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] Length = 239 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%) Query: 29 LLDIE-ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L D+ + H R E+ ++E A +T++ G NG GKS+L AI YGY+ Sbjct: 22 LFDVPAVKHLR---ELGRLELAQPVTVITGDNGVGKSTLLNAIAR-GYGYS 68 >gi|220927491|ref|YP_002504400.1| hypothetical protein Ccel_0032 [Clostridium cellulolyticum H10] gi|219997819|gb|ACL74420.1| conserved hypothetical protein [Clostridium cellulolyticum H10] Length = 664 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 30 LDIEISHFRGFTEIQKI--EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I+ H RGF ++Q +F+D L ++ G N GKS+L I+ + YG Sbjct: 1 MKIKRLHVRGFGKLQDFNCDFSDGLNVIYGHNESGKSTLMAFIKAILYG 49 >gi|74317246|ref|YP_314986.1| condensin subunit Smc [Thiobacillus denitrificans ATCC 25259] gi|74056741|gb|AAZ97181.1| Chromosome segregation protein SMC [Thiobacillus denitrificans ATCC 25259] Length = 1165 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + I LT V G NG GKS++ +A+ W+ + + G+++ Sbjct: 2 RLTHIKLAGFKSFVDPTVIPVPAQLTGVVGPNGCGKSNVIDAVRWVLGESSAKHLRGETM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|330719970|gb|EGG98424.1| hypothetical protein imdm_26 [gamma proteobacterium IMCC2047] Length = 595 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L K L S ++ K + I +FR Q ++ + LTIV G N GK+++ +AIE Sbjct: 12 LIKLLVSNRYTRVDMKFDSLRIRNFRTLGNEQFVDLRNGLTIV-GPNSSGKTNILKAIEM 70 Query: 73 LFYGY 77 +F GY Sbjct: 71 IFTGY 75 >gi|150020781|ref|YP_001306135.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] gi|149793302|gb|ABR30750.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] Length = 1153 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 25/38 (65%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F + KI + ++T + G NG GKS++ EAI+W+ Sbjct: 13 FKSFGKPTKIPISPNITAIVGPNGSGKSNIVEAIQWVL 50 >gi|257414054|ref|ZP_04745105.2| putative cell division protein Smc [Roseburia intestinalis L1-82] gi|257201360|gb|EEU99644.1| putative cell division protein Smc [Roseburia intestinalis L1-82] Length = 1190 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ G S++ Sbjct: 7 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGASMQ 66 >gi|121611377|ref|YP_999184.1| chromosome segregation protein SMC [Verminephrobacter eiseniae EF01-2] gi|121556017|gb|ABM60166.1| chromosome segregation protein SMC [Verminephrobacter eiseniae EF01-2] Length = 1175 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSIKLSGFKSFAEPTTFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|323141212|ref|ZP_08076113.1| chromosome segregation protein SMC [Phascolarctobacterium sp. YIT 12067] gi|322414355|gb|EFY05173.1| chromosome segregation protein SMC [Phascolarctobacterium sp. YIT 12067] Length = 1189 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F + ++ F +T V G NG GKS++S+AI W+ Sbjct: 11 FKSFADKTELTFDKGITAVVGPNGSGKSNISDAIRWVL 48 >gi|240103799|ref|YP_002960108.1| chromosome segregation protein [Thermococcus gammatolerans EJ3] gi|239911353|gb|ACS34244.1| DNA double-strand break repair rad50 ATPase (rad50) [Thermococcus gammatolerans EJ3] Length = 885 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ IEI +FR + +EF+D + ++ GQNG GKSS+ EAI Sbjct: 2 RVRKIEIRNFRAHRK-SIVEFSDGINLIIGQNGAGKSSILEAI 43 >gi|325103652|ref|YP_004273306.1| chromosome segregation protein SMC [Pedobacter saltans DSM 12145] gi|324972500|gb|ADY51484.1| chromosome segregation protein SMC [Pedobacter saltans DSM 12145] Length = 1179 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ Sbjct: 2 QLNKLEIKGFKSFGDKITINFNEGVTAIVGPNGCGKSNVVDAIRWVL 48 >gi|237722508|ref|ZP_04552989.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448318|gb|EEO54109.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 524 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 11/68 (16%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + IS FRGF + E D +T++ GQNG K++L + F R H ++ Sbjct: 6 VHISKFRGFANAE-FEMGDQITVIAGQNGTQKTTLLGILSQTF----SLRGH------KT 54 Query: 92 IKTPMPMC 99 + T P+C Sbjct: 55 MNTAKPLC 62 >gi|229816999|ref|ZP_04447281.1| hypothetical protein BIFANG_02254 [Bifidobacterium angulatum DSM 20098] gi|229785744|gb|EEP21858.1| hypothetical protein BIFANG_02254 [Bifidobacterium angulatum DSM 20098] Length = 384 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + HFR + ++ ++F + ++ G NG GK++L EA+E L G + R Sbjct: 6 LALDHFRSWNQVV-VDFTPGVNVLYGANGLGKTNLVEAVEVLSTGGSHR 53 >gi|152992321|ref|YP_001358042.1| DNA double-strand break repair protein [Sulfurovum sp. NBC37-1] gi|151424182|dbj|BAF71685.1| DNA double-strand break repair protein [Sulfurovum sp. NBC37-1] Length = 788 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ + + ++FA+ LT + G+NG GKS++ +AI + YG + K Sbjct: 3 LTSLHMQNYKKYRDFS-LDFAEGLTGIIGRNGSGKSTIFDAITFALYGDVRGEKETIRYA 61 Query: 89 KRSIKTPMPMCM 100 K +K P+ + + Sbjct: 62 KADVKEPVKVTL 73 >gi|303233285|ref|ZP_07319956.1| chromosome segregation protein SMC [Atopobium vaginae PB189-T1-4] gi|302480585|gb|EFL43674.1| chromosome segregation protein SMC [Atopobium vaginae PB189-T1-4] Length = 1203 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ F + I F L+++ G NG GKS++S+AI W+ Sbjct: 3 LASLTLKGFKSFADKTSIVFDPGLSVIVGPNGSGKSNISDAILWVL 48 >gi|301060264|ref|ZP_07201131.1| RecF/RecN/SMC N-terminal domain protein [delta proteobacterium NaphS2] gi|300445776|gb|EFK09674.1| RecF/RecN/SMC N-terminal domain protein [delta proteobacterium NaphS2] Length = 402 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 38 RGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 RGF I++I+F + ++ G NG GKS+L EAI + R +++ +R ++ + Sbjct: 8 RGFKSIERIQFEPGRVNVLIGSNGSGKSNLLEAIG-VLSAAVHGRVDDEALSRRGVRLGV 66 Query: 97 PMCMAVPRCKY 107 P A+ +C + Sbjct: 67 P---ALFKCSF 74 >gi|284105821|ref|ZP_06386225.1| chromosome segregation protein SMC [Candidatus Poribacteria sp. WGA-A3] gi|283830108|gb|EFC34374.1| chromosome segregation protein SMC [Candidatus Poribacteria sp. WGA-A3] Length = 1216 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL + +S F+ F E +++F +T V G NG GKS++ +AI W+ Sbjct: 2 KLKSLLVSGFKSFPE-ARLDFPQGITAVVGPNGVGKSNVVDAILWVL 47 >gi|221194733|ref|ZP_03567790.1| chromosome segregation protein SMC [Atopobium rimae ATCC 49626] gi|221185637|gb|EEE18027.1| chromosome segregation protein SMC [Atopobium rimae ATCC 49626] Length = 1182 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 F+ F + + F LT+V G NG GKS++S+AI W+ + + G +++ Sbjct: 11 FKSFADKTHMVFDPGLTVVVGPNGSGKSNVSDAILWVLGEQSAKMLRGQAME 62 >gi|304436510|ref|ZP_07396484.1| possible chromosome segregation protein Smc [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370556|gb|EFM24207.1| possible chromosome segregation protein Smc [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 1186 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFAERIVVQFDQGITAVVGPNGSGKSNITDAVRWVL 48 >gi|163847799|ref|YP_001635843.1| SMC domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525668|ref|YP_002570139.1| SMC domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669088|gb|ABY35454.1| SMC domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449547|gb|ACM53813.1| SMC domain protein [Chloroflexus sp. Y-400-fl] Length = 1032 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 H+ ++G+NG GKS+L +AI W +G RR D I + + + + A+ KY++ Sbjct: 31 HVLCLSGENGAGKSTLLDAITWALWG-EARRPDDDLITQGETEMMVELVFALDGRKYRV 88 >gi|238926794|ref|ZP_04658554.1| chromosome segregation protein Smc [Selenomonas flueggei ATCC 43531] gi|238885326|gb|EEQ48964.1| chromosome segregation protein Smc [Selenomonas flueggei ATCC 43531] Length = 1186 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFAERIVVQFDQGITAVVGPNGSGKSNITDAVRWVL 48 >gi|163744745|ref|ZP_02152105.1| chromosome segregation protein, putative [Oceanibulbus indolifex HEL-45] gi|161381563|gb|EDQ05972.1| chromosome segregation protein, putative [Oceanibulbus indolifex HEL-45] Length = 1151 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLVISDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|257466632|ref|ZP_05630943.1| RECF protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917786|ref|ZP_07914026.1| DNA replication and repair protein recF [Fusobacterium gonidiaformans ATCC 25563] gi|313691661|gb|EFS28496.1| DNA replication and repair protein recF [Fusobacterium gonidiaformans ATCC 25563] Length = 364 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I+++H R Q+I + + + G+NG GK+S+ EAI + G + R KH + Sbjct: 2 KVLSIQLNHVRNLKN-QEIIISSPIQVFYGKNGQGKTSILEAIYFAATGLSFRTKHSSEM 60 >gi|154250041|ref|YP_001410866.1| DNA replication and repair protein RecF [Fervidobacterium nodosum Rt17-B1] gi|154153977|gb|ABS61209.1| DNA replication and repair protein RecF [Fervidobacterium nodosum Rt17-B1] Length = 339 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + +FR F+E + + F D + ++ G NG GK+S+ EAI +L Sbjct: 11 LRLRNFRCFSEYE-VNFKDGINVIYGPNGAGKTSILEAIAYL 51 >gi|302843706|ref|XP_002953394.1| structural maintenance of chromosomes protein 6 [Volvox carteri f. nagariensis] gi|300261153|gb|EFJ45367.1| structural maintenance of chromosomes protein 6 [Volvox carteri f. nagariensis] Length = 1276 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 23/27 (85%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++EF H+T+V+GQNG GKS++ +A++ Sbjct: 189 EMEFGPHVTLVSGQNGSGKSAVVQALQ 215 >gi|326791394|ref|YP_004309215.1| chromosome segregation protein SMC [Clostridium lentocellum DSM 5427] gi|326542158|gb|ADZ84017.1| chromosome segregation protein SMC [Clostridium lentocellum DSM 5427] Length = 1196 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI F+ F + K+ +T V G NG GKS++++AI W+ Sbjct: 6 IEIHGFKSFGDAVKLNIPKGITGVIGPNGSGKSNVADAIRWVL 48 >gi|313888471|ref|ZP_07822138.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845500|gb|EFR32894.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 1173 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ F KIE + T + G NG GKS++++AI W+ Sbjct: 3 LKSVTMQGFKSFANRTKIELDETTTAIVGPNGSGKSNITDAITWVL 48 >gi|218752980|ref|ZP_03531776.1| hypothetical protein MtubG1_05830 [Mycobacterium tuberculosis GM 1503] gi|289761430|ref|ZP_06520808.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708936|gb|EFD72952.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length = 214 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL 48 >gi|331235125|ref|XP_003330223.1| hypothetical protein PGTG_11133 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309213|gb|EFP85804.1| hypothetical protein PGTG_11133 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1239 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ +F+ + +Q I H T V G NG GKS+L +AI ++ Sbjct: 3 LHSVEVDNFKSYKGVQTIGPFKHFTAVIGPNGAGKSNLMDAISFVL 48 >gi|307298907|ref|ZP_07578709.1| SMC domain protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915332|gb|EFN45717.1| SMC domain protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 945 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I++ +FR + + F + ++ G+NG GKSS+ EAI +G R K D+I Sbjct: 2 RVTSIDLENFRSHSRYSET-FEKGINLILGRNGSGKSSIIEAIGLALFGGGLRDKQEDAI 60 Query: 88 K 88 K Sbjct: 61 K 61 >gi|296166191|ref|ZP_06848632.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898439|gb|EFG78004.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 812 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 29 LLDIEISHFRGF-TEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I ++ FRG E+ ++ LT++ G+NG GKS+L+EA+E G R K G S Sbjct: 69 LESISVAGFRGIGPEVTVPLQPGPGLTVIAGRNGSGKSTLAEALELALTGVNSRWK-GKS 127 Query: 87 I 87 + Sbjct: 128 V 128 >gi|227498786|ref|ZP_03928926.1| recombination protein F [Acidaminococcus sp. D21] gi|226904238|gb|EEH90156.1| recombination protein F [Acidaminococcus sp. D21] Length = 377 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + HFR + ++ + + LT++ G+N GK++L E + + G++ R +H + + K Sbjct: 1 MRLHHFRNYGDLT-MNLSHDLTVIYGRNAQGKTNLLEGLYYAAMGFSFRSRHDEELVK 57 >gi|81300854|ref|YP_401062.1| condensin subunit Smc [Synechococcus elongatus PCC 7942] gi|81169735|gb|ABB58075.1| condensin subunit Smc [Synechococcus elongatus PCC 7942] Length = 1195 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 23/39 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE+SHF+ F + T+V G NG GKS++ +A+ Sbjct: 7 IELSHFKSFGGTTSLPLLPEFTVVTGPNGSGKSNILDAL 45 >gi|37522431|ref|NP_925808.1| hypothetical protein glr2862 [Gloeobacter violaceus PCC 7421] gi|35213432|dbj|BAC90803.1| glr2862 [Gloeobacter violaceus PCC 7421] Length = 1002 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +S+F + + +++F+ H + G NG GKSSL EA+ W+ +G ++ D ++ Sbjct: 4 LHLSLSNFLSYRD-GRLDFSGIHTACICGANGSGKSSLLEALTWVLWGKSRADSDDDVVR 62 Query: 89 K 89 + Sbjct: 63 R 63 >gi|312898599|ref|ZP_07757989.1| segregation protein SMC [Megasphaera micronuciformis F0359] gi|310620518|gb|EFQ04088.1| segregation protein SMC [Megasphaera micronuciformis F0359] Length = 1180 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ F+ F + + F +T + G NG GKS++S+A+ W+ R+ G Sbjct: 1 MELRGFKSFADKTTLTFDKGITAIVGPNGSGKSNISDAVRWVMGEQNVRQLRG 53 >gi|238916989|ref|YP_002930506.1| chromosome segregation protein [Eubacterium eligens ATCC 27750] gi|238872349|gb|ACR72059.1| chromosome segregation protein [Eubacterium eligens ATCC 27750] Length = 1189 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ + ++ G ++ Sbjct: 3 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSKME 62 >gi|237797328|ref|ZP_04585789.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020178|gb|EGI00235.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 1011 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L I +S+ R F KIE + TI+ NG GK+++ EA+E+ G R Sbjct: 3 QLKSITLSNIRRFGAETKIELSRGATILLAPNGTGKTAIFEAVEFALTGKISR 55 >gi|210612576|ref|ZP_03289367.1| hypothetical protein CLONEX_01569 [Clostridium nexile DSM 1787] gi|210151501|gb|EEA82508.1| hypothetical protein CLONEX_01569 [Clostridium nexile DSM 1787] Length = 1186 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|162453954|ref|YP_001616321.1| hypothetical protein sce5678 [Sorangium cellulosum 'So ce 56'] gi|161164536|emb|CAN95841.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 900 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Query: 23 RKLIFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 R+ I ++ + +S+FRG+ T +I+ L ++ G NG GKSSL +A+ Sbjct: 225 RRFIERVHKVNLSNFRGWCGTNEHEIDVDADLVLLTGANGQGKSSLLQAV 274 >gi|121998015|ref|YP_001002802.1| DNA replication and repair protein RecF [Halorhodospira halophila SL1] gi|121589420|gb|ABM62000.1| DNA replication and repair protein RecF [Halorhodospira halophila SL1] Length = 349 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ FR + Q + HL +V G NG GK+SL EAI +L + R + D + Sbjct: 4 LEVHGFRNLADTQ-LRPHPHLNVVTGPNGAGKTSLLEAIYFLSRVRSFRTRQNDRL 58 >gi|320334215|ref|YP_004170926.1| SMC domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755504|gb|ADV67261.1| SMC domain protein [Deinococcus maricopensis DSM 21211] Length = 910 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + + F F + ++F+D L + GQ G GKS+L +A+ + YG T R Sbjct: 4 LRLTVQGFMPFRQHADVDFSDMELYAIQGQTGSGKSALLDAMTFALYGSTPR 55 >gi|23097459|ref|NP_690925.1| recombination protein F [Oceanobacillus iheyensis HTE831] gi|51316469|sp|Q8EU85|RECF_OCEIH RecName: Full=DNA replication and repair protein recF gi|22775682|dbj|BAC11960.1| DNA repair and genetic recombination [Oceanobacillus iheyensis HTE831] Length = 369 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E++++R + +++ I F D + ++ G+N GK++L EAI L + + R Sbjct: 6 LELTNYRNYDQLE-IAFDDQINVIIGENAQGKTNLMEAIYVLSFARSHR 53 >gi|268608883|ref|ZP_06142610.1| structural maintenance of chromosome protein (chromosome segregation ATPase), putative [Ruminococcus flavefaciens FD-1] Length = 1190 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + + F LT V G NG GKS++ +++ W+ + + G+ ++ Sbjct: 3 LKSLEIQGFKSFPDKISLTFDKGLTAVVGPNGSGKSNIGDSVRWVLGEQSTKTLRGNKME 62 >gi|160902796|ref|YP_001568377.1| SMC domain-containing protein [Petrotoga mobilis SJ95] gi|160360440|gb|ABX32054.1| SMC domain protein [Petrotoga mobilis SJ95] Length = 1174 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KLL +EI F+ F ++ + G NG GKS++ +AI WL +Q++ Sbjct: 1 MKLLSLEIEGFKSFGRRTYFNLDKNIIAIIGPNGSGKSNIVDAIRWLLGEQSQKQ 55 >gi|257462456|ref|ZP_05626868.1| RECF protein [Fusobacterium sp. D12] gi|317060113|ref|ZP_07924598.1| DNA replication and repair protein recF [Fusobacterium sp. D12] gi|313685789|gb|EFS22624.1| DNA replication and repair protein recF [Fusobacterium sp. D12] Length = 248 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++L I+ +H R QKI F + + G+NG GK+S+ EAI + G + R +H Sbjct: 2 RVLSIQCNHIRNLKN-QKISFCAPIQVFYGKNGQGKTSILEAIYFAGTGLSFRTRH 56 >gi|153868967|ref|ZP_01998681.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152074461|gb|EDN71313.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 159 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +FRGF +++ +EF LT++ G+NG GK+++ + + L + ++ Sbjct: 14 KVRKIILENFRGFEQLE-LEFQSDLTVLIGENGAGKTTILDGLAKLLLIFEKK 65 >gi|187924441|ref|YP_001896083.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] gi|187715635|gb|ACD16859.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] Length = 1198 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLCRRTAGAAFTSHLFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQ 88 >gi|86152093|ref|ZP_01070305.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni 260.94] gi|85840878|gb|EAQ58128.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni 260.94] Length = 168 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K++ ++I +FR + ++F D LT G+N GKS++ EA++ F G + D Sbjct: 1 MKIIQVKIKNFRSYVNEVIVDFED-LTAFVGKNDIGKSTILEALDIFFDGGVIKIDKND- 58 Query: 87 IKKRSIKT 94 I K +K Sbjct: 59 INKECVKN 66 >gi|46124223|ref|XP_386665.1| hypothetical protein FG06489.1 [Gibberella zeae PH-1] Length = 1062 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I++F G + I+F + LT++ G NG GKS++ EAI W +G R Sbjct: 452 LTITNFLGVQHVITIDFRNDFPRGLTLLVGDNGSGKSTIVEAIVWCQFGRCIR 504 >gi|227820724|ref|YP_002824694.1| hypothetical protein NGR_c01380 [Sinorhizobium fredii NGR234] gi|227339723|gb|ACP23941.1| hypothetical protein NGR_c01380 [Sinorhizobium fredii NGR234] Length = 1018 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+S+FR + + E +T++ G NG GK+S + +EW G R Sbjct: 6 LRSVELSNFRVYGDSYVFELPAEPGVTLITGANGLGKTSFFDGVEWALTGQVGR 59 >gi|116623517|ref|YP_825673.1| condensin subunit Smc [Candidatus Solibacter usitatus Ellin6076] gi|116226679|gb|ABJ85388.1| condensin subunit Smc [Candidatus Solibacter usitatus Ellin6076] Length = 1210 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + KL +E+ F+ F + ++ F + + + G NG GKS++S+AI W+ Sbjct: 1 MLKLKRVELQGFKSFCDRTELRFNGEGIAAIVGPNGCGKSNISDAISWVL 50 >gi|298524781|ref|ZP_07012190.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494575|gb|EFI29869.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 841 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|257440764|ref|ZP_05616519.1| putative ATP binding protein [Faecalibacterium prausnitzii A2-165] gi|257196738|gb|EEU95022.1| putative ATP binding protein [Faecalibacterium prausnitzii A2-165] Length = 417 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL + + F+G+ E Q + T++ G NG GKS++ AI +L + R + I Sbjct: 2 KLTSLYVHDFKGYREHQ-FDLLGKSTVLFGVNGAGKSTVLTAINYLMWPVLNRLSNTQGI 60 Query: 88 KKRSIKT 94 RS+ T Sbjct: 61 AFRSLNT 67 >gi|219557174|ref|ZP_03536250.1| hypothetical protein MtubT1_07675 [Mycobacterium tuberculosis T17] Length = 438 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|215403117|ref|ZP_03415298.1| hypothetical protein Mtub0_05356 [Mycobacterium tuberculosis 02_1987] gi|289745023|ref|ZP_06504401.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289685551|gb|EFD53039.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length = 875 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|254364175|ref|ZP_04980221.1| hypothetical protein TBHG_01262 [Mycobacterium tuberculosis str. Haarlem] gi|134149689|gb|EBA41734.1| hypothetical protein TBHG_01262 [Mycobacterium tuberculosis str. Haarlem] Length = 875 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|148822495|ref|YP_001287249.1| hypothetical protein TBFG_11304 [Mycobacterium tuberculosis F11] gi|253799677|ref|YP_003032678.1| hypothetical protein TBMG_02703 [Mycobacterium tuberculosis KZN 1435] gi|254550284|ref|ZP_05140731.1| hypothetical protein Mtube_07469 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289554933|ref|ZP_06444143.1| hypothetical protein TBXG_02683 [Mycobacterium tuberculosis KZN 605] gi|297633827|ref|ZP_06951607.1| hypothetical protein MtubK4_06879 [Mycobacterium tuberculosis KZN 4207] gi|297730813|ref|ZP_06959931.1| hypothetical protein MtubKR_06964 [Mycobacterium tuberculosis KZN R506] gi|313658145|ref|ZP_07815025.1| hypothetical protein MtubKV_06979 [Mycobacterium tuberculosis KZN V2475] gi|148721022|gb|ABR05647.1| hypothetical protein TBFG_11304 [Mycobacterium tuberculosis F11] gi|253321180|gb|ACT25783.1| hypothetical protein TBMG_02703 [Mycobacterium tuberculosis KZN 1435] gi|289439565|gb|EFD22058.1| hypothetical protein TBXG_02683 [Mycobacterium tuberculosis KZN 605] gi|328459423|gb|AEB04846.1| hypothetical protein TBSG_02717 [Mycobacterium tuberculosis KZN 4207] Length = 875 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|15608418|ref|NP_215794.1| hypothetical protein Rv1278 [Mycobacterium tuberculosis H37Rv] gi|15840725|ref|NP_335762.1| hypothetical protein MT1315 [Mycobacterium tuberculosis CDC1551] gi|31792470|ref|NP_854963.1| hypothetical protein Mb1309 [Mycobacterium bovis AF2122/97] gi|121637206|ref|YP_977429.1| hypothetical protein BCG_1337 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661065|ref|YP_001282588.1| hypothetical protein MRA_1286 [Mycobacterium tuberculosis H37Ra] gi|215430162|ref|ZP_03428081.1| hypothetical protein MtubE_05673 [Mycobacterium tuberculosis EAS054] gi|224989681|ref|YP_002644368.1| hypothetical protein JTY_1312 [Mycobacterium bovis BCG str. Tokyo 172] gi|254231535|ref|ZP_04924862.1| hypothetical protein TBCG_01259 [Mycobacterium tuberculosis C] gi|260186213|ref|ZP_05763687.1| hypothetical protein MtubCP_09323 [Mycobacterium tuberculosis CPHL_A] gi|260200328|ref|ZP_05767819.1| hypothetical protein MtubT4_09418 [Mycobacterium tuberculosis T46] gi|260204532|ref|ZP_05772023.1| hypothetical protein MtubK8_09528 [Mycobacterium tuberculosis K85] gi|289442716|ref|ZP_06432460.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446872|ref|ZP_06436616.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289573940|ref|ZP_06454167.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289753354|ref|ZP_06512732.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|294994834|ref|ZP_06800525.1| hypothetical protein Mtub2_10067 [Mycobacterium tuberculosis 210] gi|306775446|ref|ZP_07413783.1| hypothetical protein TMAG_01910 [Mycobacterium tuberculosis SUMu001] gi|306781641|ref|ZP_07419978.1| hypothetical protein TMBG_01329 [Mycobacterium tuberculosis SUMu002] gi|306783998|ref|ZP_07422320.1| hypothetical protein TMCG_00908 [Mycobacterium tuberculosis SUMu003] gi|306788362|ref|ZP_07426684.1| hypothetical protein TMDG_01156 [Mycobacterium tuberculosis SUMu004] gi|306792688|ref|ZP_07430990.1| hypothetical protein TMEG_01174 [Mycobacterium tuberculosis SUMu005] gi|306797095|ref|ZP_07435397.1| hypothetical protein TMFG_02468 [Mycobacterium tuberculosis SUMu006] gi|306802975|ref|ZP_07439643.1| hypothetical protein TMHG_00462 [Mycobacterium tuberculosis SUMu008] gi|306807165|ref|ZP_07443833.1| hypothetical protein TMGG_01840 [Mycobacterium tuberculosis SUMu007] gi|306967364|ref|ZP_07480025.1| hypothetical protein TMIG_02952 [Mycobacterium tuberculosis SUMu009] gi|306971556|ref|ZP_07484217.1| hypothetical protein TMJG_03920 [Mycobacterium tuberculosis SUMu010] gi|307079269|ref|ZP_07488439.1| hypothetical protein TMKG_01775 [Mycobacterium tuberculosis SUMu011] gi|54040074|sp|P64796|Y1309_MYCBO RecName: Full=Uncharacterized protein Mb1309 gi|54042505|sp|P64795|Y1278_MYCTU RecName: Full=Uncharacterized protein Rv1278/MT1315 gi|1480308|emb|CAB00904.1| HYPOTHETICAL PROTEIN Rv1278 [Mycobacterium tuberculosis H37Rv] gi|13880915|gb|AAK45576.1| hypothetical protein MT1315 [Mycobacterium tuberculosis CDC1551] gi|31618059|emb|CAD94170.1| HYPOTHETICAL PROTEIN Mb1309 [Mycobacterium bovis AF2122/97] gi|121492853|emb|CAL71324.1| Hypothetical protein BCG_1337 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600594|gb|EAY59604.1| hypothetical protein TBCG_01259 [Mycobacterium tuberculosis C] gi|148505217|gb|ABQ73026.1| hypothetical protein MRA_1286 [Mycobacterium tuberculosis H37Ra] gi|224772794|dbj|BAH25600.1| hypothetical protein JTY_1312 [Mycobacterium bovis BCG str. Tokyo 172] gi|289415635|gb|EFD12875.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419830|gb|EFD17031.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289538371|gb|EFD42949.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289693941|gb|EFD61370.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|308216066|gb|EFO75465.1| hypothetical protein TMAG_01910 [Mycobacterium tuberculosis SUMu001] gi|308325602|gb|EFP14453.1| hypothetical protein TMBG_01329 [Mycobacterium tuberculosis SUMu002] gi|308331234|gb|EFP20085.1| hypothetical protein TMCG_00908 [Mycobacterium tuberculosis SUMu003] gi|308335050|gb|EFP23901.1| hypothetical protein TMDG_01156 [Mycobacterium tuberculosis SUMu004] gi|308338858|gb|EFP27709.1| hypothetical protein TMEG_01174 [Mycobacterium tuberculosis SUMu005] gi|308342543|gb|EFP31394.1| hypothetical protein TMFG_02468 [Mycobacterium tuberculosis SUMu006] gi|308346407|gb|EFP35258.1| hypothetical protein TMGG_01840 [Mycobacterium tuberculosis SUMu007] gi|308350349|gb|EFP39200.1| hypothetical protein TMHG_00462 [Mycobacterium tuberculosis SUMu008] gi|308354979|gb|EFP43830.1| hypothetical protein TMIG_02952 [Mycobacterium tuberculosis SUMu009] gi|308358926|gb|EFP47777.1| hypothetical protein TMJG_03920 [Mycobacterium tuberculosis SUMu010] gi|308362889|gb|EFP51740.1| hypothetical protein TMKG_01775 [Mycobacterium tuberculosis SUMu011] gi|323720234|gb|EGB29333.1| hypothetical protein TMMG_01973 [Mycobacterium tuberculosis CDC1551A] gi|326902899|gb|EGE49832.1| hypothetical protein TBPG_00754 [Mycobacterium tuberculosis W-148] Length = 875 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG + +EF DH + +V G N GKSS+ EA++ L ++ D Sbjct: 2 KLHRLALTNYRGIAH-RDVEFPDHGVVVVCGANEIGKSSMVEALDLLL-------EYKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 STKKEVKQVKP 64 >gi|303234050|ref|ZP_07320699.1| RecF/RecN/SMC N-terminal domain protein [Finegoldia magna BVS033A4] gi|302494975|gb|EFL54732.1| RecF/RecN/SMC N-terminal domain protein [Finegoldia magna BVS033A4] Length = 646 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL++++I +F+G + I+FA T ++G+NG GK+++ +A WL + + +I Sbjct: 4 KLIELKIENFKGIKNLV-IDFAK-TTHISGRNGIGKTTVFDAYSWLLWDKDSSNRKDFNI 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|189346970|ref|YP_001943499.1| SMC domain protein [Chlorobium limicola DSM 245] gi|189341117|gb|ACD90520.1| SMC domain protein [Chlorobium limicola DSM 245] Length = 423 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + K+ + + +FRG E+ + F LT++ NG GK+++ +A+ L T R + D Sbjct: 1 MMKIRTLRLINFRGIEELS-LPFESGLTVIAAVNGGGKTTVIDALAMLLSWLTARTRR-D 58 Query: 86 SIKKRSIK 93 S K R IK Sbjct: 59 SGKGRYIK 66 >gi|154149264|ref|YP_001406217.1| hypothetical protein CHAB381_0630 [Campylobacter hominis ATCC BAA-381] gi|153805273|gb|ABS52280.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381] Length = 513 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ +++ +FRG+++ + F D LT++ G+N GKS++ EA++ F Sbjct: 2 KIKSMKVKNFRGYSDEIIVNF-DDLTVIVGKNDVGKSTILEALDIFF 47 >gi|312796236|ref|YP_004029158.1| Chromosome partition protein smc [Burkholderia rhizoxinica HKI 454] gi|312168011|emb|CBW75014.1| Chromosome partition protein smc [Burkholderia rhizoxinica HKI 454] Length = 1189 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F ++ + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 19 RLTSIKLAGFKSFVDLTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGESM 78 Query: 88 K 88 + Sbjct: 79 Q 79 >gi|319762936|ref|YP_004126873.1| chromosome segregation protein smc [Alicycliphilus denitrificans BC] gi|330825016|ref|YP_004388319.1| chromosome segregation protein SMC [Alicycliphilus denitrificans K601] gi|317117497|gb|ADU99985.1| chromosome segregation protein SMC [Alicycliphilus denitrificans BC] gi|329310388|gb|AEB84803.1| chromosome segregation protein SMC [Alicycliphilus denitrificans K601] Length = 1174 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLAGFKSFAEPTNFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|91084903|ref|XP_969783.1| PREDICTED: similar to RAD50 homolog [Tribolium castaneum] gi|270009233|gb|EFA05681.1| rad50 [Tribolium castaneum] Length = 1309 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 4/46 (8%) Query: 32 IEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++IS R F Q I+FA LT++ GQNG GK+++ EAI+++ Sbjct: 7 LQISGVRSFGPNEEHCQTIKFATPLTLILGQNGSGKTTIIEAIKYV 52 >gi|309389187|gb|ADO77067.1| chromosome segregation protein SMC [Halanaerobium praevalens DSM 2228] Length = 1205 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I + F+ F IE +++T + G NG GKS++ +AI W+ Sbjct: 9 LKKIRLKGFKSFANKTDIEIEENITAIVGPNGSGKSNIVDAIRWVL 54 >gi|237736930|ref|ZP_04567411.1| chromosome partition protein smc [Fusobacterium mortiferum ATCC 9817] gi|229420792|gb|EEO35839.1| chromosome partition protein smc [Fusobacterium mortiferum ATCC 9817] Length = 1172 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F E IEF LT + G NG GKS++ +A+ W+ Sbjct: 6 VEIFGFKSFGERVYIEFNRGLTSIVGPNGSGKSNILDAVLWVL 48 >gi|226322325|ref|ZP_03797843.1| hypothetical protein COPCOM_00086 [Coprococcus comes ATCC 27758] gi|225209247|gb|EEG91601.1| hypothetical protein COPCOM_00086 [Coprococcus comes ATCC 27758] Length = 476 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|206895293|ref|YP_002246874.1| probable DNA double-strand break repair Rad50 ATPase, putative [Coprothermobacter proteolyticus DSM 5265] gi|206737910|gb|ACI16988.1| probable DNA double-strand break repair Rad50 ATPase, putative [Coprothermobacter proteolyticus DSM 5265] Length = 972 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Query: 32 IEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E+++F G + +EF + + ++ G NG GKSS+ EA+ + YG T R Sbjct: 6 LEVTNFLGLKNLS-LEFPEQGVFVITGPNGSGKSSILEAMYFALYGKTMR 54 >gi|312136567|ref|YP_004003904.1| smc domain protein [Methanothermus fervidus DSM 2088] gi|311224286|gb|ADP77142.1| SMC domain protein [Methanothermus fervidus DSM 2088] Length = 865 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL +E+ + R + +K+EF D +T+ G G GKS++ AIE+ +G Sbjct: 1 MKLKSLELKNIRSYK-YEKLEFNDGVTLFEGDIGSGKSTILLAIEFALFG 49 >gi|296116300|ref|ZP_06834916.1| chromosome partition protein SMC [Gluconacetobacter hansenii ATCC 23769] gi|295977119|gb|EFG83881.1| chromosome partition protein SMC [Gluconacetobacter hansenii ATCC 23769] Length = 1518 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +T+ +AR + I+ F+ F + IE LT + G NG GKS++ EA+ W Sbjct: 1 MTARFAR--------LRIAGFKSFADPASIEILPGLTGIVGPNGCGKSNVVEALRWTMGE 52 Query: 77 YTQRRKHG 84 + R G Sbjct: 53 TSARSLRG 60 >gi|167462694|ref|ZP_02327783.1| ATPase involved in DNA repair [Paenibacillus larvae subsp. larvae BRL-230010] Length = 510 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 +I F + LT + G+N GKSS+ EAI WLFY D + +S TP+ Sbjct: 20 EINFGE-LTKITGENTKGKSSILEAIPWLFYSV-------DMLGSKSDPTPI 63 >gi|323492776|ref|ZP_08097919.1| ATP-dependent endonuclease [Vibrio brasiliensis LMG 20546] gi|323312972|gb|EGA66093.1| ATP-dependent endonuclease [Vibrio brasiliensis LMG 20546] Length = 162 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 4/45 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 KL IEIS FRG I+++ A D LT + G+N +GKSSL +A+ Sbjct: 1 MKLERIEISGFRG---IKRLSIAFDELTTLIGENTWGKSSLLDAL 42 >gi|326202804|ref|ZP_08192671.1| hypothetical protein Cpap_2113 [Clostridium papyrosolvens DSM 2782] gi|325986881|gb|EGD47710.1| hypothetical protein Cpap_2113 [Clostridium papyrosolvens DSM 2782] Length = 664 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Query: 36 HFRGFTEIQKI--EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 H RGF +++ +F+D L ++ G N GKS+L I+ + YG Sbjct: 7 HVRGFGKLEDFTCDFSDGLNVIYGHNESGKSTLMAFIKAMLYG 49 >gi|315124282|ref|YP_004066286.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018004|gb|ADT66097.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 168 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K++ ++I +FR + ++F D LT G+N GKS++ EA++ F G + D Sbjct: 1 MKIIQVKIKNFRSYANEVIVDFED-LTAFVGKNDIGKSTILEALDIFFDGGVIKIDKND- 58 Query: 87 IKKRSIKT 94 I K +K Sbjct: 59 INKECVKN 66 >gi|298485964|ref|ZP_07004038.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159441|gb|EFI00488.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 597 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ I I +F+G + +E +T+V G NG GKSSL EAI + K GD Sbjct: 15 KIESIYIENFQGLSN-ANLELTAPITMVCGHNGAGKSSLKEAIGLALGEAARVAKKGD 71 >gi|256378727|ref|YP_003102387.1| ATP-dependent endonuclease of the OLD family- like protein [Actinosynnema mirum DSM 43827] gi|255923030|gb|ACU38541.1| ATP-dependent endonuclease of the OLD family- like protein [Actinosynnema mirum DSM 43827] Length = 648 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I +FR +++ + F D +T + G NG GKS++ A++W F G Sbjct: 2 RISKVRIKNFRCLADVE-VRF-DQVTTLIGPNGVGKSTVLRALDWFFNG 48 >gi|309808647|ref|ZP_07702539.1| chromosome partition protein smc family protein [Lactobacillus iners LactinV 01V1-a] gi|308168121|gb|EFO70247.1| chromosome partition protein smc family protein [Lactobacillus iners LactinV 01V1-a] Length = 338 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++++ Sbjct: 3 LKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGENMR 62 >gi|306820917|ref|ZP_07454537.1| recombination protein F [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551031|gb|EFM39002.1| recombination protein F [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 356 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/50 (26%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +I + ++R + + ++F++++ ++ GQNG GK+++ EA+ +L + + R Sbjct: 5 NINLKNYRNYENLS-LDFSENINMIIGQNGQGKTNIVEAVHFLSFAKSFR 53 >gi|219851419|ref|YP_002465851.1| SMC domain protein [Methanosphaerula palustris E1-9c] gi|219545678|gb|ACL16128.1| SMC domain protein [Methanosphaerula palustris E1-9c] Length = 623 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I IS ++ F E +I F+ L ++ G+NG GKSS+ +AI + Sbjct: 3 LEKISISGYKNFNENFEICFSSGLNVLVGENGVGKSSIIDAIRLIL 48 >gi|150401140|ref|YP_001324906.1| SMC domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013843|gb|ABR56294.1| SMC domain protein [Methanococcus aeolicus Nankai-3] Length = 994 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +I I +FR + I F +T + G+NG GKSS+ EA+ + + +R K D+IK+ Sbjct: 5 NINIKNFRSHSNTD-ISFKQGITTIIGENGSGKSSIFEAMNYALFA-PRRIKLSDAIKR 61 >gi|323144958|ref|ZP_08079518.1| conserved domain protein [Succinatimonas hippei YIT 12066] gi|322415237|gb|EFY06011.1| conserved domain protein [Succinatimonas hippei YIT 12066] Length = 632 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 EI +FRG + KI F + +++ G+N +GKSSL A+ W+ G ++ Sbjct: 7 EIFNFRGIRHL-KINFEEDSSVLIGENSWGKSSLLSAL-WMMLGTGEK 52 >gi|16800310|ref|NP_470578.1| hypothetical protein lin1241 [Listeria innocua Clip11262] gi|16413715|emb|CAC96472.1| lin1241 [Listeria innocua Clip11262] Length = 646 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KLL +++ +F+G E++ I+F + +I G N GK+++ +A WL + K +I Sbjct: 5 KLLKLQLENFKGIKELE-IDFENSTSIY-GANASGKTTIIDAFTWLLFDKDSTNKKDFAI 62 Query: 88 K 88 K Sbjct: 63 K 63 >gi|313674195|ref|YP_004052191.1| chromosome segregation protein smc [Marivirga tractuosa DSM 4126] gi|312940893|gb|ADR20083.1| chromosome segregation protein SMC [Marivirga tractuosa DSM 4126] Length = 1182 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +EI F+ F + I F +T + G NG GKS++ +AI W+ R D + Sbjct: 2 QLTKLEIKGFKSFGDRMVINFDKGITGIVGPNGCGKSNVVDAIRWVLGEQKSRMLRSDKM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|292670932|ref|ZP_06604358.1| chromosome segregation protein Smc [Selenomonas noxia ATCC 43541] gi|292647553|gb|EFF65525.1| chromosome segregation protein Smc [Selenomonas noxia ATCC 43541] Length = 1187 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFAERIVVQFDRGITAVVGPNGSGKSNITDAVRWVL 48 >gi|222444642|ref|ZP_03607157.1| hypothetical protein METSMIALI_00254 [Methanobrevibacter smithii DSM 2375] gi|222434207|gb|EEE41372.1| hypothetical protein METSMIALI_00254 [Methanobrevibacter smithii DSM 2375] Length = 917 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + +++F+ + + I+F D +T++ G+NG GKS++ EAI + + +K D ++ S Sbjct: 6 LTLNNFKSYGH-EVIKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRNGS 64 >gi|148642180|ref|YP_001272693.1| purine NTPase involved in DNA repair, Rad50 [Methanobrevibacter smithii ATCC 35061] gi|148551197|gb|ABQ86325.1| purine NTPase involved in DNA repair, Rad50 [Methanobrevibacter smithii ATCC 35061] Length = 917 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + +++F+ + + I+F D +T++ G+NG GKS++ EAI + + +K D ++ S Sbjct: 6 LTLNNFKSYGH-EVIKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRNGS 64 >gi|284045140|ref|YP_003395480.1| SMC domain protein [Conexibacter woesei DSM 14684] gi|283949361|gb|ADB52105.1| SMC domain protein [Conexibacter woesei DSM 14684] Length = 1081 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 27/44 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L + + F+ F + K+ F +++V G NG GKS++++A+ W Sbjct: 3 LKSLTLKGFKSFPDRTKLAFGSGVSVVVGPNGSGKSNVTDAVLW 46 >gi|261350818|ref|ZP_05976235.1| putative RecF/RecN/SMC N domain protein [Methanobrevibacter smithii DSM 2374] gi|288860436|gb|EFC92734.1| putative RecF/RecN/SMC N domain protein [Methanobrevibacter smithii DSM 2374] Length = 917 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + +++F+ + + I+F D +T++ G+NG GKS++ EAI + + +K D ++ S Sbjct: 6 LTLNNFKSYGH-EVIKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRNGS 64 >gi|323442326|gb|EGA99956.1| chromosome segregation SMC protein [Staphylococcus aureus O46] Length = 1188 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|323441009|gb|EGA98716.1| chromosome segregation SMC protein [Staphylococcus aureus O11] Length = 1188 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|307296240|ref|ZP_07576067.1| chromosome segregation protein SMC [Sphingobium chlorophenolicum L-1] gi|306878042|gb|EFN09265.1| chromosome segregation protein SMC [Sphingobium chlorophenolicum L-1] Length = 1147 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F + ++ LT + G NG GKS+L EAI W+ Sbjct: 6 LKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWV 47 >gi|301632521|ref|XP_002945332.1| PREDICTED: protein P115 homolog [Xenopus (Silurana) tropicalis] Length = 1168 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 88 RLQSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGESM 147 Query: 88 K 88 + Sbjct: 148 Q 148 >gi|294010077|ref|YP_003543537.1| chromosome segregation protein [Sphingobium japonicum UT26S] gi|292673407|dbj|BAI94925.1| chromosome segregation protein [Sphingobium japonicum UT26S] Length = 1147 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F + ++ LT + G NG GKS+L EAI W+ Sbjct: 6 LKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWV 47 >gi|159030661|emb|CAO88331.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 647 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Query: 44 QKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 Q I F H + I+ G NG+GK+SL I W YG GD + K ++KT Sbjct: 19 QNITFNLHPDRKIQIIFGNNGHGKTSLMTGILWCLYG-------GDIVPKETLKT 66 >gi|94496121|ref|ZP_01302699.1| Chromosome segregation protein SMC [Sphingomonas sp. SKA58] gi|94424300|gb|EAT09323.1| Chromosome segregation protein SMC [Sphingomonas sp. SKA58] Length = 1147 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +++S F+ F + ++ LT + G NG GKS+L EAI W+ Sbjct: 6 LKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWV 47 >gi|83855048|ref|ZP_00948578.1| SMC protein [Sulfitobacter sp. NAS-14.1] gi|83842891|gb|EAP82058.1| SMC protein [Sulfitobacter sp. NAS-14.1] Length = 1151 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLIISDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|83941571|ref|ZP_00954033.1| SMC protein [Sulfitobacter sp. EE-36] gi|83847391|gb|EAP85266.1| SMC protein [Sulfitobacter sp. EE-36] Length = 1151 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLIISDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|314936604|ref|ZP_07843951.1| SMC family, C- domain protein [Staphylococcus hominis subsp. hominis C80] gi|313655223|gb|EFS18968.1| SMC family, C- domain protein [Staphylococcus hominis subsp. hominis C80] Length = 1189 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDTIGFKSFADRTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|226940717|ref|YP_002795791.1| RecF [Laribacter hongkongensis HLHK9] gi|226715644|gb|ACO74782.1| RecF [Laribacter hongkongensis HLHK9] Length = 610 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL IE+ +F+G ++ +T++ G+NG GKSSL EA+ G Sbjct: 2 KLTRIEVQNFQGLRS-ARLALTTPVTLIAGRNGAGKSSLLEAVRMAMSG 49 >gi|283470447|emb|CAQ49658.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus ST398] Length = 1188 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|82750838|ref|YP_416579.1| chromosome segregation SMC protein [Staphylococcus aureus RF122] gi|82656369|emb|CAI80787.1| chromosome segregation SMC protein [Staphylococcus aureus RF122] Length = 1188 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|302332838|gb|ADL23031.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|298694527|gb|ADI97749.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus ED133] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|283770296|ref|ZP_06343188.1| chromosome segregation protein [Staphylococcus aureus subsp. aureus H19] gi|283460443|gb|EFC07533.1| chromosome segregation protein [Staphylococcus aureus subsp. aureus H19] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|282916484|ref|ZP_06324246.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus D139] gi|282319924|gb|EFB50272.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus D139] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|258423925|ref|ZP_05686810.1| chromosome segregation protein SMC [Staphylococcus aureus A9635] gi|257845954|gb|EEV69983.1| chromosome segregation protein SMC [Staphylococcus aureus A9635] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|253733528|ref|ZP_04867693.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus TCH130] gi|253728582|gb|EES97311.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus TCH130] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|257425288|ref|ZP_05601713.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427948|ref|ZP_05604346.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus 65-1322] gi|257430581|ref|ZP_05606963.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433342|ref|ZP_05609700.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus E1410] gi|257436184|ref|ZP_05612231.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M876] gi|282910806|ref|ZP_06318609.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WBG10049] gi|282914010|ref|ZP_06321797.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M899] gi|282918932|ref|ZP_06326667.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C427] gi|282924055|ref|ZP_06331731.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C101] gi|293501042|ref|ZP_06666893.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 58-424] gi|293526590|ref|ZP_06671275.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M1015] gi|257271745|gb|EEV03883.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274789|gb|EEV06276.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus 65-1322] gi|257278709|gb|EEV09328.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281435|gb|EEV11572.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus E1410] gi|257284466|gb|EEV14586.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M876] gi|282314027|gb|EFB44419.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C101] gi|282316742|gb|EFB47116.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C427] gi|282322078|gb|EFB52402.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M899] gi|282325411|gb|EFB55720.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WBG10049] gi|290920662|gb|EFD97725.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M1015] gi|291096047|gb|EFE26308.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 58-424] gi|312438388|gb|ADQ77459.1| SMC family domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|218296446|ref|ZP_03497189.1| SMC domain protein [Thermus aquaticus Y51MC23] gi|218243240|gb|EED09771.1| SMC domain protein [Thermus aquaticus Y51MC23] Length = 962 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F + E Q ++F+D L + G G GKS+L +A+ + YG R G S+K Sbjct: 4 LRLELEGFGPYREKQGVDFSDVELFAITGPTGSGKSTLLDAMAFALYGLVPRV--GKSVK 61 Query: 89 K 89 + Sbjct: 62 E 62 >gi|49483397|ref|YP_040621.1| chromosome partition protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282903788|ref|ZP_06311676.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus C160] gi|282905552|ref|ZP_06313407.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus Btn1260] gi|282908527|ref|ZP_06316357.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WW2703/97] gi|283957976|ref|ZP_06375427.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295427720|ref|ZP_06820352.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591321|ref|ZP_06949959.1| SMC family domain protein [Staphylococcus aureus subsp. aureus MN8] gi|49241526|emb|CAG40212.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282327589|gb|EFB57872.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330844|gb|EFB60358.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus Btn1260] gi|282595406|gb|EFC00370.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus C160] gi|283790125|gb|EFC28942.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295128078|gb|EFG57712.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576207|gb|EFH94923.1| SMC family domain protein [Staphylococcus aureus subsp. aureus MN8] gi|315194122|gb|EFU24515.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus CGS00] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|21282846|ref|NP_645934.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MW2] gi|49486073|ref|YP_043294.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297208122|ref|ZP_06924553.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912202|ref|ZP_07129645.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus TCH70] gi|21204285|dbj|BAB94982.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MW2] gi|49244516|emb|CAG42945.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887365|gb|EFH26267.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886448|gb|EFK81650.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus TCH70] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|15924224|ref|NP_371758.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926817|ref|NP_374350.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus N315] gi|148267725|ref|YP_001246668.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH9] gi|150393783|ref|YP_001316458.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH1] gi|156979555|ref|YP_001441814.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu3] gi|253315592|ref|ZP_04838805.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006021|ref|ZP_05144622.2| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795710|ref|ZP_05644689.1| chromosome segregation protein SMC [Staphylococcus aureus A9781] gi|258415934|ref|ZP_05682204.1| condensin subunit SMC [Staphylococcus aureus A9763] gi|258419681|ref|ZP_05682648.1| chromosome segregation protein SMC [Staphylococcus aureus A9719] gi|258444572|ref|ZP_05692901.1| condensin subunit Smc [Staphylococcus aureus A8115] gi|258447595|ref|ZP_05695739.1| chromosome segregation protein SMC [Staphylococcus aureus A6300] gi|258449437|ref|ZP_05697540.1| condensin subunit Smc [Staphylococcus aureus A6224] gi|258454816|ref|ZP_05702780.1| condensin subunit Smc [Staphylococcus aureus A5937] gi|269202850|ref|YP_003282119.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282892721|ref|ZP_06300956.1| chromosome segregation protein SMC [Staphylococcus aureus A8117] gi|282927575|ref|ZP_06335191.1| chromosome segregation protein SMC [Staphylococcus aureus A10102] gi|295407173|ref|ZP_06816974.1| chromosome segregation protein SMC [Staphylococcus aureus A8819] gi|296274791|ref|ZP_06857298.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MR1] gi|297245940|ref|ZP_06929799.1| chromosome segregation protein SMC [Staphylococcus aureus A8796] gi|13701034|dbj|BAB42329.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus N315] gi|14247004|dbj|BAB57396.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50] gi|147740794|gb|ABQ49092.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus JH9] gi|149946235|gb|ABR52171.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH1] gi|156721690|dbj|BAF78107.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu3] gi|257789682|gb|EEV28022.1| chromosome segregation protein SMC [Staphylococcus aureus A9781] gi|257839270|gb|EEV63744.1| condensin subunit SMC [Staphylococcus aureus A9763] gi|257844266|gb|EEV68648.1| chromosome segregation protein SMC [Staphylococcus aureus A9719] gi|257850065|gb|EEV74018.1| condensin subunit Smc [Staphylococcus aureus A8115] gi|257853786|gb|EEV76745.1| chromosome segregation protein SMC [Staphylococcus aureus A6300] gi|257857425|gb|EEV80323.1| condensin subunit Smc [Staphylococcus aureus A6224] gi|257863199|gb|EEV85963.1| condensin subunit Smc [Staphylococcus aureus A5937] gi|262075140|gb|ACY11113.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282590578|gb|EFB95655.1| chromosome segregation protein SMC [Staphylococcus aureus A10102] gi|282764718|gb|EFC04843.1| chromosome segregation protein SMC [Staphylococcus aureus A8117] gi|285816916|gb|ADC37403.1| Chromosome partition protein smc [Staphylococcus aureus 04-02981] gi|294968026|gb|EFG44054.1| chromosome segregation protein SMC [Staphylococcus aureus A8819] gi|297177104|gb|EFH36358.1| chromosome segregation protein SMC [Staphylococcus aureus A8796] gi|312829628|emb|CBX34470.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131027|gb|EFT87011.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus CGS03] gi|329727398|gb|EGG63854.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21172] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|315198473|gb|EFU28802.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus CGS01] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|284024158|ref|ZP_06378556.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 132] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|269940726|emb|CBI49107.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus TW20] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|262048132|ref|ZP_06021019.1| chromosome segregation SMC protein [Staphylococcus aureus D30] gi|259163698|gb|EEW48253.1| chromosome segregation SMC protein [Staphylococcus aureus D30] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|258434852|ref|ZP_05688926.1| condensin subunit Smc [Staphylococcus aureus A9299] gi|257849213|gb|EEV73195.1| condensin subunit Smc [Staphylococcus aureus A9299] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|257464155|ref|ZP_05628536.1| exonuclease SBCC [Fusobacterium sp. D12] gi|317061671|ref|ZP_07926156.1| exonuclease sbcc [Fusobacterium sp. D12] gi|313687347|gb|EFS24182.1| exonuclease sbcc [Fusobacterium sp. D12] Length = 921 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 1/39 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++ ++R +EI+ +EF+ + ++ G+NG GKSS+ EAI Sbjct: 6 VQLKNYRSHSEIE-VEFSRGINLILGRNGRGKSSILEAI 43 >gi|229170847|ref|ZP_04298454.1| ATPase involved in DNA repair [Bacillus cereus AH621] gi|228612620|gb|EEK69836.1| ATPase involved in DNA repair [Bacillus cereus AH621] Length = 182 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 18/26 (69%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +T ++ NG GKSS+ EAI W+ YG Sbjct: 5 EITTISDPNGAGKSSIGEAITWVLYG 30 >gi|170744955|ref|YP_001773610.1| chromosome segregation protein SMC [Methylobacterium sp. 4-46] gi|168199229|gb|ACA21176.1| chromosome segregation protein SMC [Methylobacterium sp. 4-46] Length = 1144 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L + I F+ F E ++ LT + G NG GKS+L EA+ W+ Sbjct: 2 RLTRLRIVGFKTFVEPSEVPIEPGLTGIIGPNGCGKSNLVEALRWV 47 >gi|91773466|ref|YP_566158.1| SMC-like protein [Methanococcoides burtonii DSM 6242] gi|91712481|gb|ABE52408.1| DNA-binding Structural Maintenance of Chromosomes Protein with ATPase domain [Methanococcoides burtonii DSM 6242] Length = 888 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 KL + + + R + ++ I F D +T+V+G NG GKSSL EA Sbjct: 2 KLKRVRVENIRSYIDLD-ISFDDGVTVVSGVNGSGKSSLLEA 42 >gi|57651803|ref|YP_186109.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87160811|ref|YP_493824.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194941|ref|YP_499741.1| SMC domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221356|ref|YP_001332178.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161509406|ref|YP_001575065.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142024|ref|ZP_03566517.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452532|ref|ZP_05700538.1| chromosome segregation protein SMC [Staphylococcus aureus A5948] gi|262051863|ref|ZP_06024079.1| chromosome segregation SMC protein [Staphylococcus aureus 930918-3] gi|282920017|ref|ZP_06327746.1| chromosome segregation protein SMC [Staphylococcus aureus A9765] gi|294848228|ref|ZP_06788975.1| chromosome segregation protein SMC [Staphylococcus aureus A9754] gi|304381202|ref|ZP_07363855.1| SMC family domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57285989|gb|AAW38083.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87126785|gb|ABD21299.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202499|gb|ABD30309.1| SMC family, C-terminal domain family [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374156|dbj|BAF67416.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368215|gb|ABX29186.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859750|gb|EEV82592.1| chromosome segregation protein SMC [Staphylococcus aureus A5948] gi|259160264|gb|EEW45292.1| chromosome segregation SMC protein [Staphylococcus aureus 930918-3] gi|282594733|gb|EFB99717.1| chromosome segregation protein SMC [Staphylococcus aureus A9765] gi|294825028|gb|EFG41450.1| chromosome segregation protein SMC [Staphylococcus aureus A9754] gi|302751057|gb|ADL65234.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340185|gb|EFM06126.1| SMC family domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140950|gb|EFW32797.1| segregation protein SMC [Staphylococcus aureus subsp. aureus MRSA131] gi|320144335|gb|EFW36101.1| segregation protein SMC [Staphylococcus aureus subsp. aureus MRSA177] gi|329313903|gb|AEB88316.1| Chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus T0131] gi|329724768|gb|EGG61273.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21189] gi|329733654|gb|EGG69982.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21193] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|296111977|ref|YP_003622359.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154] gi|295833509|gb|ADG41390.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154] Length = 788 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + K+ I IS F +++ Q+ +F D ++ GQN GKS++ I + +G+ ++ H + Sbjct: 1 MIKIKQIMISGFGRWSQ-QRFDFIDDFQVIVGQNESGKSTVRAFIVGMLFGFPTKKGHAN 59 >gi|293510002|ref|ZP_06668710.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M809] gi|291466946|gb|EFF09464.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M809] Length = 1188 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|160880575|ref|YP_001559543.1| chromosome segregation protein SMC [Clostridium phytofermentans ISDg] gi|160429241|gb|ABX42804.1| chromosome segregation protein SMC [Clostridium phytofermentans ISDg] Length = 1185 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVHGFKSFANKITFQFKNGITGIVGPNGSGKSNVADAVRWVL 48 >gi|313896552|ref|ZP_07830101.1| chromosome segregation protein SMC [Selenomonas sp. oral taxon 137 str. F0430] gi|312974737|gb|EFR40203.1| chromosome segregation protein SMC [Selenomonas sp. oral taxon 137 str. F0430] Length = 1187 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E F+ F + +EF +T V G NG GKS++++A+ W+ Sbjct: 2 QLKRLEAYGFKSFADRIVVEFDRGITAVVGPNGSGKSNITDAVRWVL 48 >gi|227523342|ref|ZP_03953391.1| recombination protein F [Lactobacillus hilgardii ATCC 8290] gi|227089448|gb|EEI24760.1| recombination protein F [Lactobacillus hilgardii ATCC 8290] Length = 373 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L DI + +FR + + Q ++F+D + + G+N GK++L EAI Y R H S Sbjct: 2 RLKDIALHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAI----YVLALTRSHRTSN 56 Query: 88 KKRSI 92 +K I Sbjct: 57 EKELI 61 >gi|227511155|ref|ZP_03941204.1| recombination protein F [Lactobacillus buchneri ATCC 11577] gi|227085637|gb|EEI20949.1| recombination protein F [Lactobacillus buchneri ATCC 11577] Length = 373 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L DI + +FR + + Q ++F+D + + G+N GK++L EAI Y R H S Sbjct: 2 RLKDIALHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAI----YVLALTRSHRTSN 56 Query: 88 KKRSI 92 +K I Sbjct: 57 EKELI 61 >gi|114561191|ref|YP_748704.1| DNA replication and repair protein RecF [Shewanella frigidimarina NCIMB 400] gi|122301223|sp|Q08A49|RECF_SHEFN RecName: Full=DNA replication and repair protein recF gi|114332484|gb|ABI69866.1| DNA replication and repair protein RecF [Shewanella frigidimarina NCIMB 400] Length = 360 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I I FR T ++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 6 INIGSFRNITS-ASLQPCDGLNLIYGQNGSGKTSILEAIYFLGMGRSFR 53 >gi|298490844|ref|YP_003721021.1| DNA replication and repair protein RecF ['Nostoc azollae' 0708] gi|298232762|gb|ADI63898.1| DNA replication and repair protein RecF ['Nostoc azollae' 0708] Length = 371 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 8/68 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKH--- 83 L + + FR + + QKIEF TI+ G N GKS+ EA+E L + R R H Sbjct: 3 LKTLHLRQFRNYQD-QKIEFTAPKTILVGNNAQGKSNFLEAVELLATLRSHRLARDHDLI 61 Query: 84 --GDSIKK 89 GD+I + Sbjct: 62 RDGDAIAQ 69 >gi|15922434|ref|NP_378103.1| purine NTPase [Sulfolobus tokodaii str. 7] gi|15623223|dbj|BAB67212.1| 882aa long hypothetical purine NTPase [Sulfolobus tokodaii str. 7] Length = 882 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 9/70 (12%) Query: 24 KLIFKLLDIE--ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR- 80 K+I + +DIE +SH R IEF + ++ G NG GKSS+ +AI + + + R Sbjct: 3 KMIIRRIDIENFLSHDRSL-----IEFKGTVNVIIGHNGAGKSSIIDAISFSLFRKSLRD 57 Query: 81 -RKHGDSIKK 89 +K D IK+ Sbjct: 58 AKKQEDLIKR 67 >gi|83589803|ref|YP_429812.1| condensin subunit Smc [Moorella thermoacetica ATCC 39073] gi|83572717|gb|ABC19269.1| condensin subunit Smc [Moorella thermoacetica ATCC 39073] Length = 1187 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI F+ F + ++E +T + G NG GKS++ +AI W+ Sbjct: 3 LKGIEIQGFKTFVDRVRLELGPGVTGIVGPNGSGKSNIVDAILWVL 48 >gi|331091060|ref|ZP_08339902.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 2_1_46FAA] gi|330405282|gb|EGG84818.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 2_1_46FAA] Length = 1186 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ ++ G S++ Sbjct: 3 LKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGSMQ 62 >gi|254820147|ref|ZP_05225148.1| hypothetical protein MintA_09481 [Mycobacterium intracellulare ATCC 13950] Length = 246 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + ++IEF DH + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLILTNYRGISH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|253731851|ref|ZP_04866016.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724450|gb|EES93179.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 1153 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|330960291|gb|EGH60551.1| ATP binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 441 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++R F E IEF LTI++ +NG GK+S+ EAI Sbjct: 8 LKNYRRFAEFD-IEFDPQLTIISARNGQGKTSVLEAI 43 >gi|182415724|ref|YP_001820790.1| chromosome segregation protein SMC [Opitutus terrae PB90-1] gi|177842938|gb|ACB77190.1| chromosome segregation protein SMC [Opitutus terrae PB90-1] Length = 1301 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +++ F+ F + + F +T V G NG GKS+++++I W+ + + G ++ Sbjct: 6 LKLHGFKSFADPTMLRFEPGVTAVVGPNGCGKSNIADSIRWVLGEQSAKALRGGKMQDVI 65 Query: 90 ---RSIKTPMPMC---MAVPRCKYQL 109 + P MC + + C+ QL Sbjct: 66 FEGADTRKPAQMCEVSLLLTECEKQL 91 >gi|161521384|ref|YP_001584811.1| ATP-dependent OLD family endonuclease [Burkholderia multivorans ATCC 17616] gi|189352449|ref|YP_001948076.1| probable bacteriophage protein [Burkholderia multivorans ATCC 17616] gi|327198026|ref|YP_004306395.1| gp28 [Burkholderia phage KS5] gi|160345434|gb|ABX18519.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia multivorans ATCC 17616] gi|189336471|dbj|BAG45540.1| probable bacteriophage protein [Burkholderia multivorans ATCC 17616] gi|310657160|gb|ADP02275.1| gp28 [Burkholderia phage KS5] Length = 626 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR ++ I F D +T + G NG GKS++ A++W F G Sbjct: 2 KIQSVRIKNFRTLKDV-AIPF-DSVTTLIGPNGTGKSTVLRALDWFFNG 48 >gi|110637995|ref|YP_678202.1| chromosome segregation protein, Smc family protein [Cytophaga hutchinsonii ATCC 33406] gi|28375463|emb|CAD66595.1| SMC protein [Cytophaga hutchinsonii] gi|110280676|gb|ABG58862.1| chromosome segregation protein, Smc family protein [Cytophaga hutchinsonii ATCC 33406] Length = 1178 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ R D + Sbjct: 2 QLSKLEIKGFKSFGDKVVINFDEGITGIVGPNGCGKSNVVDAIRWVLGEQKTRALRSDKM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|331002362|ref|ZP_08325880.1| hypothetical protein HMPREF0491_00742 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410178|gb|EGG89612.1| hypothetical protein HMPREF0491_00742 [Lachnospiraceae oral taxon 107 str. F0167] Length = 621 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL + I F F + ++F+D++ I+ G N GKS++ I+ +FYG Sbjct: 2 KLLSLHIDGFGKFKN-KDLQFSDNMNIIYGYNEAGKSTIFMFIKAMFYG 49 >gi|319892876|ref|YP_004149751.1| DNA double-strand break repair rad50 ATPase [Staphylococcus pseudintermedius HKU10-03] gi|317162572|gb|ADV06115.1| DNA double-strand break repair rad50 ATPase [Staphylococcus pseudintermedius HKU10-03] Length = 974 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI + F + +K+EF + T + GQN GKS+L I + +G+ ++++ + Sbjct: 2 KIKSVEIYGYGQFVQ-RKVEFDQYFTEIFGQNEAGKSTLQAFIHSILFGFPTKKENEPRL 60 Query: 88 KKR 90 + R Sbjct: 61 EPR 63 >gi|298708399|emb|CBJ48462.1| smc4 [Ectocarpus siliculosus] Length = 177 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 +KL + +S F+ +T ++ F D L+ + G NG GKS+L AI Sbjct: 34 YKLQSVTVSGFKSWTSTARVVFGHDGLSCITGPNGSGKSTLLNAI 78 >gi|127510938|ref|YP_001092135.1| DNA replication and repair protein RecF [Shewanella loihica PV-4] gi|166221864|sp|A3Q8S8|RECF_SHELP RecName: Full=DNA replication and repair protein recF gi|126636233|gb|ABO21876.1| DNA replication and repair protein RecF [Shewanella loihica PV-4] Length = 360 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I FR Q ++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 6 LHIDSFRNIASAQ-LQLGDGLNLIYGQNGSGKTSILEAIFFLGMGRSFR 53 >gi|145589638|ref|YP_001156235.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048044|gb|ABP34671.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1173 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 QLKSIKLSGFKSFVDPTHFEMPGQLIGVVGPNGCGKSNIIDAVRWVLGESRASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|329850283|ref|ZP_08265128.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19] gi|328840598|gb|EGF90169.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19] Length = 1156 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I++S F+ F + + LT + G NG GKS+L EA+ W+ + + G Sbjct: 6 IKLSGFKSFVDATEFRIDPGLTGIVGPNGCGKSNLLEALRWVMGATSAKAMRG 58 >gi|323464091|gb|ADX76244.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] Length = 974 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI + F + +K+EF + T + GQN GKS+L I + +G+ ++++ + Sbjct: 2 KIKSVEIYGYGQFVQ-RKVEFDQYFTEIFGQNEAGKSTLQAFIHSILFGFPTKKENEPRL 60 Query: 88 KKR 90 + R Sbjct: 61 EPR 63 >gi|239636287|ref|ZP_04677289.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] gi|239597642|gb|EEQ80137.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] Length = 1189 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAVGFKSFADHTDVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|226356599|ref|YP_002786339.1| exonuclease sbcCD subunit C [Deinococcus deserti VCD115] gi|226318589|gb|ACO46585.1| putative Exonuclease sbcCD, subunit C [Deinococcus deserti VCD115] Length = 911 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++ F F + ++F D L + G G GKSSL +A+ + YG+T+R Sbjct: 6 LDLQGFTAFRQYTTLDFTDLELFALVGPTGSGKSSLLDAMTFALYGHTER 55 >gi|218777973|ref|YP_002429291.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759357|gb|ACL01823.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] Length = 429 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 E +F+GF E +I+ LT++ G NG GKS+L E +E L + Sbjct: 3 EFHNFKGFKE-ARIDLFKPLTVLIGPNGSGKSNLIEGVELLSF 44 >gi|331269657|ref|YP_004396149.1| chromosome segregation protein SMC [Clostridium botulinum BKT015925] gi|329126207|gb|AEB76152.1| chromosome segregation protein SMC [Clostridium botulinum BKT015925] Length = 1184 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ Sbjct: 3 LKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVL 48 >gi|254774305|ref|ZP_05215821.1| hypothetical protein MaviaA2_06510 [Mycobacterium avium subsp. avium ATCC 25291] Length = 876 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG ++IEF DH + +V G N GKSS+ EA++ L Sbjct: 2 KLHRLTLTNYRGIAH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|300707231|ref|XP_002995833.1| hypothetical protein NCER_101178 [Nosema ceranae BRL01] gi|239605055|gb|EEQ82162.1| hypothetical protein NCER_101178 [Nosema ceranae BRL01] Length = 972 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 24/39 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IEI +F+ F I+ + TI+ G+NG GKS++ AI Sbjct: 6 IEIENFKSFKSFTSIDLSPKFTIIIGKNGSGKSNIIHAI 44 >gi|118465536|ref|YP_880670.1| hypothetical protein MAV_1428 [Mycobacterium avium 104] gi|118166823|gb|ABK67720.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 876 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG ++IEF DH + +V G N GKSS+ EA++ L Sbjct: 2 KLHRLTLTNYRGIAH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|41408591|ref|NP_961427.1| hypothetical protein MAP2493c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396949|gb|AAS04810.1| hypothetical protein MAP_2493c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 876 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG ++IEF DH + +V G N GKSS+ EA++ L Sbjct: 2 KLHRLTLTNYRGIAH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|255021567|ref|ZP_05293610.1| Chromosome partition protein smc [Acidithiobacillus caldus ATCC 51756] gi|254968955|gb|EET26474.1| Chromosome partition protein smc [Acidithiobacillus caldus ATCC 51756] Length = 1154 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L I + F+ F E +I + ++ G NG GKS++ +AI W+ + R+ G Sbjct: 2 RLSAIRLHGFKSFRERTQIRLEANPVVIVGPNGCGKSNIVDAIRWVLGESSARQLRG 58 >gi|194014505|ref|ZP_03053122.1| chromosome segregation protein SMC [Bacillus pumilus ATCC 7061] gi|194013531|gb|EDW23096.1| chromosome segregation protein SMC [Bacillus pumilus ATCC 7061] Length = 1186 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + ++F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFAQRVTVDFVKGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|171914180|ref|ZP_02929650.1| Chromosome segregation protein SMC [Verrucomicrobium spinosum DSM 4136] Length = 1328 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + EF +T + G NG GKS++ +AI W+ Sbjct: 3 LKSLEIHGFKSFADKTLFEFHTGVTGIVGPNGCGKSNVVDAIRWVL 48 >gi|157692274|ref|YP_001486736.1| chromosome segregation protein Smc [Bacillus pumilus SAFR-032] gi|157681032|gb|ABV62176.1| chromosome segregation protein Smc [Bacillus pumilus SAFR-032] Length = 1186 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++ F+ F + ++F +T V G NG GKS++++AI W+ Sbjct: 6 LDVIGFKSFAQRVTVDFVKGVTAVVGPNGSGKSNITDAIRWVL 48 >gi|118442990|ref|YP_878289.1| chromosome segregation protein SMC [Clostridium novyi NT] gi|118133446|gb|ABK60490.1| chromosome segregation protein SMC [Clostridium novyi NT] Length = 1185 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ Sbjct: 3 LKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVL 48 >gi|194336900|ref|YP_002018694.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309377|gb|ACF44077.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 422 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ + + +FRG E+ + F LT++ NG GK+++ +A+ L T R K DS Sbjct: 2 KIRTVTLKNFRGIEELC-LPFDAGLTVIAAVNGGGKTTVVDALAMLLSWLTARTKR-DSG 59 Query: 88 KKRSIK 93 K R IK Sbjct: 60 KGRYIK 65 >gi|124002756|ref|ZP_01687608.1| chromosome segregation protein SMC [Microscilla marina ATCC 23134] gi|123991984|gb|EAY31371.1| chromosome segregation protein SMC [Microscilla marina ATCC 23134] Length = 1200 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + I+F +T + G NG GKS++ +AI W+ Sbjct: 3 LKKLEIKGFKSFGDKVHIDFTTGVTGIVGPNGCGKSNVVDAIRWVL 48 >gi|167648328|ref|YP_001685991.1| chromosome segregation protein SMC [Caulobacter sp. K31] gi|167350758|gb|ABZ73493.1| chromosome segregation protein SMC [Caulobacter sp. K31] Length = 1153 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E + LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLSGFKSFVEPTEFRIEPGLTGVVGPNGCGKSNLLEALRWV 47 >gi|160915313|ref|ZP_02077526.1| hypothetical protein EUBDOL_01322 [Eubacterium dolichum DSM 3991] gi|158433112|gb|EDP11401.1| hypothetical protein EUBDOL_01322 [Eubacterium dolichum DSM 3991] Length = 978 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 31/56 (55%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + I F + + G NG GKS++++AI W+ + + G+S+ Sbjct: 6 IELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGNSM 61 >gi|88810626|ref|ZP_01125883.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] gi|88792256|gb|EAR23366.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] Length = 1170 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E + + V G NG GKS++ +A+ W+ + R G+S+ Sbjct: 2 RLNKIKLAGFKSFVEPTTVSLPGSIVGVVGPNGCGKSNIIDAVRWVMGESSPRYLRGESM 61 >gi|120552948|ref|YP_957299.1| DNA replication and repair protein RecF [Marinobacter aquaeolei VT8] gi|166220714|sp|A1TWJ3|RECF_MARAV RecName: Full=DNA replication and repair protein recF gi|120322797|gb|ABM17112.1| DNA replication and repair protein RecF [Marinobacter aquaeolei VT8] Length = 373 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ ++ HFR +EF+ ++ G NG GK+S+ EAI +L G + R Sbjct: 3 LVKLQTQHFRNLLS-APVEFSPSFNLLYGANGSGKTSVLEAIGYLGLGRSFR 53 >gi|242373526|ref|ZP_04819100.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis M23864:W1] gi|242348889|gb|EES40491.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis M23864:W1] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|223043720|ref|ZP_03613763.1| chromosome segregation protein SMC [Staphylococcus capitis SK14] gi|222442817|gb|EEE48919.1| chromosome segregation protein SMC [Staphylococcus capitis SK14] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|57866685|ref|YP_188383.1| chromosome segregation SMC protein [Staphylococcus epidermidis RP62A] gi|242242517|ref|ZP_04796962.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis W23144] gi|57637343|gb|AAW54131.1| chromosome segregation SMC protein, putative [Staphylococcus epidermidis RP62A] gi|242234025|gb|EES36337.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis W23144] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|114566314|ref|YP_753468.1| chromosome segregation SMC protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337249|gb|ABI68097.1| condensin subunit Smc [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 1191 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++I F+ F + +++ L IV G NG GKS++ +AI W+ + R+ G Sbjct: 6 LDIKGFKSFADNTELQLNPGLNIVVGPNGCGKSNIVDAIRWVLGETSIRQLRG 58 >gi|332799247|ref|YP_004460746.1| SMC domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696982|gb|AEE91439.1| SMC domain protein [Tepidanaerobacter sp. Re1] Length = 480 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++ +F+ E Q I+F + LT++ GQ GKS++ A++W+ Y Sbjct: 7 LKLKNFQSHKESQ-IDFDEGLTVILGQTDQGKSAIIRALKWVLYN 50 >gi|319401474|gb|EFV89684.1| chromosome segregation protein SMC [Staphylococcus epidermidis FRI909] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|309811297|ref|ZP_07705084.1| DNA replication and repair protein RecF [Dermacoccus sp. Ellin185] gi|308434604|gb|EFP58449.1| DNA replication and repair protein RecF [Dermacoccus sp. Ellin185] Length = 440 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L + + FR +TE + +E AD +T G NG GK++L EA +L Sbjct: 2 RLRHLSLRDFRSYTEAE-VELADGVTTFVGLNGQGKTNLVEAAGYL 46 >gi|293366801|ref|ZP_06613477.1| SMC family domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319102|gb|EFE59472.1| SMC family domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329736623|gb|EGG72889.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU045] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|311744092|ref|ZP_07717898.1| SMC structural maintenance of chromosomes partitioning protein [Aeromicrobium marinum DSM 15272] gi|311313222|gb|EFQ83133.1| SMC structural maintenance of chromosomes partitioning protein [Aeromicrobium marinum DSM 15272] Length = 1185 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + F+ F +EF +T V G NG GKS++ +A+ W+ Sbjct: 3 LKSLTLRGFKSFASTTTLEFETGITCVVGPNGSGKSNVVDALSWV 47 >gi|285019397|ref|YP_003377108.1| hypothetical protein XALc_2636 [Xanthomonas albilineans GPE PC73] gi|283474615|emb|CBA17114.1| hypothetical protein XALc_2636 [Xanthomonas albilineans] Length = 616 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL + + +FRG+++ +IE D LT G+N GKS++ EA++ F Sbjct: 2 KLSAVILENFRGYSQRTRIEI-DDLTAFIGKNDAGKSTILEALDIFF 47 >gi|225164963|ref|ZP_03727174.1| chromosome segregation protein SMC [Opitutaceae bacterium TAV2] gi|224800421|gb|EEG18806.1| chromosome segregation protein SMC [Opitutaceae bacterium TAV2] Length = 777 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK-- 89 +++ F+ F + + F +T + G NG GKS++++AI W+ + + G ++ Sbjct: 6 LKLHGFKSFADQSTLRFEPGVTAIVGPNGCGKSNVADAIRWVLGEQSAKALRGGKMQDVI 65 Query: 90 ---RSIKTPMPMC---MAVPRCKYQL 109 + P MC + + C+ QL Sbjct: 66 FEGADTRKPAQMCEVSLILTDCEKQL 91 >gi|183984113|ref|YP_001852404.1| hydrolase [Mycobacterium marinum M] gi|183177439|gb|ACC42549.1| conserved hydrolase [Mycobacterium marinum M] Length = 876 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG ++IEF DH + +V G N GKSS+ EA++ L + D Sbjct: 2 KLHRLVLTNYRGIAH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL-------EFKDR 53 Query: 87 IKKRSIKTPMP 97 K+ IK P Sbjct: 54 SAKKEIKQVKP 64 >gi|149183217|ref|ZP_01861663.1| Smc [Bacillus sp. SG-1] gi|148849082|gb|EDL63286.1| Smc [Bacillus sp. SG-1] Length = 1189 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +++ F+ F E ++F +T V G NG GKS++ +AI W+ Sbjct: 3 LKQLDVIGFKSFAERISVDFVPGVTAVVGPNGSGKSNIIDAIRWVL 48 >gi|118619205|ref|YP_907537.1| hydrolase [Mycobacterium ulcerans Agy99] gi|118571315|gb|ABL06066.1| conserved hydrolase [Mycobacterium ulcerans Agy99] Length = 876 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG ++IEF DH + +V G N GKSS+ EA++ L + D Sbjct: 2 KLHRLVLTNYRGIAH-REIEFPDHGVVVVCGANEIGKSSMIEALDLLL-------EFKDR 53 Query: 87 IKKRSIKTPMP 97 K+ IK P Sbjct: 54 SAKKEIKQVKP 64 >gi|319746166|gb|EFV98437.1| recombination protein F [Streptococcus agalactiae ATCC 13813] Length = 355 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +I + H+R + E Q ++F+ +L I G+N GK++ EAI +L + R + Sbjct: 5 NISLKHYRNYEEAQ-VDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTR 55 >gi|94984930|ref|YP_604294.1| SMC protein-like protein [Deinococcus geothermalis DSM 11300] gi|94555211|gb|ABF45125.1| SbcC, ATPase involved in DNA repair [Deinococcus geothermalis DSM 11300] Length = 910 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+ F F + ++F+D L + G G GKSSL +A+ + YG T R Sbjct: 4 LSLELQGFTAFRQHTTLDFSDLELFALVGPTGSGKSSLLDAMTFALYGTTPR 55 >gi|22538290|ref|NP_689141.1| recombination protein F [Streptococcus agalactiae 2603V/R] gi|25012150|ref|NP_736545.1| recombination protein F [Streptococcus agalactiae NEM316] gi|77413654|ref|ZP_00789839.1| DNA replication and repair protein RecF [Streptococcus agalactiae 515] gi|51316463|sp|Q8DWQ8|RECF_STRA5 RecName: Full=DNA replication and repair protein recF gi|51316464|sp|Q8E2K7|RECF_STRA3 RecName: Full=DNA replication and repair protein recF gi|22535205|gb|AAN01014.1|AE014289_14 recF protein [Streptococcus agalactiae 2603V/R] gi|24413694|emb|CAD47774.1| Unknown [Streptococcus agalactiae NEM316] gi|77160309|gb|EAO71435.1| DNA replication and repair protein RecF [Streptococcus agalactiae 515] Length = 369 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +I + H+R + E Q ++F+ +L I G+N GK++ EAI +L + R + Sbjct: 5 NISLKHYRNYEEAQ-VDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTR 55 >gi|295094865|emb|CBK83956.1| RecF/RecN/SMC N terminal domain. [Coprococcus sp. ART55/1] Length = 220 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVL 48 >gi|126436524|ref|YP_001072215.1| hypothetical protein Mjls_3949 [Mycobacterium sp. JLS] gi|126236324|gb|ABN99724.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length = 877 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + ++IEF D + +++G N GKSS+ EA++ LF Sbjct: 2 KLHRLVLTNYRGISR-REIEFPDRGVVVISGANEIGKSSMIEALDLLF 48 >gi|108800898|ref|YP_641095.1| hypothetical protein Mmcs_3934 [Mycobacterium sp. MCS] gi|119870038|ref|YP_939990.1| hypothetical protein Mkms_4008 [Mycobacterium sp. KMS] gi|108771317|gb|ABG10039.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696127|gb|ABL93200.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length = 877 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + ++IEF D + +++G N GKSS+ EA++ LF Sbjct: 2 KLHRLVLTNYRGISR-REIEFPDRGVVVISGANEIGKSSMIEALDLLF 48 >gi|292655017|ref|YP_003534914.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii DS2] gi|49036440|sp|P62133|RAD50_HALVO RecName: Full=DNA double-strand break repair rad50 ATPase gi|46309119|emb|CAG25775.1| DNA double-strand break repair Rad50 ATPase [Haloferax volcanii] gi|291371675|gb|ADE03902.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii DS2] Length = 893 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I I +F+ + E +++ D +T+++G NG GKSSL EA + YG Sbjct: 6 IAIRNFKPY-EDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYG 49 >gi|77407728|ref|ZP_00784483.1| DNA replication and repair protein RecF [Streptococcus agalactiae COH1] gi|77173727|gb|EAO76841.1| DNA replication and repair protein RecF [Streptococcus agalactiae COH1] Length = 369 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +I + H+R + E Q ++F+ +L I G+N GK++ EAI +L + R + Sbjct: 5 NISLKHYRNYEEAQ-VDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTR 55 >gi|76787191|ref|YP_330704.1| recombination protein F [Streptococcus agalactiae A909] gi|77406514|ref|ZP_00783567.1| DNA replication and repair protein RecF [Streptococcus agalactiae H36B] gi|77411774|ref|ZP_00788110.1| DNA replication and repair protein RecF [Streptococcus agalactiae CJB111] gi|97180994|sp|Q3JYE9|RECF_STRA1 RecName: Full=DNA replication and repair protein recF gi|76562248|gb|ABA44832.1| DNA replication and repair protein RecF [Streptococcus agalactiae A909] gi|77162165|gb|EAO73140.1| DNA replication and repair protein RecF [Streptococcus agalactiae CJB111] gi|77174886|gb|EAO77702.1| DNA replication and repair protein RecF [Streptococcus agalactiae H36B] Length = 369 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +I + H+R + E Q ++F+ +L I G+N GK++ EAI +L + R + Sbjct: 5 NISLKHYRNYEEAQ-VDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTR 55 >gi|314933412|ref|ZP_07840777.1| cell division protein Smc [Staphylococcus caprae C87] gi|313653562|gb|EFS17319.1| cell division protein Smc [Staphylococcus caprae C87] Length = 1189 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|255524261|ref|ZP_05391220.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|296185383|ref|ZP_06853793.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|255512086|gb|EET88367.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|296050217|gb|EFG89641.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] Length = 1188 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F + + + G NG GKS++S+A+ W+ Sbjct: 3 LKSMEIRGFKSFADKTELVFKNGIMGIVGPNGSGKSNISDAVRWVL 48 >gi|167767258|ref|ZP_02439311.1| hypothetical protein CLOSS21_01777 [Clostridium sp. SS2/1] gi|167711233|gb|EDS21812.1| hypothetical protein CLOSS21_01777 [Clostridium sp. SS2/1] gi|291559431|emb|CBL38231.1| hypothetical protein CL2_12570 [butyrate-producing bacterium SSC/2] Length = 517 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++I +FRG+ + +I+ D LT++ G+N GKS++ EA++ F Sbjct: 2 KIDSMKIKNFRGYKDETEIKLND-LTVLVGKNDIGKSTILEALDIFF 47 >gi|160892685|ref|ZP_02073475.1| hypothetical protein CLOL250_00215 [Clostridium sp. L2-50] gi|156865726|gb|EDO59157.1| hypothetical protein CLOL250_00215 [Clostridium sp. L2-50] Length = 1185 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVL 48 >gi|27467827|ref|NP_764464.1| chromosome segregation SMC protein [Staphylococcus epidermidis ATCC 12228] gi|251810664|ref|ZP_04825137.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis BCM-HMP0060] gi|282876334|ref|ZP_06285201.1| chromosome segregation protein SMC [Staphylococcus epidermidis SK135] gi|27315372|gb|AAO04506.1|AE016747_3 chromosome segregation SMC protein [Staphylococcus epidermidis ATCC 12228] gi|251805824|gb|EES58481.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295359|gb|EFA87886.1| chromosome segregation protein SMC [Staphylococcus epidermidis SK135] gi|329736298|gb|EGG72570.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU028] Length = 1189 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|329724312|gb|EGG60824.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU144] Length = 1189 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|21674524|ref|NP_662589.1| Smc family protein [Chlorobium tepidum TLS] gi|21647717|gb|AAM72931.1| SMC family protein [Chlorobium tepidum TLS] Length = 1183 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIELFGFKSFAHRVRIHFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|310780414|ref|YP_003968746.1| SMC domain protein [Ilyobacter polytropus DSM 2926] gi|309749737|gb|ADO84398.1| SMC domain protein [Ilyobacter polytropus DSM 2926] Length = 605 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +FRG+ +I+ I + ++ G+N GKS++ EA+E F + + GD Sbjct: 2 KLKKIILKNFRGYKDIE-IPIEKNFNVIVGKNDVGKSTIMEAMEIFFNSNSIKADLGD 58 >gi|193212154|ref|YP_001998107.1| chromosome segregation protein SMC [Chlorobaculum parvum NCIB 8327] gi|193085631|gb|ACF10907.1| chromosome segregation protein SMC [Chlorobaculum parvum NCIB 8327] Length = 1183 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIELFGFKSFAHRVRIHFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|254976971|ref|ZP_05273443.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-66c26] gi|255651889|ref|ZP_05398791.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-37x79] gi|260687153|ref|YP_003218287.1| putative conjugative transposon DNA recombination protein [Clostridium difficile R20291] gi|306520352|ref|ZP_07406699.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-32g58] gi|260213170|emb|CBE04624.1| putative conjugative transposon DNA recombination protein [Clostridium difficile R20291] Length = 540 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F+ F++ ++F + + I+ G NG GKS++ EAI + G HG +I+ Sbjct: 6 LKIKNFKCFSDWFIVDFENGINILVGNNGTGKSTILEAINLVLTG----TYHGKNIR 58 >gi|86610145|ref|YP_478907.1| recombination protein F [Synechococcus sp. JA-2-3B'a(2-13)] gi|97181049|sp|Q2JIB8|RECF_SYNJB RecName: Full=DNA replication and repair protein recF gi|86558687|gb|ABD03644.1| DNA replication and repair protein RecF [Synechococcus sp. JA-2-3B'a(2-13)] Length = 380 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + HFR + + Q+I F TI+ G+N GK++L EA+E L Sbjct: 3 LRSLHLRHFRNYRD-QEITFDAPKTILVGENAQGKTNLLEAVELL 46 >gi|187932800|ref|YP_001886968.1| hypothetical protein CLL_A2780 [Clostridium botulinum B str. Eklund 17B] gi|187720953|gb|ACD22174.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund 17B] Length = 656 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL +E+ +F+G ++ + F TI+ G+NG GKS++ + WL +G Sbjct: 1 MIKLKKLELKNFKGIKDL-TVTFGTVTTIL-GENGTGKSTIFDGFNWLLFG 49 >gi|163814045|ref|ZP_02205437.1| hypothetical protein COPEUT_00198 [Coprococcus eutactus ATCC 27759] gi|158450494|gb|EDP27489.1| hypothetical protein COPEUT_00198 [Coprococcus eutactus ATCC 27759] Length = 1185 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVL 48 >gi|124268178|ref|YP_001022182.1| ATP-dependent OLD family endonuclease [Methylibium petroleiphilum PM1] gi|124260953|gb|ABM95947.1| ATP-dependent endonuclease of the OLD family-like protein [Methylibium petroleiphilum PM1] Length = 608 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E ++ D LT G+N GKSS+ EA+E F + + GD+ Sbjct: 2 RLKSVAIKNFRCYREEATVQL-DELTTFVGKNDIGKSSVLEALEIFFNNDVVKIEAGDA 59 >gi|70726681|ref|YP_253595.1| chromosome segregation SMC protein [Staphylococcus haemolyticus JCSC1435] gi|68447405|dbj|BAE04989.1| chromosome segregation SMC protein [Staphylococcus haemolyticus JCSC1435] Length = 1189 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDAIGFKSFADHTDVQFDKGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|332284992|ref|YP_004416903.1| putative chromosome partition protein [Pusillimonas sp. T7-7] gi|330428945|gb|AEC20279.1| putative chromosome partition protein [Pusillimonas sp. T7-7] Length = 1174 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E I L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTQIKLAGFKSFVEPTVIPTPSQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|326381660|ref|ZP_08203354.1| hypothetical protein SCNU_01895 [Gordonia neofelifaecis NRRL B-59395] gi|326199907|gb|EGD57087.1| hypothetical protein SCNU_01895 [Gordonia neofelifaecis NRRL B-59395] Length = 794 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 32 IEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I + FRG + + +T+V+G+NG GKSS +EA+E+ G + R Sbjct: 47 IAVEGFRGIGARATLNVSPRPGITVVSGRNGSGKSSFAEALEFAITGKSYR 97 >gi|322436028|ref|YP_004218240.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX9] gi|321163755|gb|ADW69460.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX9] Length = 1321 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLF 74 + KL ++I F+ F + +++ A + + + G NG GKS++S+AI W+ Sbjct: 1 MLKLKKVQILGFKSFCDRTEVQLAGEGIAAIVGPNGCGKSNISDAITWVL 50 >gi|284161167|ref|YP_003399790.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] gi|284011164|gb|ADB57117.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] Length = 1135 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I++ +F+ F + + IEF D+ T++ G NG GKS++ ++I + F Sbjct: 6 IKLRNFKSFKKAE-IEFRDNFTVITGPNGSGKSNIIDSILFCF 47 >gi|257452570|ref|ZP_05617869.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] gi|317059110|ref|ZP_07923595.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] gi|313684786|gb|EFS21621.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] Length = 1172 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E IEF +T + G NG GKS++ +A+ W+ Sbjct: 6 VEVHGFKSFGEKVYIEFNQGITSIVGPNGSGKSNILDAVLWVL 48 >gi|89900983|ref|YP_523454.1| chromosome segregation protein SMC [Rhodoferax ferrireducens T118] gi|89345720|gb|ABD69923.1| Chromosome segregation protein SMC [Rhodoferax ferrireducens T118] Length = 1171 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|326422574|gb|EGD71969.1| hypothetical protein CSMARM5_0116 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 796 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +I + + R + I KI+F++ + I+ G G GKSS+ ++E+ +G Sbjct: 3 LSEINLENIRSHS-ITKIKFSEGINIITGNTGSGKSSILMSVEYALFG 49 >gi|330004289|ref|ZP_08304847.1| putative DNA sulfur modification protein DndD [Klebsiella sp. MS 92-3] gi|328536661|gb|EGF62983.1| putative DNA sulfur modification protein DndD [Klebsiella sp. MS 92-3] Length = 638 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 RG IQ I AD NG GKS+L A+ W YG T GD + Sbjct: 24 RGLVLIQGINAADSSA---ASNGAGKSTLMNALMWCLYGETATGYKGDDV 70 >gi|300173118|ref|YP_003772284.1| hypothetical protein LEGAS_0817 [Leuconostoc gasicomitatum LMG 18811] gi|299887497|emb|CBL91465.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG 18811] Length = 788 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I+IS F +++ +K +F + L +V GQN GKS+L I + +G+ ++ Sbjct: 2 KIKQIDISGFGRWSQ-KKFDFVNDLQVVAGQNESGKSTLRAFIVGILFGFPSKK 54 >gi|294782919|ref|ZP_06748245.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 1_1_41FAA] gi|294481560|gb|EFG29335.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 1_1_41FAA] Length = 1183 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ Sbjct: 6 VEINGFKSFGEKVYIDFNRGITSIVGPNGSGKSNILDAVLWVL 48 >gi|255326581|ref|ZP_05367658.1| chromosome segregation protein SMC [Rothia mucilaginosa ATCC 25296] gi|255296321|gb|EET75661.1| chromosome segregation protein SMC [Rothia mucilaginosa ATCC 25296] Length = 1102 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + + F+ F EF + V G NG GKS++ +A+ W+ + G S+K Sbjct: 3 LMSLTLRGFKSFASATTFEFTPGINAVVGPNGSGKSNVLDALAWVMGEQGAKSLRGGSMK 62 >gi|228475081|ref|ZP_04059809.1| chromosome segregation protein SMC [Staphylococcus hominis SK119] gi|228271066|gb|EEK12454.1| chromosome segregation protein SMC [Staphylococcus hominis SK119] Length = 1189 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+ F+ F + ++F +T + G NG GKS++++AI+W+ Sbjct: 4 LKSIDTIGFKSFADRTNVQFDRGVTAIVGPNGSGKSNITDAIKWVL 49 >gi|311741697|ref|ZP_07715519.1| recombination protein F [Corynebacterium pseudogenitalium ATCC 33035] gi|311303218|gb|EFQ79299.1| recombination protein F [Corynebacterium pseudogenitalium ATCC 33035] Length = 391 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 D+++ FR + E+ ++ +T+ G+NG+GK+++ EAI + + + R H Sbjct: 5 DLDVRDFRSWPELN-VQLGPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVSH 56 >gi|196228820|ref|ZP_03127686.1| DNA replication and repair protein RecF [Chthoniobacter flavus Ellin428] gi|196227101|gb|EDY21605.1| DNA replication and repair protein RecF [Chthoniobacter flavus Ellin428] Length = 352 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 L +++ HFR F + +++EFA L + G N +GK+SL EA Sbjct: 13 LRGLKVRHFRCF-DAREVEFAPGLNFIVGPNAHGKTSLLEA 52 >gi|152979902|ref|YP_001353757.1| chromosome segregation protein [Janthinobacterium sp. Marseille] gi|151279979|gb|ABR88389.1| chromosome segregation protein [Janthinobacterium sp. Marseille] Length = 1175 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSIKLSGFKSFVDPTNFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|148557587|ref|YP_001265169.1| chromosome segregation protein SMC [Sphingomonas wittichii RW1] gi|148502777|gb|ABQ71031.1| chromosome segregation protein SMC [Sphingomonas wittichii RW1] Length = 1140 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E ++ LT + G NG GKS+L EAI W+ Sbjct: 6 LRLSGFKSFVEPAELIIERGLTGIVGPNGCGKSNLLEAIRWV 47 >gi|257466429|ref|ZP_05630740.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] gi|315917585|ref|ZP_07913825.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] gi|313691460|gb|EFS28295.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] Length = 1172 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E+ F+ F E IEF +T + G NG GKS++ +A+ W+ Sbjct: 6 VEVHGFKSFGEKVYIEFNQGITSIVGPNGSGKSNILDAVLWVL 48 >gi|169335335|ref|ZP_02862528.1| hypothetical protein ANASTE_01747 [Anaerofustis stercorihominis DSM 17244] gi|169258073|gb|EDS72039.1| hypothetical protein ANASTE_01747 [Anaerofustis stercorihominis DSM 17244] Length = 1192 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + +I F + +T + G NG GKS++ +AI W+ Sbjct: 3 LKKVEIYGFKSFGQKVEIIFDNKVTGIVGPNGSGKSNIVDAIRWVL 48 >gi|108757313|ref|YP_633058.1| chromosome segregation protein SMC [Myxococcus xanthus DK 1622] gi|108461193|gb|ABF86378.1| chromosome segregation protein SMC [Myxococcus xanthus DK 1622] Length = 1200 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG----DSI 87 ++I+ F+ F E F + +T + G NG GKS++ +AI W+ + + G D I Sbjct: 6 LDITGFKSFMERSVFTFDEGVTGIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGRGMEDVI 65 Query: 88 KKRSIKTPMPMCMA 101 S P P+ MA Sbjct: 66 FNGSENKP-PLSMA 78 >gi|145220266|ref|YP_001130975.1| chromosome segregation protein SMC [Prosthecochloris vibrioformis DSM 265] gi|145206430|gb|ABP37473.1| chromosome segregation protein SMC [Chlorobium phaeovibrioides DSM 265] Length = 1178 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIELFGFKSFANRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|217966464|ref|YP_002351970.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] gi|217335563|gb|ACK41356.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] Length = 340 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 I + +FR F++ K F D + ++ G NG GK+S+ EA+ +L Sbjct: 11 IYLRNFRNFSDF-KTNFKDGINVIYGPNGSGKTSILEAVAYL 51 >gi|91202091|emb|CAJ75151.1| hypothetical protein kuste4389 [Candidatus Kuenenia stuttgartiensis] Length = 574 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW-LFYGYTQRR 81 KL++I+I +FRG + D LT++ G+N GKS++ EAI L G+ RR Sbjct: 2 KLIEIKIENFRGVRSLHLP--LDGLTVLIGENNTGKSTVLEAIRLVLTRGFGVRR 54 >gi|82701778|ref|YP_411344.1| chromosome segregation protein SMC [Nitrosospira multiformis ATCC 25196] gi|82409843|gb|ABB73952.1| condensin subunit Smc [Nitrosospira multiformis ATCC 25196] Length = 1190 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I+++ F+ F + +I F L V G NG GKS++ +A+ W+ Sbjct: 2 RLSHIKLAGFKSFVDPTEIPFPGDLVGVVGPNGCGKSNVIDAVRWVL 48 >gi|257437731|ref|ZP_05613486.1| DNA replication and repair protein RecF [Faecalibacterium prausnitzii A2-165] gi|257200038|gb|EEU98322.1| DNA replication and repair protein RecF [Faecalibacterium prausnitzii A2-165] Length = 373 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E++++R + LT++ G NG GK++L EAI WL G R D+ Sbjct: 2 RLLSLEVTNYRNIAS-ASLTPGRELTVICGNNGQGKTNLLEAI-WLLTGGKSFRGGKDA 58 >gi|262067036|ref|ZP_06026648.1| putative RecF/RecN/SMC N domain protein [Fusobacterium periodonticum ATCC 33693] gi|291379245|gb|EFE86763.1| putative RecF/RecN/SMC N domain protein [Fusobacterium periodonticum ATCC 33693] Length = 1183 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ Sbjct: 6 VEINGFKSFGEKVYIDFNRGITSIVGPNGSGKSNILDAVLWVL 48 >gi|193222296|emb|CAL61499.2| Chromosome segregation protein SMC [Herminiimonas arsenicoxydans] Length = 1175 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F + + L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSIKLSGFKSFVDPTNFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|162450015|ref|YP_001612382.1| hypothetical protein sce1744 [Sorangium cellulosum 'So ce 56'] gi|161160597|emb|CAN91902.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 1201 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EIS F+ F + + F + + G NG GKS++ +AI W + + G S+ Sbjct: 2 RIRKLEISGFKSFVDRTVVHFDTDVVGIVGPNGCGKSNIVDAIRWAIGEQSAKHLRGKSM 61 >gi|15806921|ref|NP_295645.1| exonuclease SbcC [Deinococcus radiodurans R1] gi|17433256|sp|Q9RT44|SBCC_DEIRA RecName: Full=Nuclease sbcCD subunit C gi|6459706|gb|AAF11474.1|AE002031_3 exonuclease SbcC [Deinococcus radiodurans R1] Length = 909 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K L + + F F + ++FAD L + G G GKSSL +A+ + YG T R Sbjct: 2 KPLHLTLRGFTAFRQTTDLDFADLELFALVGPTGSGKSSLLDAMTFALYGETAR 55 >gi|296394247|ref|YP_003659131.1| chromosome segregation protein SMC [Segniliparus rotundus DSM 44985] gi|296181394|gb|ADG98300.1| chromosome segregation protein SMC [Segniliparus rotundus DSM 44985] Length = 1171 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + F+ F + F +T V GQNG GKS++++A+ W+ Sbjct: 3 LRSLTLKGFKSFAAPTTLVFEPGVTAVVGQNGSGKSNIADALSWV 47 >gi|15964684|ref|NP_385037.1| putative chromosome partition protein [Sinorhizobium meliloti 1021] gi|15073862|emb|CAC45503.1| Putative chromosome partition protein [Sinorhizobium meliloti 1021] Length = 1156 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 26/49 (53%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L+ K + + F+ F E + LT V G NG GKS+L EA+ W+ Sbjct: 2 LLMKFTRLRLLGFKSFVEPTEFVIERGLTGVVGPNGCGKSNLVEALRWV 50 >gi|88860614|ref|ZP_01135251.1| gap repair protein with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] gi|88817209|gb|EAR27027.1| gap repair protein with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] Length = 364 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 14/86 (16%) Query: 30 LDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR------- 80 + +E+ + F + + F+ D + I+ G+NG GK+SL EAI +L +G + R Sbjct: 1 MSLELVTVKNFRNLADLSFSPVDGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTIKYKTI 60 Query: 81 -RKHGDSI----KKRSIKTPMPMCMA 101 + H D+ KKR + +P+ ++ Sbjct: 61 IQHHQDTFVIHAKKRIDQLLLPVGIS 86 >gi|156139595|gb|ABU51098.1| unknown [uncultured bacterium Bio5] Length = 409 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 + +L I I F+ F + ++ H +T + G NG GKS++S+AI W+ Sbjct: 27 LLELKRIHILGFKSFCDRTEVSLDTHGVTAIVGPNGCGKSNISDAISWVL 76 >gi|166366434|ref|YP_001658707.1| hypothetical protein MAE_36930 [Microcystis aeruginosa NIES-843] gi|166088807|dbj|BAG03515.1| hypothetical protein MAE_36930 [Microcystis aeruginosa NIES-843] Length = 690 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 28 KLLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KLL I++ +FR F EI + + T++ G NG GK+++ A W+ Y Sbjct: 2 KLLSIKLCNFRQFYGKTPEIHLAASSRNTTVIYGNNGAGKTTILNACTWVLY 53 >gi|145222844|ref|YP_001133522.1| hypothetical protein Mflv_2256 [Mycobacterium gilvum PYR-GCK] gi|315443311|ref|YP_004076190.1| hypothetical protein Mspyr1_16890 [Mycobacterium sp. Spyr1] gi|145215330|gb|ABP44734.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261614|gb|ADT98355.1| hypothetical protein Mspyr1_16890 [Mycobacterium sp. Spyr1] Length = 883 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG T + IEF D + +V+G N GKSS+ EA++ L + D Sbjct: 2 KLHRLVLTNYRGITH-RDIEFPDRGVVVVSGANEVGKSSMLEALDLLL-------ESKDR 53 Query: 87 IKKRSIKTPMP 97 K+ IK P Sbjct: 54 SNKKEIKQVKP 64 >gi|326577597|gb|EGE27474.1| hypothetical protein EA1_02387 [Moraxella catarrhalis O35E] Length = 458 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGAT 52 >gi|326571533|gb|EGE21548.1| hypothetical protein E9S_02899 [Moraxella catarrhalis BC7] Length = 458 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGAT 52 >gi|296112707|ref|YP_003626645.1| hypothetical protein MCR_0480 [Moraxella catarrhalis RH4] gi|295920401|gb|ADG60752.1| hypothetical protein MCR_0480 [Moraxella catarrhalis RH4] Length = 458 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGAT 52 >gi|167949865|ref|ZP_02536939.1| Chromosome segregation protein SMC [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 121 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 15/61 (24%), Positives = 33/61 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + +L + G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLEKIKLAGFKSFVDPTTVPMPSNLVGIVGPNGCGKSNVIDAVRWVMGESSAKMLRGES 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|167749505|ref|ZP_02421632.1| hypothetical protein EUBSIR_00461 [Eubacterium siraeum DSM 15702] gi|167657533|gb|EDS01663.1| hypothetical protein EUBSIR_00461 [Eubacterium siraeum DSM 15702] Length = 420 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI + + +Q + L I+ G+N GK+S+ +AI W G R K ++ Sbjct: 4 KISSLEIENVKRVKAVQLTPAENGLMIIGGKNNQGKTSVLDAIAWALGG--DRLKPSQAV 61 Query: 88 KKRSIKTP 95 ++ S+ P Sbjct: 62 REGSVIPP 69 >gi|323496668|ref|ZP_08101719.1| RecF/RecN/SMC family protein [Vibrio sinaloensis DSM 21326] gi|323318250|gb|EGA71210.1| RecF/RecN/SMC family protein [Vibrio sinaloensis DSM 21326] Length = 542 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + +S+FR F ++ ++F + LT++ G NG GK+S ++A+ +F Sbjct: 63 LRLNSLSLSNFRRFDDLC-LDFDEKLTVIIGDNGAGKTSFADAMANIF 109 >gi|291531541|emb|CBK97126.1| hypothetical protein EUS_21080 [Eubacterium siraeum 70/3] Length = 420 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI + + +Q + L I+ G+N GK+S+ +AI W G R K ++ Sbjct: 4 KISSLEIENVKRVKAVQLTPAENGLMIIGGKNNQGKTSVLDAIAWALGG--DRLKPSQAV 61 Query: 88 KKRSIKTP 95 ++ S+ P Sbjct: 62 REGSVIPP 69 >gi|78188397|ref|YP_378735.1| chromosome segregation protein SMC [Chlorobium chlorochromatii CaD3] gi|78170596|gb|ABB27692.1| Chromosome segregation protein SMC [Chlorobium chlorochromatii CaD3] Length = 1190 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F + +I F LT + G NG GK+++ +A+ W+ Sbjct: 3 LAKIELLGFKSFAQKVRIRFDKGLTAIVGPNGCGKTNVVDAMRWVL 48 >gi|116628687|ref|YP_813859.1| recombination protein F [Lactobacillus gasseri ATCC 33323] gi|238853342|ref|ZP_04643722.1| DNA replication and repair protein RecF [Lactobacillus gasseri 202-4] gi|311111573|ref|ZP_07712970.1| DNA replication and repair protein RecF [Lactobacillus gasseri MV-22] gi|122274315|sp|Q047F1|RECF_LACGA RecName: Full=DNA replication and repair protein recF gi|116094269|gb|ABJ59421.1| DNA replication and repair protein RecF [Lactobacillus gasseri ATCC 33323] gi|238834030|gb|EEQ26287.1| DNA replication and repair protein RecF [Lactobacillus gasseri 202-4] gi|311066727|gb|EFQ47067.1| DNA replication and repair protein RecF [Lactobacillus gasseri MV-22] Length = 374 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + E+ FR F E+ K +F H+ I G N GK++L EAI +L + R Sbjct: 3 LANFELKDFRNFKEL-KTDFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHR 53 >gi|186682009|ref|YP_001865205.1| exonuclease SbcC [Nostoc punctiforme PCC 73102] gi|186464461|gb|ACC80262.1| exonuclease SbcC [Nostoc punctiforme PCC 73102] Length = 1008 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H ++G NG GKSSL EAI W +G ++ D I Sbjct: 25 HTACISGSNGAGKSSLLEAITWAIWGESRATAEDDVI 61 >gi|327474502|gb|EGF19907.1| recombination protein F [Streptococcus sanguinis SK408] Length = 75 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + K+ ++IS+FR FT E I+ D L I G+N GK+++ AI F + + Sbjct: 1 MIKISRLKISNFRSFTNEENTIDELDVLNIFAGRNNVGKTNVLRAINLFF----NPKSYN 56 Query: 85 DSIKKRSIK 93 SI + +IK Sbjct: 57 PSIDRNAIK 65 >gi|212639594|ref|YP_002316114.1| chromosome segregation ATPase [Anoxybacillus flavithermus WK1] gi|212561074|gb|ACJ34129.1| Chromosome segregation ATPase [Anoxybacillus flavithermus WK1] Length = 1186 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E F+ F + I+F +T + G NG GKS++++AI W+ Sbjct: 6 LEAIGFKSFADRISIDFVPGMTAIVGPNGSGKSNITDAIRWVL 48 >gi|169338111|ref|ZP_02863218.1| chromosome partition protein smc [Clostridium botulinum C str. Eklund] gi|169294129|gb|EDS76262.1| chromosome partition protein smc [Clostridium botulinum C str. Eklund] Length = 377 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ Sbjct: 3 LKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVL 48 >gi|66819565|ref|XP_643442.1| hypothetical protein DDB_G0275697 [Dictyostelium discoideum AX4] gi|19717677|gb|AAL96260.1|AF482962_1 ABC transporter AbcH.3 [Dictyostelium discoideum] gi|60471643|gb|EAL69599.1| hypothetical protein DDB_G0275697 [Dictyostelium discoideum AX4] Length = 1118 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--------GDS-IKKRSI 92 ++ + E + + ++ G+ G GKS++ EA+ W YG T +K GD I +S Sbjct: 476 DVDQQEMINRMIMIRGEMGSGKSTIFEALVWCLYGNTSPKKQSTSSSSIKGDEVINDQSK 535 Query: 93 KTPMPMCMAVPRCK 106 + + + + + CK Sbjct: 536 QASVKVELLIDDCK 549 >gi|319641270|ref|ZP_07995969.1| hypothetical protein HMPREF9011_01566 [Bacteroides sp. 3_1_40A] gi|317387143|gb|EFV68023.1| hypothetical protein HMPREF9011_01566 [Bacteroides sp. 3_1_40A] Length = 531 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I I +F+G E I F D + ++ G NG GKS+L EAI Sbjct: 5 IIIKNFKGIKE-ADISFHDKINVIVGNNGVGKSTLIEAI 42 >gi|158521730|ref|YP_001529600.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3] gi|158510556|gb|ABW67523.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3] Length = 1204 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +EI+ F+ F E I F + + G NG GKS++ +A++W+ + + G S+ Sbjct: 2 RLKRLEINGFKSFPEKATISFPPGIFSIVGPNGCGKSNIIDALKWVMGEQSAMQLRGKSM 61 >gi|91773464|ref|YP_566156.1| condensin subunit Smc [Methanococcoides burtonii DSM 6242] gi|91712479|gb|ABE52406.1| condensin subunit SMC [Methanococcoides burtonii DSM 6242] Length = 1174 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +IE +F+ F + KI F D T ++G NG GKS++ + I Sbjct: 5 EIEFINFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGI 44 >gi|325300494|ref|YP_004260411.1| SMC domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320047|gb|ADY37938.1| SMC domain protein [Bacteroides salanitronis DSM 18170] Length = 441 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ DI I +FRGFTE I F + +V G N GK++L A++ + Q Sbjct: 2 RIKDITIRNFRGFTERSFI-FDSRMNVVLGNNTTGKTTLLHAVQIALGAFLQ 52 >gi|302384637|ref|YP_003820459.1| hypothetical protein Closa_0193 [Clostridium saccharolyticum WM1] gi|302195265|gb|ADL02836.1| hypothetical protein Closa_0193 [Clostridium saccharolyticum WM1] Length = 878 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 34 ISHFRGFTE---IQKIEFADHLT-----IVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +FRG+ E ++ +HL I +G NG+GK+ EAIEW G + + D Sbjct: 8 IKNFRGYGENNTTDEMYLFEHLNDADFVIFSGYNGFGKTGFFEAIEWCITGKIKGLQETD 67 Query: 86 SIKKRSIK 93 K ++K Sbjct: 68 IYAKNTMK 75 >gi|302036230|ref|YP_003796552.1| putative chromosome segregation protein Smc [Candidatus Nitrospira defluvii] gi|300604294|emb|CBK40626.1| putative Chromosome segregation protein Smc [Candidatus Nitrospira defluvii] Length = 1227 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F E KI+F +T + G NG GKS++ ++I W+ Sbjct: 3 LKSLEMLGFKSFAE-AKIQFPKGITAIVGPNGSGKSNVVDSILWVL 47 >gi|193213727|ref|YP_001994926.1| chromosome segregation protein SMC [Chloroherpeton thalassium ATCC 35110] gi|193087204|gb|ACF12479.1| chromosome segregation protein SMC [Chloroherpeton thalassium ATCC 35110] Length = 1187 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + +++F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKLELFGFKSFAQRVQVKFDSGLTAIVGPNGCGKTNIVDAIRWVL 48 >gi|24374372|ref|NP_718415.1| exonuclease SbcC, putative [Shewanella oneidensis MR-1] gi|24348932|gb|AAN55859.1|AE015722_9 exonuclease SbcC, putative [Shewanella oneidensis MR-1] Length = 1018 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K L + +S F F Q I+F + L ++NG G GK++L + I + YG T Sbjct: 2 KPLQLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGISFALYGKT 56 >gi|85014499|ref|XP_955745.1| chromosome segregation protein [Encephalitozoon cuniculi GB-M1] gi|19171439|emb|CAD27164.1| CHROMOSOME SEGREGATION PROTEIN OF THE SMC FAMILY [Encephalitozoon cuniculi GB-M1] Length = 1017 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 27/45 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I + +FR F + + ++H I+ G+NG GKSS+ A+ ++ G Sbjct: 6 IRLKNFRSFRDEVVVPLSEHTNIIVGRNGSGKSSIVSAVHFVLCG 50 >gi|257468091|ref|ZP_05632187.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] gi|317062376|ref|ZP_07926861.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] gi|313688052|gb|EFS24887.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] Length = 1172 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F E IEF +T + G NG GKS++ +A+ W+ Sbjct: 6 VEIFGFKSFGERVYIEFNRGITSIVGPNGSGKSNILDAVLWVL 48 >gi|253583564|ref|ZP_04860762.1| chromosome partition protein smc [Fusobacterium varium ATCC 27725] gi|251834136|gb|EES62699.1| chromosome partition protein smc [Fusobacterium varium ATCC 27725] Length = 1172 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI F+ F E IEF +T + G NG GKS++ +A+ W+ Sbjct: 6 VEIFGFKSFGEKVYIEFNRGITSIVGPNGSGKSNILDAVLWVL 48 >gi|159028031|emb|CAO87991.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 690 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 28 KLLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KLL I++ +FR F EI + + T++ G NG GK+++ A W+ Y Sbjct: 2 KLLSIKLCNFRQFYGKTPEIHLAASSRNTTVIYGNNGAGKTTILNACTWVLY 53 >gi|150390368|ref|YP_001320417.1| hypothetical protein Amet_2606 [Alkaliphilus metalliredigens QYMF] gi|149950230|gb|ABR48758.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 650 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F L ++I +F+G E Q IEF T + G+N GK+++ +A WL + Sbjct: 3 FILEKLKIRNFKGIRE-QDIEFNPISTTICGENATGKTTVVDAFTWLLF 50 >gi|296131966|ref|YP_003639213.1| SMC domain protein [Thermincola sp. JR] gi|296030544|gb|ADG81312.1| SMC domain protein [Thermincola potens JR] Length = 602 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 LL++ IS+FR E ++ D LT G+N GK++ ++AI+ LF Sbjct: 3 LLEVRISNFRSLKETNWVKIHD-LTAFIGENDGGKTACTDAIKLLF 47 >gi|269123683|ref|YP_003306260.1| SMC domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315009|gb|ACZ01383.1| SMC domain protein [Streptobacillus moniliformis DSM 12112] Length = 1180 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F+ I+F +T + G NG GKS++ +AI W+ Sbjct: 6 LEINGFKSFSIKTIIDFTQGITAIVGPNGSGKSNILDAILWVL 48 >gi|237739986|ref|ZP_04570467.1| chromosome partition protein smc [Fusobacterium sp. 2_1_31] gi|229422003|gb|EEO37050.1| chromosome partition protein smc [Fusobacterium sp. 2_1_31] Length = 1183 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ Sbjct: 6 VEINGFKSFGERVYIDFNRGITSIVGPNGSGKSNILDAVLWVL 48 >gi|220931569|ref|YP_002508477.1| chromosome segregation protein SMC [Halothermothrix orenii H 168] gi|219992879|gb|ACL69482.1| chromosome segregation protein SMC [Halothermothrix orenii H 168] Length = 1185 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F + I F +T + G NG GKS++ +AI W+ Sbjct: 3 LKKLELKGFKSFAKPITINFESPITAIVGPNGSGKSNIVDAIRWVL 48 >gi|91788456|ref|YP_549408.1| chromosome segregation protein SMC [Polaromonas sp. JS666] gi|91697681|gb|ABE44510.1| Chromosome segregation protein SMC [Polaromonas sp. JS666] Length = 1182 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|73748390|ref|YP_307629.1| putative exonuclease SbcC [Dehalococcoides sp. CBDB1] gi|73660106|emb|CAI82713.1| putative exonuclease SbcC [Dehalococcoides sp. CBDB1] Length = 859 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 22/37 (59%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 27 HTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVI 63 >gi|284007904|emb|CBA73847.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 190 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EIS FRG + DH T++ G+N +GKSSL +A+ L Sbjct: 3 LQQVEISGFRGINRLSLT--LDHNTVLIGENTWGKSSLLDALTILL 46 >gi|289432438|ref|YP_003462311.1| SMC domain protein [Dehalococcoides sp. GT] gi|288946158|gb|ADC73855.1| SMC domain protein [Dehalococcoides sp. GT] Length = 859 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 22/37 (59%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 27 HTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVI 63 >gi|311746977|ref|ZP_07720762.1| putative SMC family protein [Algoriphagus sp. PR1] gi|126578674|gb|EAZ82838.1| putative SMC family protein [Algoriphagus sp. PR1] Length = 1179 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F + I F +T V G NG GKS++ +AI W+ R D ++ Sbjct: 3 LSKLEIKGFKSFGDKMVIHFDKGITGVVGPNGCGKSNVVDAIRWVLGEQKTRMLRSDKME 62 >gi|304320000|ref|YP_003853643.1| chromosome segregation protein [Parvularcula bermudensis HTCC2503] gi|303298903|gb|ADM08502.1| chromosome segregation protein [Parvularcula bermudensis HTCC2503] Length = 1157 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F E E LT + G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVEPTDFEIRPGLTGIVGPNGCGKSNLLEALRWV 47 >gi|332159251|ref|YP_004424530.1| chromosome segregation protein [Pyrococcus sp. NA2] gi|331034714|gb|AEC52526.1| chromosome segregation protein [Pyrococcus sp. NA2] Length = 879 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + +FR I +IEF + ++ GQNG GKSSL +AI Sbjct: 6 VRVENFRSHK-ISEIEFKPGINLIIGQNGAGKSSLLDAI 43 >gi|168212804|ref|ZP_02638429.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|170715536|gb|EDT27718.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 922 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 ++IE D L I+ G+N GKS+L I+ + YG +R ++ RS TP+ Sbjct: 17 KEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVDNKRGK-KTLSDRSKFTPL 68 >gi|147669170|ref|YP_001213988.1| SMC domain-containing protein [Dehalococcoides sp. BAV1] gi|146270118|gb|ABQ17110.1| SMC domain protein [Dehalococcoides sp. BAV1] Length = 859 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 22/37 (59%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 27 HTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVI 63 >gi|301055832|ref|YP_003794043.1| hypothetical protein BACI_c43090 [Bacillus anthracis CI] gi|300378001|gb|ADK06905.1| hypothetical protein BACI_c43090 [Bacillus cereus biovar anthracis str. CI] Length = 1001 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ I I FR F + + +F + + I++G NG GKS++ ++I+W G R + D Sbjct: 1 MKIQKIIIKDFRIFNGMYEFDFKNKDVIIISGPNGNGKSTIFDSIQWCLTGKIPRYEGSD 60 Query: 86 SIKK 89 +K Sbjct: 61 EWRK 64 >gi|254432485|ref|ZP_05046188.1| chromosome segregation protein SMC [Cyanobium sp. PCC 7001] gi|197626938|gb|EDY39497.1| chromosome segregation protein SMC [Cyanobium sp. PCC 7001] Length = 1203 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 23/39 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E++HF+ F I T+V G NG GKS++ +A+ Sbjct: 7 VELTHFKSFGGSMTIPLEQGFTVVTGPNGSGKSNILDAV 45 >gi|29829468|ref|NP_824102.1| hypothetical protein SAV_2926 [Streptomyces avermitilis MA-4680] gi|29606576|dbj|BAC70637.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 684 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL + + +FR F Q ++ A + ++ G NG GK++L A W YG Sbjct: 2 KLLRLTLDNFRAFYGRQTLDLAVNDSKPAVLIFGNNGAGKTTLLNAFAWALYG 54 >gi|183602670|ref|ZP_02964034.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis HN019] gi|219682502|ref|YP_002468885.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis AD011] gi|241190069|ref|YP_002967463.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195475|ref|YP_002969030.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218088|gb|EDT88735.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis HN019] gi|219620152|gb|ACL28309.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis AD011] gi|240248461|gb|ACS45401.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250029|gb|ACS46968.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177772|gb|ADC85018.1| RecF [Bifidobacterium animalis subsp. lactis BB-12] gi|295793056|gb|ADG32591.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis V9] Length = 475 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + HFR +T ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 7 LALDHFRSWTNCV-LDFKPGVNILEGPNGLGKTNIVEALEVLSTGSSHR 54 >gi|160935861|ref|ZP_02083235.1| hypothetical protein CLOBOL_00754 [Clostridium bolteae ATCC BAA-613] gi|158441103|gb|EDP18820.1| hypothetical protein CLOBOL_00754 [Clostridium bolteae ATCC BAA-613] Length = 627 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+L + I F F ++ I F D L +V G+N GKS+L I + +G ++R Sbjct: 7 MKILSLHIEGFGKFHDL-DISFKDGLNVVYGKNEAGKSTLHTFIRGMLFGIEKQR 60 >gi|225851132|ref|YP_002731366.1| putative DNA double-strand break repair protein Rad50 [Persephonella marina EX-H1] gi|225645387|gb|ACO03573.1| putative DNA double-strand break repair protein Rad50 [Persephonella marina EX-H1] Length = 893 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 34 ISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +F TE + I F D +T+ G+NG GKSS+ E I + YG T + Sbjct: 8 LKNFLTHTETE-INFPDKGITVFIGENGAGKSSIIEGISYALYGKTSK 54 >gi|254516512|ref|ZP_05128571.1| putative RecF/RecN/SMC N terminal domain [gamma proteobacterium NOR5-3] gi|219674935|gb|EED31302.1| putative RecF/RecN/SMC N terminal domain [gamma proteobacterium NOR5-3] Length = 673 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ + +FR F +EF+ ++T+V+G+NG GK+++ AI W F+ Sbjct: 3 LKNLMMVNFRQFYGENYLEFSTDRRKNITLVHGENGVGKTTILNAILWCFF 53 >gi|169344200|ref|ZP_02865182.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169297658|gb|EDS79758.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 922 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 ++IE D L I+ G+N GKS+L I+ + YG +R ++ RS TP+ Sbjct: 17 KEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK-TLSDRSKYTPL 68 >gi|297625207|ref|YP_003686970.1| DNA replication and repair protein recF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296920972|emb|CBL55509.1| DNA replication and repair protein recF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 433 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +E+ FR + E K++ +++ G NG+GK++L EA+E+L Sbjct: 6 LELKDFRSY-EAAKLDIGPGVSVFVGPNGHGKTNLVEAVEYL 46 >gi|315498141|ref|YP_004086945.1| chromosome segregation protein smc [Asticcacaulis excentricus CB 48] gi|315416153|gb|ADU12794.1| chromosome segregation protein SMC [Asticcacaulis excentricus CB 48] Length = 1154 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +++S F+ F + + LT + G NG GKS+L EA+ W+ + + G Sbjct: 6 LKLSGFKSFVDASEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGATSAKAMRG 58 >gi|188535876|ref|YP_001905936.1| Predicted ATP-dependent endonuclease of the OLD family [Erwinia tasmaniensis Et1/99] gi|188027180|emb|CAO95007.1| Predicted ATP-dependent endonuclease of the OLD family [Erwinia tasmaniensis Et1/99] Length = 608 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 30/47 (63%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I++++FRG+ +I + +T + G+N +GKS++ EA+ F Sbjct: 2 RLKKIKLTNFRGYRNTIEIPVDEAMTGIVGRNDFGKSTILEALAIFF 48 >gi|294506894|ref|YP_003570952.1| Chromosome segregation protein SMC [Salinibacter ruber M8] gi|294343222|emb|CBH24000.1| Chromosome segregation protein SMC [Salinibacter ruber M8] Length = 1186 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +E+ F+ F + + F +T + G NG GKS++ +AI W+ Sbjct: 3 LSKLELQGFKSFADETTLTFDPGVTTIVGPNGCGKSNIVDAIRWV 47 >gi|83814851|ref|YP_445024.1| chromosome segregation protein SMC [Salinibacter ruber DSM 13855] gi|83756245|gb|ABC44358.1| chromosome segregation protein SMC [Salinibacter ruber DSM 13855] Length = 1186 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +E+ F+ F + + F +T + G NG GKS++ +AI W+ Sbjct: 3 LSKLELQGFKSFADETTLTFDPGVTTIVGPNGCGKSNIVDAIRWV 47 >gi|83313080|ref|YP_423344.1| chromosome segregation ATPase [Magnetospirillum magneticum AMB-1] gi|82947921|dbj|BAE52785.1| Chromosome segregation ATPase [Magnetospirillum magneticum AMB-1] Length = 1154 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +S F+ F + ++ +T V G NG GKS+L EA+ W+ + R+ G Sbjct: 1 MIQFTKLRLSGFKSFVDPAELVIEPGMTGVVGPNGCGKSNLIEALRWVMGETSARQMRG 59 >gi|23016160|ref|ZP_00055919.1| COG1196: Chromosome segregation ATPases [Magnetospirillum magnetotacticum MS-1] Length = 1154 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +S F+ F + ++ +T V G NG GKS+L EA+ W+ + R+ G Sbjct: 1 MIQFTKLRLSGFKSFVDPAELVIEPGMTGVVGPNGCGKSNLIEALRWVMGETSARQMRG 59 >gi|313904967|ref|ZP_07838338.1| hypothetical protein EubceDRAFT_1053 [Eubacterium cellulosolvens 6] gi|313470224|gb|EFR65555.1| hypothetical protein EubceDRAFT_1053 [Eubacterium cellulosolvens 6] Length = 919 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L++ IS+F E +I F L V +NG+GKS+ + + +FYG+ +K S Sbjct: 2 RLVECYISNFGCLHE-NRIRFVRGLNTVLKENGWGKSTFAHFLLAMFYGFDNDKKKKTSE 60 Query: 88 KKR 90 + R Sbjct: 61 RPR 63 >gi|257124818|ref|YP_003162932.1| DNA replication and repair protein RecF [Leptotrichia buccalis C-1013-b] gi|257048757|gb|ACV37941.1| DNA replication and repair protein RecF [Leptotrichia buccalis C-1013-b] Length = 362 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I ++FR + K++F + ++ G+NG GK+SL EA+ +L G + R K I+K + Sbjct: 6 ISFNNFRCLVD-GKLKFDRYFNLIYGKNGQGKTSLIEAVHFLATGKSFRTKKVKEIRKYN 64 Query: 92 I 92 + Sbjct: 65 L 65 >gi|290558912|gb|EFD92300.1| hypothetical protein BJBARM5_1095 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 326 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +I + + R + I KI+F++ + I+ G G GKSS+ ++E+ +G Sbjct: 3 LSEINLENIRSHS-ITKIKFSEGINIITGNTGSGKSSILMSVEYALFG 49 >gi|297588377|ref|ZP_06947020.1| probable DNA double-strand break repair ATPase [Finegoldia magna ATCC 53516] gi|297573750|gb|EFH92471.1| probable DNA double-strand break repair ATPase [Finegoldia magna ATCC 53516] Length = 750 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I +L I F +T IEF + ++ G N GK+++S+ IE +FYG+ + Sbjct: 3 IIRLDLISFGRFNNYT----IEFGEKFNLIYGLNESGKTTISKFIEGVFYGFVK 52 >gi|198282751|ref|YP_002219072.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667121|ref|YP_002424946.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247272|gb|ACH82865.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519334|gb|ACK79920.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 23270] Length = 558 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 LL++++ F + I+FA LT++ G+ G GKS L +AI L G+ + +HG Sbjct: 2 LLNLQVRDF-ALIDAVSIDFAAGLTVLTGETGAGKSILVDAIALLLGDKGHAEDIRHG 58 >gi|48477311|ref|YP_023017.1| chromosome segregation protein [Picrophilus torridus DSM 9790] gi|48429959|gb|AAT42824.1| DNA repair protein Rad50 [Picrophilus torridus DSM 9790] Length = 880 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 25/35 (71%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +IEF +TI+ G+NG GK+S+ +AI++ + T+ Sbjct: 18 EIEFTPGITIITGKNGAGKTSIVDAIKFALFTETR 52 >gi|20806546|ref|NP_621717.1| recombinational DNA repair ATPase [Thermoanaerobacter tengcongensis MB4] gi|254478930|ref|ZP_05092292.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] gi|51316490|sp|Q8RDL3|RECF_THETN RecName: Full=DNA replication and repair protein recF gi|20514983|gb|AAM23321.1| Recombinational DNA repair ATPase [Thermoanaerobacter tengcongensis MB4] gi|214035152|gb|EEB75864.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] Length = 364 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +I + +FR + QK+EF + + ++ G N GKS+L EAI L G + R Sbjct: 3 LKEIFVDNFRNLKK-QKLEFCEGVNLIYGLNAQGKSNLLEAIRLLSMGRSFR 53 >gi|312888760|ref|ZP_07748324.1| chromosome segregation protein SMC [Mucilaginibacter paludis DSM 18603] gi|311298760|gb|EFQ75865.1| chromosome segregation protein SMC [Mucilaginibacter paludis DSM 18603] Length = 1180 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +E+ F+ F + I F + +T + G NG GKS++ ++I W+ Sbjct: 2 QLTRLEVKGFKSFGDKITINFNEGITAIVGPNGCGKSNVVDSIRWVL 48 >gi|288818022|ref|YP_003432369.1| ATP-dependent dsDNA exonuclease C subunit [Hydrogenobacter thermophilus TK-6] gi|288787421|dbj|BAI69168.1| ATP-dependent dsDNA exonuclease C subunit [Hydrogenobacter thermophilus TK-6] gi|308751623|gb|ADO45106.1| SMC domain protein [Hydrogenobacter thermophilus TK-6] Length = 963 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++ +F + ++Q+I+F+D + I+ G+ G GK+S+ +A+ + YG R K G SI Sbjct: 6 LKLENFTTYKKLQEIDFSDLNFFIIQGRTGAGKTSIIDAMCYALYGKVPRYK-GTSI 61 >gi|256846511|ref|ZP_05551968.1| ABC transporter ATP-binding protein [Fusobacterium sp. 3_1_36A2] gi|256718280|gb|EEU31836.1| ABC transporter ATP-binding protein [Fusobacterium sp. 3_1_36A2] Length = 671 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 6/54 (11%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L I++ +FR F ++ K+ F + ++T++ G NG GK++L+ A W YG Sbjct: 2 QLKSIKLINFRQFKDL-KVSFENSNVGRNVTLIFGDNGSGKTTLANAFIWCLYG 54 >gi|77919950|ref|YP_357765.1| chromosome segregation SMC protein [Pelobacter carbinolicus DSM 2380] gi|77546033|gb|ABA89595.1| condensin subunit Smc [Pelobacter carbinolicus DSM 2380] Length = 1173 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 24/41 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 IEI F+ F + ++F + V G NG GKS++ +AI W Sbjct: 6 IEIVGFKSFVDRVALDFGPGIAAVVGPNGCGKSNVVDAIRW 46 >gi|260219437|emb|CBA26282.1| hypothetical protein Csp_E33700 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1102 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|225848653|ref|YP_002728816.1| ATP/GTP-binding protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643843|gb|ACN98893.1| ATP/GTP-binding protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 484 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL I I +FR + + ++E D LT+ G N GKSS+ EA++ F Sbjct: 2 KLRKINIENFRCYKDETEVEIED-LTVFVGANDSGKSSILEALDIFF 47 >gi|188524094|ref|ZP_03004177.1| p115 protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273458|ref|ZP_03205994.1| p115 protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554096|ref|YP_002284563.1| p115 protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|195659955|gb|EDX53335.1| p115 protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249978|gb|EDY74758.1| p115 protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541597|gb|ACI59826.1| p115 protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 981 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|185178803|ref|ZP_02964597.1| p115 protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024147|ref|ZP_02996877.1| p115 protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518544|ref|ZP_03004008.1| p115 protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|184209428|gb|EDU06471.1| p115 protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018774|gb|EDU56814.1| p115 protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997904|gb|EDU67001.1| p115 protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 981 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|153010465|ref|YP_001371679.1| ATPase involved in DNA repair-like protein [Ochrobactrum anthropi ATCC 49188] gi|151562353|gb|ABS15850.1| ATPase involved in DNA repair-like protein [Ochrobactrum anthropi ATCC 49188] Length = 875 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +E+ +FR F E +I+ F D L IV N GKS+L EA+ F+ Sbjct: 3 LKSLEVENFRKFREPLRIDGFTDGLNIVVEPNETGKSTLLEALRAAFF 50 >gi|125719147|ref|YP_001036280.1| recombination protein F [Streptococcus sanguinis SK36] gi|166221875|sp|A3CRC5|RECF_STRSV RecName: Full=DNA replication and repair protein recF gi|125499064|gb|ABN45730.1| DNA replication and repair protein recF, putative [Streptococcus sanguinis SK36] Length = 364 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|22036085|dbj|BAC06579.1| hypothetical ATP-binding protein [Vibrio parahaemolyticus] gi|209364500|dbj|BAG74739.1| putative nucleotide-binding protein [Vibrio parahaemolyticus] Length = 560 Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKS----SLSEAIEWL 73 S + K L+ +E+ FR F + +I F LT++ G NG GK+ S+S+ + WL Sbjct: 64 SDFTPKNKLNLVQLELFDFRKFKHL-RISFEPKLTVIIGNNGQGKTALLNSISKTLSWL 121 >gi|330973311|gb|EGH73377.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 1162 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + F ++ V NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVAPNGCGKSNIIDAVRWVMGESSAKNLRGESM 61 >gi|292491546|ref|YP_003526985.1| chromosome segregation protein SMC [Nitrosococcus halophilus Nc4] gi|291580141|gb|ADE14598.1| chromosome segregation protein SMC [Nitrosococcus halophilus Nc4] Length = 1169 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F + + + + G NG GKS++ +A+ W+ + + GDS+ Sbjct: 2 RLKKIKLAGFKSFVDPTSLPLPSNCVAIVGPNGCGKSNVIDAVRWVMGESSAKHLRGDSM 61 >gi|260437692|ref|ZP_05791508.1| DNA replication and repair protein RecF [Butyrivibrio crossotus DSM 2876] gi|292809918|gb|EFF69123.1| DNA replication and repair protein RecF [Butyrivibrio crossotus DSM 2876] Length = 361 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I++ +FR + E +KIEF ++ I+ G N GK+++ EAI Sbjct: 6 IDLQNFRNY-ETEKIEFDENTNILYGDNAQGKTNILEAI 43 >gi|237808367|ref|YP_002892807.1| RecF/RecN/SMC N domain-containing protein [Tolumonas auensis DSM 9187] gi|237500628|gb|ACQ93221.1| RecF/RecN/SMC N domain protein [Tolumonas auensis DSM 9187] Length = 650 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +++I FR F + ++ + L ++ G+NG GK+++ AI LF+ Sbjct: 3 LSNLKIQGFRCFDKDFNVQLTNGLNVIVGENGAGKTAIISAIRQLFH 49 >gi|269860026|ref|XP_002649736.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348] gi|220066795|gb|EED44266.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348] Length = 1180 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L+ ++I R F + +IEF LT++ GQNG GK+++ E +++L G Sbjct: 1 MIRLISLDIKGIRSFDPHKSNRIEFDVPLTLIVGQNGTGKTTIIECLKYLTTG 53 >gi|195867740|ref|ZP_03079741.1| p115 protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660595|gb|EDX53851.1| p115 protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 981 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|171920660|ref|ZP_02931893.1| p115 protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903393|gb|EDT49682.1| p115 protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 981 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|88601344|ref|YP_501522.1| chromosome segregation protein SMC [Methanospirillum hungatei JF-1] gi|88186806|gb|ABD39803.1| condensin subunit Smc [Methanospirillum hungatei JF-1] Length = 1146 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +EI +F+ F KI F T+++G NG GKS++ ++I Sbjct: 6 LEIDNFKSFGRKTKIPFLPGFTVISGPNGSGKSNIIDSI 44 >gi|332529210|ref|ZP_08405174.1| chromosome segregation protein SMC [Hylemonella gracilis ATCC 19624] gi|332041433|gb|EGI77795.1| chromosome segregation protein SMC [Hylemonella gracilis ATCC 19624] Length = 1177 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|312377980|gb|EFR24675.1| hypothetical protein AND_10572 [Anopheles darlingi] Length = 352 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 F +QKI F LT++ GQNG GK+++ IE L YG T Sbjct: 39 FLYLQKITFTTPLTLIVGQNGCGKTTV---IECLKYGLT 74 >gi|294790226|ref|ZP_06755384.1| RecF protein [Scardovia inopinata F0304] gi|294458123|gb|EFG26476.1| RecF protein [Scardovia inopinata F0304] Length = 422 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + + H+R + I+ D + ++ G NG GK+++ EAIE+L + R + +R Sbjct: 6 LALDHYRSWNTCL-IDLTDSVNVLYGHNGLGKTNIVEAIEFLSTSSSHRVNSSQPLIQRG 64 Query: 92 IK 93 K Sbjct: 65 YK 66 >gi|256423704|ref|YP_003124357.1| chromosome segregation protein SMC [Chitinophaga pinensis DSM 2588] gi|256038612|gb|ACU62156.1| chromosome segregation protein SMC [Chitinophaga pinensis DSM 2588] Length = 1176 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +EI F+ F + + F + +T V G NG GKS++ ++I W+ Sbjct: 2 RLKTLEIKGFKSFADKTVLHFDEGVTGVIGPNGCGKSNIIDSIRWV 47 >gi|323350818|ref|ZP_08086477.1| recombination protein F [Streptococcus sanguinis VMC66] gi|322122992|gb|EFX94695.1| recombination protein F [Streptococcus sanguinis VMC66] Length = 364 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|291279978|ref|YP_003496813.1| DNA repair protein RecN [Deferribacter desulfuricans SSM1] gi|290754680|dbj|BAI81057.1| DNA repair protein RecN [Deferribacter desulfuricans SSM1] Length = 547 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++I +F F E IEF + L I+ G+ G GKS L +AI+ + + K D KK Sbjct: 5 LKIKNFSVFDETS-IEFENGLNIITGETGAGKSVLIDAIKMVLGDRFSKEKQRDLAKK 61 >gi|295687792|ref|YP_003591485.1| chromosome segregation protein SMC [Caulobacter segnis ATCC 21756] gi|295429695|gb|ADG08867.1| chromosome segregation protein SMC [Caulobacter segnis ATCC 21756] Length = 1147 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E + LT + G NG GKS+L EA+ W+ Sbjct: 6 LRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWV 47 >gi|269836286|ref|YP_003318514.1| chromosome segregation protein SMC [Sphaerobacter thermophilus DSM 20745] gi|269785549|gb|ACZ37692.1| chromosome segregation protein SMC [Sphaerobacter thermophilus DSM 20745] Length = 1183 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKH 83 +L +E+ F+ F F +T + G NG GKS+++EA+ W Y + R+ Sbjct: 4 RLKRLELHGFKSFATPTTFVFDPGITAIIGPNGSGKSNIAEAVRWALGEQSYASLRGRRT 63 Query: 84 GDSI-KKRSIKTPMPM 98 D I + + P+ M Sbjct: 64 EDVIFAGSAARAPLGM 79 >gi|254780766|ref|YP_003065179.1| recombination protein F [Candidatus Liberibacter asiaticus str. psy62] gi|254040443|gb|ACT57239.1| recombination protein F [Candidatus Liberibacter asiaticus str. psy62] Length = 375 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + IS FR + ++ + A H TI G NG GK+++ EAI +L G RR Sbjct: 6 KIKFLNISEFRNYASLRLVFDAQH-TIFVGDNGVGKTNILEAISFLSPGRGFRR 58 >gi|209886101|ref|YP_002289958.1| chromosome segregation protein SMC [Oligotropha carboxidovorans OM5] gi|209874297|gb|ACI94093.1| chromosome segregation protein SMC [Oligotropha carboxidovorans OM5] Length = 1154 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + + F+ F E LT V G NG GKS+L EA+ W+ Sbjct: 2 KLTRLRLHGFKSFVEATDFLIEPGLTGVVGPNGCGKSNLVEALRWV 47 >gi|16124628|ref|NP_419192.1| smc protein [Caulobacter crescentus CB15] gi|221233316|ref|YP_002515752.1| chromosome partition protein smc [Caulobacter crescentus NA1000] gi|6007012|gb|AAF00713.1|AF172724_1 structural maintenance of chromosomes protein homolog Smc [Caulobacter crescentus CB15] gi|13421528|gb|AAK22360.1| smc protein [Caulobacter crescentus CB15] gi|220962488|gb|ACL93844.1| chromosome partition protein smc [Caulobacter crescentus NA1000] Length = 1147 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +S F+ F E + LT + G NG GKS+L EA+ W+ Sbjct: 6 LRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWV 47 >gi|324989568|gb|EGC21514.1| recombination protein F [Streptococcus sanguinis SK353] Length = 364 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|159042719|ref|YP_001531513.1| chromosome segregation protein SMC [Dinoroseobacter shibae DFL 12] gi|157910479|gb|ABV91912.1| chromosome segregation protein SMC [Dinoroseobacter shibae DFL 12] Length = 1150 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|86137244|ref|ZP_01055822.1| SMC protein [Roseobacter sp. MED193] gi|85826568|gb|EAQ46765.1| SMC protein [Roseobacter sp. MED193] Length = 1151 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|158312746|ref|YP_001505254.1| hypothetical protein Franean1_0892 [Frankia sp. EAN1pec] gi|158108151|gb|ABW10348.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length = 890 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + FRG + + LT+V G+NG GKSS +EA E G T+R Sbjct: 84 LESIGVQGFRGIGPLAVLPLRPGPGLTLVTGRNGSGKSSFAEAAEIALTGDTRR 137 >gi|327537558|gb|EGF24275.1| conserved hypothetical protein, membrane [Rhodopirellula baltica WH47] Length = 1350 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ DI+I F +T + + +T+ G N GK++L + + + YG+T+ R+ Sbjct: 2 KIKDIQIDGFGVWTGLSVDSLPEGMTLFYGPNEAGKTTLMQFLRAMLYGFTEERRQ 57 >gi|324991876|gb|EGC23799.1| recombination protein F [Streptococcus sanguinis SK405] gi|324996234|gb|EGC28144.1| recombination protein F [Streptococcus sanguinis SK678] gi|327458500|gb|EGF04850.1| recombination protein F [Streptococcus sanguinis SK1] gi|327471598|gb|EGF17041.1| recombination protein F [Streptococcus sanguinis SK408] gi|327490328|gb|EGF22115.1| recombination protein F [Streptococcus sanguinis SK1058] Length = 364 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTR 55 >gi|225180935|ref|ZP_03734383.1| chromosome segregation protein SMC [Dethiobacter alkaliphilus AHT 1] gi|225168416|gb|EEG77219.1| chromosome segregation protein SMC [Dethiobacter alkaliphilus AHT 1] Length = 1193 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ F+ F + + +T+V G NG GKS++++A+ W+ + R G Sbjct: 6 LEMHGFKSFGDKTIFDLTPGITVVVGPNGCGKSNITDAVRWVLGEQSARHLRG 58 >gi|172056049|ref|YP_001812509.1| DNA replication and repair protein RecF [Exiguobacterium sibiricum 255-15] gi|226737799|sp|B1YGB5|RECF_EXIS2 RecName: Full=DNA replication and repair protein recF gi|171988570|gb|ACB59492.1| DNA replication and repair protein RecF [Exiguobacterium sibiricum 255-15] Length = 384 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + +SH+R + ++ + F++ ++ G+N GK++L EAI L + R H Sbjct: 2 RLDSVRLSHYRNYESLE-LSFSEKTNVLIGENAQGKTNLLEAIYVLALAKSHRTTH 56 >gi|332359507|gb|EGJ37326.1| recombination protein F [Streptococcus sanguinis SK1056] Length = 287 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++I HFR + E I+F L + GQN GK+++ EAI +L + R Sbjct: 6 LKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHR 53 >gi|257126140|ref|YP_003164254.1| SMC domain protein [Leptotrichia buccalis C-1013-b] gi|257050079|gb|ACV39263.1| SMC domain protein [Leptotrichia buccalis C-1013-b] Length = 1209 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F +EF + +T + G NG GKS++ +AI W+ Sbjct: 6 LELTGFKSFANRTVVEFDNGITSIVGPNGSGKSNILDAILWVL 48 >gi|189426540|ref|YP_001953717.1| chromosome segregation protein SMC [Geobacter lovleyi SZ] gi|189422799|gb|ACD97197.1| chromosome segregation protein SMC [Geobacter lovleyi SZ] Length = 1177 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 28/45 (62%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 K+ +EI+ F+ F + ++F +T V G NG GKS++ +A+ W Sbjct: 2 KIKRLEIAGFKSFADKVVLDFQQGVTGVVGPNGCGKSNIVDAMRW 46 >gi|326536438|ref|YP_004300868.1| endonuclease subunit [Aeromonas phage 65] gi|40795444|gb|AAR90909.1| endonuclease subunit [Aeromonas phage 65] Length = 775 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 21/29 (72%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 T+V G NG GKS++ EA+ +L YG + R+ Sbjct: 31 TLVTGTNGAGKSTMIEALSFLLYGKSYRK 59 >gi|261315262|ref|ZP_05954459.1| SMC protein [Brucella pinnipedialis M163/99/10] gi|261304288|gb|EEY07785.1| SMC protein [Brucella pinnipedialis M163/99/10] Length = 267 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + + + F+ F E + LT V G NG GKS+L EA+ W+ Sbjct: 1 MLMRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVM 50 >gi|229824638|ref|ZP_04450707.1| hypothetical protein GCWU000282_01985 [Catonella morbi ATCC 51271] gi|229786009|gb|EEP22123.1| hypothetical protein GCWU000282_01985 [Catonella morbi ATCC 51271] Length = 384 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL +++SHFR + I+ + LTI+ G+N GK++L E+I L + R H Sbjct: 1 MKLKTLKLSHFRNYQGIE-LCLGPGLTILTGENAQGKTNLLESIFLLSLAKSHRTNH 56 >gi|226307718|ref|YP_002767678.1| nuclease SbcCD subunit C [Rhodococcus erythropolis PR4] gi|226186835|dbj|BAH34939.1| probable nuclease SbcCD subunit C [Rhodococcus erythropolis PR4] Length = 992 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+S F F + +++F AD L +++G G GK+++ +A+ + YG Sbjct: 2 RLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVSFALYG 54 >gi|90579612|ref|ZP_01235421.1| hypothetical protein VAS14_01581 [Vibrio angustum S14] gi|90439186|gb|EAS64368.1| hypothetical protein VAS14_01581 [Vibrio angustum S14] Length = 579 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ + +++FR F + Q IEFA +T++ G N GKS++ A+ +L Sbjct: 2 KITKLSLTNFRSFKQTQTIEFAP-VTLLFGPNSVGKSTVLMALFYL 46 >gi|83950950|ref|ZP_00959683.1| hypothetical protein ISM_07610 [Roseovarius nubinhibens ISM] gi|83838849|gb|EAP78145.1| hypothetical protein ISM_07610 [Roseovarius nubinhibens ISM] Length = 798 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVN--GQNGYGKSSLSEAIEWLFY 75 K+ I +S FRG + ++F+ V G+N GKS++++A+EW + Sbjct: 3 KIRKITVSRFRGARFVLPLDFSKSTKSVAIFGENASGKSTITDALEWFIH 52 >gi|225390119|ref|ZP_03759843.1| hypothetical protein CLOSTASPAR_03869 [Clostridium asparagiforme DSM 15981] gi|225043811|gb|EEG54057.1| hypothetical protein CLOSTASPAR_03869 [Clostridium asparagiforme DSM 15981] Length = 1152 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR---RKHGDSIKKRSIKT 94 Q +EF +++ + +G +G GKS++ +AI+ L YG + K D +R++ T Sbjct: 22 QVMEFNEYVNLFSGMSGSGKSTVMDAIQVLLYGSLSQNFLNKAADEKNRRTVMT 75 >gi|206900621|ref|YP_002251531.1| DNA replication and repair protein RecF, putative [Dictyoglomus thermophilum H-6-12] gi|206739724|gb|ACI18782.1| DNA replication and repair protein RecF, putative [Dictyoglomus thermophilum H-6-12] Length = 340 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 I + +FR F++ F D + ++ G NG GK+S+ EAI +L Sbjct: 11 ISLKNFRNFSDFST-SFKDGINVIYGPNGSGKTSILEAIAYL 51 >gi|183220805|ref|YP_001838801.1| chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910905|ref|YP_001962460.1| chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775581|gb|ABZ93882.1| Chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779227|gb|ABZ97525.1| Chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 927 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I F+ F + +I F T V G NG GKS++ ++++W+F Sbjct: 3 LKSLNIVGFKTFADETEINFDPGFTAVVGPNGSGKSNIVDSVKWVF 48 >gi|118595067|ref|ZP_01552414.1| hypothetical protein MB2181_05325 [Methylophilales bacterium HTCC2181] gi|118440845|gb|EAV47472.1| hypothetical protein MB2181_05325 [Methylophilales bacterium HTCC2181] Length = 655 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 9/42 (21%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 +T+V+GQN GK+S+ AI+W YG +IK + IK Sbjct: 31 VTLVDGQNTNGKTSIGRAIQWCLYG---------NIKNKGIK 63 >gi|16330164|ref|NP_440892.1| recombination protein F [Synechocystis sp. PCC 6803] gi|6093944|sp|P73532|RECF_SYNY3 RecName: Full=DNA replication and repair protein recF gi|1652652|dbj|BAA17572.1| RecF protein [Synechocystis sp. PCC 6803] Length = 384 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 FR + E +++EF+ TI+ G N GKS+L EA+E L Sbjct: 11 FRNYLE-EEVEFSAQKTILVGNNAQGKSNLLEAVELL 46 >gi|120405388|ref|YP_955217.1| hypothetical protein Mvan_4435 [Mycobacterium vanbaalenii PYR-1] gi|119958206|gb|ABM15211.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length = 885 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++++RG T + IEF D + +V+G N GKSS+ EA++ L + D Sbjct: 2 KLHRLALTNYRGITH-RDIEFPDRGVVVVSGPNEAGKSSMLEALDLLL-------ESKDR 53 Query: 87 IKKRSIKTPMP 97 K+ +K P Sbjct: 54 SSKKEVKQVKP 64 >gi|46447340|ref|YP_008705.1| putative DNA replication and repair protein recF [Candidatus Protochlamydia amoebophila UWE25] gi|51316228|sp|Q6MAG9|RECF_PARUW RecName: Full=DNA replication and repair protein recF gi|46400981|emb|CAF24430.1| putative DNA replication and repair protein recF [Candidatus Protochlamydia amoebophila UWE25] Length = 359 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + HFR + E +EF+ ++ G N GK++L EAI L G + R H Sbjct: 8 LQHFRNYEEA-YLEFSPQFNLICGPNAKGKTTLLEAIHCLMIGRSFRTSH 56 >gi|325697439|gb|EGD39325.1| RecF/RecN/SMC N domain protein [Streptococcus sanguinis SK160] Length = 899 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ F + I+F+ +T + G NG+GK+++ +AIE G R Sbjct: 2 KIKKILLYNFKNFRQKTIIDFSKDITFLVGPNGFGKTTIFDAIELGLTGNLSR 54 >gi|310822922|ref|YP_003955280.1| Chromosome segregation protein SMC [Stigmatella aurantiaca DW4/3-1] gi|309395994|gb|ADO73453.1| Chromosome segregation protein SMC [Stigmatella aurantiaca DW4/3-1] Length = 1198 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 25/41 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++I+ F+ F + F D +T + G NG GKS++ +AI W Sbjct: 6 LDITGFKSFMDRSVFSFDDGVTGIVGPNGCGKSNVVDAIRW 46 >gi|262381018|ref|ZP_06074156.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296195|gb|EEY84125.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 639 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 ++ + +FRG T I F+ + T++ G NG GK+ +++A WL +G + + IK R Sbjct: 7 ELSLVNFRGLT--INISFSAN-TLILGMNGIGKTRVNDAFLWLLFGKDTQGRQDYEIKPR 63 >gi|261417102|ref|YP_003250785.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] gi|32452356|emb|CAD66598.2| SMC protein [Fibrobacter succinogenes] gi|261373558|gb|ACX76303.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326426|gb|ADL25627.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1184 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 ++ ++I F+ F + +I F LT V G NG GKS++++AI W+ Sbjct: 2 QITKLKIFGFKSFAQRTEINFPTKGLTAVVGPNGCGKSNITDAIRWVL 49 >gi|15678568|ref|NP_275683.1| intracellular protein transport protein [Methanothermobacter thermautotrophicus str. Delta H] gi|18201989|sp|O26640|RAD50_METTH RecName: Full=DNA double-strand break repair rad50 ATPase gi|2621615|gb|AAB85046.1| intracellular protein transport protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 837 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ + R + E ++EF D +T+ G G GK++L A+E+ +G +R GDS+ Sbjct: 6 LELKNIRSY-ESGRVEFDDGVTLFEGDIGSGKTTLLLAVEFALFGLGDQR--GDSL 58 >gi|218295508|ref|ZP_03496321.1| SMC domain protein [Thermus aquaticus Y51MC23] gi|218244140|gb|EED10666.1| SMC domain protein [Thermus aquaticus Y51MC23] Length = 1007 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + F+ F E ++F D +T + G NG GKS+L EAI ++ Sbjct: 9 LTLQGFKSFAERTVLDFPDPITGIIGPNGSGKSNLVEAIRFV 50 >gi|114568557|ref|YP_755237.1| DNA replication and repair protein RecF [Maricaulis maris MCS10] gi|114339019|gb|ABI64299.1| DNA replication and repair protein RecF [Maricaulis maris MCS10] Length = 384 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + +++FR + ++ +E + + G+NG GK++L EAI +L G R D + RS Sbjct: 17 LRLTNFRSYPDLD-LELSPAPVALFGENGAGKTNLLEAISFLAPGRGMRSAGADGVATRS 75 >gi|20808433|ref|NP_623604.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] gi|20517049|gb|AAM25208.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] Length = 549 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 19/31 (61%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I F D T++ G NG GK+S+ EAI W G Sbjct: 19 INFNDKNTVIYGDNGTGKTSIGEAIAWCLTG 49 >gi|319793882|ref|YP_004155522.1| chromosome segregation protein smc [Variovorax paradoxus EPS] gi|315596345|gb|ADU37411.1| chromosome segregation protein SMC [Variovorax paradoxus EPS] Length = 1171 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|259047901|ref|ZP_05738302.1| DNA replication and repair protein RecF [Granulicatella adiacens ATCC 49175] gi|259035578|gb|EEW36833.1| DNA replication and repair protein RecF [Granulicatella adiacens ATCC 49175] Length = 375 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL ++++ +FR + +Q +EF D + + G+N GK++L E+I L + R Sbjct: 2 KLTNLQLQNFRNYESVQ-LEFTDGVHVFIGENAQGKTNLMESIYALAMTKSHR 53 >gi|239815928|ref|YP_002944838.1| chromosome segregation protein SMC [Variovorax paradoxus S110] gi|239802505|gb|ACS19572.1| chromosome segregation protein SMC [Variovorax paradoxus S110] Length = 1171 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|169334730|ref|ZP_02861923.1| hypothetical protein ANASTE_01136 [Anaerofustis stercorihominis DSM 17244] gi|169257468|gb|EDS71434.1| hypothetical protein ANASTE_01136 [Anaerofustis stercorihominis DSM 17244] Length = 816 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRKH 83 K+ + I F F + ++IEF + L IV G N GKS+ + I+ +F+G Y++ + + Sbjct: 2 KIKKLGIKSFGKFQD-KEIEFKNGLNIVYGNNEAGKSTTHKFIQGMFFGFFKPYSKNKLY 60 Query: 84 GDSIKK 89 D K+ Sbjct: 61 SDEYKR 66 >gi|323692596|ref|ZP_08106829.1| hypothetical protein HMPREF9475_01692 [Clostridium symbiosum WAL-14673] gi|323503462|gb|EGB19291.1| hypothetical protein HMPREF9475_01692 [Clostridium symbiosum WAL-14673] Length = 1069 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFA--DH-LTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K L + +S F + I +I+FA DH L ++ G G GK+++ +A+ + YG T Sbjct: 2 KPLKVTMSAFSSYAGITEIDFAKVDHGLFLITGDTGAGKTTIFDAVSFALYGET 55 >gi|332710639|ref|ZP_08430584.1| condensin subunit Smc [Lyngbya majuscula 3L] gi|332350694|gb|EGJ30289.1| condensin subunit Smc [Lyngbya majuscula 3L] Length = 1315 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 25/39 (64%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +E+S F+ F KI + T+++G NG GKS++ +A+ Sbjct: 7 VELSRFKSFGGTTKIPLLEGFTVISGPNGSGKSNILDAL 45 >gi|328950833|ref|YP_004368168.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451157|gb|AEB12058.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] Length = 905 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + ++ F + E Q+I F D L + G G GKS+L +AI + YG T R Sbjct: 4 LRLVVAGFGAYREPQEIPFDDVELFAITGPTGSGKSTLLDAICFALYGKTPR 55 >gi|255535366|ref|YP_003095737.1| DNA repair ATPase [Flavobacteriaceae bacterium 3519-10] gi|255341562|gb|ACU07675.1| ATPase involved in DNA repair [Flavobacteriaceae bacterium 3519-10] Length = 699 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ I+ +FR + +I F+ +++I+ G+NG+GK++ ++ W+FYG Sbjct: 2 KINRIKFQNFRIYKGENEILFSPNPSKNISIIAGKNGFGKTTFLTSLIWVFYG 54 >gi|166365925|ref|YP_001658198.1| hypothetical protein MAE_31840 [Microcystis aeruginosa NIES-843] gi|166088298|dbj|BAG03006.1| unknown protein [Microcystis aeruginosa NIES-843] Length = 648 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Query: 44 QKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 Q I F H + I+ G NG+GK+SL AI W YG D + K ++KT Sbjct: 19 QNITFNLHPDRKIQIIFGNNGHGKTSLMTAILWCLYGV-------DIVSKETLKT 66 >gi|220927386|ref|YP_002502688.1| chromosome segregation protein SMC [Methylobacterium nodulans ORS 2060] gi|219951993|gb|ACL62385.1| chromosome segregation protein SMC [Methylobacterium nodulans ORS 2060] Length = 1148 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + I F+ F E + LT + G NG GKS+L EA+ W+ Sbjct: 2 KLTRLRIVGFKTFVEPSEFLIEPGLTGIIGPNGCGKSNLVEALRWV 47 >gi|148652279|ref|YP_001279372.1| SMC domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571363|gb|ABQ93422.1| condensin subunit Smc [Psychrobacter sp. PRwf-1] Length = 1280 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 32/60 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++S F+ F F +T + G NG GKS++ +AI W+ + ++ G ++ Sbjct: 2 RLKSLKLSGFKSFANPTTFSFRHGITAIVGPNGCGKSNVIDAIRWVLGESSAKQLRGGAM 61 >gi|310639249|ref|YP_003944008.1| SMC domain-containing protein [Ketogulonicigenium vulgare Y25] gi|308752825|gb|ADO43969.1| SMC domain-containing protein [Ketogulonicigenium vulgare Y25] Length = 423 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ + ++ RGF + EF H T++ G NG GKSS+ EA+ Sbjct: 2 KIRRLSVAGLRGFDQ-ATFEFDPHFTLLVGVNGVGKSSVLEAL 43 >gi|256848503|ref|ZP_05553945.1| DNA replication and repair protein RecF [Lactobacillus coleohominis 101-4-CHN] gi|256714770|gb|EEU29749.1| DNA replication and repair protein RecF [Lactobacillus coleohominis 101-4-CHN] Length = 374 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++ + HFR + E+ K+ F+ + I+ G+N GK++L EAI L + R Sbjct: 3 LQEMHLKHFRNYDEL-KVVFSPGINILIGENAQGKTNLLEAIHVLALTKSHR 53 >gi|239629037|ref|ZP_04672068.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519183|gb|EEQ59049.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 620 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 36 HFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 H GF ++ Q I F D + +V G+N GKS+L I+ + +G ++R Sbjct: 7 HIDGFGKLHDQDISFQDGMNVVYGKNEAGKSTLHTFIKGMLFGLERQR 54 >gi|315426347|dbj|BAJ47987.1| exonuclease SbcC [Candidatus Caldiarchaeum subterraneum] Length = 758 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +I D LT+ G+NG GKSS+ +AI + YG R ++ + + Sbjct: 17 EISLGDGLTVFIGRNGAGKSSVVDAIVYALYGRHTRGQNANIV 59 >gi|257063722|ref|YP_003143394.1| chromosome segregation protein SMC [Slackia heliotrinireducens DSM 20476] gi|256791375|gb|ACV22045.1| chromosome segregation protein SMC [Slackia heliotrinireducens DSM 20476] Length = 1174 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ F + Q I +T + G NG GKS++S+A+ W+ Sbjct: 11 FKSFADRQVISLEPGITAIVGPNGSGKSNISDAVLWVL 48 >gi|332976627|gb|EGK13468.1| hypothetical protein HMPREF9374_0890 [Desmospora sp. 8437] Length = 530 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 30/52 (57%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 F+ F + ++EF +T V G NG GKS++++ + W+ + + G S++ Sbjct: 11 FKSFADRTELEFTPGVTAVVGPNGSGKSNVTDGMRWVLGEQSAKSLRGASMQ 62 >gi|330444455|ref|YP_004377441.1| DNA replication and repair protein recF [Chlamydophila pecorum E58] gi|328807565|gb|AEB41738.1| DNA replication and repair protein recF [Chlamydophila pecorum E58] Length = 358 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++ + + +FR + + + + FA + ++G N GK++L EA+ L G + R +H Sbjct: 2 KIVSLTLKNFRSYKDTE-VSFAPRVNYISGSNAQGKTNLLEALYILSLGRSFRTQH 56 >gi|320449872|ref|YP_004201968.1| exonuclease SbcC [Thermus scotoductus SA-01] gi|320150041|gb|ADW21419.1| exonuclease SbcC [Thermus scotoductus SA-01] Length = 976 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +E+ F + E Q ++F+D L + G G GKS+L +A+ + YG R Sbjct: 4 LRLELEGFGPYRERQGVDFSDVELFAITGPTGSGKSTLLDAMAFALYGVVPR 55 >gi|55670515|pdb|1W1W|A Chain A, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670516|pdb|1W1W|B Chain B, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670517|pdb|1W1W|C Chain C, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670518|pdb|1W1W|D Chain D, Sc Smc1hd:scc1-C Complex, Atpgs Length = 430 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL 50 >gi|298676000|ref|YP_003727750.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] gi|298288988|gb|ADI74954.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] Length = 1174 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +IE +F+ F + KI F D T ++G NG GKS++ + I Sbjct: 5 EIEFLNFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGI 44 >gi|262037744|ref|ZP_06011186.1| chromosome segregation protein SMC [Leptotrichia goodfellowii F0264] gi|261748216|gb|EEY35613.1| chromosome segregation protein SMC [Leptotrichia goodfellowii F0264] Length = 1176 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +E++ F+ F + +EF +T + G NG GKS++ +AI W+ Sbjct: 6 LELAGFKSFADKTVVEFNRGITSIVGPNGSGKSNILDAILWVL 48 >gi|225550432|ref|ZP_03771381.1| p115 protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379586|gb|EEH01948.1| p115 protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 816 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|161524423|ref|YP_001579435.1| chromosome segregation protein SMC [Burkholderia multivorans ATCC 17616] gi|160341852|gb|ABX14938.1| chromosome segregation protein SMC [Burkholderia multivorans ATCC 17616] Length = 1206 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 38/86 (44%) Query: 3 RLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYG 62 R R + A S ++ +L I+++ F+ F + + L V G NG G Sbjct: 13 RARADSPRAARRCSFHLFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCG 72 Query: 63 KSSLSEAIEWLFYGYTQRRKHGDSIK 88 KS++ +A+ W+ G+S++ Sbjct: 73 KSNIIDAVRWVLGESRASELRGESMQ 98 >gi|84500325|ref|ZP_00998591.1| SMC protein [Oceanicola batsensis HTCC2597] gi|84392259|gb|EAQ04527.1| SMC protein [Oceanicola batsensis HTCC2597] Length = 1151 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLLIHDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|225551566|ref|ZP_03772512.1| p115 protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379381|gb|EEH01746.1| p115 protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 840 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +IF L IE F+ F E EF +T + G NG GKS++ +A++W+ Sbjct: 1 MIF-LKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWV 48 >gi|317046280|ref|YP_004113928.1| SMC domain-containing protein [Pantoea sp. At-9b] gi|316947897|gb|ADU67372.1| SMC domain protein [Pantoea sp. At-9b] Length = 547 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Query: 32 IEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAI----EWLFYGYTQR 80 +E+ +++G + ++KI F HL I G NG GK+S+ E++ WL G R Sbjct: 69 LELVNYKGIRKTVKKITFDPHLNIFVGVNGSGKTSIIESLVKASTWLVNGIRNR 122 >gi|293400483|ref|ZP_06644628.1| hypothetical protein HMPREF0863_00767 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305509|gb|EFE46753.1| hypothetical protein HMPREF0863_00767 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 980 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IE+ F+ F + I F + + G NG GKS++++AI W+ + + G S+ Sbjct: 10 IELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGTSM 65 >gi|223935776|ref|ZP_03627691.1| chromosome segregation protein SMC [bacterium Ellin514] gi|223895377|gb|EEF61823.1| chromosome segregation protein SMC [bacterium Ellin514] Length = 1249 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++ + F+ F + F +T + G NG GKS++S+AI W+ Sbjct: 3 LKNLTVFGFKSFANKTSLNFQPGVTAIVGPNGCGKSNVSDAIRWVL 48 >gi|218697189|ref|YP_002404856.1| hypothetical protein EC55989_3921 [Escherichia coli 55989] gi|218353921|emb|CAV00353.1| conserved hypothetical protein [Escherichia coli 55989] Length = 628 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 30/50 (60%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F Sbjct: 19 LHMRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFF 68 >gi|299134656|ref|ZP_07027848.1| chromosome segregation protein SMC [Afipia sp. 1NLS2] gi|298590466|gb|EFI50669.1| chromosome segregation protein SMC [Afipia sp. 1NLS2] Length = 1154 Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEATDFLIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|288870134|ref|ZP_06409643.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288868252|gb|EFD00551.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 626 Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+LDI I+ F F + + F D L IV G+N GKS++ I + +G ++R Sbjct: 7 MKILDIYINGFGKF-HGRNLSFEDGLNIVYGKNEAGKSTIHTFIRGMLFGIEKQR 60 >gi|260438583|ref|ZP_05792399.1| putative ATP binding protein [Butyrivibrio crossotus DSM 2876] gi|292809174|gb|EFF68379.1| putative ATP binding protein [Butyrivibrio crossotus DSM 2876] Length = 438 Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL +I+I ++R F I+F +++T++ G+NG GK+++ +A+ Sbjct: 2 KLKNIKIENYRCFKR-ADIDFDENITLIVGKNGAGKTAILDAV 43 >gi|167765552|ref|ZP_02437616.1| hypothetical protein CLOSS21_00046 [Clostridium sp. SS2/1] gi|167712737|gb|EDS23316.1| hypothetical protein CLOSS21_00046 [Clostridium sp. SS2/1] Length = 1185 Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVL 48 >gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1785 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 22/32 (68%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 G E Q++EFA +T++ G NG GKS++ E + Sbjct: 16 GDEEAQELEFASPITVIYGNNGSGKSTIIECL 47 >gi|81301059|ref|YP_401267.1| recombination protein F [Synechococcus elongatus PCC 7942] gi|97181064|sp|Q31KY9|RECF_SYNE7 RecName: Full=DNA replication and repair protein recF gi|81169940|gb|ABB58280.1| DNA replication and repair protein RecF [Synechococcus elongatus PCC 7942] Length = 387 Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + HFR + + Q ++F TI+ G+N GK++L EA+E ++ R H S Sbjct: 3 LHSLHLQHFRNYRD-QTVQFQAPKTILLGENAQGKTNLLEAVEL----FSTLRSHRVSRD 57 Query: 89 KRSIKT 94 + ++T Sbjct: 58 RDLVQT 63 >gi|300916212|ref|ZP_07132962.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300416448|gb|EFJ99758.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 608 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F Sbjct: 2 RLRKLKLKNFRGYKNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFF 48 >gi|295101861|emb|CBK99406.1| recF protein [Faecalibacterium prausnitzii L2-6] Length = 373 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ ++R + LT++ G NG GK++L EAI WL G R D+ Sbjct: 2 RLLSLEVENYRNIAS-ASLTPGRELTVICGNNGQGKTNLLEAI-WLLTGGKSFRGGKDA 58 >gi|229493888|ref|ZP_04387660.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus erythropolis SK121] gi|229319165|gb|EEN85014.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus erythropolis SK121] Length = 992 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+S F F + +++F AD L +++G G GK+++ +A+ + YG Sbjct: 2 RLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVAFALYG 54 >gi|167624621|ref|YP_001674915.1| SMC domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354643|gb|ABZ77256.1| SMC domain protein [Shewanella halifaxensis HAW-EB4] Length = 1018 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 30 LDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + +E+S F F Q +FA + L ++NG G GK++L +AI + YG T Sbjct: 4 ITLEMSAFGPFASTQMTDFAALGSNPLFLINGPTGAGKTTLLDAICFALYGKT 56 >gi|56751857|ref|YP_172558.1| recombination protein F [Synechococcus elongatus PCC 6301] gi|81820589|sp|Q5N0Y2|RECF_SYNP6 RecName: Full=DNA replication and repair protein recF gi|56686816|dbj|BAD80038.1| DNA replication and repair protein RecF [Synechococcus elongatus PCC 6301] Length = 387 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + HFR + + Q ++F TI+ G+N GK++L EA+E ++ R H S Sbjct: 3 LHSLHLQHFRNYRD-QTVQFQAPKTILLGENAQGKTNLLEAVEL----FSTLRSHRVSRD 57 Query: 89 KRSIKT 94 + ++T Sbjct: 58 RDLVQT 63 >gi|83951616|ref|ZP_00960348.1| SMC protein [Roseovarius nubinhibens ISM] gi|83836622|gb|EAP75919.1| SMC protein [Roseovarius nubinhibens ISM] Length = 1151 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLIINDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|146276201|ref|YP_001166360.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17025] gi|145554442|gb|ABP69055.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17025] Length = 1170 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 20 LRFTRLRLNGFKSFVDPTDLVIHDGLTGVVGPNGCGKSNLLEALRWV 66 >gi|332687193|ref|YP_004456967.1| DNA double-strand break repair rad50 ATPase [Melissococcus plutonius ATCC 35311] gi|332371202|dbj|BAK22158.1| DNA double-strand break repair rad50 ATPase [Melissococcus plutonius ATCC 35311] Length = 620 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ IEI F G + +KI F ++ +VNG+N GKS++ + I+ + +G+ R K Sbjct: 2 KITAIEIVGF-GKWQQKKINFTENNQLVNGKNEAGKSTIYQFIQTILFGFPARGK 55 >gi|332667919|ref|YP_004450707.1| chromosome segregation protein SMC [Haliscomenobacter hydrossis DSM 1100] gi|332336733|gb|AEE53834.1| chromosome segregation protein SMC [Haliscomenobacter hydrossis DSM 1100] Length = 1185 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +EI F+ F I F + + G NG GKS++ +AI W+ + R D + Sbjct: 2 RLKSLEIKGFKSFANSTVINFGADVIGIVGPNGSGKSNVVDAIRWVLGEQSSRELRLDQM 61 >gi|119356341|ref|YP_910985.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides DSM 266] gi|119353690|gb|ABL64561.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides DSM 266] Length = 1179 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F I+F LT + G NG GK+++ +AI W+ Sbjct: 3 LSKIELFGFKSFAHRVTIKFDKGLTAIVGPNGCGKTNVVDAIRWVL 48 >gi|67920323|ref|ZP_00513843.1| unknown protein [Crocosphaera watsonii WH 8501] gi|67857807|gb|EAM53046.1| unknown protein [Crocosphaera watsonii WH 8501] Length = 700 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KLL I++ +FR F EI + T+++G NG GK++L A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGTTPEIFLASDGKNTTMIHGNNGSGKTTLLNAFTWVLY 53 >gi|317472751|ref|ZP_07932064.1| chromosome segregation protein SMC [Anaerostipes sp. 3_2_56FAA] gi|316899777|gb|EFV21778.1| chromosome segregation protein SMC [Anaerostipes sp. 3_2_56FAA] Length = 1186 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFANKMIFKFDSGITGIVGPNGSGKSNVADAVRWVL 48 >gi|254451492|ref|ZP_05064929.1| chromosome segregation protein SMC [Octadecabacter antarcticus 238] gi|198265898|gb|EDY90168.1| chromosome segregation protein SMC [Octadecabacter antarcticus 238] Length = 1151 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIQDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|254437428|ref|ZP_05050922.1| chromosome segregation protein SMC [Octadecabacter antarcticus 307] gi|198252874|gb|EDY77188.1| chromosome segregation protein SMC [Octadecabacter antarcticus 307] Length = 1151 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLIIQDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|14488688|pdb|1II8|A Chain A, Crystal Structure Of The P. Furiosus Rad50 Atpase Domain Length = 195 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 2 KLERVTVKNFRSHSDTV-VEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|291559018|emb|CBL37818.1| condensin subunit Smc [butyrate-producing bacterium SSC/2] Length = 1185 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVL 48 >gi|289423975|ref|ZP_06425767.1| chromosome segregation protein SMC [Peptostreptococcus anaerobius 653-L] gi|289155611|gb|EFD04284.1| chromosome segregation protein SMC [Peptostreptococcus anaerobius 653-L] Length = 1182 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ F+ F I F +T + G NG GKS++S+A+ W+ Sbjct: 3 LKKLELKGFKSFPMKTDIFFDKGVTAIVGPNGSGKSNISDAVRWVL 48 >gi|268323972|emb|CBH37560.1| hypothetical protein containing RecF/RecN/SMC N terminal domain [uncultured archaeon] Length = 920 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + ++R + + +E D + + G NG GK++L E+I W+ +G+ R + IK Sbjct: 3 LKTLTLRNYRKYKNVN-VEIPDGVIGIIGLNGVGKTTLIESIGWVLFGHHAARTTKELIK 61 Query: 89 K 89 + Sbjct: 62 R 62 >gi|258542169|ref|YP_003187602.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01] gi|256633247|dbj|BAH99222.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01] gi|256636306|dbj|BAI02275.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-03] gi|256639359|dbj|BAI05321.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-07] gi|256642415|dbj|BAI08370.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-22] gi|256645470|dbj|BAI11418.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-26] gi|256648523|dbj|BAI14464.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-32] gi|256651576|dbj|BAI17510.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654567|dbj|BAI20494.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-12] Length = 1515 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + + I F+ F + +E LT + G NG GKS++ EA+ W+ + R G Sbjct: 1 MTVRFVRLRIVGFKSFADPVTVEILPGLTGIVGPNGCGKSNVVEALRWVMGESSARSLRG 60 >gi|167745646|ref|ZP_02417773.1| hypothetical protein ANACAC_00338 [Anaerostipes caccae DSM 14662] gi|167654958|gb|EDR99087.1| hypothetical protein ANACAC_00338 [Anaerostipes caccae DSM 14662] Length = 1186 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 3 LKSIEVNGFKSFANKMIFKFDSGITGIVGPNGSGKSNVADAVRWVL 48 >gi|284052082|ref|ZP_06382292.1| SMC domain-containing protein [Arthrospira platensis str. Paraca] gi|78773867|gb|ABB51217.1| ATP-binding protein [Arthrospira platensis] Length = 402 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++S+FRGF E + EF + ++ G NG GKSS+ +A+ F Sbjct: 6 LKLSNFRGF-EQAEFEFQPGMNLIVGINGVGKSSVLDALRIAF 47 >gi|327463824|gb|EGF10140.1| recombination protein F [Streptococcus sanguinis SK1057] Length = 364 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|302336538|ref|YP_003801745.1| DNA replication and repair protein RecF [Olsenella uli DSM 7084] gi|301320378|gb|ADK68865.1| DNA replication and repair protein RecF [Olsenella uli DSM 7084] Length = 362 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++R F E + I AD +T+++G+N GK++ EA++ L G++ R Sbjct: 10 LRNWRNFDE-RNIALADGMTVLHGRNAAGKTNAIEALQMLTAGFSFR 55 >gi|294678934|ref|YP_003579549.1| chromosome partition protein Smc [Rhodobacter capsulatus SB 1003] gi|294477754|gb|ADE87142.1| chromosome partition protein Smc [Rhodobacter capsulatus SB 1003] Length = 1152 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLNGFKSFVDPTDLVIHDGLTGVVGPNGCGKSNLLEALRWV 47 >gi|294496457|ref|YP_003542950.1| condensin subunit Smc [Methanohalophilus mahii DSM 5219] gi|292667456|gb|ADE37305.1| condensin subunit Smc [Methanohalophilus mahii DSM 5219] Length = 1173 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 24/39 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 IE +F+ F + KI F D T ++G NG GKS++ + I Sbjct: 6 IEFMNFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGI 44 >gi|300362675|ref|ZP_07058851.1| recombination protein F [Lactobacillus gasseri JV-V03] gi|300353666|gb|EFJ69538.1| recombination protein F [Lactobacillus gasseri JV-V03] Length = 374 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + E+ FR F E+ K F H+ I G N GK++L EAI +L + R Sbjct: 3 LANFELKDFRNFKEL-KTNFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHR 53 >gi|209523386|ref|ZP_03271941.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496128|gb|EDZ96428.1| SMC domain protein [Arthrospira maxima CS-328] Length = 403 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++I++FRGF E + EF + ++ G NG GKSS+ +A+ F Sbjct: 6 LKITNFRGF-EQAEFEFQPGMNLIVGINGVGKSSVLDALRIAF 47 >gi|152984252|ref|YP_001347744.1| hypothetical protein PSPA7_2377 [Pseudomonas aeruginosa PA7] gi|150959410|gb|ABR81435.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 581 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ +EI++F+G ++ + + +V G NG GKSSL +AI F G +R Sbjct: 2 RITKLEITNFQGLRH-AALDVSAPVLLVAGHNGAGKSSLLDAIAMAFNGQPRR 53 >gi|254252052|ref|ZP_04945370.1| SMC protein [Burkholderia dolosa AUO158] gi|124894661|gb|EAY68541.1| SMC protein [Burkholderia dolosa AUO158] Length = 1190 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 36/78 (46%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A + +++ +L I+++ F+ F + + L V G NG GKS++ +A+ Sbjct: 5 ASRRRPFHTFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAV 64 Query: 71 EWLFYGYTQRRKHGDSIK 88 W+ G+S++ Sbjct: 65 RWVLGESRASELRGESMQ 82 >gi|332364154|gb|EGJ41931.1| recombination protein F [Streptococcus sanguinis SK49] Length = 364 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|257454406|ref|ZP_05619668.1| SMC domain protein [Enhydrobacter aerosaccus SK60] gi|257448172|gb|EEV23153.1| SMC domain protein [Enhydrobacter aerosaccus SK60] Length = 1215 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G ++ Sbjct: 2 RLKQLKLAGFKSFANPTTFHFPKTITAIVGPNGCGKSNVIDAIRWVLGESSAKQLRGGAM 61 >gi|22297672|ref|NP_680919.1| hypothetical protein tll0128 [Thermosynechococcus elongatus BP-1] gi|22293849|dbj|BAC07681.1| tll0128 [Thermosynechococcus elongatus BP-1] Length = 920 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + EF + ++ G+NG GK+SL EAI W+ + R +G K I+ Sbjct: 17 RTFEFMPGVNVICGENGAGKTSLFEAIAWVL--FDARSGYGSGFHKAIIR 64 >gi|117923321|ref|YP_863938.1| DNA replication and repair protein RecF [Magnetococcus sp. MC-1] gi|259563664|sp|A0L3I9|RECF_MAGSM RecName: Full=DNA replication and repair protein recF gi|117607077|gb|ABK42532.1| DNA replication and repair protein RecF [Magnetococcus sp. MC-1] Length = 382 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + FR TE + + F L ++ G NG+GKS+L EAI L G Sbjct: 6 LTLRDFRNITEAE-LRFGPGLNLITGPNGHGKSNLLEAIGLLATG 49 >gi|307726822|ref|YP_003910035.1| ATP-dependent OLD family endonuclease [Burkholderia sp. CCGE1003] gi|307587347|gb|ADN60744.1| ATP-dependent OLD family endonuclease [Burkholderia sp. CCGE1003] Length = 634 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR ++ I F D +T G NG GKS++ A++W F G Sbjct: 2 KIQSVRIRNFRALRDV-TIPF-DSVTTFIGPNGAGKSTVLRALDWYFNG 48 >gi|268316211|ref|YP_003289930.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] gi|262333745|gb|ACY47542.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] Length = 1185 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +E+ F+ F + + F +T + G NG GKS+L +A+ W+ Sbjct: 3 LSKLELQGFKSFADRTVLHFDPGITAIVGPNGCGKSNLVDAVRWV 47 >gi|253689247|ref|YP_003018437.1| hypothetical protein PC1_2874 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755825|gb|ACT13901.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 555 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL+ + +++FR F E Q I+FA +T++ G N GK+++ A+ +L Sbjct: 2 KLIKLVLTNFRSFKETQVIQFAP-VTLLFGPNSVGKTTILMALFYL 46 >gi|330898171|gb|EGH29590.1| hypothetical protein PSYJA_11650 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 850 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 25/39 (64%) Query: 35 SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 S F+ K++ A +T+V G+NG GKSSL +A++ L Sbjct: 86 SEFKKLRPTLKLDLAKRITLVFGRNGAGKSSLCQALKVL 124 >gi|330830982|ref|YP_004393934.1| ribosome small subunit-dependent GTPase A [Aeromonas veronii B565] gi|328806118|gb|AEB51317.1| Ribosome small subunit-dependent GTPase A [Aeromonas veronii B565] Length = 344 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A + L +Y RKL +++L + G E+ K + D ++I GQ+G GKSSL+ A+ Sbjct: 168 ARIESQLETY--RKLNYEVLLVSCESGEGLDEL-KAKLTDKISIFVGQSGVGKSSLTNAL 224 >gi|222475581|ref|YP_002563998.1| RECF protein (recF) [Anaplasma marginale str. Florida] gi|222419719|gb|ACM49742.1| RECF protein (recF) [Anaplasma marginale str. Florida] Length = 371 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I++ +FR +T + +E H ++ G+NG GK+++ EAI L G R ++ R Sbjct: 12 IKLCNFRNYTRAE-LESHGHSVVLLGENGSGKTNILEAISLLSKGPGLRNVSAACMQNRE 70 Query: 92 IKTPMPMCMAV 102 P + AV Sbjct: 71 SSAPWSVHHAV 81 >gi|158291930|ref|XP_313457.3| AGAP003676-PA [Anopheles gambiae str. PEST] gi|157017524|gb|EAA08790.3| AGAP003676-PA [Anopheles gambiae str. PEST] Length = 1294 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 7/51 (13%) Query: 32 IEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +EI R F ++Q+I F LT++ GQNG GK+++ IE L YG T Sbjct: 7 LEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTI---IECLKYGLT 54 >gi|56417217|ref|YP_154291.1| recombination protein F [Anaplasma marginale str. St. Maries] gi|56388449|gb|AAV87036.1| RECF protein [Anaplasma marginale str. St. Maries] Length = 371 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 I++ +FR +T + +E H ++ G+NG GK+++ EAI L G R ++ R Sbjct: 12 IKLCNFRNYTRAE-LESHGHSVVLLGENGSGKTNILEAISLLSKGPGLRNVSAACMQNRE 70 Query: 92 IKTPMPMCMAV 102 P + AV Sbjct: 71 SSAPWSVHHAV 81 >gi|254247877|ref|ZP_04941198.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gi|124872653|gb|EAY64369.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] Length = 1218 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 35/74 (47%) Query: 15 KSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +++ +L I+++ F+ F + + L V G NG GKS++ +A+ W+ Sbjct: 4 RPFHTFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVL 63 Query: 75 YGYTQRRKHGDSIK 88 G+S++ Sbjct: 64 GESRASELRGESMQ 77 >gi|73662265|ref|YP_301046.1| hypothetical protein SSP0956 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494780|dbj|BAE18101.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 977 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ +EI + F E +KIEF + T + G+N GKS++ I + +G+ ++++ + Sbjct: 2 KIKSLEIYGYGRFIE-RKIEFDESFTQIYGENETGKSTIQAFIHSILFGFPTKKENEPRL 60 Query: 88 KKR 90 + R Sbjct: 61 EPR 63 >gi|186684598|ref|YP_001867794.1| hypothetical protein Npun_F4484 [Nostoc punctiforme PCC 73102] gi|186467050|gb|ACC82851.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 690 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 28 KLLDIEISHFRGF--TEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I++ +FR F T + I A + TI++G NG GK+SL A W+ Y Sbjct: 2 KLTSIKLCNFRSFYGTTPEMIIAGGDAQNTTIIHGNNGSGKTSLLNAFTWVLY 54 >gi|317498508|ref|ZP_07956802.1| RecF/RecN/SMC N terminal domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894201|gb|EFV16389.1| RecF/RecN/SMC N terminal domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 469 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE++ F+ F +F +T + G NG GKS++++A+ W+ Sbjct: 5 LKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVL 50 >gi|313897414|ref|ZP_07830957.1| chromosome segregation protein SMC [Clostridium sp. HGF2] gi|312957784|gb|EFR39409.1| chromosome segregation protein SMC [Clostridium sp. HGF2] Length = 976 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IE+ F+ F + I F + + G NG GKS++++AI W+ Sbjct: 6 IELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVL 48 >gi|13541058|ref|NP_110746.1| chromosome segregation protein [Thermoplasma volcanium GSS1] gi|18202324|sp|P58302|RAD50_THEVO RecName: Full=DNA double-strand break repair rad50 ATPase gi|14324442|dbj|BAB59370.1| purine NTPase [Thermoplasma volcanium GSS1] Length = 895 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 I F + ++ GQNG GKSS+ +AI + + + R+ D IKK Sbjct: 19 IYFDTGINMIIGQNGAGKSSIVDAIRFALFSDKRTRRTEDMIKK 62 >gi|260890885|ref|ZP_05902148.1| RECF protein [Leptotrichia hofstadii F0254] gi|260859438|gb|EEX73938.1| RECF protein [Leptotrichia hofstadii F0254] Length = 324 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 K++F + ++ G+NG GK+SL EA+ +L G + R K I+K ++ Sbjct: 4 KLKFDRYFNLIYGKNGQGKTSLIEAVHFLATGKSFRTKKVKEIRKYNL 51 >gi|237715297|ref|ZP_04545778.1| ATP binding protein [Bacteroides sp. D1] gi|262405139|ref|ZP_06081689.1| ATP binding protein [Bacteroides sp. 2_1_22] gi|294645436|ref|ZP_06723140.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294807068|ref|ZP_06765887.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229444606|gb|EEO50397.1| ATP binding protein [Bacteroides sp. D1] gi|262356014|gb|EEZ05104.1| ATP binding protein [Bacteroides sp. 2_1_22] gi|292639239|gb|EFF57553.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294445767|gb|EFG14415.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 449 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I+I +FRGF E + EF + +V G N GK++L A++ Y Q Sbjct: 6 IKIKNFRGF-EDKSFEFDSRMNVVLGNNTTGKTTLLHAVQIALGAYLQ 52 >gi|159899978|ref|YP_001546225.1| cellulose-binding family II protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893017|gb|ABX06097.1| cellulose-binding family II [Herpetosiphon aurantiacus ATCC 23779] Length = 486 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Query: 48 FADHLTIVNGQNG---YGKSSLSEAIEWLFYGYTQRRKH 83 +ADHLTI NGQ+G S + W +GYT ++H Sbjct: 312 WADHLTITNGQDGNFDINNGSDFITVSWSKFGYTTNKEH 350 >gi|327467748|gb|EGF13242.1| recombination protein F [Streptococcus sanguinis SK330] Length = 364 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|294340193|emb|CAZ88565.1| putative Structural maintenance of chromosome protein SMC [Thiomonas sp. 3As] Length = 1177 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ F+ F E + F ++ + G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSLRLAGFKSFAEPVTLPFPGRISGIVGPNGCGKSNVIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|296135972|ref|YP_003643214.1| chromosome segregation protein SMC [Thiomonas intermedia K12] gi|295796094|gb|ADG30884.1| chromosome segregation protein SMC [Thiomonas intermedia K12] Length = 1177 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ F+ F E + F ++ + G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTSLRLAGFKSFAEPVTLPFPGRISGIVGPNGCGKSNVIDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|28375555|emb|CAD66601.1| SMC protein [Methylococcus capsulatus] Length = 1169 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++I+ F+ F + + +L V G NG GKS++ +A+ W+ + R G+++ Sbjct: 2 RLEKLKIAGFKSFVDPTTLPLPGNLVGVVGPNGCGKSNVIDAVRWVMGESSARHLRGETM 61 >gi|327200667|pdb|3QKR|A Chain A, Mre11 Rad50 Binding Domain Bound To Rad50 gi|327200670|pdb|3QKS|A Chain A, Mre11 Rad50 Binding Domain Bound To Rad50 Length = 203 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSDTV-VEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|325698042|gb|EGD39923.1| recombination protein F [Streptococcus sanguinis SK160] Length = 364 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|325689344|gb|EGD31350.1| recombination protein F [Streptococcus sanguinis SK115] Length = 364 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|300864424|ref|ZP_07109295.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337568|emb|CBN54443.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 688 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query: 28 KLLDIEISHFRGF-TEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I++ +FR F + +I FA + T+++G NG GK++L A W+ Y Sbjct: 2 KLNSIKLYNFRQFYGKTPEITFASGTRNTTMIHGNNGSGKTTLMNAFTWVLY 53 >gi|313201134|ref|YP_004039792.1| chromosome segregation protein smc [Methylovorus sp. MP688] gi|312440450|gb|ADQ84556.1| chromosome segregation protein SMC [Methylovorus sp. MP688] Length = 1173 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++++ F+ F + + V G NG GKS++ E+I W+ + + GDS+ Sbjct: 2 RLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESIRWVLGESSAKEMRGDSM 61 >gi|302392479|ref|YP_003828299.1| DNA repair protein RecN [Acetohalobium arabaticum DSM 5501] gi|302204556|gb|ADL13234.1| DNA repair protein RecN [Acetohalobium arabaticum DSM 5501] Length = 581 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL++ I +F E+Q I+F +L I+ G+ G GKS + +A++ L G Sbjct: 2 LLNLSIYNFALIEELQ-IDFTGNLNIITGETGAGKSIIVKALQMLLGG 48 >gi|229513308|ref|ZP_04402773.1| exonuclease SbcC [Vibrio cholerae TMA 21] gi|229349718|gb|EEO14673.1| exonuclease SbcC [Vibrio cholerae TMA 21] Length = 1013 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHG 84 KL+ F G EI E D L ++NG G GKSS+ +AI + YG T + G Sbjct: 4 LKLMLQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTG 63 Query: 85 DSIK 88 D ++ Sbjct: 64 DQMR 67 >gi|221058216|ref|XP_002261616.1| DNA repair protein RAD50 [Plasmodium knowlesi strain H] gi|194247621|emb|CAQ41021.1| DNA repair protein RAD50, putative [Plasmodium knowlesi strain H] Length = 1804 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 22/32 (68%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 G E Q++EFA +T++ G NG GKS++ E + Sbjct: 16 GDEEAQELEFASPITVIYGNNGSGKSTIIECL 47 >gi|329113341|ref|ZP_08242122.1| Hypothetical protein APO_0105 [Acetobacter pomorum DM001] gi|326697166|gb|EGE48826.1| Hypothetical protein APO_0105 [Acetobacter pomorum DM001] Length = 1515 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + + I F+ F + +E LT + G NG GKS++ EA+ W+ + R G Sbjct: 1 MTVRFVRLRIVGFKSFADPVTVEILPGLTGIVGPNGCGKSNVVEALRWVMGESSARSLRG 60 >gi|291518141|emb|CBK73362.1| hypothetical protein CIY_04150 [Butyrivibrio fibrisolvens 16/4] Length = 666 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K++ I+HF E K F D V +NG+GK++ S I+ +FYG Sbjct: 2 KIVSCYIAHFGKINEF-KFNFEDGFNSVLQENGWGKTTFSVFIKAMFYG 49 >gi|325981744|ref|YP_004294146.1| chromosome segregation protein SMC [Nitrosomonas sp. AL212] gi|325531263|gb|ADZ25984.1| chromosome segregation protein SMC [Nitrosomonas sp. AL212] Length = 1183 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E + + L + G NG GKS++ +A+ W+ GDS+ Sbjct: 2 RLAYIKLAGFKSFAEPTTVPISHDLVGIVGPNGCGKSNVIDAVRWVLGESKASALRGDSM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|301025526|ref|ZP_07189056.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|299880064|gb|EFI88275.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 548 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F Sbjct: 2 RLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFF 48 >gi|170766770|ref|ZP_02901223.1| ATP/GTP-binding protein [Escherichia albertii TW07627] gi|170124208|gb|EDS93139.1| ATP/GTP-binding protein [Escherichia albertii TW07627] Length = 397 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F Sbjct: 2 RLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFF 48 >gi|38347960|ref|NP_941209.1| ATP/GTP-binding protein [Serratia marcescens] gi|157412119|ref|YP_001481460.1| ATP/GTP-binding protein [Escherichia coli APEC O1] gi|238910390|ref|ZP_04654227.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|296105228|ref|YP_003615374.1| hypothetical protein ECL_04901 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|38259437|emb|CAE51665.1| ATP/GTP-binding protein [Serratia marcescens] gi|99867144|gb|ABF67789.1| ATP/GTP-binding protein [Escherichia coli APEC O1] gi|295059687|gb|ADF64425.1| hypothetical protein ECL_04901 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|322614025|gb|EFY10961.1| hypothetical protein SEEM315_05513 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617917|gb|EFY14810.1| hypothetical protein SEEM971_14352 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625469|gb|EFY22295.1| hypothetical protein SEEM973_11125 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629934|gb|EFY26707.1| hypothetical protein SEEM974_18640 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632177|gb|EFY28928.1| hypothetical protein SEEM201_00619 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636472|gb|EFY33179.1| hypothetical protein SEEM202_12061 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322651304|gb|EFY47688.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652781|gb|EFY49120.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659083|gb|EFY55335.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663215|gb|EFY59419.1| hypothetical protein SEEM801_21632 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668702|gb|EFY64855.1| hypothetical protein SEEM507_12264 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674494|gb|EFY70587.1| hypothetical protein SEEM877_18241 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678300|gb|EFY74361.1| hypothetical protein SEEM867_21154 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682443|gb|EFY78464.1| hypothetical protein SEEM180_21589 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684156|gb|EFY80162.1| hypothetical protein SEEM600_11817 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192288|gb|EFZ77520.1| hypothetical protein SEEM581_18817 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196285|gb|EFZ81437.1| hypothetical protein SEEM501_13820 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201433|gb|EFZ86499.1| hypothetical protein SEEM460_09751 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206457|gb|EFZ91418.1| hypothetical protein SEEM020_01670 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212049|gb|EFZ96876.1| hypothetical protein SEEM6152_17804 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216954|gb|EGA01677.1| hypothetical protein SEEM0077_14821 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323224368|gb|EGA08657.1| hypothetical protein SEEM0055_16609 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228296|gb|EGA12427.1| hypothetical protein SEEM0052_07417 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233436|gb|EGA17529.1| hypothetical protein SEEM3312_16404 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237102|gb|EGA21169.1| hypothetical protein SEEM5258_14422 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243683|gb|EGA27699.1| hypothetical protein SEEM1156_06828 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246075|gb|EGA30062.1| hypothetical protein SEEM9199_17932 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250851|gb|EGA34729.1| hypothetical protein SEEM8282_20509 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257652|gb|EGA41338.1| hypothetical protein SEEM8283_13285 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261862|gb|EGA45429.1| hypothetical protein SEEM8284_05562 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266082|gb|EGA49573.1| hypothetical protein SEEM8285_00020 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268626|gb|EGA52093.1| hypothetical protein SEEM8287_06807 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323974955|gb|EGB70065.1| 6 ATP/GTP-binding protein [Escherichia coli TW10509] Length = 608 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F Sbjct: 2 RLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFF 48 >gi|322691439|ref|YP_004221009.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. longum JCM 1217] gi|320456295|dbj|BAJ66917.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. longum JCM 1217] Length = 1225 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S++ Sbjct: 3 LKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSME 62 >gi|317483516|ref|ZP_07942501.1| chromosome segregation protein SMC [Bifidobacterium sp. 12_1_47BFAA] gi|316915040|gb|EFV36477.1| chromosome segregation protein SMC [Bifidobacterium sp. 12_1_47BFAA] Length = 1225 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S++ Sbjct: 3 LKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSME 62 >gi|297184290|gb|ADI20407.1| recombinational DNA repair ATPase (recf pathway) [uncultured alpha proteobacterium EB080_L43F08] Length = 364 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +++ISHFR + ++ + + + G NG GK+++ EA+ L G RR D ++++ Sbjct: 8 NLKISHFRSYKNVEILTSGCPVALF-GSNGAGKTNILEALSLLSPGRGLRRSRVDEMERK 66 >gi|291543408|emb|CBL16517.1| recF protein [Ruminococcus sp. 18P13] Length = 370 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +E HFR IQ +E ++ GQN GK++L EAI WL G Sbjct: 3 LTGLEAEHFRNLEHIQ-LEPDPRYNLIVGQNAQGKTNLLEAI-WLLTG 48 >gi|316935990|ref|YP_004110972.1| chromosome segregation protein SMC [Rhodopseudomonas palustris DX-1] gi|315603704|gb|ADU46239.1| chromosome segregation protein SMC [Rhodopseudomonas palustris DX-1] Length = 1154 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|239502688|ref|ZP_04661998.1| RecF/RecN/SMC domain-containing protein [Acinetobacter baumannii AB900] Length = 646 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 19/35 (54%) Query: 59 NGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 NG GKSSL + I W YG T R GD + + K Sbjct: 42 NGAGKSSLVDGICWALYGTTARDVTGDDVVNETAK 76 >gi|227547590|ref|ZP_03977639.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211845|gb|EEI79741.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 1225 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S++ Sbjct: 3 LKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSME 62 >gi|239621193|ref|ZP_04664224.1| condensin subunit Smc [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515654|gb|EEQ55521.1| condensin subunit Smc [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 1225 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S++ Sbjct: 3 LKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSME 62 >gi|192293342|ref|YP_001993947.1| chromosome segregation protein SMC [Rhodopseudomonas palustris TIE-1] gi|192287091|gb|ACF03472.1| chromosome segregation protein SMC [Rhodopseudomonas palustris TIE-1] Length = 1154 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|153825831|ref|ZP_01978498.1| nuclease sbcCD subunit C [Vibrio cholerae MZO-2] gi|149740431|gb|EDM54554.1| nuclease sbcCD subunit C [Vibrio cholerae MZO-2] Length = 1013 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHG 84 KL+ F G EI E D L ++NG G GKSS+ +AI + YG T + G Sbjct: 4 LKLMLQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTG 63 Query: 85 DSIK 88 D ++ Sbjct: 64 DQMR 67 >gi|114769642|ref|ZP_01447252.1| recombination protein F [alpha proteobacterium HTCC2255] gi|114549347|gb|EAU52229.1| recombination protein F [alpha proteobacterium HTCC2255] Length = 364 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +++ISHFR + ++ + + + G NG GK+++ EA+ L G RR D ++++ Sbjct: 8 NLKISHFRSYKNVEILTSGCPVALF-GSNGAGKTNILEALSLLSPGRGLRRSRVDEMERK 66 >gi|86748191|ref|YP_484687.1| chromosome segregation protein SMC [Rhodopseudomonas palustris HaA2] gi|86571219|gb|ABD05776.1| condensin subunit Smc [Rhodopseudomonas palustris HaA2] Length = 1154 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|39937549|ref|NP_949825.1| chromosome segregation protein SMC [Rhodopseudomonas palustris CGA009] gi|39651408|emb|CAE29930.1| putative chromosome segregation SMC protein [Rhodopseudomonas palustris CGA009] Length = 1177 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 25 KLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRW 69 >gi|16081317|ref|NP_393635.1| chromosome segregation protein [Thermoplasma acidophilum DSM 1728] gi|18202976|sp|Q9HLR8|RAD50_THEAC RecName: Full=DNA double-strand break repair rad50 ATPase gi|10639302|emb|CAC11304.1| myosin heavy chain (mhcA) related protein [Thermoplasma acidophilum] Length = 896 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK--RSIKTPM 96 E +I F + I+ G NG GKSS+ +AI + +G + +K D I+K +S++ M Sbjct: 15 EDSEIFFDTGVNIIVGHNGAGKSSIIDAIRFALFGDKRTKKIEDMIRKGAKSLEVEM 71 >gi|91975674|ref|YP_568333.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisB5] gi|91682130|gb|ABE38432.1| condensin subunit Smc [Rhodopseudomonas palustris BisB5] Length = 1154 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|332363594|gb|EGJ41375.1| recombination protein F [Streptococcus sanguinis SK1059] Length = 364 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|331270253|ref|YP_004396745.1| DNA sulfur modification protein DndD [Clostridium botulinum BKT015925] gi|329126803|gb|AEB76748.1| DNA sulfur modification protein DndD [Clostridium botulinum BKT015925] Length = 719 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Query: 32 IEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 I + +FR + + F ++T++ G+NG GKS+L EAI+ YG T Sbjct: 6 ITLKNFRSYEDETTFSFTPKDNKNITLIGGENGAGKSTLFEAIKLCIYGPT 56 >gi|301063005|ref|ZP_07203570.1| chromosome segregation protein SMC [delta proteobacterium NaphS2] gi|300442886|gb|EFK07086.1| chromosome segregation protein SMC [delta proteobacterium NaphS2] Length = 1192 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 26/45 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 K+ I + F+ F E +I F ++ V G NG GKS++ +AI W Sbjct: 2 KIKQISVHGFKSFMERLEITFPTGISGVVGPNGCGKSNVVDAIRW 46 >gi|260584260|ref|ZP_05852007.1| DNA replication and repair protein RecF [Granulicatella elegans ATCC 700633] gi|260157778|gb|EEW92847.1| DNA replication and repair protein RecF [Granulicatella elegans ATCC 700633] Length = 369 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L++++++HFR + E+ +EF + I G+N GK++L E+I L + R Sbjct: 2 RLVELQLNHFRNYEEL-FLEFGKGVHIFIGENAQGKTNLMESIYTLAMTKSHR 53 >gi|239825588|ref|YP_002948212.1| recombination protein F [Geobacillus sp. WCH70] gi|259563662|sp|C5D330|RECF_GEOSW RecName: Full=DNA replication and repair protein recF gi|239805881|gb|ACS22946.1| DNA replication and repair protein RecF [Geobacillus sp. WCH70] Length = 374 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + + ++R + E + IEFA+++ I+ G+N GK+++ EAI L + R Sbjct: 3 LTHLSLKNYRNY-ESETIEFANNVNIILGENAQGKTNMMEAIYVLAMAKSHR 53 >gi|86607139|ref|YP_475902.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555681|gb|ABD00639.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. JA-3-3Ab] Length = 1198 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++L + + +F+ E EF + + G+NG GK+S+ EAI W+ + Y Sbjct: 2 RILSLALQNFKSH-EDAFFEFEPGINAICGENGAGKTSILEAIAWVLFDY 50 >gi|332365084|gb|EGJ42849.1| recombination protein F [Streptococcus sanguinis SK355] Length = 364 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|325695750|gb|EGD37649.1| recombination protein F [Streptococcus sanguinis SK150] gi|328945164|gb|EGG39319.1| recombination protein F [Streptococcus sanguinis SK1087] Length = 364 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|325686466|gb|EGD28495.1| recombination protein F [Streptococcus sanguinis SK72] Length = 364 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 3 LQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTR 55 >gi|291295935|ref|YP_003507333.1| SMC domain-containing protein [Meiothermus ruber DSM 1279] gi|290470894|gb|ADD28313.1| SMC domain protein [Meiothermus ruber DSM 1279] Length = 1074 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F+ F E +EF + + G NG GKS+L EA+ W+ G + GD Sbjct: 11 FKSFGERTSLEFGPGVYGIVGPNGSGKSNLVEALRWVV-GARAKELRGD 58 >gi|226951285|ref|ZP_03821749.1| possible RecF/RecN/SMC N domain protein [Acinetobacter sp. ATCC 27244] gi|226837969|gb|EEH70352.1| possible RecF/RecN/SMC N domain protein [Acinetobacter sp. ATCC 27244] Length = 351 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I+ +R F+E+ +I F L ++ G+NG GK+++ + LF Sbjct: 6 LSITGYRCFSELFEINFRKGLNVIVGENGAGKTAIINSFRQLF 48 >gi|296125983|ref|YP_003633235.1| DNA replication and repair protein RecF [Brachyspira murdochii DSM 12563] gi|296017799|gb|ADG71036.1| DNA replication and repair protein RecF [Brachyspira murdochii DSM 12563] Length = 355 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++ I FR + E EF+D + ++ G NG GK+++ EA+ L G + R Sbjct: 3 LKELTIRSFRNYNE-NVFEFSDKINVLYGHNGCGKTNILEAVYMLGNGVSFR 53 >gi|172051565|emb|CAQ34961.1| hypothetical protein [Photobacterium damselae subsp. piscicida] Length = 883 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAF 304 >gi|153821462|ref|ZP_01974129.1| ATPases involved in DNA repair [Vibrio cholerae B33] gi|229509121|ref|ZP_04398608.1| hypothetical protein VCE_000523 [Vibrio cholerae B33] gi|229608793|ref|YP_002879441.1| hypothetical protein VCD_003715 [Vibrio cholerae MJ-1236] gi|126521062|gb|EAZ78285.1| ATPases involved in DNA repair [Vibrio cholerae B33] gi|229353878|gb|EEO18813.1| hypothetical protein VCE_000523 [Vibrio cholerae B33] gi|229371448|gb|ACQ61871.1| hypothetical protein VCD_003715 [Vibrio cholerae MJ-1236] Length = 883 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAF 304 >gi|21885316|gb|AAL59722.1| unknown [Vibrio cholerae] Length = 896 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 282 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAF 317 >gi|20095134|gb|AAM08000.1| hypothetical protein [Providencia rettgeri] gi|262318146|dbj|BAI48472.1| hypothetical protein [Proteus mirabilis] Length = 883 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAF 304 >gi|254850934|ref|ZP_05240284.1| ATPase [Vibrio cholerae MO10] gi|254846639|gb|EET25053.1| ATPase [Vibrio cholerae MO10] gi|259156296|gb|ACV96242.1| DNA repair ATPase [Vibrio cholerae Ind4] Length = 883 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAF 304 >gi|229825032|ref|ZP_04451101.1| hypothetical protein GCWU000182_00382 [Abiotrophia defectiva ATCC 49176] gi|229790779|gb|EEP26893.1| hypothetical protein GCWU000182_00382 [Abiotrophia defectiva ATCC 49176] Length = 1186 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI F+ F F +T + G NG GKS++++A+ W+ + ++ G ++ Sbjct: 3 LKSVEIQGFKSFANKIVFSFEGGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSKME 62 >gi|78484349|ref|YP_390274.1| DNA replication and repair protein RecF [Thiomicrospira crunogena XCL-2] gi|123556168|sp|Q31JS3|RECF_THICR RecName: Full=DNA replication and repair protein recF gi|78362635|gb|ABB40600.1| DNA replication and repair protein RecF [Thiomicrospira crunogena XCL-2] Length = 362 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L ++ HFR E + F + L ++ G N GK++L EAI L G + R Sbjct: 3 KILQFQLQHFRNI-EQASLTFGEGLNLIVGDNAAGKTALIEAIWTLASGRSFR 54 >gi|294496455|ref|YP_003542948.1| SMC domain protein [Methanohalophilus mahii DSM 5219] gi|292667454|gb|ADE37303.1| SMC domain protein [Methanohalophilus mahii DSM 5219] Length = 889 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 28/38 (73%), Gaps = 1/38 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 +++ + R + +++ I+F D +T+V+G NG GKSSL EA Sbjct: 6 LKVKNIRSYNDLE-IDFNDGVTVVSGVNGSGKSSLLEA 42 >gi|293374934|ref|ZP_06621231.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sanguinis PC909] gi|325837691|ref|ZP_08166497.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sp. HGF1] gi|292646453|gb|EFF64466.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sanguinis PC909] gi|325490872|gb|EGC93172.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sp. HGF1] Length = 248 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 D + H + ++ ++ F ++T G+NG GKS+L EAI + YG++ Sbjct: 19 DSYVRHIKALNQLNQLSFNHNITFFVGENGSGKSTLIEAIA-VAYGFS 65 >gi|239830849|ref|ZP_04679178.1| DNA replication and repair protein RecF [Ochrobactrum intermedium LMG 3301] gi|239823116|gb|EEQ94684.1| DNA replication and repair protein RecF [Ochrobactrum intermedium LMG 3301] Length = 384 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +++ +FR + E+ H+ ++ G+NG GK++L EA+ +L G RR D + + S Sbjct: 19 LKLVNFRNYAELSLPLGPGHV-VLTGENGSGKTNLIEAVSFLSPGRGLRRAAYDDVARTS 77 >gi|262196886|ref|YP_003268095.1| chromosome segregation protein SMC [Haliangium ochraceum DSM 14365] gi|262080233|gb|ACY16202.1| chromosome segregation protein SMC [Haliangium ochraceum DSM 14365] Length = 1403 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 IEI F+ F + + + +T V G NG GKS++ +AI W + R G ++ Sbjct: 6 IEIIGFKSFCDRTVLNISSPVTSVVGPNGCGKSNIVDAIRWSMGEQSARHLRGKAM 61 >gi|170078873|ref|YP_001735511.1| recombination protein F [Synechococcus sp. PCC 7002] gi|226737845|sp|B1XJ90|RECF_SYNP2 RecName: Full=DNA replication and repair protein recF gi|169886542|gb|ACB00256.1| DNA repair and genetic recombination protein [Synechococcus sp. PCC 7002] Length = 388 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSI 87 L + + +FR + Q ++F+ TI+ G N GKS+L EA+E L T R + D + Sbjct: 3 LQTLHLRNFRNYQH-QHVDFSAQKTILIGNNAQGKSNLLEAVELLASLKTHRTSRDADLV 61 Query: 88 KK 89 K+ Sbjct: 62 KQ 63 >gi|332531078|ref|ZP_08406995.1| hypothetical protein HGR_14019 [Hylemonella gracilis ATCC 19624] gi|332039463|gb|EGI75872.1| hypothetical protein HGR_14019 [Hylemonella gracilis ATCC 19624] Length = 562 Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL +I + +FR Q++ +T+V G N GK++L AI+ LF G Sbjct: 2 KLAEIRVRNFRSIETEQRLPIPGSMTLV-GPNNSGKTNLLRAIQLLFTG 49 >gi|327310670|ref|YP_004337567.1| purine NTPase [Thermoproteus uzoniensis 768-20] gi|326947149|gb|AEA12255.1| purine NTPase [Thermoproteus uzoniensis 768-20] Length = 706 Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L IE+ +F+ E+ +F + + + G NG GKSSL EA+ YG Sbjct: 2 LRSIELRNFKAHEELAA-DFVEGVNFIYGPNGAGKSSLLEAVAVALYG 48 >gi|301062719|ref|ZP_07203336.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300443199|gb|EFK07347.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 355 Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGDS 86 K+ I+I +F+ F + Q + + G NG GKSSL W Y TQ K D Sbjct: 3 KISQIKIKNFKAFQQEQTFDLKAKNVLAYGNNGSGKSSLF----WALYTLTQSSIKTDDE 58 Query: 87 IKK 89 I+K Sbjct: 59 IQK 61 >gi|182677738|ref|YP_001831884.1| chromosome segregation protein SMC [Beijerinckia indica subsp. indica ATCC 9039] gi|182633621|gb|ACB94395.1| chromosome segregation protein SMC [Beijerinckia indica subsp. indica ATCC 9039] Length = 1150 Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K + IS F+ F + LT + G NG GKS+L EA+ W+ Sbjct: 2 KFTKLHISGFKTFVDATDFLIEPGLTGIVGPNGCGKSNLVEAMRWV 47 >gi|311113795|ref|YP_003985017.1| chromosome partition protein SMC [Rothia dentocariosa ATCC 17931] gi|310945289|gb|ADP41583.1| chromosome partition protein SMC [Rothia dentocariosa ATCC 17931] Length = 1205 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + F+ F EFA + V G NG GKS++ +A+ W+ Sbjct: 3 LTSLTLRGFKSFASSTTFEFAPGINAVVGPNGSGKSNIMDALAWV 47 >gi|145296808|ref|YP_001139629.1| hypothetical protein cgR_2711 [Corynebacterium glutamicum R] gi|140846728|dbj|BAF55727.1| hypothetical protein [Corynebacterium glutamicum R] Length = 244 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 24/37 (64%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + FR E + ++F +T++ G+NG GKS+L EAI Sbjct: 24 VPAFRVLREKRTLDFRAPITVITGENGVGKSTLLEAI 60 >gi|78043999|ref|YP_361489.1| DNA recombination/replication protein RecF [Carboxydothermus hydrogenoformans Z-2901] gi|123575248|sp|Q3A8P5|RECF_CARHZ RecName: Full=DNA replication and repair protein recF gi|77996114|gb|ABB15013.1| DNA recombination/replication protein RecF [Carboxydothermus hydrogenoformans Z-2901] Length = 353 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ +FR + E+ I+F+ ++ G NG GK++L EAI +L G + R K I+ Sbjct: 6 LQLLNFRNYEELL-IDFSPGKILIYGANGQGKTNLIEAIYYLVIGKSFRGKDNSLIR 61 >gi|253999026|ref|YP_003051089.1| chromosome segregation protein SMC [Methylovorus sp. SIP3-4] gi|253985705|gb|ACT50562.1| chromosome segregation protein SMC [Methylovorus sp. SIP3-4] Length = 1173 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++++ F+ F + + V G NG GKS++ E+I W+ + + GDS+ Sbjct: 2 RLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESIRWVLGESSAKEMRGDSM 61 >gi|308234555|ref|ZP_07665292.1| condensin subunit Smc [Atopobium vaginae DSM 15829] gi|328944153|ref|ZP_08241618.1| chromosome segregation protein Smc [Atopobium vaginae DSM 15829] gi|327492122|gb|EGF23896.1| chromosome segregation protein Smc [Atopobium vaginae DSM 15829] Length = 1188 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ F + ++ F LT+V G NG GKS++S+A+ W+ Sbjct: 3 LKSLTLKGFKSFADKTEMIFDPGLTVVVGPNGSGKSNVSDAMLWVL 48 >gi|114766425|ref|ZP_01445394.1| hypothetical protein 1100011001358_R2601_25731 [Pelagibaca bermudensis HTCC2601] gi|114541366|gb|EAU44414.1| hypothetical protein R2601_25731 [Roseovarius sp. HTCC2601] Length = 865 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 28 KLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ + R FT +I+ D L +++ N GKS+L +A++ LF+ + HG + Sbjct: 2 KLRAIELHNVRQFTSPVRIDGIGDGLNVLSEPNEAGKSTLFDALQALFF-----KPHGSA 56 Query: 87 IKKRSIKTPMPMCMAVPRCKYQLK 110 K+ K P P + L+ Sbjct: 57 DKE--TKALRPHAGGAPEIRVDLE 78 >gi|39655001|pdb|1US8|A Chain A, The Rad50 Signature Motif: Essential To Atp Binding And Biological Function Length = 147 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 2 KLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|315146257|gb|EFT90273.1| RecF/RecN/SMC protein [Enterococcus faecalis TX4244] Length = 493 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 30/50 (60%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 I++++FR F Q +EF + + G N GK+++ +AIE++ G T+ Sbjct: 6 IKLTNFRCFQGTQTLEFCEGMNFFVGNNNSGKTTIFKAIEFIQSGKTKEN 55 >gi|222478962|ref|YP_002565199.1| chromosome segregation protein SMC [Halorubrum lacusprofundi ATCC 49239] gi|222451864|gb|ACM56129.1| chromosome segregation protein SMC [Halorubrum lacusprofundi ATCC 49239] Length = 1193 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + F+ F +I F D T+V G NG GKS++ I+ + + R G K Sbjct: 3 ITEVVLDGFKSFGRTTRIPFYDDFTVVTGPNGSGKSNI---IDGVLFALGLARTRGIRAK 59 Query: 89 K 89 K Sbjct: 60 K 60 >gi|153801457|ref|ZP_01956043.1| exonuclease SbcC, putative [Vibrio cholerae MZO-3] gi|124123032|gb|EAY41775.1| exonuclease SbcC, putative [Vibrio cholerae MZO-3] Length = 1013 Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHG 84 KL+ F G EI E D L ++NG G GKSS+ +AI + YG T + G Sbjct: 4 LKLILQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTG 63 Query: 85 DSIK 88 D ++ Sbjct: 64 DQMR 67 >gi|67921171|ref|ZP_00514690.1| SMC protein, N-terminal [Crocosphaera watsonii WH 8501] gi|67857288|gb|EAM52528.1| SMC protein, N-terminal [Crocosphaera watsonii WH 8501] Length = 1008 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 10/43 (23%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I FRG H + G NG GKSSL EAI W+ +G Sbjct: 18 ILDFRGL----------HTACICGANGAGKSSLLEAITWVIWG 50 >gi|330994665|ref|ZP_08318588.1| hypothetical protein SXCC_04553 [Gluconacetobacter sp. SXCC-1] gi|329758306|gb|EGG74827.1| hypothetical protein SXCC_04553 [Gluconacetobacter sp. SXCC-1] Length = 1511 Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + I+ F+ F + ++ LT + G NG GKS++ EA+ W+ G T R Sbjct: 4 RFVRLRIAGFKSFADPVSVDILPGLTGIVGPNGCGKSNVVEALRWVM-GETNAR 56 >gi|315640353|ref|ZP_07895469.1| recombination protein F [Enterococcus italicus DSM 15952] gi|315483889|gb|EFU74369.1| recombination protein F [Enterococcus italicus DSM 15952] Length = 373 Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L + + HFR + E+Q + FA L I G+N GK++L E+I Sbjct: 2 RLNSLTLRHFRNYDELQ-LPFAKDLIIFLGENAQGKTNLLESI 43 >gi|320450440|ref|YP_004202536.1| chromosome segregation SMC protein [Thermus scotoductus SA-01] gi|320150609|gb|ADW21987.1| chromosome segregation SMC protein [Thermus scotoductus SA-01] Length = 1010 Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 24/37 (64%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 F+ F E ++F D +T + G NG GKS+L EA+ ++ Sbjct: 15 FKSFAERTALDFPDPITGIIGPNGSGKSNLVEALRFV 51 >gi|114763721|ref|ZP_01443115.1| SMC protein [Pelagibaca bermudensis HTCC2601] gi|114543722|gb|EAU46735.1| SMC protein [Roseovarius sp. HTCC2601] Length = 1151 Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ F+ F + + ++ LT V G NG GKS+L EA+ W+ Sbjct: 6 LRLTGFKSFVDPTDLVISEGLTGVVGPNGCGKSNLLEALRWV 47 >gi|9954932|pdb|1F2T|A Chain A, Crystal Structure Of Atp-Free Rad50 Abc-Atpase gi|9954934|pdb|1F2U|A Chain A, Crystal Structure Of Rad50 Abc-Atpase gi|9954936|pdb|1F2U|C Chain C, Crystal Structure Of Rad50 Abc-Atpase Length = 149 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 2 KLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|209522791|ref|ZP_03271349.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496840|gb|EDZ97137.1| SMC domain protein [Arthrospira maxima CS-328] Length = 1044 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 22/38 (57%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 H + G NG GKSSL EAI W +G+++ D I+ Sbjct: 43 HTACICGPNGAGKSSLLEAIAWSIWGHSRAGTEDDLIQ 80 >gi|115526436|ref|YP_783347.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisA53] gi|115520383|gb|ABJ08367.1| condensin subunit Smc [Rhodopseudomonas palustris BisA53] Length = 1154 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|92118696|ref|YP_578425.1| chromosome segregation protein SMC [Nitrobacter hamburgensis X14] gi|91801590|gb|ABE63965.1| condensin subunit Smc [Nitrobacter hamburgensis X14] Length = 1170 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 4 KLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRW 48 >gi|85714259|ref|ZP_01045247.1| Chromosome segregation protein SMC [Nitrobacter sp. Nb-311A] gi|85698706|gb|EAQ36575.1| Chromosome segregation protein SMC [Nitrobacter sp. Nb-311A] Length = 1168 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRW 46 >gi|327485552|gb|AEA79958.1| Exonuclease SbcC [Vibrio cholerae LMA3894-4] Length = 1013 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHG 84 KL+ F G EI E D L ++NG G GKSS+ +AI + YG T + G Sbjct: 4 LKLILQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTG 63 Query: 85 DSIK 88 D ++ Sbjct: 64 DQMR 67 >gi|222110863|ref|YP_002553127.1| chromosome segregation protein smc [Acidovorax ebreus TPSY] gi|221730307|gb|ACM33127.1| chromosome segregation protein SMC [Acidovorax ebreus TPSY] Length = 1174 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLAGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|121594442|ref|YP_986338.1| chromosome segregation protein SMC [Acidovorax sp. JS42] gi|120606522|gb|ABM42262.1| chromosome segregation protein SMC [Acidovorax sp. JS42] Length = 1174 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLAGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|121998659|ref|YP_001003446.1| chromosome segregation protein SMC [Halorhodospira halophila SL1] gi|121590064|gb|ABM62644.1| chromosome segregation protein SMC [Halorhodospira halophila SL1] Length = 1165 Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 30/56 (53%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 I+++ F+ F + + + V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 6 IKLAGFKSFVDPTSVPLPGRMVAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGESM 61 >gi|325959801|ref|YP_004291267.1| SMC domain-containing protein [Methanobacterium sp. AL-21] gi|325331233|gb|ADZ10295.1| SMC domain protein [Methanobacterium sp. AL-21] Length = 900 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++E+ +F+ + KI+F +TI+ G NG GKSS+ EA+ + + +K Sbjct: 5 NLEMKNFKSHKD-TKIDFDTGITIIMGGNGAGKSSILEAVSFALFKQHSSKK 55 >gi|320161717|ref|YP_004174942.1| putative nuclease SbcCD subunit C [Anaerolinea thermophila UNI-1] gi|319995571|dbj|BAJ64342.1| putative nuclease SbcCD subunit C [Anaerolinea thermophila UNI-1] Length = 852 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 20/30 (66%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++G NG GKSSL +AI W+ +G + R Sbjct: 27 LACISGSNGAGKSSLLDAITWVLFGKARAR 56 >gi|257095176|ref|YP_003168817.1| chromosome segregation protein SMC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047700|gb|ACV36888.1| chromosome segregation protein SMC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1171 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLTKLKLAGFKSFVDPTTIALPGQLVGVVGPNGCGKSNVMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|169786935|ref|YP_001708747.1| hypothetical protein p3ABAYE0061 [Acinetobacter baumannii AYE] gi|260556828|ref|ZP_05829045.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|293611315|ref|ZP_06693612.1| predicted protein [Acinetobacter sp. SH024] gi|169147096|emb|CAM84754.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|260409434|gb|EEX02735.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|292826326|gb|EFF84694.1| predicted protein [Acinetobacter sp. SH024] Length = 651 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + KL +IEI ++ FT Q I + +T++ G N GK+S+ E + Sbjct: 1 MIKLKNIEILKYKSFTTPQSINIEEDITVLVGMNESGKTSVLECL 45 >gi|299067451|emb|CBJ38650.1| Chromosome segregation protein SMC [Ralstonia solanacearum CMR15] Length = 1171 Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 18/75 (24%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW--------------- 72 +L I+++ F+ F E L + G NG GKS++ +A+ W Sbjct: 2 RLSSIKLAGFKSFVEPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGESM 61 Query: 73 ---LFYGYTQRRKHG 84 +F G TQR+ G Sbjct: 62 QDVIFNGSTQRKPAG 76 >gi|291530315|emb|CBK95900.1| hypothetical protein EUS_06270 [Eubacterium siraeum 70/3] Length = 617 Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 + +FR F E+ E +T+++GQNG GKS+L Sbjct: 14 VEYFRNFKEVS-FELGRKITVISGQNGVGKSNL 45 >gi|77458653|ref|YP_348159.1| hypothetical protein Pfl01_2428 [Pseudomonas fluorescens Pf0-1] gi|77382656|gb|ABA74169.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 849 Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 3/43 (6%) Query: 34 ISHFRGFTEIQ---KIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +S F GF ++ +++ + +T+V G+NG GKSSL +A++ L Sbjct: 82 LSDFSGFKKLSGTLRLDLSKRITLVFGRNGAGKSSLCQALKIL 124 >gi|310817865|ref|YP_003950223.1| DNA replication and repair protein RecF [Stigmatella aurantiaca DW4/3-1] gi|309390937|gb|ADO68396.1| DNA replication and repair protein RecF [Stigmatella aurantiaca DW4/3-1] Length = 481 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +LL ++ +FR ++ + + H TI GQNG GK++L EA+ +L Sbjct: 2 RLLALQAQNFRNLHQVS-LAPSPHATIAVGQNGQGKTNLLEALYFL 46 >gi|305681389|ref|ZP_07404196.1| chromosome segregation protein SMC [Corynebacterium matruchotii ATCC 14266] gi|305659594|gb|EFM49094.1| chromosome segregation protein SMC [Corynebacterium matruchotii ATCC 14266] Length = 1198 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 LS +T Y + L + F+ F ++F + +V G NG GKS++ +A+ W Sbjct: 15 LSAKVTEVYLKSLTLR-------GFKSFASATTLKFEPGICVVVGPNGSGKSNVVDALAW 67 Query: 73 L 73 + Sbjct: 68 V 68 >gi|17231480|ref|NP_488028.1| hypothetical protein alr3988 [Nostoc sp. PCC 7120] gi|17133123|dbj|BAB75687.1| alr3988 [Nostoc sp. PCC 7120] Length = 1008 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 20/37 (54%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 H + G NG GKSSL EAI W +G ++ D I Sbjct: 25 HTACICGSNGAGKSSLLEAITWALWGESRAAAEDDVI 61 >gi|320161646|ref|YP_004174871.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] gi|319995500|dbj|BAJ64271.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] Length = 1202 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +E+ ++ F EF +T + G NG GKS++++A+ W+ Sbjct: 4 LKSLELHGYKTFASRTLFEFPGMVTAIVGPNGSGKSNIADAVRWVL 49 >gi|83945335|ref|ZP_00957683.1| smc protein [Oceanicaulis alexandrii HTCC2633] gi|83851169|gb|EAP89026.1| smc protein [Oceanicaulis alexandrii HTCC2633] Length = 1145 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K + ++ F+ F + ++ LT + G NG GKS+L EA+ W+ + + G + Sbjct: 2 KFTQLRLAGFKSFVDPTELRIDAGLTGIIGPNGCGKSNLLEALRWVMGATSAKSLRGGGM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|70606001|ref|YP_254871.1| hypothetical protein Saci_0157 [Sulfolobus acidocaldarius DSM 639] gi|68566649|gb|AAY79578.1| conserved protein [Sulfolobus acidocaldarius DSM 639] Length = 495 Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 7/66 (10%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL++ +++FR + + K+ L I+ G NGYGK++L AI +LF + G + Sbjct: 2 KLIEFYVNNFRSISSV-KLTGLGGLNIIVGYNGYGKTNLLTAI-YLFI-----KNLGAGL 54 Query: 88 KKRSIK 93 +KR+I+ Sbjct: 55 EKRNIE 60 >gi|315924202|ref|ZP_07920428.1| chromosome segregation protein Smc [Pseudoramibacter alactolyticus ATCC 23263] gi|315622604|gb|EFV02559.1| chromosome segregation protein Smc [Pseudoramibacter alactolyticus ATCC 23263] Length = 1192 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I+ F+ F + ++ F + + G NG GKS++ +AI W+ Sbjct: 3 LKSLRITGFKSFADTVELSFDQMIAAIVGPNGSGKSNIIDAIRWVL 48 >gi|300741692|ref|ZP_07071713.1| Smc [Rothia dentocariosa M567] gi|300380877|gb|EFJ77439.1| Smc [Rothia dentocariosa M567] Length = 1205 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + F+ F EFA + V G NG GKS++ +A+ W+ Sbjct: 3 LTSLTLRGFKSFASSTTFEFAPGINAVVGPNGSGKSNIMDALAWV 47 >gi|304316838|ref|YP_003851983.1| SMC domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778340|gb|ADL68899.1| SMC domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 853 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 34 ISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +F ++E + ++F H+ + G+NG GKS+L +AI W +G Sbjct: 8 LKNFMSYSEHEVMDFTRFHVAAIVGKNGNGKSALWDAITWCIWG 51 >gi|110597191|ref|ZP_01385480.1| Chromosome segregation protein SMC [Chlorobium ferrooxidans DSM 13031] gi|110341382|gb|EAT59847.1| Chromosome segregation protein SMC [Chlorobium ferrooxidans DSM 13031] Length = 1178 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ F+ F +I F LT + G NG GK+++ +A+ W+ Sbjct: 3 LSKIELFGFKSFAHKVRISFDKGLTAIVGPNGCGKTNVVDAMRWVL 48 >gi|39996232|ref|NP_952183.1| chromosome segregation SMC protein [Geobacter sulfurreducens PCA] gi|28375553|emb|CAD66600.1| SMC protein [Geobacter sulfurreducens] gi|39983112|gb|AAR34506.1| chromosome segregation SMC protein, putative [Geobacter sulfurreducens PCA] gi|298505244|gb|ADI83967.1| chromosome segregation ATPase SMC [Geobacter sulfurreducens KN400] Length = 1175 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ ++I F+ F + +F +T + G NG GKS++ +AI W + + G S+ Sbjct: 2 KIKRLDIVGFKSFVDKVSFDFQQGITGIVGPNGCGKSNVVDAIRWAMGEQSAKNLRGRSM 61 Query: 88 K 88 + Sbjct: 62 E 62 >gi|304314688|ref|YP_003849835.1| DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] gi|302588147|gb|ADL58522.1| predicted DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] Length = 837 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ + R + E +EF D +T+ G G GK++L AIE+ +G +R GDS+ Sbjct: 6 LELRNIRSY-ESGTVEFDDGVTLFEGDIGSGKTTLLLAIEFALFGLGDQR--GDSL 58 >gi|264678825|ref|YP_003278732.1| chromosome segregation protein SMC [Comamonas testosteroni CNB-2] gi|299529803|ref|ZP_07043236.1| chromosome segregation protein SMC [Comamonas testosteroni S44] gi|262209338|gb|ACY33436.1| chromosome segregation protein SMC [Comamonas testosteroni CNB-2] gi|298722217|gb|EFI63141.1| chromosome segregation protein SMC [Comamonas testosteroni S44] Length = 1175 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E + V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFILPGQMVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|294877700|ref|XP_002768083.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239870280|gb|EER00801.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1519 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K L++E +FR + F D L ++ G NG GKS+ + G + R+ +I Sbjct: 392 KNLEVEFGNFRAVDGLDLTMFRDELFVLLGHNGAGKSTTINVLS----GTIKPRRGDVTI 447 Query: 88 KKRSIKTPMPM 98 R + MP+ Sbjct: 448 FNREVPAEMPV 458 >gi|260948944|ref|XP_002618769.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720] gi|238848641|gb|EEQ38105.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720] Length = 1277 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS R F T+ + I+F LT++ GQNG GK+++ E +++ G Sbjct: 4 LYKLSISGIRSFSPTDHETIQFGTPLTLICGQNGCGKTTIIECLKYATTG 53 >gi|221066627|ref|ZP_03542732.1| chromosome segregation protein SMC [Comamonas testosteroni KF-1] gi|220711650|gb|EED67018.1| chromosome segregation protein SMC [Comamonas testosteroni KF-1] Length = 1175 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I++S F+ F E + V G NG GKS++ +A+ W+ G+S+ Sbjct: 2 RLNSIKLSGFKSFAEPTNFILPGQMVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESM 61 Query: 88 K 88 + Sbjct: 62 Q 62 >gi|48477928|ref|YP_023634.1| chromosome partition protein smc [Picrophilus torridus DSM 9790] gi|48430576|gb|AAT43441.1| chromosome partition protein smc [Picrophilus torridus DSM 9790] Length = 1150 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 IEI +F+ + + KI F T++ G NG GKS++ +AI ++ Sbjct: 6 IEIDNFKSYGKKTKIYFKPGFTVIIGPNGSGKSNIGDAILFVL 48 >gi|20093122|ref|NP_619197.1| chromosome segregation protein [Methanosarcina acetivorans C2A] gi|19918459|gb|AAM07677.1| chromosome segregation protein [Methanosarcina acetivorans C2A] Length = 1175 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 25/40 (62%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +IE +F+ F + KI F + T ++G NG GKS++ + I Sbjct: 5 EIEFVNFKSFGKKVKISFYNDFTTISGPNGSGKSNIIDGI 44 >gi|327200673|pdb|3QKT|A Chain A, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200674|pdb|3QKT|B Chain B, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200675|pdb|3QKT|C Chain C, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200676|pdb|3QKT|D Chain D, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp Length = 339 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 2 KLERVTVKNFRSHSDTV-VEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|308177250|ref|YP_003916656.1| chromosome segregation protein Smc [Arthrobacter arilaitensis Re117] gi|307744713|emb|CBT75685.1| chromosome segregation protein Smc [Arthrobacter arilaitensis Re117] Length = 1190 Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + F+ F EF +T V G NG GKS++ +A+ W+ Sbjct: 3 LKTLTVRGFKSFASATTFEFEPGVTAVVGPNGSGKSNVVDALSWV 47 >gi|291299633|ref|YP_003510911.1| chromosome segregation protein SMC [Stackebrandtia nassauensis DSM 44728] gi|290568853|gb|ADD41818.1| chromosome segregation protein SMC [Stackebrandtia nassauensis DSM 44728] Length = 1191 Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ F + F +T V G NG GKS++ +AI W+ Sbjct: 3 LKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDAIAWVL 48 >gi|89897383|ref|YP_520870.1| hypothetical protein DSY4637 [Desulfitobacterium hafniense Y51] gi|89336831|dbj|BAE86426.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 708 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++I ++R F +++ IEF++ L ++ G+N GK+++ +A++ F G Sbjct: 44 LKIQNYRCFQDVE-IEFSEGLNVIIGENNCGKTTILKALQCFFKG 87 >gi|90425846|ref|YP_534216.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisB18] gi|90107860|gb|ABD89897.1| condensin subunit Smc [Rhodopseudomonas palustris BisB18] Length = 1154 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL + + F+ F E LT V G NG GKS+L EA+ W Sbjct: 2 KLTRLRLHGFKSFVEPTDFLIEPGLTGVVGPNGCGKSNLVEALRW 46 Searching..................................................done Results from round 2 >gi|254780640|ref|YP_003065053.1| hypothetical protein CLIBASIA_02635 [Candidatus Liberibacter asiaticus str. psy62] gi|254040317|gb|ACT57113.1| hypothetical protein CLIBASIA_02635 [Candidatus Liberibacter asiaticus str. psy62] Length = 110 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG Sbjct: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK Sbjct: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 >gi|116492610|ref|YP_804345.1| condensin subunit Smc [Pediococcus pentosaceus ATCC 25745] gi|116102760|gb|ABJ67903.1| condensin subunit Smc [Pediococcus pentosaceus ATCC 25745] Length = 1176 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IEIS F+ F + KIEF D +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLRTIEISGFKSFADNTKIEFKDGITGIVGPNGSGKSNIIEAIRWVMGETSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFSGTEKRKPLSRA 78 >gi|259046635|ref|ZP_05737036.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259036800|gb|EEW38055.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 1189 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L IE+S F+ F + IEF +T V G NG GKS+LSEAI+W+ + + G Sbjct: 1 MQLEKIEMSGFKSFADKTTIEFDKGVTAVVGPNGSGKSNLSEAIKWVLGEQSAKSLRGKR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + +T P+ +A Sbjct: 61 MDDVIFAGSQTRKPVNIA 78 >gi|332638234|ref|ZP_08417097.1| Barmotin [Weissella cibaria KACC 11862] Length = 1185 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + KIEF +T V G NG GKS++ EAI W+ + + GD Sbjct: 1 MKLKTLEISGFKSFADRTKIEFMPGITGVVGPNGSGKSNIIEAIRWVMGEQSAKGLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MSDVIFGGTSQRAPLNRA 78 >gi|212695674|ref|ZP_03303802.1| hypothetical protein ANHYDRO_00191 [Anaerococcus hydrogenalis DSM 7454] gi|212677347|gb|EEB36954.1| hypothetical protein ANHYDRO_00191 [Anaerococcus hydrogenalis DSM 7454] Length = 246 Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +L +E+ F+ F E KI+F + +T V G NG GKS++++AI+W+ + + G Sbjct: 2 IYIRLESVELKGFKSFAERTKIKFNNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRG 61 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + + PM MA Sbjct: 62 KKMDDVIFQGSDQKKPMNMA 81 >gi|328957312|ref|YP_004374698.1| chromosome condensation and segregation SMC ATPase [Carnobacterium sp. 17-4] gi|328673636|gb|AEB29682.1| chromosome condensation and segregation SMC ATPase [Carnobacterium sp. 17-4] Length = 1190 Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L I+I+ F+ F + IEF D +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MQLKRIDIAGFKSFADKTTIEFHDGVTAVVGPNGSGKSNITEAIRWVLGEQSAKNLRGGR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ +A Sbjct: 61 MNDVIFSGSDTRKPVNLA 78 >gi|304384764|ref|ZP_07367110.1| cell division protein Smc [Pediococcus acidilactici DSM 20284] gi|304328958|gb|EFL96178.1| cell division protein Smc [Pediococcus acidilactici DSM 20284] Length = 1184 Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IEIS F+ F + KI+F D +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLRTIEISGFKSFADHTKIDFKDGITGIVGPNGSGKSNIIEAIRWVMGETSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFSGTQKRKPLSRA 78 >gi|270290358|ref|ZP_06196583.1| chromosome segregation protein SMC [Pediococcus acidilactici 7_4] gi|270281139|gb|EFA26972.1| chromosome segregation protein SMC [Pediococcus acidilactici 7_4] Length = 1184 Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IEIS F+ F + KI+F D +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLRTIEISGFKSFADHTKIDFKDGITGIVGPNGSGKSNIIEAIRWVMGETSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFSGTQKRKPLSRA 78 >gi|238854773|ref|ZP_04645103.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3] gi|260664005|ref|ZP_05864858.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US] gi|282933851|ref|ZP_06339199.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] gi|238832563|gb|EEQ24870.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3] gi|260561891|gb|EEX27860.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US] gi|281301940|gb|EFA94194.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] Length = 1189 Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSN 60 Query: 87 IKK-----RSIKTPM 96 +K +TPM Sbjct: 61 MKDVIFAGSQYRTPM 75 >gi|241895654|ref|ZP_04782950.1| SMC structural maintenance of chromosomes partitioning protein [Weissella paramesenteroides ATCC 33313] gi|241871021|gb|EER74772.1| SMC structural maintenance of chromosomes partitioning protein [Weissella paramesenteroides ATCC 33313] Length = 1184 Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI+ F+ F E KIEF +T V G NG GKS++ EAI W+ + + GD Sbjct: 1 MKLKTLEITGFKSFAERTKIEFMPGITGVVGPNGSGKSNIIEAIRWVMGEQSAKGLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFGGTSERAPLNRA 78 >gi|260583708|ref|ZP_05851456.1| cell division protein Smc [Granulicatella elegans ATCC 700633] gi|260158334|gb|EEW93402.1| cell division protein Smc [Granulicatella elegans ATCC 700633] Length = 1186 Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L IE+S F+ F + IEF +T V G NG GKS+LSEAI+W+ + + G Sbjct: 1 MQLEKIEMSGFKSFADKTVIEFDKGVTAVVGPNGSGKSNLSEAIKWVLGEQSAKSLRGKK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + +T P+ +A Sbjct: 61 MDDVIFAGSQTRKPVNIA 78 >gi|256851299|ref|ZP_05556688.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN] gi|260660723|ref|ZP_05861638.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN] gi|282933256|ref|ZP_06338643.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] gi|256616361|gb|EEU21549.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN] gi|260548445|gb|EEX24420.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN] gi|281302760|gb|EFA94975.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1] Length = 1189 Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSN 60 Query: 87 IKK-----RSIKTPM 96 +K +TPM Sbjct: 61 MKDVIFAGSQYRTPM 75 >gi|297206168|ref|ZP_06923563.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16] gi|297149294|gb|EFH29592.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16] Length = 1189 Score = 97.4 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++ F+ F E KI+F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELTLTGFKSFAEKTKIKFGDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGSN 60 Query: 87 IKK-----RSIKTPM 96 +K +TPM Sbjct: 61 MKDVIFAGSQYRTPM 75 >gi|315172943|gb|EFU16960.1| segregation protein SMC [Enterococcus faecalis TX1346] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|315164396|gb|EFU08413.1| segregation protein SMC [Enterococcus faecalis TX1302] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|315151033|gb|EFT95049.1| segregation protein SMC [Enterococcus faecalis TX0012] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|307276680|ref|ZP_07557798.1| segregation protein SMC [Enterococcus faecalis TX2134] gi|306506790|gb|EFM75942.1| segregation protein SMC [Enterococcus faecalis TX2134] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|307288869|ref|ZP_07568842.1| segregation protein SMC [Enterococcus faecalis TX0109] gi|306500141|gb|EFM69485.1| segregation protein SMC [Enterococcus faecalis TX0109] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|257417225|ref|ZP_05594219.1| chromosome partition protein SMC [Enterococcus faecalis AR01/DG] gi|257159053|gb|EEU89013.1| chromosome partition protein SMC [Enterococcus faecalis ARO1/DG] gi|315146606|gb|EFT90622.1| segregation protein SMC [Enterococcus faecalis TX4244] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|257088211|ref|ZP_05582572.1| chromosome partition protein SMC [Enterococcus faecalis D6] gi|256996241|gb|EEU83543.1| chromosome partition protein SMC [Enterococcus faecalis D6] gi|315026455|gb|EFT38387.1| segregation protein SMC [Enterococcus faecalis TX2137] gi|315171218|gb|EFU15235.1| segregation protein SMC [Enterococcus faecalis TX1342] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|257083237|ref|ZP_05577598.1| chromosome partition protein SMC [Enterococcus faecalis Fly1] gi|256991267|gb|EEU78569.1| chromosome partition protein SMC [Enterococcus faecalis Fly1] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|256962934|ref|ZP_05567105.1| chromosome partition protein SMC [Enterococcus faecalis HIP11704] gi|307273592|ref|ZP_07554820.1| segregation protein SMC [Enterococcus faecalis TX0855] gi|256953430|gb|EEU70062.1| chromosome partition protein SMC [Enterococcus faecalis HIP11704] gi|306509605|gb|EFM78647.1| segregation protein SMC [Enterococcus faecalis TX0855] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|256960444|ref|ZP_05564615.1| chromosome partition protein SMC [Enterococcus faecalis Merz96] gi|293385102|ref|ZP_06630928.1| cell division protein Smc [Enterococcus faecalis R712] gi|293389075|ref|ZP_06633547.1| cell division protein Smc [Enterococcus faecalis S613] gi|312906715|ref|ZP_07765715.1| segregation protein SMC [Enterococcus faecalis DAPTO 512] gi|312910824|ref|ZP_07769660.1| chromosome segregation protein SMC [Enterococcus faecalis DAPTO 516] gi|256950940|gb|EEU67572.1| chromosome partition protein SMC [Enterococcus faecalis Merz96] gi|291077579|gb|EFE14943.1| cell division protein Smc [Enterococcus faecalis R712] gi|291081543|gb|EFE18506.1| cell division protein Smc [Enterococcus faecalis S613] gi|310627363|gb|EFQ10646.1| segregation protein SMC [Enterococcus faecalis DAPTO 512] gi|311288847|gb|EFQ67403.1| chromosome segregation protein SMC [Enterococcus faecalis DAPTO 516] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|256958377|ref|ZP_05562548.1| chromosome partition protein SMC [Enterococcus faecalis DS5] gi|257078312|ref|ZP_05572673.1| chromosome partition protein SMC [Enterococcus faecalis JH1] gi|257080501|ref|ZP_05574862.1| chromosome partition protein SMC [Enterococcus faecalis E1Sol] gi|294780224|ref|ZP_06745596.1| chromosome segregation protein SMC [Enterococcus faecalis PC1.1] gi|307270585|ref|ZP_07551883.1| segregation protein SMC [Enterococcus faecalis TX4248] gi|256948873|gb|EEU65505.1| chromosome partition protein SMC [Enterococcus faecalis DS5] gi|256986342|gb|EEU73644.1| chromosome partition protein SMC [Enterococcus faecalis JH1] gi|256988531|gb|EEU75833.1| chromosome partition protein SMC [Enterococcus faecalis E1Sol] gi|294452767|gb|EFG21197.1| chromosome segregation protein SMC [Enterococcus faecalis PC1.1] gi|306513166|gb|EFM81800.1| segregation protein SMC [Enterococcus faecalis TX4248] gi|315034801|gb|EFT46733.1| segregation protein SMC [Enterococcus faecalis TX0027] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|256618146|ref|ZP_05474992.1| chromosome partition protein SMC [Enterococcus faecalis ATCC 4200] gi|256597673|gb|EEU16849.1| chromosome partition protein SMC [Enterococcus faecalis ATCC 4200] gi|315031784|gb|EFT43716.1| segregation protein SMC [Enterococcus faecalis TX0017] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|255974284|ref|ZP_05424870.1| chromosome partition protein SMC [Enterococcus faecalis T2] gi|307284871|ref|ZP_07565027.1| segregation protein SMC [Enterococcus faecalis TX0860] gi|255967156|gb|EET97778.1| chromosome partition protein SMC [Enterococcus faecalis T2] gi|306503130|gb|EFM72387.1| segregation protein SMC [Enterococcus faecalis TX0860] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|255970708|ref|ZP_05421294.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|312953195|ref|ZP_07772041.1| segregation protein SMC [Enterococcus faecalis TX0102] gi|255961726|gb|EET94202.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|310628812|gb|EFQ12095.1| segregation protein SMC [Enterococcus faecalis TX0102] gi|315152763|gb|EFT96779.1| segregation protein SMC [Enterococcus faecalis TX0031] gi|315159401|gb|EFU03418.1| segregation protein SMC [Enterococcus faecalis TX0312] gi|327536217|gb|AEA95051.1| cell division protein Smc [Enterococcus faecalis OG1RF] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|300861663|ref|ZP_07107747.1| chromosome segregation protein SMC [Enterococcus faecalis TUSoD Ef11] gi|300849124|gb|EFK76877.1| chromosome segregation protein SMC [Enterococcus faecalis TUSoD Ef11] gi|315145469|gb|EFT89485.1| segregation protein SMC [Enterococcus faecalis TX2141] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|229547476|ref|ZP_04436201.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX1322] gi|256854771|ref|ZP_05560135.1| chromosome partition protein SMC [Enterococcus faecalis T8] gi|229307400|gb|EEN73387.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX1322] gi|256710331|gb|EEU25375.1| chromosome partition protein SMC [Enterococcus faecalis T8] gi|315028378|gb|EFT40310.1| segregation protein SMC [Enterococcus faecalis TX4000] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|227554518|ref|ZP_03984565.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis HH22] gi|227176316|gb|EEI57288.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis HH22] Length = 977 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|227517299|ref|ZP_03947348.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX0104] gi|227075306|gb|EEI13269.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis TX0104] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|29377553|ref|NP_816707.1| chromosome partition protein SMC [Enterococcus faecalis V583] gi|229548051|ref|ZP_04436776.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis ATCC 29200] gi|256761075|ref|ZP_05501655.1| chromosome partition protein SMC [Enterococcus faecalis T3] gi|257091336|ref|ZP_05585697.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257417942|ref|ZP_05594936.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420450|ref|ZP_05597440.1| chromosome partition protein SMC [Enterococcus faecalis X98] gi|307292115|ref|ZP_07571981.1| segregation protein SMC [Enterococcus faecalis TX0411] gi|312902146|ref|ZP_07761406.1| segregation protein SMC [Enterococcus faecalis TX0470] gi|312905398|ref|ZP_07764512.1| segregation protein SMC [Enterococcus faecalis TX0635] gi|28375547|emb|CAD66597.1| SMC protein [Enterococcus faecalis] gi|29345020|gb|AAO82777.1| chromosome partition protein SMC [Enterococcus faecalis V583] gi|229306840|gb|EEN72836.1| SMC structural maintenance of chromosomes partitioning protein [Enterococcus faecalis ATCC 29200] gi|256682326|gb|EEU22021.1| chromosome partition protein SMC [Enterococcus faecalis T3] gi|257000148|gb|EEU86668.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257159770|gb|EEU89730.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162274|gb|EEU92234.1| chromosome partition protein SMC [Enterococcus faecalis X98] gi|306496768|gb|EFM66319.1| segregation protein SMC [Enterococcus faecalis TX0411] gi|310631127|gb|EFQ14410.1| segregation protein SMC [Enterococcus faecalis TX0635] gi|311290810|gb|EFQ69366.1| segregation protein SMC [Enterococcus faecalis TX0470] gi|315154689|gb|EFT98705.1| segregation protein SMC [Enterococcus faecalis TX0043] gi|315161160|gb|EFU05177.1| segregation protein SMC [Enterococcus faecalis TX0645] gi|315167204|gb|EFU11221.1| segregation protein SMC [Enterococcus faecalis TX1341] gi|315573245|gb|EFU85436.1| segregation protein SMC [Enterococcus faecalis TX0309B] gi|315577148|gb|EFU89339.1| segregation protein SMC [Enterococcus faecalis TX0630] gi|315581181|gb|EFU93372.1| segregation protein SMC [Enterococcus faecalis TX0309A] Length = 1192 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|254556538|ref|YP_003062955.1| cell division protein Smc [Lactobacillus plantarum JDM1] gi|300767267|ref|ZP_07077179.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180481|ref|YP_003924609.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045465|gb|ACT62258.1| cell division protein Smc [Lactobacillus plantarum JDM1] gi|300495086|gb|EFK30242.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045972|gb|ADN98515.1| cell division protein Smc [Lactobacillus plantarum subsp. plantarum ST-III] Length = 1185 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EIS F+ F + KI+F +T + G NG GKS++ EAI W+ + G Sbjct: 1 MQLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQAVKSLRGTK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MTDVIFAGSANRKPLNMA 78 >gi|28378330|ref|NP_785222.1| cell division protein Smc [Lactobacillus plantarum WCFS1] gi|28271165|emb|CAD64070.1| cell division protein Smc [Lactobacillus plantarum WCFS1] Length = 1185 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EIS F+ F + KI+F +T + G NG GKS++ EAI W+ + G Sbjct: 1 MQLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQAVKSLRGTK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MTDVIFAGSANRKPLNMA 78 >gi|257870562|ref|ZP_05650215.1| chromosome partition protein SMC [Enterococcus gallinarum EG2] gi|257804726|gb|EEV33548.1| chromosome partition protein SMC [Enterococcus gallinarum EG2] Length = 1196 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADRTIIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ +A Sbjct: 61 MPDIIFAGSDTRKPLNVA 78 >gi|329575675|gb|EGG57202.1| RecF/RecN/SMC protein [Enterococcus faecalis TX1467] Length = 287 Score = 95.8 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|163790809|ref|ZP_02185234.1| chromosome partition protein SMC [Carnobacterium sp. AT7] gi|159873877|gb|EDP67956.1| chromosome partition protein SMC [Carnobacterium sp. AT7] Length = 1190 Score = 95.8 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L I+I+ F+ F + IEF D +T V G NG GKS+++EAI W+ + R G Sbjct: 1 MQLKRIDIAGFKSFADKTTIEFHDGVTAVVGPNGSGKSNITEAIRWVLGEQSARNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MNDIIFSGSDTRKSVNLA 78 >gi|325849116|ref|ZP_08170608.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480361|gb|EGC83424.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 463 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +L +E+ F+ F E KI+F + +T V G NG GKS++++AI+W+ + + G Sbjct: 2 IYIRLESVELKGFKSFAERTKIKFNNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRG 61 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + + PM MA Sbjct: 62 KKMDDVIFQGSDQKKPMNMA 81 >gi|260663570|ref|ZP_05864460.1| chromosome segregation protein SMC [Lactobacillus fermentum 28-3-CHN] gi|260552111|gb|EEX25164.1| chromosome segregation protein SMC [Lactobacillus fermentum 28-3-CHN] Length = 1187 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD Sbjct: 1 MRLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGAADRKPLNRA 78 >gi|227515695|ref|ZP_03945744.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus fermentum ATCC 14931] gi|227085943|gb|EEI21255.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus fermentum ATCC 14931] Length = 1187 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD Sbjct: 1 MRLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGAADRKPLNRA 78 >gi|184155713|ref|YP_001844053.1| chromosome segregation protein [Lactobacillus fermentum IFO 3956] gi|183227057|dbj|BAG27573.1| chromosome segregation protein [Lactobacillus fermentum IFO 3956] Length = 1187 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +EI F+ F + I+F +T + G NG GKS++ EAI W+ + + GD Sbjct: 1 MRLLSLEIEGFKSFADKTVIDFRPGMTGIIGPNGSGKSNIIEAIRWVMGEQSAKTLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGAADRKPLNRA 78 >gi|116333589|ref|YP_795116.1| chromosome segregation ATPase [Lactobacillus brevis ATCC 367] gi|116098936|gb|ABJ64085.1| condensin subunit Smc [Lactobacillus brevis ATCC 367] Length = 1183 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EIS F+ F + +I+F +T + G NG GKS++SEA+ W+ + + G Sbjct: 1 MRLKTLEISGFKSFADKTRIDFLPGMTGIVGPNGSGKSNISEAVRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MPDVIFAGSADRHPLNRA 78 >gi|323479028|gb|ADX78467.1| chromosome partition protein SMC [Enterococcus faecalis 62] Length = 308 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI+ F+ F + IEF D +T V G NG GKS+++EA+ W+ + + G Sbjct: 1 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MNDIIFAGSEGRKPLNIA 78 >gi|332685823|ref|YP_004455597.1| chromosome partition protein Smc [Melissococcus plutonius ATCC 35311] gi|332369832|dbj|BAK20788.1| chromosome partition protein Smc [Melissococcus plutonius ATCC 35311] Length = 1192 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADRTIIDFENGVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ +A Sbjct: 61 MPDIIFAGTQERKPLNIA 78 >gi|315640112|ref|ZP_07895234.1| cell division protein Smc [Enterococcus italicus DSM 15952] gi|315484089|gb|EFU74563.1| cell division protein Smc [Enterococcus italicus DSM 15952] Length = 1195 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F I+F D +T + G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEVAGFKSFANRTTIQFEDQVTAIVGPNGSGKSNITEAIRWVLGESSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ +A Sbjct: 61 MPDIIFAGSESRKPLNIA 78 >gi|118581719|ref|YP_902969.1| chromosome segregation protein SMC [Pelobacter propionicus DSM 2379] gi|118504429|gb|ABL00912.1| condensin subunit Smc [Pelobacter propionicus DSM 2379] Length = 1176 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI F+ F + ++F +T V G NG GKS++ ++I W + + G + Sbjct: 1 MKIKRLEICGFKSFADRVVLDFQQGVTGVVGPNGCGKSNIVDSIRWCMGEQSAKNLRGKA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ MA Sbjct: 61 MEDVIFAGSETRKPLGMA 78 >gi|227510451|ref|ZP_03940500.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190103|gb|EEI70170.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 1183 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ + + G Sbjct: 1 MQLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVLGEQSAKNLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MPDVIFSGSADRRSLNMA 78 >gi|282890838|ref|ZP_06299356.1| hypothetical protein pah_c028o014 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499266|gb|EFB41567.1| hypothetical protein pah_c028o014 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1168 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L +IEI+ F+ F + ++F + +T + G NG GKS+ ++A W+ + + G Sbjct: 4 VLRLKEIEITGFKSFADRTTLKFHEGITAIVGPNGCGKSNTADAFRWVLGEQSAKSLRGG 63 Query: 86 SI---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 64 KMHDVIFAGASQRKPLNMA 82 >gi|293379493|ref|ZP_06625637.1| chromosome segregation protein SMC [Enterococcus faecium PC4.1] gi|292642016|gb|EFF60182.1| chromosome segregation protein SMC [Enterococcus faecium PC4.1] Length = 1193 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|293570731|ref|ZP_06681781.1| chromosome segregation protein SMC [Enterococcus faecium E980] gi|291609203|gb|EFF38475.1| chromosome segregation protein SMC [Enterococcus faecium E980] Length = 1193 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|227513460|ref|ZP_03943509.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus buchneri ATCC 11577] gi|227083333|gb|EEI18645.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus buchneri ATCC 11577] Length = 1183 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ + + G Sbjct: 1 MQLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVLGEQSAKNLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MPDVIFSGSADRRSLNMA 78 >gi|257893223|ref|ZP_05672876.1| chromosome partition protein SMC [Enterococcus faecium 1,231,408] gi|257896408|ref|ZP_05676061.1| chromosome partition protein SMC [Enterococcus faecium Com12] gi|257829602|gb|EEV56209.1| chromosome partition protein SMC [Enterococcus faecium 1,231,408] gi|257832973|gb|EEV59394.1| chromosome partition protein SMC [Enterococcus faecium Com12] Length = 1193 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|323340722|ref|ZP_08080974.1| cell division protein Smc [Lactobacillus ruminis ATCC 25644] gi|323091845|gb|EFZ34465.1| cell division protein Smc [Lactobacillus ruminis ATCC 25644] Length = 1180 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S F+ F + IEF D LT V G NG GKS++ E + W+ + + G Sbjct: 1 MRIKSLTLSGFKSFADKTTIEFQDGLTGVVGPNGSGKSNIIEGLRWVLGEQSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQ 108 + +T P+ RC Q Sbjct: 61 MPDVIFAGSQTRAPLN----RCMVQ 81 >gi|256544905|ref|ZP_05472276.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] gi|256399404|gb|EEU13010.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] Length = 1176 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +L +E+ F+ F KI+F + +T V G NG GKS++++AI+W+ + + G Sbjct: 2 IYIRLESVELKGFKSFANRTKIKFDNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSLRG 61 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + + PM MA Sbjct: 62 KKMDDVIFQGADDKKPMNMA 81 >gi|257899382|ref|ZP_05679035.1| chromosome partition protein SMC [Enterococcus faecium Com15] gi|257837294|gb|EEV62368.1| chromosome partition protein SMC [Enterococcus faecium Com15] Length = 1193 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|257887974|ref|ZP_05667627.1| chromosome partition protein SMC [Enterococcus faecium 1,141,733] gi|257824028|gb|EEV50960.1| chromosome partition protein SMC [Enterococcus faecium 1,141,733] Length = 1193 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|227524603|ref|ZP_03954652.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus hilgardii ATCC 8290] gi|227088278|gb|EEI23590.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus hilgardii ATCC 8290] Length = 1183 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI F+ F E KI F + +T + G NG GKS+++EAI W+ + + G Sbjct: 1 MQLKSIEIIGFKSFAEKTKISFPNGMTGIVGPNGSGKSNIAEAIRWVLGEQSAKNLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MPDVIFSGSADRRSLNMA 78 >gi|261207044|ref|ZP_05921733.1| chromosome partition protein SMC [Enterococcus faecium TC 6] gi|289565323|ref|ZP_06445773.1| chromosome segregation protein SMC [Enterococcus faecium D344SRF] gi|294614480|ref|ZP_06694395.1| chromosome segregation protein SMC [Enterococcus faecium E1636] gi|260078672|gb|EEW66374.1| chromosome partition protein SMC [Enterococcus faecium TC 6] gi|289162813|gb|EFD10663.1| chromosome segregation protein SMC [Enterococcus faecium D344SRF] gi|291592657|gb|EFF24251.1| chromosome segregation protein SMC [Enterococcus faecium E1636] Length = 1193 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|293556819|ref|ZP_06675380.1| chromosome segregation protein SMC [Enterococcus faecium E1039] gi|291600903|gb|EFF31194.1| chromosome segregation protein SMC [Enterococcus faecium E1039] Length = 1193 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|294618514|ref|ZP_06698076.1| chromosome segregation protein SMC [Enterococcus faecium E1679] gi|291595214|gb|EFF26545.1| chromosome segregation protein SMC [Enterococcus faecium E1679] Length = 1193 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|257881411|ref|ZP_05661064.1| chromosome partition protein SMC [Enterococcus faecium 1,231,502] gi|257890629|ref|ZP_05670282.1| chromosome partition protein SMC [Enterococcus faecium 1,231,410] gi|293562992|ref|ZP_06677459.1| chromosome segregation protein SMC [Enterococcus faecium E1162] gi|294621997|ref|ZP_06701141.1| chromosome segregation protein SMC [Enterococcus faecium U0317] gi|257817069|gb|EEV44397.1| chromosome partition protein SMC [Enterococcus faecium 1,231,502] gi|257826989|gb|EEV53615.1| chromosome partition protein SMC [Enterococcus faecium 1,231,410] gi|291598424|gb|EFF29497.1| chromosome segregation protein SMC [Enterococcus faecium U0317] gi|291605118|gb|EFF34585.1| chromosome segregation protein SMC [Enterococcus faecium E1162] Length = 1193 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|315127019|ref|YP_004069022.1| SMC protein [Pseudoalteromonas sp. SM9913] gi|315015533|gb|ADT68871.1| SMC protein [Pseudoalteromonas sp. SM9913] Length = 1133 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSTNRKPISQA 78 >gi|293567879|ref|ZP_06679220.1| chromosome segregation protein SMC [Enterococcus faecium E1071] gi|291589464|gb|EFF21271.1| chromosome segregation protein SMC [Enterococcus faecium E1071] Length = 1193 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|257878771|ref|ZP_05658424.1| chromosome partition protein SMC [Enterococcus faecium 1,230,933] gi|257812999|gb|EEV41757.1| chromosome partition protein SMC [Enterococcus faecium 1,230,933] Length = 1193 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|88861392|ref|ZP_01136022.1| putative SMC family protein [Pseudoalteromonas tunicata D2] gi|88816658|gb|EAR26483.1| putative SMC family protein [Pseudoalteromonas tunicata D2] Length = 1141 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSTNRKPISQA 78 >gi|69246106|ref|ZP_00603812.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Enterococcus faecium DO] gi|258615163|ref|ZP_05712933.1| chromosome partition protein SMC [Enterococcus faecium DO] gi|68195401|gb|EAN09848.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Enterococcus faecium DO] Length = 1193 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|260558339|ref|ZP_05830535.1| chromosome partition protein SMC [Enterococcus faecium C68] gi|260075513|gb|EEW63819.1| chromosome partition protein SMC [Enterococcus faecium C68] Length = 1193 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|189426540|ref|YP_001953717.1| chromosome segregation protein SMC [Geobacter lovleyi SZ] gi|189422799|gb|ACD97197.1| chromosome segregation protein SMC [Geobacter lovleyi SZ] Length = 1177 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K+ +EI+ F+ F + ++F +T V G NG GKS++ +A+ W + + G Sbjct: 1 MKIKRLEIAGFKSFADKVVLDFQQGVTGVVGPNGCGKSNIVDAMRWCMGEQSAKNLRGKA 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ MA Sbjct: 61 MEDIIFAGSDSRKPLGMA 78 >gi|171780117|ref|ZP_02921021.1| hypothetical protein STRINF_01905 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281465|gb|EDT46900.1| hypothetical protein STRINF_01905 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 1179 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + IEF +T + G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEMQGFKSFADKTTIEFDKGVTAIVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGAENRKPLNYA 78 >gi|332532504|ref|ZP_08408382.1| chromosome partition protein Smc [Pseudoalteromonas haloplanktis ANT/505] gi|332038147|gb|EGI74594.1| chromosome partition protein Smc [Pseudoalteromonas haloplanktis ANT/505] Length = 1133 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|119472553|ref|ZP_01614601.1| putative SMC family protein [Alteromonadales bacterium TW-7] gi|119444877|gb|EAW26177.1| putative SMC family protein [Alteromonadales bacterium TW-7] Length = 1134 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|77360024|ref|YP_339599.1| SMC protein [Pseudoalteromonas haloplanktis TAC125] gi|76874935|emb|CAI86156.1| putative SMC family protein [Pseudoalteromonas haloplanktis TAC125] Length = 1137 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E KI F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLSTIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|306831840|ref|ZP_07464996.1| cell division protein Smc [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426038|gb|EFM29154.1| cell division protein Smc [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 1179 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|306833963|ref|ZP_07467087.1| cell division protein Smc [Streptococcus bovis ATCC 700338] gi|304423964|gb|EFM27106.1| cell division protein Smc [Streptococcus bovis ATCC 700338] Length = 1179 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|288905743|ref|YP_003430965.1| Chromosome segregation protein SMC [Streptococcus gallolyticus UCN34] gi|325978775|ref|YP_004288491.1| chromosome partition protein smc [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732469|emb|CBI14041.1| Chromosome segregation protein SMC [Streptococcus gallolyticus UCN34] gi|325178703|emb|CBZ48747.1| chromosome partition protein smc [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 1179 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|320547231|ref|ZP_08041524.1| SMC family domain protein [Streptococcus equinus ATCC 9812] gi|320448119|gb|EFW88869.1| SMC family domain protein [Streptococcus equinus ATCC 9812] Length = 1179 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + IEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGSENRKPLNYA 78 >gi|257885679|ref|ZP_05665332.1| chromosome partition protein SMC [Enterococcus faecium 1,231,501] gi|257821535|gb|EEV48665.1| chromosome partition protein SMC [Enterococcus faecium 1,231,501] Length = 1193 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + ++F + +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADKTVVDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDIIFAGSDTRKQLNIA 78 >gi|297617463|ref|YP_003702622.1| chromosome segregation protein SMC [Syntrophothermus lipocalidus DSM 12680] gi|297145300|gb|ADI02057.1| chromosome segregation protein SMC [Syntrophothermus lipocalidus DSM 12680] Length = 1193 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F E +IEF + ++ G NG GKS++ +AI W R G Sbjct: 1 MYLKRLELKGFKSFAERTEIEFMPGVNVIVGPNGCGKSNIVDAIRWALGESNVRHLRGQR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ +A Sbjct: 61 NDDVIFSGTDKRRPLGLA 78 >gi|259503530|ref|ZP_05746432.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259168608|gb|EEW53103.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 1188 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + I F+ F I+F + +T + G NG GKS++ EAI W+ + R GD Sbjct: 1 MRLLSLTIDGFKSFANKTTIKFEEGMTGIVGPNGSGKSNIIEAIRWVMGEQSARHLRGDK 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + +P+ A+ Sbjct: 61 MVDVIFNGSAGRVPLNRAL 79 >gi|114778619|ref|ZP_01453435.1| chromosome segregation SMC protein, putative [Mariprofundus ferrooxydans PV-1] gi|114551084|gb|EAU53645.1| chromosome segregation SMC protein, putative [Mariprofundus ferrooxydans PV-1] Length = 1159 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L IE++ F+ F + +IE + +T + G NG GKS++ +A+ W+ ++ R G Sbjct: 1 MRLKRIELAGFKSFVDPTRIELGEGITAIVGPNGCGKSNIIDALRWVLGEHSARHLRGGV 60 Query: 85 -DSIKKRSIKTPMPMCM 100 D + + T P+ + Sbjct: 61 MDDLIFQGSDTRPPVSV 77 >gi|157273413|gb|ABV27312.1| chromosome segregation protein SMC [Candidatus Chloracidobacterium thermophilum] Length = 1261 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L +E+ F+ F + +I F +T + G NG GKS++ +AI W+ + R G Sbjct: 1 MLRLEKLELRGFKSFCDTTEILFHPGVTAIVGPNGCGKSNIVDAITWVLGEQSARNLRGS 60 Query: 86 SI---KKRSIKTPMPMCMA 101 + + P+ MA Sbjct: 61 KMEDVIFNGTRQRKPLGMA 79 >gi|301168368|emb|CBW27958.1| chromosome partition protein [Bacteriovorax marinus SJ] Length = 1264 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 38/72 (52%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ A+ + KL + I F+ F + I F D +T + G NG GKS++ +A+ W+ + Sbjct: 31 TFQAKDALVKLKRLVIQGFKSFKDRTTIHFDDGITGIVGPNGCGKSNIVDALFWVMGEQS 90 Query: 79 QRRKHGDSIKKR 90 + G S+K Sbjct: 91 AKHLRGKSMKDL 102 >gi|325567329|ref|ZP_08143996.1| cell division protein Smc [Enterococcus casseliflavus ATCC 12755] gi|325158762|gb|EGC70908.1| cell division protein Smc [Enterococcus casseliflavus ATCC 12755] Length = 1192 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVLGEQSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDVIFAGSDTRRALNIA 78 >gi|257876181|ref|ZP_05655834.1| chromosome partition protein SMC [Enterococcus casseliflavus EC20] gi|257810347|gb|EEV39167.1| chromosome partition protein SMC [Enterococcus casseliflavus EC20] Length = 1192 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVLGEQSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDVIFAGSDTRRALNIA 78 >gi|257866577|ref|ZP_05646230.1| chromosome partition protein SMC [Enterococcus casseliflavus EC30] gi|257872907|ref|ZP_05652560.1| chromosome partition protein SMC [Enterococcus casseliflavus EC10] gi|257800535|gb|EEV29563.1| chromosome partition protein SMC [Enterococcus casseliflavus EC30] gi|257807071|gb|EEV35893.1| chromosome partition protein SMC [Enterococcus casseliflavus EC10] Length = 1192 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MYLKRIEIAGFKSFADRTVIDFEHRVTAVVGPNGSGKSNITEAIRWVLGEQSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + +A Sbjct: 61 MPDVIFAGSDTRRALNIA 78 >gi|116873239|ref|YP_850020.1| chromosome segregation SMC protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742117|emb|CAK21241.1| chromosome segregation SMC protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|295397857|ref|ZP_06807920.1| SMC family domain protein [Aerococcus viridans ATCC 11563] gi|294973902|gb|EFG49666.1| SMC family domain protein [Aerococcus viridans ATCC 11563] Length = 1191 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + IEF + T + G NG GKS+++EAI+W+ + + G Sbjct: 1 MYLKTVEMVGFKSFADKTTIEFDNGFTAIVGPNGSGKSNITEAIKWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|310822922|ref|YP_003955280.1| Chromosome segregation protein SMC [Stigmatella aurantiaca DW4/3-1] gi|309395994|gb|ADO73453.1| Chromosome segregation protein SMC [Stigmatella aurantiaca DW4/3-1] Length = 1198 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++ ++I+ F+ F + F D +T + G NG GKS++ +AI W + + G Sbjct: 1 MRIKRLDITGFKSFMDRSVFSFDDGVTGIVGPNGCGKSNVVDAIRWAMGEQSAKNLRGRG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ MA Sbjct: 61 MEDVIFNGSESKQPLSMA 78 >gi|308050129|ref|YP_003913695.1| chromosome segregation protein SMC [Ferrimonas balearica DSM 9799] gi|307632319|gb|ADN76621.1| chromosome segregation protein SMC [Ferrimonas balearica DSM 9799] Length = 1152 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + K+ F D +T + G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKQIKLAGFKSFVDPTKVPFPDQMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MTDVIFNGSSGRKPVSVA 78 >gi|317121791|ref|YP_004101794.1| chromosome segregation protein SMC [Thermaerobacter marianensis DSM 12885] gi|315591771|gb|ADU51067.1| chromosome segregation protein SMC [Thermaerobacter marianensis DSM 12885] Length = 1184 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + ++EF +T + G NG GKS+L +A+ W+ + R+ G Sbjct: 1 MYLKRLELYGFKSFADRTRLEFGPGITAIVGPNGSGKSNLVDAVRWVLGEQSARQLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|315303705|ref|ZP_07874219.1| chromosome segregation protein SMC [Listeria ivanovii FSL F6-596] gi|313627918|gb|EFR96537.1| chromosome segregation protein SMC [Listeria ivanovii FSL F6-596] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|254852712|ref|ZP_05242060.1| chromosome segregation SMC protein [Listeria monocytogenes FSL R2-503] gi|300763883|ref|ZP_07073880.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N1-017] gi|258606033|gb|EEW18641.1| chromosome segregation SMC protein [Listeria monocytogenes FSL R2-503] gi|300515619|gb|EFK42669.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N1-017] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|254826154|ref|ZP_05231155.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-194] gi|255521157|ref|ZP_05388394.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-175] gi|293595394|gb|EFG03155.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J1-194] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|16800984|ref|NP_471252.1| hypothetical protein lin1918 [Listeria innocua Clip11262] gi|16414419|emb|CAC97148.1| smc [Listeria innocua Clip11262] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|46908035|ref|YP_014424.1| chromosome segregation SMC protein [Listeria monocytogenes serotype 4b str. F2365] gi|47093843|ref|ZP_00231587.1| chromosome segregation SMC protein [Listeria monocytogenes str. 4b H7858] gi|254933276|ref|ZP_05266635.1| chromosome segregation SMC protein [Listeria monocytogenes HPB2262] gi|46881305|gb|AAT04601.1| chromosome segregation SMC protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017784|gb|EAL08573.1| chromosome segregation SMC protein [Listeria monocytogenes str. 4b H7858] gi|293584836|gb|EFF96868.1| chromosome segregation SMC protein [Listeria monocytogenes HPB2262] gi|332312245|gb|EGJ25340.1| Cell division protein Smc [Listeria monocytogenes str. Scott A] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|217964044|ref|YP_002349722.1| chromosome segregation protein SMC [Listeria monocytogenes HCC23] gi|290893066|ref|ZP_06556055.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J2-071] gi|217333314|gb|ACK39108.1| chromosome segregation protein SMC [Listeria monocytogenes HCC23] gi|290557426|gb|EFD90951.1| chromosome segregation SMC protein [Listeria monocytogenes FSL J2-071] gi|307571386|emb|CAR84565.1| chromosome condensation and segregation protein [Listeria monocytogenes L99] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|226224407|ref|YP_002758514.1| Smc protein [Listeria monocytogenes Clip81459] gi|225876869|emb|CAS05578.1| Putative Smc protein [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1186 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|302392423|ref|YP_003828243.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] gi|302204500|gb|ADL13178.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] Length = 1188 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F E K+EF ++T V G NG GKS++++AI W+ + + G Sbjct: 1 MHLKKIEMHGFKSFAEEVKVEFEPNITAVLGPNGSGKSNIADAIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM +A Sbjct: 61 MEDVIFAGSSQRKPMGIA 78 >gi|313623279|gb|EFR93522.1| chromosome segregation protein SMC [Listeria innocua FSL J1-023] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|313618315|gb|EFR90362.1| chromosome segregation protein SMC [Listeria innocua FSL S4-378] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|284802250|ref|YP_003414115.1| hypothetical protein LM5578_2006 [Listeria monocytogenes 08-5578] gi|284995392|ref|YP_003417160.1| hypothetical protein LM5923_1957 [Listeria monocytogenes 08-5923] gi|284057812|gb|ADB68753.1| hypothetical protein LM5578_2006 [Listeria monocytogenes 08-5578] gi|284060859|gb|ADB71798.1| hypothetical protein LM5923_1957 [Listeria monocytogenes 08-5923] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|224500034|ref|ZP_03668383.1| hypothetical protein LmonF1_10304 [Listeria monocytogenes Finland 1988] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|47097387|ref|ZP_00234938.1| chromosome segregation SMC protein [Listeria monocytogenes str. 1/2a F6854] gi|254831595|ref|ZP_05236250.1| hypothetical protein Lmon1_09588 [Listeria monocytogenes 10403S] gi|254899499|ref|ZP_05259423.1| hypothetical protein LmonJ_06784 [Listeria monocytogenes J0161] gi|254912362|ref|ZP_05262374.1| chromosome segregation SMC protein [Listeria monocytogenes J2818] gi|254936689|ref|ZP_05268386.1| chromosome segregation SMC protein [Listeria monocytogenes F6900] gi|47014235|gb|EAL05217.1| chromosome segregation SMC protein [Listeria monocytogenes str. 1/2a F6854] gi|258609285|gb|EEW21893.1| chromosome segregation SMC protein [Listeria monocytogenes F6900] gi|293590343|gb|EFF98677.1| chromosome segregation SMC protein [Listeria monocytogenes J2818] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|16803844|ref|NP_465329.1| hypothetical protein lmo1804 [Listeria monocytogenes EGD-e] gi|224501395|ref|ZP_03669702.1| hypothetical protein LmonFR_02550 [Listeria monocytogenes FSL R2-561] gi|16411258|emb|CAC99882.1| smc [Listeria monocytogenes EGD-e] Length = 1186 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|85712484|ref|ZP_01043533.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] gi|85693762|gb|EAQ31711.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] Length = 581 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + K+ F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKHIKLAGFKSFVDATKVPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSQARKPVSQA 78 >gi|311029997|ref|ZP_07708087.1| chromosome segregation SMC protein [Bacillus sp. m3-13] Length = 1188 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F E ++F +T V G NG GKS++ +AI W+ + + G Sbjct: 1 MYLKRLEVVGFKSFAEKISVDFVPGVTAVVGPNGSGKSNIIDAIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + MA Sbjct: 61 MEDIIFAGSDSRRALNMA 78 >gi|332298201|ref|YP_004440123.1| chromosome segregation protein SMC [Treponema brennaborense DSM 12168] gi|332181304|gb|AEE16992.1| chromosome segregation protein SMC [Treponema brennaborense DSM 12168] Length = 977 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + +IEF+D +T + G NG GKS++ +A++W+ + + Sbjct: 1 MFLKSLEVFGFKSFADRTRIEFSDGITALLGPNGCGKSNVVDAVKWVLGEQGAKNMRAEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ +A Sbjct: 61 MEDVIFNGTETRKPLNVA 78 >gi|171914180|ref|ZP_02929650.1| Chromosome segregation protein SMC [Verrucomicrobium spinosum DSM 4136] Length = 1328 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + EF +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MYLKSLEIHGFKSFADKTLFEFHTGVTGIVGPNGCGKSNVVDAIRWVLGETSAKALRGAE 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MADVIFNGTDKRKPVGMA 78 >gi|317129237|ref|YP_004095519.1| chromosome segregation protein SMC [Bacillus cellulosilyticus DSM 2522] gi|315474185|gb|ADU30788.1| chromosome segregation protein SMC [Bacillus cellulosilyticus DSM 2522] Length = 1189 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E I+F +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MFLKRLDLVGFKSFAERLSIDFVKGVTAVVGPNGSGKSNISDAIRWVLGEQSAKNLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ MA Sbjct: 61 MEDVIFSGSDSRKPLNMA 78 >gi|78222390|ref|YP_384137.1| condensin subunit Smc [Geobacter metallireducens GS-15] gi|78193645|gb|ABB31412.1| condensin subunit Smc [Geobacter metallireducens GS-15] Length = 1176 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++IS F+ F + ++F +T + G NG GKS++ +AI W+ + + G S Sbjct: 1 MKIKRLDISGFKSFVDKVSLDFQQGITSIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKS 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ ++ P+ MA Sbjct: 61 MEDIIFGGSESRKPLGMA 78 >gi|258611594|ref|ZP_05711569.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N3-165] gi|258601612|gb|EEW14937.1| chromosome segregation SMC protein [Listeria monocytogenes FSL N3-165] Length = 604 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MGDVIFAGSDTRKPINFA 78 >gi|313901968|ref|ZP_07835384.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] gi|313467757|gb|EFR63255.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] Length = 1242 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + ++EF +T + G NG GKS+L +A+ W+ + R+ G Sbjct: 1 MYLKRLELYGFKSFADRTRLEFGPGITAIVGPNGSGKSNLVDAVRWVLGEQSARQLRGSR 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|119774651|ref|YP_927391.1| SMC family protein [Shewanella amazonensis SB2B] gi|119767151|gb|ABL99721.1| SMC family protein [Shewanella amazonensis SB2B] Length = 1139 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + +I F + LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTRIPFPNPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MTDVIFNGSSARRPVSVA 78 >gi|56460803|ref|YP_156084.1| chromosome segregation ATPase, sms [Idiomarina loihiensis L2TR] gi|56179813|gb|AAV82535.1| Chromosome segregation ATPase, sms [Idiomarina loihiensis L2TR] Length = 1152 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++ F+ F + K+ F D +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKHIKLVGFKSFVDPTKVPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MSDVIFNGSSARKPVSQA 78 >gi|300172911|ref|YP_003772076.1| chromosome partition protein [Leuconostoc gasicomitatum LMG 18811] gi|299887289|emb|CBL91257.1| Chromosome partition protein [Leuconostoc gasicomitatum LMG 18811] Length = 1184 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTIIEFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|323342052|ref|ZP_08082285.1| hypothetical protein HMPREF0357_10465 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464477|gb|EFY09670.1| hypothetical protein HMPREF0357_10465 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 978 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I F D +T + G NG GKS++S+AI W+ + + G S Sbjct: 5 MFLKKIEMQGFKSFADKVVINFDDAVTGIVGPNGCGKSNISDAIRWVLGEQSVKSMRGSS 64 Query: 87 I---KKRSIKTPMPMCMA 101 + +T + +A Sbjct: 65 MTDVIFNGSETRRKVNLA 82 >gi|320535949|ref|ZP_08036014.1| segregation protein SMC [Treponema phagedenis F0421] gi|320147200|gb|EFW38751.1| segregation protein SMC [Treponema phagedenis F0421] Length = 1028 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + +IEF++ +T + G NG GKS++ +AI+W+ + + D Sbjct: 1 MFLKSLEIFGFKSFADRTRIEFSEGITALLGPNGCGKSNVVDAIKWVLGEQSPKTLRADK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ +A Sbjct: 61 MEDVIFNGTETRKPLNVA 78 >gi|332306123|ref|YP_004433974.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173452|gb|AEE22706.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1164 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I F D +T + G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKKIKLAGFKSFVDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK-----RSIKTPMPMC 99 + S + P+ C Sbjct: 61 MIDVIFNGSSARKPVSQC 78 >gi|312869939|ref|ZP_07730078.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] gi|311094524|gb|EFQ52829.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] Length = 1188 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + I F+ F I+F + +T + G NG GKS++ EAI W+ + R GD Sbjct: 1 MQLLSLTIDGFKSFANKTTIKFEEGMTGIVGPNGSGKSNIIEAIRWVMGEQSARHLRGDK 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + P+ A+ Sbjct: 61 MVDVIFNGAANRAPLNRAL 79 >gi|283769400|ref|ZP_06342299.1| chromosome segregation protein SMC [Bulleidia extructa W1219] gi|283104057|gb|EFC05441.1| chromosome segregation protein SMC [Bulleidia extructa W1219] Length = 977 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + IEF +T + G NG GKS++++AI W+ + + GD Sbjct: 1 MFLKRVEMQGFKSFADKTVIEFNHPITGIVGPNGCGKSNITDAIRWVLGEQSAKSMRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + +A Sbjct: 61 MNDVIFAGSANRRKVNLA 78 >gi|227530553|ref|ZP_03960602.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] gi|227349559|gb|EEJ39850.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] Length = 1187 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + + F+ F + I+F +T + G NG GKS++ EAI W+ + + GD Sbjct: 1 MQLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAHQLRGDK 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + P+ A+ Sbjct: 61 MADVIFNGSSDRKPLNRAL 79 >gi|295399781|ref|ZP_06809762.1| chromosome segregation protein SMC [Geobacillus thermoglucosidasius C56-YS93] gi|294978184|gb|EFG53781.1| chromosome segregation protein SMC [Geobacillus thermoglucosidasius C56-YS93] Length = 1187 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MEDIIFAGSDSRKPLNVA 78 >gi|312111707|ref|YP_003990023.1| chromosome segregation protein SMC [Geobacillus sp. Y4.1MC1] gi|311216808|gb|ADP75412.1| chromosome segregation protein SMC [Geobacillus sp. Y4.1MC1] Length = 1187 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MEDIIFAGSDSRKPLNVA 78 >gi|239826586|ref|YP_002949210.1| chromosome segregation protein SMC [Geobacillus sp. WCH70] gi|239806879|gb|ACS23944.1| chromosome segregation protein SMC [Geobacillus sp. WCH70] Length = 1187 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDIIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MEDIIFAGSDSRKPLNVA 78 >gi|327183817|gb|AEA32264.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1118] Length = 1189 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|325957094|ref|YP_004292506.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC] gi|325333659|gb|ADZ07567.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC] Length = 1189 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|326693699|ref|ZP_08230704.1| chromosome partition protein [Leuconostoc argentinum KCTC 3773] Length = 1184 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|296111746|ref|YP_003622128.1| cell division protein Smc [Leuconostoc kimchii IMSNU 11154] gi|295833278|gb|ADG41159.1| cell division protein Smc [Leuconostoc kimchii IMSNU 11154] Length = 1184 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|21902529|ref|NP_663774.1| Bartomin [Rattus norvegicus] gi|21717411|dbj|BAC02935.1| barmotin [Rattus norvegicus] Length = 1184 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IEF +T + G NG GKS++ EAI W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTVIEFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|315038613|ref|YP_004032181.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1112] gi|312276746|gb|ADQ59386.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL 1112] Length = 1189 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F E I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFAEKTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|319938299|ref|ZP_08012696.1| chromosome segregation ATPase [Coprobacillus sp. 29_1] gi|319806592|gb|EFW03250.1| chromosome segregation ATPase [Coprobacillus sp. 29_1] Length = 981 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + IEF +T + G NG GKS++S+A+ W+ + + G + Sbjct: 1 MHLKRIELHGFKSFADKSVIEFQPGITGIVGPNGCGKSNISDAVRWVLGEQSVKSLRGSN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P +A Sbjct: 61 MADVIFNGSEDRKPQSLA 78 >gi|290889933|ref|ZP_06553020.1| hypothetical protein AWRIB429_0410 [Oenococcus oeni AWRIB429] gi|290480543|gb|EFD89180.1| hypothetical protein AWRIB429_0410 [Oenococcus oeni AWRIB429] Length = 1184 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G++ Sbjct: 1 MKLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNT 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|116490532|ref|YP_810076.1| condensin subunit Smc [Oenococcus oeni PSU-1] gi|116091257|gb|ABJ56411.1| condensin subunit Smc [Oenococcus oeni PSU-1] Length = 1184 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G++ Sbjct: 1 MKLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNT 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|312984415|ref|ZP_07791750.1| cell division protein Smc [Lactobacillus crispatus CTV-05] gi|310894190|gb|EFQ43277.1| cell division protein Smc [Lactobacillus crispatus CTV-05] Length = 1189 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNKA 78 >gi|295693171|ref|YP_003601781.1| chromosome segregation protein smc [Lactobacillus crispatus ST1] gi|295031277|emb|CBL50756.1| Chromosome segregation protein Smc [Lactobacillus crispatus ST1] Length = 1189 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNKA 78 >gi|118587505|ref|ZP_01544929.1| chromosome segregation SMC protein [Oenococcus oeni ATCC BAA-1163] gi|118431956|gb|EAV38698.1| chromosome segregation SMC protein [Oenococcus oeni ATCC BAA-1163] Length = 1184 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI+ F+ F + I+F +T + G NG GKS++ EAI W+ + + G++ Sbjct: 1 MKLKSLEINGFKSFADKTVIDFMPGMTGIVGPNGSGKSNIIEAIRWVMGEQSAKGLRGNT 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|32474054|ref|NP_867048.1| chromosome partition protein Smc [Rhodopirellula baltica SH 1] gi|32444591|emb|CAD74592.1| chromosome partition protein Smc [Rhodopirellula baltica SH 1] Length = 1234 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F L +E++ F+ F + + +F D +T+V G NG GKS++ +A++W+ + + G Sbjct: 42 FMLKALELAGFKSFADRTRFDFPDGITVVVGPNGSGKSNIVDAMKWVLGSQSAKSLRGKD 101 Query: 87 I---KKRSIKTPMPMCMA 101 + + +T P A Sbjct: 102 MSDVIFKGSQTRGPAGAA 119 >gi|260588639|ref|ZP_05854552.1| putative cell division protein Smc [Blautia hansenii DSM 20583] gi|331082010|ref|ZP_08331138.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 6_1_63FAA] gi|260541114|gb|EEX21683.1| putative cell division protein Smc [Blautia hansenii DSM 20583] gi|330405605|gb|EGG85135.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 6_1_63FAA] Length = 1186 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKITFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ +T P+ A Sbjct: 61 MQDVIFSGTETRKPLGFA 78 >gi|257066165|ref|YP_003152421.1| SMC domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798045|gb|ACV28700.1| SMC domain protein [Anaerococcus prevotii DSM 20548] Length = 1172 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++E+ F+ F + KIEF + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MRLENVELKGFKSFADRTKIEFDEKITAVVGPNGSGKSNISDAVRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + ++ + +A Sbjct: 61 MNDVIFQGGESSKSLNLA 78 >gi|227878859|ref|ZP_03996765.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01] gi|256843376|ref|ZP_05548864.1| chromosome segregation protein SMC [Lactobacillus crispatus 125-2-CHN] gi|256849802|ref|ZP_05555233.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US] gi|262046953|ref|ZP_06019913.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US] gi|227861550|gb|EEJ69163.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01] gi|256614796|gb|EEU19997.1| chromosome segregation protein SMC [Lactobacillus crispatus 125-2-CHN] gi|256713291|gb|EEU28281.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US] gi|260572935|gb|EEX29495.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US] Length = 1189 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNKA 78 >gi|329667083|gb|AEB93031.1| chromosome partitioning protein Smc [Lactobacillus johnsonii DPC 6026] Length = 1186 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|116629438|ref|YP_814610.1| chromosome segregation ATPase [Lactobacillus gasseri ATCC 33323] gi|282850852|ref|ZP_06260226.1| chromosome segregation protein SMC [Lactobacillus gasseri 224-1] gi|311110914|ref|ZP_07712311.1| cell division protein Smc [Lactobacillus gasseri MV-22] gi|116095020|gb|ABJ60172.1| condensin subunit Smc [Lactobacillus gasseri ATCC 33323] gi|282557804|gb|EFB63392.1| chromosome segregation protein SMC [Lactobacillus gasseri 224-1] gi|311066068|gb|EFQ46408.1| cell division protein Smc [Lactobacillus gasseri MV-22] Length = 1186 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|109898094|ref|YP_661349.1| chromosome segregation protein SMC [Pseudoalteromonas atlantica T6c] gi|109700375|gb|ABG40295.1| chromosome segregation protein SMC [Pseudoalteromonas atlantica T6c] Length = 1164 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I F D +T + G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKKIKLAGFKSFVDPTSIPFVDDMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MID 63 >gi|42519392|ref|NP_965322.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC 533] gi|41583680|gb|AAS09288.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC 533] Length = 1186 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|238852588|ref|ZP_04642998.1| chromosome segregation protein SMC [Lactobacillus gasseri 202-4] gi|238834734|gb|EEQ26961.1| chromosome segregation protein SMC [Lactobacillus gasseri 202-4] Length = 1186 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|212639594|ref|YP_002316114.1| chromosome segregation ATPase [Anoxybacillus flavithermus WK1] gi|212561074|gb|ACJ34129.1| Chromosome segregation ATPase [Anoxybacillus flavithermus WK1] Length = 1186 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E F+ F + I+F +T + G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEAIGFKSFADRISIDFVPGMTAIVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ +A Sbjct: 61 MEDVIFSGSESRKPLNVA 78 >gi|227550769|ref|ZP_03980818.1| chromosome segregation protein Smc [Enterococcus faecium TX1330] gi|227180087|gb|EEI61059.1| chromosome segregation protein Smc [Enterococcus faecium TX1330] Length = 1191 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 + IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G + Sbjct: 1 MKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGKMP 60 Query: 88 --KKRSIKTPMPMCMA 101 T + +A Sbjct: 61 DIIFAGSDTRKQLNIA 76 >gi|39996232|ref|NP_952183.1| chromosome segregation SMC protein [Geobacter sulfurreducens PCA] gi|28375553|emb|CAD66600.1| SMC protein [Geobacter sulfurreducens] gi|39983112|gb|AAR34506.1| chromosome segregation SMC protein, putative [Geobacter sulfurreducens PCA] gi|298505244|gb|ADI83967.1| chromosome segregation ATPase SMC [Geobacter sulfurreducens KN400] Length = 1175 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++I F+ F + +F +T + G NG GKS++ +AI W + + G S Sbjct: 1 MKIKRLDIVGFKSFVDKVSFDFQQGITGIVGPNGCGKSNVVDAIRWAMGEQSAKNLRGRS 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ + P+ MA Sbjct: 61 MEDIIFGGSEFRKPLGMA 78 >gi|297584009|ref|YP_003699789.1| chromosome segregation protein SMC [Bacillus selenitireducens MLS10] gi|297142466|gb|ADH99223.1| chromosome segregation protein SMC [Bacillus selenitireducens MLS10] Length = 1188 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E++ F+ F E I+F +T V G NG GKS++S+AI W+ + R G Sbjct: 1 MFLKRLELTGFKSFAEKLGIDFVPGVTAVVGPNGSGKSNISDAIRWVLGEQSARNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + MA Sbjct: 61 MEDVIFSGSDKRKALNMA 78 >gi|319939365|ref|ZP_08013725.1| chromosome segregation protein SMC [Streptococcus anginosus 1_2_62CV] gi|319811351|gb|EFW07646.1| chromosome segregation protein SMC [Streptococcus anginosus 1_2_62CV] Length = 1177 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVIFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|315221418|ref|ZP_07863339.1| segregation protein SMC [Streptococcus anginosus F0211] gi|315189537|gb|EFU23231.1| segregation protein SMC [Streptococcus anginosus F0211] Length = 1177 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVIFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|268319231|ref|YP_003292887.1| chromosome partitioning protein Smc [Lactobacillus johnsonii FI9785] gi|262397606|emb|CAX66620.1| chromosome partitioning protein Smc [Lactobacillus johnsonii FI9785] Length = 1186 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|227890257|ref|ZP_04008062.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC 33200] gi|227849071|gb|EEJ59157.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC 33200] Length = 1186 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|169350201|ref|ZP_02867139.1| hypothetical protein CLOSPI_00945 [Clostridium spiroforme DSM 1552] gi|169292984|gb|EDS75117.1| hypothetical protein CLOSPI_00945 [Clostridium spiroforme DSM 1552] Length = 981 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + IEF +T + G NG GKS++++AI W+ + + G S Sbjct: 1 MYLKRIELHGFKSFADKVNIEFQPGITGIVGPNGCGKSNVADAIRWVLGEQSVKSLRGSS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + +A Sbjct: 61 MSDVIFAGSEDRRAQNLA 78 >gi|289435147|ref|YP_003465019.1| chromosome segregation protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171391|emb|CBH27935.1| chromosome segregation protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1186 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + I+F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MGDVIFAGSDSRKPINFA 78 >gi|314948018|ref|ZP_07851422.1| segregation protein SMC [Enterococcus faecium TX0082] gi|313645616|gb|EFS10196.1| segregation protein SMC [Enterococcus faecium TX0082] Length = 1191 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 + IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G + Sbjct: 1 MKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGKMP 60 Query: 88 --KKRSIKTPMPMCMA 101 T + +A Sbjct: 61 DIIFAGSDTRKQLNIA 76 >gi|314937655|ref|ZP_07844981.1| segregation protein SMC [Enterococcus faecium TX0133a04] gi|314942846|ref|ZP_07849659.1| segregation protein SMC [Enterococcus faecium TX0133C] gi|314950936|ref|ZP_07854005.1| segregation protein SMC [Enterococcus faecium TX0133A] gi|314991416|ref|ZP_07856893.1| segregation protein SMC [Enterococcus faecium TX0133B] gi|314995063|ref|ZP_07860183.1| segregation protein SMC [Enterococcus faecium TX0133a01] gi|313590789|gb|EFR69634.1| segregation protein SMC [Enterococcus faecium TX0133a01] gi|313593896|gb|EFR72741.1| segregation protein SMC [Enterococcus faecium TX0133B] gi|313596945|gb|EFR75790.1| segregation protein SMC [Enterococcus faecium TX0133A] gi|313598318|gb|EFR77163.1| segregation protein SMC [Enterococcus faecium TX0133C] gi|313643032|gb|EFS07612.1| segregation protein SMC [Enterococcus faecium TX0133a04] Length = 1191 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 + IEI+ F+ F + I+F + +T V G NG GKS+++EAI W+ + + G + Sbjct: 1 MKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGKMP 60 Query: 88 --KKRSIKTPMPMCMA 101 T + +A Sbjct: 61 DIIFAGSDTRKQLNIA 76 >gi|293381176|ref|ZP_06627184.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus 214-1] gi|290922216|gb|EFD99210.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus 214-1] Length = 847 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EA+ W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTTIHFDDGITGIVGPNGSGKSNITEAVRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNKA 78 >gi|323126810|gb|ADX24107.1| Putative chromosome segregation SMC [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 1181 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRSPLNYA 78 >gi|322411351|gb|EFY02259.1| putative chromosome segregation SMC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1181 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRSPLNYA 78 >gi|262282632|ref|ZP_06060400.1| chromosome segregation protein SMC [Streptococcus sp. 2_1_36FAA] gi|262261923|gb|EEY80621.1| chromosome segregation protein SMC [Streptococcus sp. 2_1_36FAA] Length = 1177 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|251781987|ref|YP_002996289.1| chromosome partition protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390616|dbj|BAH81075.1| chromosome partition protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 1181 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRSPLNYA 78 >gi|299821774|ref|ZP_07053662.1| cell division protein Smc [Listeria grayi DSM 20601] gi|299817439|gb|EFI84675.1| cell division protein Smc [Listeria grayi DSM 20601] Length = 1185 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + ++F +T V G NG GKS+++EAI W+ + + G Sbjct: 1 MLLKKLEMNGFKSFADKVTVDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MGDVIFAGSDSRKPINFA 78 >gi|300361932|ref|ZP_07058109.1| chromosome segregation protein Smc [Lactobacillus gasseri JV-V03] gi|300354551|gb|EFJ70422.1| chromosome segregation protein Smc [Lactobacillus gasseri JV-V03] Length = 1186 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F + +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLQQLVLNGFKSFADKTTIRFNNGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQMRAPMNHA 78 >gi|255281053|ref|ZP_05345608.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] gi|255268501|gb|EET61706.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] Length = 713 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ + ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKMKFQFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLGFA 78 >gi|319946573|ref|ZP_08020807.1| SMC family domain protein [Streptococcus australis ATCC 700641] gi|319746621|gb|EFV98880.1| SMC family domain protein [Streptococcus australis ATCC 700641] Length = 1181 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTRVIFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|170727193|ref|YP_001761219.1| chromosome segregation protein SMC [Shewanella woodyi ATCC 51908] gi|169812540|gb|ACA87124.1| chromosome segregation protein SMC [Shewanella woodyi ATCC 51908] Length = 1133 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F + LT V G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLNPLTAVIGPNGCGKSNIIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|291519530|emb|CBK74751.1| RecF/RecN/SMC N terminal domain [Butyrivibrio fibrisolvens 16/4] Length = 221 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ + ++ G S Sbjct: 1 MYLKSIELYGFKSFAHKMKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTEARKPLSYA 78 >gi|325685924|gb|EGD27989.1| cell division protein Smc [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 1186 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNRA 78 >gi|325126040|gb|ADY85370.1| Chromosome segregation protein Smc [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 1186 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNRA 78 >gi|300811714|ref|ZP_07092188.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497290|gb|EFK32338.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 1186 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNRA 78 >gi|116514342|ref|YP_813248.1| chromosome segregation ATPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093657|gb|ABJ58810.1| condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 1186 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQFRKPLNRA 78 >gi|170017642|ref|YP_001728561.1| Barmotin [Leuconostoc citreum KM20] gi|169804499|gb|ACA83117.1| Barmotin [Leuconostoc citreum KM20] Length = 1184 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IEF +T + G NG GKS++ EA+ W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTIIEFMPGMTGIVGPNGSGKSNIIEAMRWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|81428323|ref|YP_395323.1| chromosome seggregation Smc protein [Lactobacillus sakei subsp. sakei 23K] gi|78609965|emb|CAI55012.1| Chromosome seggregation Smc protein [Lactobacillus sakei subsp. sakei 23K] Length = 1186 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + +S F+ F + +I F+D LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MQLKSLVLSGFKSFADKTEINFSDGLTGIVGPNGSGKSNITEAIRWAMGEQSAKSLRGEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + M A Sbjct: 61 MPDIIFAGTDLRPQMNRA 78 >gi|226313208|ref|YP_002773102.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599] gi|226096156|dbj|BAH44598.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599] Length = 1190 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E++ F+ F + ++EF +T V G NG GKS++S++I W+ + + G Sbjct: 1 MYLKRLELAGFKSFADRTELEFVPGVTAVVGPNGSGKSNVSDSIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I P+ A Sbjct: 61 MEDIIFAGSDKRKPVNFA 78 >gi|297530631|ref|YP_003671906.1| chromosome segregation protein SMC [Geobacillus sp. C56-T3] gi|297253883|gb|ADI27329.1| chromosome segregation protein SMC [Geobacillus sp. C56-T3] Length = 1187 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ +A Sbjct: 61 MEDVIFAGSESRKPLNVA 78 >gi|261419392|ref|YP_003253074.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC61] gi|319766207|ref|YP_004131708.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC52] gi|261375849|gb|ACX78592.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC61] gi|317111073|gb|ADU93565.1| chromosome segregation protein SMC [Geobacillus sp. Y412MC52] Length = 1187 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ +A Sbjct: 61 MEDVIFAGSESRKPLNVA 78 >gi|28375551|emb|CAD66599.1| SMC protein [Geobacillus stearothermophilus] Length = 1187 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ +A Sbjct: 61 MEDVIFAGSESRKPLNVA 78 >gi|56419728|ref|YP_147046.1| chromosome segregation ATPase [Geobacillus kaustophilus HTA426] gi|56379570|dbj|BAD75478.1| chromosome segregation ATPase (SMC) [Geobacillus kaustophilus HTA426] Length = 1187 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + IEF +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIEFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ P+ +A Sbjct: 61 MEDVIFAGSESRKPLNVA 78 >gi|304312654|ref|YP_003812252.1| Chromosome segregation ATPase [gamma proteobacterium HdN1] gi|301798387|emb|CBL46611.1| Chromosome segregation ATPase [gamma proteobacterium HdN1] Length = 1166 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+I+ F+ F + I F D+LT V G NG GKS+ +A+ W+ + + G+S Sbjct: 1 MRLKSIKIAGFKSFVDPTHITFPDNLTAVVGPNGCGKSNTIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P A Sbjct: 61 MADVIFNGSSTRKPTVQA 78 >gi|125624542|ref|YP_001033025.1| chromosome segregation protein smc [Lactococcus lactis subsp. cremoris MG1363] gi|124493350|emb|CAL98324.1| chromosome segregation protein smc [Lactococcus lactis subsp. cremoris MG1363] gi|300071336|gb|ADJ60736.1| chromosome segregation protein SMC [Lactococcus lactis subsp. cremoris NZ9000] Length = 1174 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRRALNYA 78 >gi|325837634|ref|ZP_08166481.1| chromosome segregation protein SMC [Turicibacter sp. HGF1] gi|325490936|gb|EGC93235.1| chromosome segregation protein SMC [Turicibacter sp. HGF1] Length = 1191 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE F+ F + +EF +T V G NG GKS++S++I W+ + + G Sbjct: 1 MYLKRIETIGFKSFADKTVVEFERGVTAVVGPNGSGKSNISDSIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T P+ A Sbjct: 61 MEDIIFAGTSTRKPLNFA 78 >gi|319744743|gb|EFV97085.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus agalactiae ATCC 13813] Length = 1179 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKVEFDQGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|293374744|ref|ZP_06621052.1| chromosome segregation protein SMC [Turicibacter sanguinis PC909] gi|292646658|gb|EFF64660.1| chromosome segregation protein SMC [Turicibacter sanguinis PC909] Length = 1191 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE F+ F + +EF +T V G NG GKS++S++I W+ + + G Sbjct: 1 MYLKRIETIGFKSFADKTVVEFERGVTAVVGPNGSGKSNISDSIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T P+ A Sbjct: 61 MEDIIFAGTSTRKPLNFA 78 >gi|127513307|ref|YP_001094504.1| chromosome segregation protein SMC [Shewanella loihica PV-4] gi|126638602|gb|ABO24245.1| chromosome segregation protein SMC [Shewanella loihica PV-4] Length = 1141 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F ++ KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLTQIKLAGFKSFVDVTKIPFNQPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARRPVSVA 78 >gi|326406355|gb|ADZ63426.1| chromosome segregation SMC protein [Lactococcus lactis subsp. lactis CV56] Length = 1174 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRRALNYA 78 >gi|281491299|ref|YP_003353279.1| chromosome partition protein Smc [Lactococcus lactis subsp. lactis KF147] gi|281375040|gb|ADA64558.1| Chromosome partition protein Smc [Lactococcus lactis subsp. lactis KF147] Length = 1174 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRRALNYA 78 >gi|253578968|ref|ZP_04856239.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849911|gb|EES77870.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 243 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + R G + Sbjct: 1 MYLKNIEVQGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSARSLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ +T P+ A Sbjct: 61 MQDVIFSGTETRKPLGYA 78 >gi|22536888|ref|NP_687739.1| chromosome segregation SMC protein [Streptococcus agalactiae 2603V/R] gi|25010801|ref|NP_735196.1| hypothetical protein gbs0746 [Streptococcus agalactiae NEM316] gi|76787222|ref|YP_329472.1| chromosome segregation protein SMC [Streptococcus agalactiae A909] gi|22533738|gb|AAM99611.1|AE014224_14 chromosome segregation SMC protein [Streptococcus agalactiae 2603V/R] gi|23095155|emb|CAD46390.1| Unknown [Streptococcus agalactiae NEM316] gi|76562279|gb|ABA44863.1| chromosome segregation protein SMC [Streptococcus agalactiae A909] Length = 1179 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKVEFDQGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|24379903|ref|NP_721858.1| putative chromosome segregation ATPase; SMC protein [Streptococcus mutans UA159] gi|24377881|gb|AAN59164.1|AE014983_5 putative chromosome segregation ATPase; SMC protein [Streptococcus mutans UA159] Length = 1178 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKVEFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|222152724|ref|YP_002561901.1| chromosome partition protein [Streptococcus uberis 0140J] gi|222113537|emb|CAR41328.1| putative chromosome partition protein [Streptococcus uberis 0140J] Length = 1181 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKTIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDIIFAGTESRNALNFA 78 >gi|15615050|ref|NP_243353.1| chromosome segregation SMC protein [Bacillus halodurans C-125] gi|10175107|dbj|BAB06206.1| chromosome segregation SMC protein [Bacillus halodurans C-125] Length = 1188 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F E +EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRLEIVGFKSFAEQMTVEFVKGVTAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGSK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDIIFAGSDTRKPLNFA 78 >gi|16506809|gb|AAL23959.1|AF426167_1 SMC protein [Lactococcus lactis] gi|16030073|emb|CAC93883.1| SMC protein [Lactococcus lactis subsp. lactis] Length = 1174 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRRALNYA 78 >gi|313885017|ref|ZP_07818769.1| chromosome segregation protein SMC [Eremococcus coleocola ACS-139-V-Col8] gi|312619708|gb|EFR31145.1| chromosome segregation protein SMC [Eremococcus coleocola ACS-139-V-Col8] Length = 1191 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F + IEF +T V G NG GKS+LSEAI W+ + + G Sbjct: 1 MHLSRVEMTGFKSFADKTVIEFDQGMTAVVGPNGSGKSNLSEAIRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|227892634|ref|ZP_04010439.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM 16047] gi|227865566|gb|EEJ72987.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM 16047] Length = 1189 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTIIHFNDGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|327538714|gb|EGF25364.1| chromosome partition protein Smc [Rhodopirellula baltica WH47] Length = 1192 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L +E++ F+ F + + +F D +T+V G NG GKS++ +A++W+ + + G + Sbjct: 2 LKALELAGFKSFADRTRFDFPDGITVVVGPNGSGKSNIVDAMKWVLGSQSAKSLRGKDMS 61 Query: 88 --KKRSIKTPMPMCMA 101 + +T P A Sbjct: 62 DVIFKGSQTRGPAGAA 77 >gi|295425202|ref|ZP_06817905.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664] gi|295064978|gb|EFG55883.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664] Length = 1188 Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ I F+ F E I F +T + G NG GKS+++EAI W + GD+ Sbjct: 1 MPLTELVIDGFKSFAEKTTIHFGSGITGIVGPNGSGKSNITEAIRWAMGESRAKTLRGDN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSEFRKPLNSA 78 >gi|94499337|ref|ZP_01305875.1| hypothetical protein RED65_11124 [Oceanobacter sp. RED65] gi|94428969|gb|EAT13941.1| hypothetical protein RED65_11124 [Oceanobacter sp. RED65] Length = 1165 Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F +LT + G NG GKS+ +A+ W+ + + GD+ Sbjct: 1 MRLKSIKLAGFKSFVDPTKIPFPTNLTCIVGPNGCGKSNTIDAVRWVMGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|260101400|ref|ZP_05751637.1| cell division protein Smc [Lactobacillus helveticus DSM 20075] gi|260084740|gb|EEW68860.1| cell division protein Smc [Lactobacillus helveticus DSM 20075] Length = 1189 Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGMN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|167756879|ref|ZP_02429006.1| hypothetical protein CLORAM_02428 [Clostridium ramosum DSM 1402] gi|167703054|gb|EDS17633.1| hypothetical protein CLORAM_02428 [Clostridium ramosum DSM 1402] Length = 981 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + +EF +T + G NG GKS++S+A+ W+ + + G + Sbjct: 1 MYLKRIELHGFKSFADKVNVEFQPGITGIVGPNGCGKSNISDAVRWVLGEQSVKSLRGAN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + +A Sbjct: 61 MSDVIFAGSEDRRAQNLA 78 >gi|290580117|ref|YP_003484509.1| putative chromosome segregation ATPase [Streptococcus mutans NN2025] gi|254997016|dbj|BAH87617.1| putative chromosome segregation ATPase [Streptococcus mutans NN2025] Length = 1178 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + K+EF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTKVEFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTEKRKPLNYA 78 >gi|332992912|gb|AEF02967.1| chromosome segregation ATPase [Alteromonas sp. SN2] Length = 1155 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I F + +T V G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKKIKLAGFKSFVDPTTIPFPNEMTAVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|237734589|ref|ZP_04565070.1| chromosome segregation ATPase [Mollicutes bacterium D7] gi|229382409|gb|EEO32500.1| chromosome segregation ATPase [Coprobacillus sp. D7] Length = 981 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + +EF +T + G NG GKS++S+A+ W+ + + G + Sbjct: 1 MYLKRIELHGFKSFADKVNVEFQPGITGIVGPNGCGKSNISDAVRWVLGEQSVKSLRGAN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + +A Sbjct: 61 MSDVIFAGSEDRRAQNLA 78 >gi|139474236|ref|YP_001128952.1| chromosome partition protein [Streptococcus pyogenes str. Manfredo] gi|134272483|emb|CAM30746.1| putative chromosome partition protein [Streptococcus pyogenes str. Manfredo] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|94993855|ref|YP_601953.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10750] gi|94547363|gb|ABF37409.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10750] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|15674632|ref|NP_268806.1| putative chromosome segregation SMC protein [Streptococcus pyogenes M1 GAS] gi|71910252|ref|YP_281802.1| chromosome partition protein [Streptococcus pyogenes MGAS5005] gi|13621745|gb|AAK33527.1| putative chromosome segregation SMC protein [Streptococcus pyogenes M1 GAS] gi|71853034|gb|AAZ51057.1| chromosome partition protein [Streptococcus pyogenes MGAS5005] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|116511620|ref|YP_808836.1| condensin subunit Smc [Lactococcus lactis subsp. cremoris SK11] gi|116107274|gb|ABJ72414.1| condensin subunit Smc [Lactococcus lactis subsp. cremoris SK11] Length = 1174 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRKALNYA 78 >gi|322389959|ref|ZP_08063499.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 903] gi|321143395|gb|EFX38833.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 903] Length = 1178 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|312868408|ref|ZP_07728608.1| chromosome segregation protein SMC [Streptococcus parasanguinis F0405] gi|311096153|gb|EFQ54397.1| chromosome segregation protein SMC [Streptococcus parasanguinis F0405] Length = 1178 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|296876110|ref|ZP_06900164.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 15912] gi|296432821|gb|EFH18614.1| chromosome segregation protein SMC [Streptococcus parasanguinis ATCC 15912] Length = 1178 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|255658106|ref|ZP_05403515.1| putative cell division protein Smc [Mitsuokella multacida DSM 20544] gi|260849411|gb|EEX69418.1| putative cell division protein Smc [Mitsuokella multacida DSM 20544] Length = 1197 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F + IEF +T + G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFADKITIEFDHGITAIVGPNGSGKSNITDAVRWVLGEQNIRNLRGTR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I P+ +A Sbjct: 61 SEDIIFAGSAQRRPLNIA 78 >gi|50913819|ref|YP_059791.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10394] gi|50902893|gb|AAT86608.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10394] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|209559003|ref|YP_002285475.1| Putative chromosome segregation SMC [Streptococcus pyogenes NZ131] gi|209540204|gb|ACI60780.1| Putative chromosome segregation SMC [Streptococcus pyogenes NZ131] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|94989949|ref|YP_598049.1| chromosome partition protein smc [Streptococcus pyogenes MGAS10270] gi|94543457|gb|ABF33505.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS10270] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|306827818|ref|ZP_07461088.1| chromosome partition protein smc [Streptococcus pyogenes ATCC 10782] gi|304429988|gb|EFM33027.1| chromosome partition protein smc [Streptococcus pyogenes ATCC 10782] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|94988069|ref|YP_596170.1| chromosome partition protein [Streptococcus pyogenes MGAS9429] gi|94991955|ref|YP_600054.1| chromosome partition protein smc [Streptococcus pyogenes MGAS2096] gi|94541577|gb|ABF31626.1| chromosome partition protein [Streptococcus pyogenes MGAS9429] gi|94545463|gb|ABF35510.1| Chromosome partition protein smc [Streptococcus pyogenes MGAS2096] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|19745654|ref|NP_606790.1| chromosome segregation SMC [Streptococcus pyogenes MGAS8232] gi|19747785|gb|AAL97289.1| putative chromosome segregation SMC [Streptococcus pyogenes MGAS8232] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|56808932|ref|ZP_00366640.1| COG1196: Chromosome segregation ATPases [Streptococcus pyogenes M49 591] Length = 1179 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|157151450|ref|YP_001450083.1| chromosome segregation protein SMC [Streptococcus gordonii str. Challis substr. CH1] gi|157076244|gb|ABV10927.1| chromosome segregation protein SMC [Streptococcus gordonii str. Challis substr. CH1] Length = 1177 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E + W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITEGLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|91793868|ref|YP_563519.1| chromosome segregation protein SMC [Shewanella denitrificans OS217] gi|91715870|gb|ABE55796.1| Chromosome segregation protein SMC [Shewanella denitrificans OS217] Length = 1138 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F ++ KI F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDVTKIPFEQQLSAIIGPNGCGKSNIIDAVRWVLGESSAKNLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MTDVIFNGSSVRRPVSVA 78 >gi|323466306|gb|ADX69993.1| Cell division protein Smc [Lactobacillus helveticus H10] Length = 1189 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGMN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P+ A Sbjct: 61 MKDVIFAGSQYRKPLNKA 78 >gi|320528386|ref|ZP_08029548.1| segregation protein SMC [Solobacterium moorei F0204] gi|320131300|gb|EFW23868.1| segregation protein SMC [Solobacterium moorei F0204] Length = 981 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I+F +T + G NG GKS++++++ W+ + + GD Sbjct: 1 MFLKRIEMQGFKSFADRTIIQFDHPITGIVGPNGCGKSNIADSVRWVLGEQSAKSMRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MNDVIFAGSADRRRVNMA 78 >gi|266623887|ref|ZP_06116822.1| putative cell division protein Smc [Clostridium hathewayi DSM 13479] gi|288864300|gb|EFC96598.1| putative cell division protein Smc [Clostridium hathewayi DSM 13479] Length = 1193 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +I L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ Sbjct: 6 VIMYLKSIEIQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQKVKQLRS 65 Query: 85 DSIK---KRSIKTPMPMCMA 101 S++ +T P A Sbjct: 66 SSMQDVIFSGTETRKPQGFA 85 >gi|196247667|ref|ZP_03146369.1| chromosome segregation protein SMC [Geobacillus sp. G11MC16] gi|196212451|gb|EDY07208.1| chromosome segregation protein SMC [Geobacillus sp. G11MC16] Length = 1187 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIDFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSVKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGSDSRKPLNVA 78 >gi|138894714|ref|YP_001125167.1| chromosome partition protein [Geobacillus thermodenitrificans NG80-2] gi|134266227|gb|ABO66422.1| SMC protein (Chromosome partition protein) [Geobacillus thermodenitrificans NG80-2] Length = 1187 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRVSIDFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSVKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGSDSRKPLNVA 78 >gi|332203095|gb|EGJ17163.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA47901] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|332074857|gb|EGI85329.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA41301] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|332074580|gb|EGI85054.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA17545] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|327389482|gb|EGE87827.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA04375] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|331266251|ref|YP_004325881.1| chromosome condensation and segregation SMC protein [Streptococcus oralis Uo5] gi|326682923|emb|CBZ00540.1| chromosome condensation and segregation SMC protein [Streptococcus oralis Uo5] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|322376802|ref|ZP_08051295.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. M334] gi|321282609|gb|EFX59616.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. M334] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|322375350|ref|ZP_08049863.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] gi|321279613|gb|EFX56653.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|322387563|ref|ZP_08061172.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus infantis ATCC 700779] gi|321141430|gb|EFX36926.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus infantis ATCC 700779] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|315613275|ref|ZP_07888184.1| cell division protein Smc [Streptococcus sanguinis ATCC 49296] gi|315314510|gb|EFU62553.1| cell division protein Smc [Streptococcus sanguinis ATCC 49296] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|307704937|ref|ZP_07641828.1| chromosome segregation protein SMC [Streptococcus mitis SK597] gi|307621551|gb|EFO00597.1| chromosome segregation protein SMC [Streptococcus mitis SK597] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|307709492|ref|ZP_07645949.1| chromosome segregation protein SMC [Streptococcus mitis SK564] gi|307619806|gb|EFN98925.1| chromosome segregation protein SMC [Streptococcus mitis SK564] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|307706717|ref|ZP_07643522.1| chromosome segregation protein SMC [Streptococcus mitis SK321] gi|307617802|gb|EFN96964.1| chromosome segregation protein SMC [Streptococcus mitis SK321] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|307708795|ref|ZP_07645257.1| chromosome partition protein smc [Streptococcus mitis NCTC 12261] gi|307615161|gb|EFN94372.1| chromosome partition protein smc [Streptococcus mitis NCTC 12261] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|306825116|ref|ZP_07458458.1| cell division protein Smc [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432552|gb|EFM35526.1| cell division protein Smc [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|306829618|ref|ZP_07462808.1| cell division protein Smc [Streptococcus mitis ATCC 6249] gi|304428704|gb|EFM31794.1| cell division protein Smc [Streptococcus mitis ATCC 6249] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|301800167|emb|CBW32772.1| putative chromosome partition protein [Streptococcus pneumoniae OXC141] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|293365562|ref|ZP_06612271.1| cell division protein Smc [Streptococcus oralis ATCC 35037] gi|307703517|ref|ZP_07640459.1| chromosome segregation protein SMC [Streptococcus oralis ATCC 35037] gi|291315930|gb|EFE56374.1| cell division protein Smc [Streptococcus oralis ATCC 35037] gi|307622924|gb|EFO01919.1| chromosome segregation protein SMC [Streptococcus oralis ATCC 35037] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|289168051|ref|YP_003446320.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] gi|288907618|emb|CBJ22455.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|225860920|ref|YP_002742429.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298229965|ref|ZP_06963646.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254344|ref|ZP_06977930.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502756|ref|YP_003724696.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] gi|225727720|gb|ACO23571.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298238351|gb|ADI69482.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|225856913|ref|YP_002738424.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] gi|225724779|gb|ACO20631.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|225854712|ref|YP_002736224.1| chromosome segregation protein SMC [Streptococcus pneumoniae JJA] gi|225722373|gb|ACO18226.1| chromosome segregation protein SMC [Streptococcus pneumoniae JJA] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|225859041|ref|YP_002740551.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] gi|225721362|gb|ACO17216.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|221231941|ref|YP_002511093.1| chromosome partition protein [Streptococcus pneumoniae ATCC 700669] gi|220674401|emb|CAR68951.1| putative chromosome partition protein [Streptococcus pneumoniae ATCC 700669] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|194398150|ref|YP_002037847.1| chromosome segregation protein smc [Streptococcus pneumoniae G54] gi|194357817|gb|ACF56265.1| chromosome segregation protein smc, putative [Streptococcus pneumoniae G54] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|182684026|ref|YP_001835773.1| hypothetical protein SPCG_1056 [Streptococcus pneumoniae CGSP14] gi|303254258|ref|ZP_07340367.1| hypothetical protein CGSSpBS455_02192 [Streptococcus pneumoniae BS455] gi|303258882|ref|ZP_07344861.1| hypothetical protein CGSSp9vBS293_10438 [Streptococcus pneumoniae SP-BS293] gi|303261565|ref|ZP_07347512.1| hypothetical protein CGSSp14BS292_04130 [Streptococcus pneumoniae SP14-BS292] gi|303264236|ref|ZP_07350156.1| hypothetical protein CGSSpBS397_09985 [Streptococcus pneumoniae BS397] gi|303266133|ref|ZP_07352026.1| hypothetical protein CGSSpBS457_05117 [Streptococcus pneumoniae BS457] gi|303268140|ref|ZP_07353940.1| hypothetical protein CGSSpBS458_01192 [Streptococcus pneumoniae BS458] gi|182629360|gb|ACB90308.1| hypothetical protein SPCG_1056 [Streptococcus pneumoniae CGSP14] gi|301801898|emb|CBW34622.1| putative chromosome partition protein [Streptococcus pneumoniae INV200] gi|302598752|gb|EFL65789.1| hypothetical protein CGSSpBS455_02192 [Streptococcus pneumoniae BS455] gi|302637145|gb|EFL67633.1| hypothetical protein CGSSp14BS292_04130 [Streptococcus pneumoniae SP14-BS292] gi|302639825|gb|EFL70281.1| hypothetical protein CGSSpBS293_10438 [Streptococcus pneumoniae SP-BS293] gi|302642357|gb|EFL72704.1| hypothetical protein CGSSpBS458_01192 [Streptococcus pneumoniae BS458] gi|302644303|gb|EFL74557.1| hypothetical protein CGSSpBS457_05117 [Streptococcus pneumoniae BS457] gi|302646048|gb|EFL76275.1| hypothetical protein CGSSpBS397_09985 [Streptococcus pneumoniae BS397] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|169834374|ref|YP_001694677.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] gi|168996876|gb|ACA37488.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|169827095|ref|YP_001697253.1| chromosome partition protein smc [Lysinibacillus sphaericus C3-41] gi|168991583|gb|ACA39123.1| Chromosome partition protein smc [Lysinibacillus sphaericus C3-41] Length = 1191 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFAGSDSRKPLNFA 78 >gi|168493168|ref|ZP_02717311.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] gi|183576749|gb|EDT97277.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|168486567|ref|ZP_02711075.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1087-00] gi|183570412|gb|EDT90940.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1087-00] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|168485010|ref|ZP_02709948.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1873-00] gi|172041873|gb|EDT49919.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC1873-00] gi|332201710|gb|EGJ15780.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA47368] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|149019238|ref|ZP_01834600.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] gi|147931108|gb|EDK82087.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|148993856|ref|ZP_01823258.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|168489074|ref|ZP_02713273.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|147927681|gb|EDK78706.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|183572487|gb|EDT93015.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|301794329|emb|CBW36754.1| putative chromosome partition protein [Streptococcus pneumoniae INV104] gi|332073585|gb|EGI84064.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA17570] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|148989270|ref|ZP_01820650.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP6-BS73] gi|147925248|gb|EDK76327.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP6-BS73] Length = 106 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|148985142|ref|ZP_01818381.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] gi|147922587|gb|EDK73705.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|149007090|ref|ZP_01830759.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP18-BS74] gi|307127163|ref|YP_003879194.1| chromosome segregation protein SMC [Streptococcus pneumoniae 670-6B] gi|147761394|gb|EDK68360.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP18-BS74] gi|306484225|gb|ADM91094.1| chromosome segregation protein SMC [Streptococcus pneumoniae 670-6B] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|149002615|ref|ZP_01827547.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP14-BS69] gi|237649947|ref|ZP_04524199.1| hypothetical protein SpneC1_04341 [Streptococcus pneumoniae CCRI 1974] gi|237822504|ref|ZP_04598349.1| hypothetical protein SpneC19_09414 [Streptococcus pneumoniae CCRI 1974M2] gi|147759226|gb|EDK66219.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP14-BS69] gi|332200694|gb|EGJ14766.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA41317] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|149012299|ref|ZP_01833368.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP19-BS75] gi|147763625|gb|EDK70560.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP19-BS75] Length = 1081 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|148998679|ref|ZP_01826118.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP11-BS70] gi|168491167|ref|ZP_02715310.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC0288-04] gi|168575702|ref|ZP_02721617.1| chromosome segregation protein SMC [Streptococcus pneumoniae MLV-016] gi|307067895|ref|YP_003876861.1| chromosome segregation ATPase [Streptococcus pneumoniae AP200] gi|147755516|gb|EDK62564.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP11-BS70] gi|183574446|gb|EDT94974.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC0288-04] gi|183578276|gb|EDT98804.1| chromosome segregation protein SMC [Streptococcus pneumoniae MLV-016] gi|306409432|gb|ADM84859.1| Chromosome segregation ATPase [Streptococcus pneumoniae AP200] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|126654292|ref|ZP_01726069.1| Smc [Bacillus sp. B14905] gi|126589256|gb|EAZ83417.1| Smc [Bacillus sp. B14905] Length = 1191 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFAGSDSRKPLNFA 78 >gi|15901108|ref|NP_345712.1| hypothetical protein SP_1247 [Streptococcus pneumoniae TIGR4] gi|111658430|ref|ZP_01409109.1| hypothetical protein SpneT_02000401 [Streptococcus pneumoniae TIGR4] gi|14972729|gb|AAK75352.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDIIFAGTESRKPLNYA 78 >gi|15903169|ref|NP_358719.1| chromosome condensation and segregation SMC protein [Streptococcus pneumoniae R6] gi|116515906|ref|YP_816575.1| chromosome segregation protein SMC [Streptococcus pneumoniae D39] gi|15458753|gb|AAK99929.1| chromosome condensation and segregation SMC protein [Streptococcus pneumoniae R6] gi|116076482|gb|ABJ54202.1| chromosome segregation protein SMC [Streptococcus pneumoniae D39] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|289449493|ref|YP_003474967.1| chromosome segregation protein SMC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184040|gb|ADC90465.1| chromosome segregation protein SMC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1197 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F E IEF +T + G NG GKS++++AI W+ + + G+ Sbjct: 1 MHLKSIELQGFKSFPERTVIEFHTGMTAIVGPNGSGKSNVTDAIRWVLGEQSVKTLRGNK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MEDIIFAGTQSRRPLSYA 78 >gi|210622530|ref|ZP_03293223.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] gi|210154165|gb|EEA85171.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] Length = 1184 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L ++E+ F+ F E I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKELELKGFKSFPEKTDIVFKNGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + PM Sbjct: 61 LEDVIFAGSDKKKPMN 76 >gi|255591216|ref|XP_002535467.1| structural maintenance of chromosomes smc, bacterial, putative [Ricinus communis] gi|223523015|gb|EEF26914.1| structural maintenance of chromosomes smc, bacterial, putative [Ricinus communis] Length = 333 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|227540141|ref|ZP_03970190.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240002|gb|EEI90017.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33300] Length = 1180 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F D +T + G NG GKS++ +AI W+ + R + Sbjct: 1 MQLTKLEIKGFKSFGDKITINFNDGVTAIVGPNGCGKSNVVDAIRWVMGEQSTRALRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P +A Sbjct: 61 MENIIFNGTKNRKPANLA 78 >gi|220915826|ref|YP_002491130.1| chromosome segregation protein SMC [Anaeromyxobacter dehalogenans 2CP-1] gi|219953680|gb|ACL64064.1| chromosome segregation protein SMC [Anaeromyxobacter dehalogenans 2CP-1] Length = 1199 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++I F+ F + I F D +T V G NG GKS+++++I W+ + R G S Sbjct: 1 MRIRRLDIVGFKSFMDKTVIAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ MA Sbjct: 61 MEDVIFNGSESKPPLSMA 78 >gi|197121125|ref|YP_002133076.1| chromosome segregation protein SMC [Anaeromyxobacter sp. K] gi|196170974|gb|ACG71947.1| chromosome segregation protein SMC [Anaeromyxobacter sp. K] Length = 1199 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++I F+ F + I F D +T V G NG GKS+++++I W+ + R G S Sbjct: 1 MRIRRLDIVGFKSFMDKTVIAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ MA Sbjct: 61 MEDVIFNGSESKPPLSMA 78 >gi|227544366|ref|ZP_03974415.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri CF48-3A] gi|300909773|ref|ZP_07127234.1| cell division protein Smc [Lactobacillus reuteri SD2112] gi|227185629|gb|EEI65700.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri CF48-3A] gi|300893638|gb|EFK86997.1| cell division protein Smc [Lactobacillus reuteri SD2112] Length = 1187 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD Sbjct: 1 MQLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDR 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + P+ A+ Sbjct: 61 MADVIFNGSSDRKPLNRAL 79 >gi|197303072|ref|ZP_03168120.1| hypothetical protein RUMLAC_01799 [Ruminococcus lactaris ATCC 29176] gi|197297927|gb|EDY32479.1| hypothetical protein RUMLAC_01799 [Ruminococcus lactaris ATCC 29176] Length = 1186 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|194466492|ref|ZP_03072479.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23] gi|194453528|gb|EDX42425.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23] Length = 1187 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD Sbjct: 1 MQLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDR 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + P+ A+ Sbjct: 61 MADVIFNGSSDRKPLNRAL 79 >gi|148544382|ref|YP_001271752.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016] gi|184153746|ref|YP_001842087.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|227363193|ref|ZP_03847327.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri MM2-3] gi|325682702|ref|ZP_08162218.1| cell division protein Smc [Lactobacillus reuteri MM4-1A] gi|148531416|gb|ABQ83415.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016] gi|183225090|dbj|BAG25607.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|227071799|gb|EEI10088.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus reuteri MM2-3] gi|324977052|gb|EGC14003.1| cell division protein Smc [Lactobacillus reuteri MM4-1A] Length = 1187 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + + F+ F + I+F +T + G NG GKS++ EAI+W+ + GD Sbjct: 1 MQLLSLTLDGFKSFAQKTTIKFEPGMTGIVGPNGSGKSNIIEAIQWVMGEQSAHHLRGDR 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + P+ A+ Sbjct: 61 MADVIFNGSSDRKPLNRAL 79 >gi|260437030|ref|ZP_05790846.1| SMC family protein [Butyrivibrio crossotus DSM 2876] gi|292810339|gb|EFF69544.1| SMC family protein [Butyrivibrio crossotus DSM 2876] Length = 1190 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKKIEVQGFKSFANKLLFEFDNGITGIVGPNGSGKSNIADAVRWVLGEQSAKQLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MEDIIFAGTETRKPVSFA 78 >gi|300771867|ref|ZP_07081738.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761253|gb|EFK58078.1| Smc family chromosome segregation protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1180 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F D +T + G NG GKS++ +AI W+ + R + Sbjct: 1 MQLTKLEIKGFKSFGDKITINFNDGVTAIVGPNGCGKSNVVDAIRWVMGEQSTRALRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P +A Sbjct: 61 MENIIFNGTKNRKPANLA 78 >gi|108757313|ref|YP_633058.1| chromosome segregation protein SMC [Myxococcus xanthus DK 1622] gi|108461193|gb|ABF86378.1| chromosome segregation protein SMC [Myxococcus xanthus DK 1622] Length = 1200 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++ ++I+ F+ F E F + +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MRIKRLDITGFKSFMERSVFTFDEGVTGIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGRG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ MA Sbjct: 61 MEDVIFNGSENKPPLSMA 78 >gi|332367147|gb|EGJ44883.1| cell division protein Smc [Streptococcus sanguinis SK1059] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|332362455|gb|EGJ40255.1| cell division protein Smc [Streptococcus sanguinis SK1056] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|332358949|gb|EGJ36770.1| cell division protein Smc [Streptococcus sanguinis SK49] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|332358678|gb|EGJ36501.1| cell division protein Smc [Streptococcus sanguinis SK355] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|328946756|gb|EGG40894.1| cell division protein Smc [Streptococcus sanguinis SK1087] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|327490289|gb|EGF22077.1| cell division protein Smc [Streptococcus sanguinis SK1058] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|327470652|gb|EGF16108.1| cell division protein Smc [Streptococcus sanguinis SK330] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|327463121|gb|EGF09442.1| cell division protein Smc [Streptococcus sanguinis SK1] gi|327474732|gb|EGF20137.1| cell division protein Smc [Streptococcus sanguinis SK408] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|327461015|gb|EGF07348.1| cell division protein Smc [Streptococcus sanguinis SK1057] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|325696124|gb|EGD38015.1| cell division protein Smc [Streptococcus sanguinis SK160] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|325694851|gb|EGD36756.1| cell division protein Smc [Streptococcus sanguinis SK150] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|325690807|gb|EGD32808.1| cell division protein Smc [Streptococcus sanguinis SK115] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|325687263|gb|EGD29285.1| cell division protein Smc [Streptococcus sanguinis SK72] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|324994822|gb|EGC26735.1| cell division protein Smc [Streptococcus sanguinis SK678] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|324993857|gb|EGC25776.1| cell division protein Smc [Streptococcus sanguinis SK405] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|324991497|gb|EGC23430.1| cell division protein Smc [Streptococcus sanguinis SK353] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|323351216|ref|ZP_08086872.1| cell division protein Smc [Streptococcus sanguinis VMC66] gi|322122440|gb|EFX94151.1| cell division protein Smc [Streptococcus sanguinis VMC66] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|125718367|ref|YP_001035500.1| structural maintenance of chromosome protein (chromosome segregation ATPase) [Streptococcus sanguinis SK36] gi|125498284|gb|ABN44950.1| Structural maintenance of chromosome protein (chromosome segregation ATPase), putative [Streptococcus sanguinis SK36] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T P+ A Sbjct: 61 MPDVIFAGTETRKPLNYA 78 >gi|167758291|ref|ZP_02430418.1| hypothetical protein CLOSCI_00629 [Clostridium scindens ATCC 35704] gi|167664188|gb|EDS08318.1| hypothetical protein CLOSCI_00629 [Clostridium scindens ATCC 35704] Length = 1186 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFAHKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|15672785|ref|NP_266959.1| chromosome segregation SMC protein [Lactococcus lactis subsp. lactis Il1403] gi|12723724|gb|AAK04901.1|AE006313_8 chromosome segregation SMC protein [Lactococcus lactis subsp. lactis Il1403] Length = 924 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+EF +T V G NG GKS++ EA+ W+ + + G Sbjct: 1 MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEKRRALNYA 78 >gi|322391778|ref|ZP_08065243.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus peroris ATCC 700780] gi|321145258|gb|EFX40654.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus peroris ATCC 700780] Length = 1178 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|58337572|ref|YP_194157.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM] gi|58254889|gb|AAV43126.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM] Length = 1189 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTVIHFNKGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQYRKPMNKA 78 >gi|270292631|ref|ZP_06198842.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270278610|gb|EFA24456.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 1179 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTRVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MPDVIFAGTESRKPLNYA 78 >gi|225570732|ref|ZP_03779755.1| hypothetical protein CLOHYLEM_06833 [Clostridium hylemonae DSM 15053] gi|225160475|gb|EEG73094.1| hypothetical protein CLOHYLEM_06833 [Clostridium hylemonae DSM 15053] Length = 195 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFAHKIKFDFHNGITAIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|302389626|ref|YP_003825447.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM 16646] gi|302200254|gb|ADL07824.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM 16646] Length = 1185 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + +IEF + + G NG GKS++++AI W+ + + G Sbjct: 1 MYLKRVELQGFKSFADRIEIEFQPGINAIVGPNGSGKSNITDAIRWVLGEQSIKTLRGSK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + PM MA Sbjct: 61 LEDVIFAGSHGRKPMGMA 78 >gi|227904214|ref|ZP_04022019.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC 4796] gi|227868233|gb|EEJ75654.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC 4796] Length = 1189 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADKTVIHFNKGITGIVGPNGSGKSNITEAIRWVMGESSAKSLRGTN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + PM A Sbjct: 61 MKDVIFAGSQYRKPMNKA 78 >gi|21909912|ref|NP_664180.1| putative chromosome condensation and segregation SMC protein [Streptococcus pyogenes MGAS315] gi|28896389|ref|NP_802739.1| chromosome segregation SMC protein [Streptococcus pyogenes SSI-1] gi|21904100|gb|AAM78983.1| putative chromosome condensation and segregation SMC protein [Streptococcus pyogenes MGAS315] gi|28811640|dbj|BAC64572.1| putative chromosome segregation SMC protein [Streptococcus pyogenes SSI-1] Length = 1175 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFYKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|330813674|ref|YP_004357913.1| chromosome partition protein smc [Candidatus Pelagibacter sp. IMCC9063] gi|327486769|gb|AEA81174.1| chromosome partition protein smc [Candidatus Pelagibacter sp. IMCC9063] Length = 881 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K +E+ F+ F + F D LT + G NG GKS++ EA+ W + + G Sbjct: 1 MKFKQLEVVGFKSFADKTSFYFEDGLTGIVGPNGCGKSNIVEALRWCMGETSAKSLRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291550078|emb|CBL26340.1| condensin subunit Smc [Ruminococcus torques L2-14] Length = 1186 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|225374437|ref|ZP_03751658.1| hypothetical protein ROSEINA2194_00052 [Roseburia inulinivorans DSM 16841] gi|225213675|gb|EEG96029.1| hypothetical protein ROSEINA2194_00052 [Roseburia inulinivorans DSM 16841] Length = 921 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ + ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTENRKPLSYA 78 >gi|332141271|ref|YP_004427009.1| Chromosome segregation ATPase, sms [Alteromonas macleodii str. 'Deep ecotype'] gi|327551293|gb|AEA98011.1| Chromosome segregation ATPase, sms [Alteromonas macleodii str. 'Deep ecotype'] Length = 1195 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E I F +T + G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKKIKLAGFKSFVEPTTIPFPGEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 MTDVIFNGSSSRKP----VGQCSVEL 82 >gi|301066652|ref|YP_003788675.1| chromosome segregation ATPase [Lactobacillus casei str. Zhang] gi|300439059|gb|ADK18825.1| Chromosome segregation ATPase [Lactobacillus casei str. Zhang] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MQLKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MGDVIFAGTDTRPALNRA 78 >gi|239631966|ref|ZP_04674997.1| chromosome segregation ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526431|gb|EEQ65432.1| chromosome segregation ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MQLKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MGDVIFAGTDTRPALNRA 78 >gi|116495088|ref|YP_806822.1| chromosome segregation ATPase [Lactobacillus casei ATCC 334] gi|191638592|ref|YP_001987758.1| Chromosome seggregation Smc protein [Lactobacillus casei BL23] gi|227534897|ref|ZP_03964946.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116105238|gb|ABJ70380.1| condensin subunit Smc [Lactobacillus casei ATCC 334] gi|190712894|emb|CAQ66900.1| Chromosome seggregation Smc protein [Lactobacillus casei BL23] gi|227187653|gb|EEI67720.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327382634|gb|AEA54110.1| chromosome segregation protein SMC [Lactobacillus casei LC2W] gi|327385828|gb|AEA57302.1| chromosome segregation protein SMC [Lactobacillus casei BD-II] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MQLKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MGDVIFAGTDTRPALNRA 78 >gi|229541119|ref|ZP_04430179.1| chromosome segregation protein SMC [Bacillus coagulans 36D1] gi|229325539|gb|EEN91214.1| chromosome segregation protein SMC [Bacillus coagulans 36D1] Length = 1190 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + EF +T V G NG GKS++ +A+ W+ + + G Sbjct: 1 MFLKRLDVIGFKSFADRISFEFVPGVTAVVGPNGSGKSNVIDAVRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ A Sbjct: 61 MEDVIFAGSDTRKPLNFA 78 >gi|225025908|ref|ZP_03715100.1| hypothetical protein EUBHAL_00144 [Eubacterium hallii DSM 3353] gi|224956694|gb|EEG37903.1| hypothetical protein EUBHAL_00144 [Eubacterium hallii DSM 3353] Length = 1187 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F EF +T + G NG GKS++ +A+ W+ + R+ G Sbjct: 1 MYLKSIEINGFKSFANKIVFEFPQGITGIVGPNGSGKSNIGDAVRWVLGEQSARQLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ PM A Sbjct: 61 MEDVIFSGTQSRRPMGFA 78 >gi|51892593|ref|YP_075284.1| putative chromosome segregation SMC protein [Symbiobacterium thermophilum IAM 14863] gi|51856282|dbj|BAD40440.1| putative chromosome segregation SMC protein [Symbiobacterium thermophilum IAM 14863] Length = 1193 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F E ++EF +T V G NG GKS++S+AI W+ + R G S Sbjct: 1 MYLKRLEILGFKSFAEKTELEFTPGITAVVGPNGSGKSNVSDAIRWVLGEQSARALRGGS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + M A Sbjct: 61 MADVIFAGSDGKRAMGFA 78 >gi|254974794|ref|ZP_05271266.1| chromosome partition protein [Clostridium difficile QCD-66c26] gi|255092182|ref|ZP_05321660.1| chromosome partition protein [Clostridium difficile CIP 107932] gi|255313921|ref|ZP_05355504.1| chromosome partition protein [Clostridium difficile QCD-76w55] gi|255516600|ref|ZP_05384276.1| chromosome partition protein [Clostridium difficile QCD-97b34] gi|255649700|ref|ZP_05396602.1| chromosome partition protein [Clostridium difficile QCD-37x79] gi|260682856|ref|YP_003214141.1| chromosome partition protein [Clostridium difficile CD196] gi|260686454|ref|YP_003217587.1| chromosome partition protein [Clostridium difficile R20291] gi|260209019|emb|CBA62112.1| chromosome partition protein [Clostridium difficile CD196] gi|260212470|emb|CBE03375.1| chromosome partition protein [Clostridium difficile R20291] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + T PM Sbjct: 61 LEDVIFAGTDTKKPMN 76 >gi|255655260|ref|ZP_05400669.1| chromosome partition protein [Clostridium difficile QCD-23m63] gi|296451245|ref|ZP_06892985.1| chromosome segregation protein Smc [Clostridium difficile NAP08] gi|296880403|ref|ZP_06904366.1| chromosome segregation protein Smc [Clostridium difficile NAP07] gi|296259851|gb|EFH06706.1| chromosome segregation protein Smc [Clostridium difficile NAP08] gi|296428644|gb|EFH14528.1| chromosome segregation protein Smc [Clostridium difficile NAP07] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + T PM Sbjct: 61 LEDVIFAGTDTKKPMN 76 >gi|255100266|ref|ZP_05329243.1| chromosome partition protein [Clostridium difficile QCD-63q42] Length = 1184 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + T PM Sbjct: 61 LEDVIFAGTDTKKPMN 76 >gi|166031774|ref|ZP_02234603.1| hypothetical protein DORFOR_01475 [Dorea formicigenerans ATCC 27755] gi|166028227|gb|EDR46984.1| hypothetical protein DORFOR_01475 [Dorea formicigenerans ATCC 27755] Length = 1186 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|312864737|ref|ZP_07724968.1| chromosome segregation protein SMC [Streptococcus downei F0415] gi|311099864|gb|EFQ58077.1| chromosome segregation protein SMC [Streptococcus downei F0415] Length = 1179 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + +IEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEMQGFKSFADKTRIEFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ + Sbjct: 61 MPDVIFAGTQDRSPLNFS 78 >gi|295696067|ref|YP_003589305.1| chromosome segregation protein SMC [Bacillus tusciae DSM 2912] gi|295411669|gb|ADG06161.1| chromosome segregation protein SMC [Bacillus tusciae DSM 2912] Length = 1192 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +EIS F+ F + +IE +T V G NG GKS+++EA+ W+ + R G Sbjct: 1 MHIKRLEISGFKSFADRTEIELPPGITAVVGPNGSGKSNIAEALRWVLGEQSARSLRGAR 60 Query: 85 -DSIKKRSIKTPMPMC 99 + + P+ Sbjct: 61 MEDVIFAGSDGRKPIN 76 >gi|87310422|ref|ZP_01092552.1| chromosome partition protein Smc [Blastopirellula marina DSM 3645] gi|87286921|gb|EAQ78825.1| chromosome partition protein Smc [Blastopirellula marina DSM 3645] Length = 1209 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + + EF +T+V G NG GKS++ +AI+W + + G + Sbjct: 2 LKALELVGFKSFADKTRFEFPPGITVVVGPNGSGKSNIVDAIKWALGEQSAKSLRGKEMA 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|126698846|ref|YP_001087743.1| chromosome partition protein [Clostridium difficile 630] gi|115250283|emb|CAJ68105.1| Structural maintenance chromosome protein SMC [Clostridium difficile] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + T PM Sbjct: 61 LEDVIFAGTDTKKPMN 76 >gi|238916989|ref|YP_002930506.1| chromosome segregation protein [Eubacterium eligens ATCC 27750] gi|238872349|gb|ACR72059.1| chromosome segregation protein [Eubacterium eligens ATCC 27750] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFAGTENRKPVGFA 78 >gi|71903093|ref|YP_279896.1| chromosome partition protein smc [Streptococcus pyogenes MGAS6180] gi|71802188|gb|AAX71541.1| chromosome partition protein smc [Streptococcus pyogenes MGAS6180] Length = 1179 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIELEGFKSFADKTKIEFYKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTQNRNPLNYA 78 >gi|153853252|ref|ZP_01994661.1| hypothetical protein DORLON_00646 [Dorea longicatena DSM 13814] gi|149754038|gb|EDM63969.1| hypothetical protein DORLON_00646 [Dorea longicatena DSM 13814] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|255306206|ref|ZP_05350378.1| chromosome partition protein [Clostridium difficile ATCC 43255] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +E+ F+ F I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 1 MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + T PM Sbjct: 61 LEDVIFAGTDTKKPMN 76 >gi|332799149|ref|YP_004460648.1| chromosome segregation protein SMC [Tepidanaerobacter sp. Re1] gi|332696884|gb|AEE91341.1| chromosome segregation protein SMC [Tepidanaerobacter sp. Re1] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F + +EF + + G NG GKS++ +AI W+ + + G Sbjct: 1 MYLKRIELHGFKSFADRVILEFQPGINAIVGPNGSGKSNIIDAIRWVLGEQSVKTLRGYK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + PM MA Sbjct: 61 LEDVIFAGSNKKKPMGMA 78 >gi|299536777|ref|ZP_07050085.1| chromosome partition protein smc [Lysinibacillus fusiformis ZC1] gi|298727789|gb|EFI68356.1| chromosome partition protein smc [Lysinibacillus fusiformis ZC1] Length = 1193 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFAGSDSRKPLNFA 78 >gi|114563633|ref|YP_751146.1| chromosome segregation protein SMC [Shewanella frigidimarina NCIMB 400] gi|114334926|gb|ABI72308.1| chromosome segregation protein SMC [Shewanella frigidimarina NCIMB 400] Length = 1144 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFDNALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MTDVIFNGSSARKPISVA 78 >gi|256847359|ref|ZP_05552805.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] gi|256716023|gb|EEU30998.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +EI F+ F I+F +T + G NG GKS++ EA+ W+ + + G Sbjct: 1 MQLVSMEIDGFKSFAHKTTIKFQPGMTGIIGPNGSGKSNVIEALRWVMGEQSAKTLRGGK 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + K P+ AV Sbjct: 61 MVDVIFNGSKDHHPLNRAV 79 >gi|238923873|ref|YP_002937389.1| chromosome segregation protein SMC [Eubacterium rectale ATCC 33656] gi|238875548|gb|ACR75255.1| chromosome segregation protein SMC [Eubacterium rectale ATCC 33656] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S Sbjct: 1 MYLKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTENRKPLGYA 78 >gi|218283537|ref|ZP_03489527.1| hypothetical protein EUBIFOR_02117 [Eubacterium biforme DSM 3989] gi|218215805|gb|EEC89343.1| hypothetical protein EUBIFOR_02117 [Eubacterium biforme DSM 3989] Length = 975 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F + I+F +T + G NG GKS++++AI W+ + + Sbjct: 1 MFLKRIELQGFKSFADKTVIQFDQDITGIVGPNGCGKSNVNDAIRWVLGEQSVKSLRSGT 60 Query: 85 --DSIKKRSIKTPMPMCMA 101 I + P+ MA Sbjct: 61 NMSDIIFSGSEYRKPVNMA 79 >gi|291527953|emb|CBK93539.1| condensin subunit Smc [Eubacterium rectale M104/1] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S Sbjct: 1 MYLKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTENRKPLGYA 78 >gi|227890690|ref|ZP_04008495.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus salivarius ATCC 11741] gi|227867628|gb|EEJ75049.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus salivarius ATCC 11741] Length = 1178 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ + + G Sbjct: 1 MKIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVLGEQSVKNLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MPDIIFAGSDTRAALNRA 78 >gi|291524527|emb|CBK90114.1| condensin subunit Smc [Eubacterium rectale DSM 17629] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G S Sbjct: 1 MYLKSLEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTENRKPLGYA 78 >gi|153810623|ref|ZP_01963291.1| hypothetical protein RUMOBE_01007 [Ruminococcus obeum ATCC 29174] gi|149833019|gb|EDM88101.1| hypothetical protein RUMOBE_01007 [Ruminococcus obeum ATCC 29174] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSFA 78 >gi|332522490|ref|ZP_08398742.1| chromosome segregation protein SMC [Streptococcus porcinus str. Jelinkova 176] gi|332313754|gb|EGJ26739.1| chromosome segregation protein SMC [Streptococcus porcinus str. Jelinkova 176] Length = 1181 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKKIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDIIFAGTESRNALNFA 78 >gi|284048840|ref|YP_003399179.1| chromosome segregation protein SMC [Acidaminococcus fermentans DSM 20731] gi|283953061|gb|ADB47864.1| chromosome segregation protein SMC [Acidaminococcus fermentans DSM 20731] Length = 1187 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L F+ F + I+F +T + G NG GKS++S+AI W+ + + G Sbjct: 1 MRLKSFSAHGFKSFADKVNIDFEPGITAIVGPNGSGKSNISDAIRWVLGEQSVKYLRGTK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM MA Sbjct: 61 MEDVIFAGSSGRRPMGMA 78 >gi|154505347|ref|ZP_02042085.1| hypothetical protein RUMGNA_02862 [Ruminococcus gnavus ATCC 29149] gi|153794390|gb|EDN76810.1| hypothetical protein RUMGNA_02862 [Ruminococcus gnavus ATCC 29149] Length = 1185 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKCIEVQGFKSFANRIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|291539669|emb|CBL12780.1| condensin subunit Smc [Roseburia intestinalis XB6B4] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDIIFAGTENRKPLSYA 78 >gi|90961603|ref|YP_535519.1| chromosome partition protein [Lactobacillus salivarius UCC118] gi|90820797|gb|ABD99436.1| Chromosome partition protein [Lactobacillus salivarius UCC118] Length = 1178 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ + + G Sbjct: 1 MKIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVLGEQSVKNLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MPDIIFAGSDTRAALNRA 78 >gi|301299299|ref|ZP_07205585.1| chromosome segregation protein SMC [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853143|gb|EFK80741.1| chromosome segregation protein SMC [Lactobacillus salivarius ACS-116-V-Col5a] Length = 1178 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ + + G Sbjct: 1 MKIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVLGEQSVKNLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MPDIIFAGSDTRAALNRA 78 >gi|229019044|ref|ZP_04175884.1| Chromosome partition protein smc [Bacillus cereus AH1273] gi|229025289|ref|ZP_04181709.1| Chromosome partition protein smc [Bacillus cereus AH1272] gi|228736042|gb|EEL86617.1| Chromosome partition protein smc [Bacillus cereus AH1272] gi|228742246|gb|EEL92406.1| Chromosome partition protein smc [Bacillus cereus AH1273] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNIA 78 >gi|282849042|ref|ZP_06258431.1| chromosome segregation protein SMC [Veillonella parvula ATCC 17745] gi|282581317|gb|EFB86711.1| chromosome segregation protein SMC [Veillonella parvula ATCC 17745] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|269797768|ref|YP_003311668.1| chromosome segregation protein SMC [Veillonella parvula DSM 2008] gi|269094397|gb|ACZ24388.1| chromosome segregation protein SMC [Veillonella parvula DSM 2008] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|294793532|ref|ZP_06758669.1| putative cell division protein Smc [Veillonella sp. 3_1_44] gi|294455102|gb|EFG23474.1| putative cell division protein Smc [Veillonella sp. 3_1_44] Length = 1184 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|229134656|ref|ZP_04263465.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST196] gi|228648702|gb|EEL04728.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST196] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|295109854|emb|CBL23807.1| condensin subunit Smc [Ruminococcus obeum A2-162] Length = 1186 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSFA 78 >gi|288553093|ref|YP_003425028.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4] gi|288544253|gb|ADC48136.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4] Length = 1188 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F E IEF +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKRLEVVGFKSFAEQMNIEFVPGVTAVVGPNGSGKSNISDAVRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MEDIIFAGSDTRKRLNYA 78 >gi|228922602|ref|ZP_04085902.1| Chromosome partition protein smc [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837031|gb|EEM82372.1| Chromosome partition protein smc [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|313890274|ref|ZP_07823908.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus SPIN 20026] gi|313121379|gb|EFR44484.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus SPIN 20026] Length = 1181 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKKIEMQGFKSFADKTKIEFEKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDIIFAGTESRNALNFA 78 >gi|258645804|ref|ZP_05733273.1| putative cell division protein Smc [Dialister invisus DSM 15470] gi|260403174|gb|EEW96721.1| putative cell division protein Smc [Dialister invisus DSM 15470] Length = 1185 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KLL + + F+ F + IEFAD +T++ G NG GKS++S+A+ W+ G Sbjct: 1 MKLLRLILQGFKSFADKTTIEFADGMTVIVGPNGCGKSNISDAVRWVLGEQNVHNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P A Sbjct: 61 TEDIIFSGAEGRNPKNAA 78 >gi|229031478|ref|ZP_04187478.1| Chromosome partition protein smc [Bacillus cereus AH1271] gi|228729767|gb|EEL80747.1| Chromosome partition protein smc [Bacillus cereus AH1271] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|322418393|ref|YP_004197616.1| chromosome segregation protein SMC [Geobacter sp. M18] gi|320124780|gb|ADW12340.1| chromosome segregation protein SMC [Geobacter sp. M18] Length = 1177 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKIKRLEIHGFKSFQDKSVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKS 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ + P+ MA Sbjct: 61 MEDIIFGGTEFRKPLGMA 78 >gi|161507713|ref|YP_001577670.1| chromosome segregation protein Smc [Lactobacillus helveticus DPC 4571] gi|160348702|gb|ABX27376.1| Chromosome segregation protein Smc [Lactobacillus helveticus DPC 4571] Length = 1189 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + I F D +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTELVLDGFKSFADRTTIHFNDGITGIVGPNGSGKSNITEAIRWVMGEASAKSLRGTN 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|291535140|emb|CBL08252.1| condensin subunit Smc [Roseburia intestinalis M50/1] Length = 1186 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDIIFAGTENRKPLSYA 78 >gi|228947567|ref|ZP_04109857.1| Chromosome partition protein smc [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228812087|gb|EEM58418.1| Chromosome partition protein smc [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229174514|ref|ZP_04302046.1| Chromosome partition protein smc [Bacillus cereus MM3] gi|228609074|gb|EEK66364.1| Chromosome partition protein smc [Bacillus cereus MM3] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|167636668|ref|ZP_02394958.1| chromosome segregation SMC protein [Bacillus anthracis str. A0442] gi|170689651|ref|ZP_02880832.1| chromosome segregation SMC protein [Bacillus anthracis str. A0465] gi|196035877|ref|ZP_03103279.1| chromosome segregation SMC protein [Bacillus cereus W] gi|228916485|ref|ZP_04080051.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928896|ref|ZP_04091928.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229123362|ref|ZP_04252566.1| Chromosome partition protein smc [Bacillus cereus 95/8201] gi|254683444|ref|ZP_05147304.1| chromosome segregation SMC protein [Bacillus anthracis str. CNEVA-9066] gi|254721379|ref|ZP_05183168.1| chromosome segregation SMC protein [Bacillus anthracis str. A1055] gi|254739519|ref|ZP_05197216.1| chromosome segregation SMC protein [Bacillus anthracis str. Kruger B] gi|167527919|gb|EDR90735.1| chromosome segregation SMC protein [Bacillus anthracis str. A0442] gi|170666396|gb|EDT17178.1| chromosome segregation SMC protein [Bacillus anthracis str. A0465] gi|195991526|gb|EDX55492.1| chromosome segregation SMC protein [Bacillus cereus W] gi|228660138|gb|EEL15774.1| Chromosome partition protein smc [Bacillus cereus 95/8201] gi|228830703|gb|EEM76308.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843064|gb|EEM88146.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|47570281|ref|ZP_00240930.1| reticulocyte binding protein [Bacillus cereus G9241] gi|47553045|gb|EAL11447.1| reticulocyte binding protein [Bacillus cereus G9241] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|331701484|ref|YP_004398443.1| chromosome segregation protein SMC [Lactobacillus buchneri NRRL B-30929] gi|329128827|gb|AEB73380.1| chromosome segregation protein SMC [Lactobacillus buchneri NRRL B-30929] Length = 1183 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI F+ F + I+F +T + G NG GKS+++E+I W+ + + G Sbjct: 1 MQLKSIEIIGFKSFADKTLIKFPGGMTGIVGPNGSGKSNIAESIRWVMGEQSAKNLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MPDVIFSGSADRRSLGMA 78 >gi|228935162|ref|ZP_04097989.1| Chromosome partition protein smc [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824527|gb|EEM70332.1| Chromosome partition protein smc [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|228986991|ref|ZP_04147117.1| Chromosome partition protein smc [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772769|gb|EEM21209.1| Chromosome partition protein smc [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|163941586|ref|YP_001646470.1| chromosome segregation protein SMC [Bacillus weihenstephanensis KBAB4] gi|229013031|ref|ZP_04170196.1| Chromosome partition protein smc [Bacillus mycoides DSM 2048] gi|229168587|ref|ZP_04296310.1| Chromosome partition protein smc [Bacillus cereus AH621] gi|163863783|gb|ABY44842.1| chromosome segregation protein SMC [Bacillus weihenstephanensis KBAB4] gi|228614993|gb|EEK72095.1| Chromosome partition protein smc [Bacillus cereus AH621] gi|228748285|gb|EEL98145.1| Chromosome partition protein smc [Bacillus mycoides DSM 2048] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|325265085|ref|ZP_08131812.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] gi|324029775|gb|EGB91063.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] Length = 1186 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|304411947|ref|ZP_07393558.1| chromosome segregation protein SMC [Shewanella baltica OS183] gi|307303285|ref|ZP_07583040.1| chromosome segregation protein SMC [Shewanella baltica BA175] gi|304349807|gb|EFM14214.1| chromosome segregation protein SMC [Shewanella baltica OS183] gi|306913645|gb|EFN44067.1| chromosome segregation protein SMC [Shewanella baltica BA175] Length = 1169 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 32 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 91 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 92 MADVIFNGSSARKPVSVA 109 >gi|315268062|gb|ADT94915.1| chromosome segregation protein SMC [Shewanella baltica OS678] Length = 1169 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 32 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 91 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 92 MADVIFNGSSARKPVSVA 109 >gi|217972880|ref|YP_002357631.1| chromosome segregation protein SMC [Shewanella baltica OS223] gi|217498015|gb|ACK46208.1| chromosome segregation protein SMC [Shewanella baltica OS223] Length = 1138 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARKPVSVA 78 >gi|160875871|ref|YP_001555187.1| chromosome segregation protein SMC [Shewanella baltica OS195] gi|160861393|gb|ABX49927.1| chromosome segregation protein SMC [Shewanella baltica OS195] Length = 1138 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARKPVSVA 78 >gi|153001198|ref|YP_001366879.1| chromosome segregation protein SMC [Shewanella baltica OS185] gi|151365816|gb|ABS08816.1| chromosome segregation protein SMC [Shewanella baltica OS185] Length = 1138 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARKPVSVA 78 >gi|126174868|ref|YP_001051017.1| chromosome segregation protein SMC [Shewanella baltica OS155] gi|125998073|gb|ABN62148.1| chromosome segregation protein SMC [Shewanella baltica OS155] Length = 1138 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARKPVSVA 78 >gi|319426764|gb|ADV54838.1| chromosome segregation protein SMC [Shewanella putrefaciens 200] Length = 1145 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|313124069|ref|YP_004034328.1| condensin subunit smc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280632|gb|ADQ61351.1| Condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 1186 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I+F +T + G NG GKS+++EAI W+ + + G + Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRN 60 Query: 87 IK---KRSIKTPMPMCMA 101 +K + P A Sbjct: 61 MKDVIFAGSQFRKPSNRA 78 >gi|301055338|ref|YP_003793549.1| chromosome segregation SMC protein [Bacillus anthracis CI] gi|300377507|gb|ADK06411.1| chromosome segregation SMC protein [Bacillus cereus biovar anthracis str. CI] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|294140432|ref|YP_003556410.1| SMC family protein [Shewanella violacea DSS12] gi|293326901|dbj|BAJ01632.1| SMC family protein [Shewanella violacea DSS12] Length = 1136 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDSTKIPFLNPLSAIIGPNGCGKSNIIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|291546253|emb|CBL19361.1| condensin subunit Smc [Ruminococcus sp. SR1/5] Length = 1086 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKNIEVQGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTELRKPLSFA 78 >gi|229061451|ref|ZP_04198796.1| Chromosome partition protein smc [Bacillus cereus AH603] gi|228717874|gb|EEL69522.1| Chromosome partition protein smc [Bacillus cereus AH603] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|42782940|ref|NP_980187.1| chromosome segregation SMC protein [Bacillus cereus ATCC 10987] gi|217961268|ref|YP_002339836.1| chromosome segregation SMC protein [Bacillus cereus AH187] gi|229140492|ref|ZP_04269047.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST26] gi|229197959|ref|ZP_04324673.1| Chromosome partition protein smc [Bacillus cereus m1293] gi|42738867|gb|AAS42795.1| chromosome segregation SMC protein [Bacillus cereus ATCC 10987] gi|217063100|gb|ACJ77350.1| chromosome segregation SMC protein [Bacillus cereus AH187] gi|228585438|gb|EEK43542.1| Chromosome partition protein smc [Bacillus cereus m1293] gi|228643053|gb|EEK99329.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST26] gi|324327745|gb|ADY23005.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|30263851|ref|NP_846228.1| chromosome segregation SMC protein [Bacillus anthracis str. Ames] gi|47529276|ref|YP_020625.1| chromosome segregation SMC protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186698|ref|YP_029950.1| chromosome segregation SMC protein [Bacillus anthracis str. Sterne] gi|65321176|ref|ZP_00394135.1| COG1196: Chromosome segregation ATPases [Bacillus anthracis str. A2012] gi|165873293|ref|ZP_02217901.1| chromosome segregation SMC protein [Bacillus anthracis str. A0488] gi|167642019|ref|ZP_02400250.1| chromosome segregation SMC protein [Bacillus anthracis str. A0193] gi|170709349|ref|ZP_02899764.1| chromosome segregation SMC protein [Bacillus anthracis str. A0389] gi|177655963|ref|ZP_02937115.1| chromosome segregation SMC protein [Bacillus anthracis str. A0174] gi|190565740|ref|ZP_03018659.1| chromosome segregation SMC protein [Bacillus anthracis Tsiankovskii-I] gi|227813244|ref|YP_002813253.1| chromosome segregation SMC protein [Bacillus anthracis str. CDC 684] gi|229602083|ref|YP_002868085.1| chromosome segregation SMC protein [Bacillus anthracis str. A0248] gi|254735886|ref|ZP_05193592.1| chromosome segregation SMC protein [Bacillus anthracis str. Western North America USA6153] gi|254751173|ref|ZP_05203212.1| chromosome segregation SMC protein [Bacillus anthracis str. Vollum] gi|254756721|ref|ZP_05208750.1| chromosome segregation SMC protein [Bacillus anthracis str. Australia 94] gi|30258495|gb|AAP27714.1| chromosome segregation SMC protein [Bacillus anthracis str. Ames] gi|47504424|gb|AAT33100.1| chromosome segregation SMC protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180625|gb|AAT56001.1| chromosome segregation SMC protein [Bacillus anthracis str. Sterne] gi|164710978|gb|EDR16547.1| chromosome segregation SMC protein [Bacillus anthracis str. A0488] gi|167510018|gb|EDR85433.1| chromosome segregation SMC protein [Bacillus anthracis str. A0193] gi|170125744|gb|EDS94656.1| chromosome segregation SMC protein [Bacillus anthracis str. A0389] gi|172079907|gb|EDT65014.1| chromosome segregation SMC protein [Bacillus anthracis str. A0174] gi|190562659|gb|EDV16625.1| chromosome segregation SMC protein [Bacillus anthracis Tsiankovskii-I] gi|227003537|gb|ACP13280.1| chromosome segregation SMC protein [Bacillus anthracis str. CDC 684] gi|229266491|gb|ACQ48128.1| chromosome segregation SMC protein [Bacillus anthracis str. A0248] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|228909673|ref|ZP_04073496.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 200] gi|228849962|gb|EEM94793.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 200] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229157424|ref|ZP_04285502.1| Chromosome partition protein smc [Bacillus cereus ATCC 4342] gi|228626151|gb|EEK82900.1| Chromosome partition protein smc [Bacillus cereus ATCC 4342] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|23098983|ref|NP_692449.1| chromosome segregation SMC protein [Oceanobacillus iheyensis HTE831] gi|22777211|dbj|BAC13484.1| chromosome segregation SMC protein [Oceanobacillus iheyensis HTE831] Length = 1188 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MYLKRLESKGFKSFAERIGVDFVSGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + +T + +A Sbjct: 61 MEDIIFQGSETRKALNVA 78 >gi|294791674|ref|ZP_06756822.1| putative cell division protein Smc [Veillonella sp. 6_1_27] gi|294456904|gb|EFG25266.1| putative cell division protein Smc [Veillonella sp. 6_1_27] Length = 1184 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|253701893|ref|YP_003023082.1| chromosome segregation protein SMC [Geobacter sp. M21] gi|251776743|gb|ACT19324.1| chromosome segregation protein SMC [Geobacter sp. M21] Length = 1176 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKIKRLEIHGFKSFQDKAVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKS 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ + P+ MA Sbjct: 61 MEDIIFGGTEFRKPLGMA 78 >gi|229092890|ref|ZP_04224024.1| Chromosome partition protein smc [Bacillus cereus Rock3-42] gi|228690512|gb|EEL44295.1| Chromosome partition protein smc [Bacillus cereus Rock3-42] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|222097293|ref|YP_002531350.1| chromosome segregation smc protein [Bacillus cereus Q1] gi|221241351|gb|ACM14061.1| chromosome segregation SMC protein [Bacillus cereus Q1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|218899001|ref|YP_002447412.1| chromosome segregation SMC protein [Bacillus cereus G9842] gi|218543105|gb|ACK95499.1| chromosome segregation SMC protein [Bacillus cereus G9842] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|197117352|ref|YP_002137779.1| chromosome segregation ATPase SMC [Geobacter bemidjiensis Bem] gi|197086712|gb|ACH37983.1| chromosome segregation ATPase SMC [Geobacter bemidjiensis Bem] Length = 1176 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI F+ F + ++F +T V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKIKRLEIHGFKSFQDKAVLDFNQPITGVVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKS 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ + P+ MA Sbjct: 61 MEDIIFGGTEFRKPLGMA 78 >gi|118479070|ref|YP_896221.1| condensin subunit Smc [Bacillus thuringiensis str. Al Hakam] gi|225865829|ref|YP_002751207.1| chromosome segregation SMC protein [Bacillus cereus 03BB102] gi|229186088|ref|ZP_04313257.1| Chromosome partition protein smc [Bacillus cereus BGSC 6E1] gi|118418295|gb|ABK86714.1| condensin subunit Smc [Bacillus thuringiensis str. Al Hakam] gi|225789332|gb|ACO29549.1| chromosome segregation SMC protein [Bacillus cereus 03BB102] gi|228597264|gb|EEK54915.1| Chromosome partition protein smc [Bacillus cereus BGSC 6E1] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|49478913|ref|YP_037909.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330469|gb|AAT61115.1| chromosome segregation SMC protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1189 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|303231138|ref|ZP_07317878.1| chromosome segregation protein SMC [Veillonella atypica ACS-049-V-Sch6] gi|302514269|gb|EFL56271.1| chromosome segregation protein SMC [Veillonella atypica ACS-049-V-Sch6] Length = 1184 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|257414054|ref|ZP_04745105.2| putative cell division protein Smc [Roseburia intestinalis L1-82] gi|257201360|gb|EEU99644.1| putative cell division protein Smc [Roseburia intestinalis L1-82] Length = 1190 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE+ F+ F +F + +T + G NG GKS++ +A+ W+ + ++ Sbjct: 2 RFSMYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLR 61 Query: 84 GDSIK---KRSIKTPMPMCMA 101 G S++ + P+ A Sbjct: 62 GASMQDIIFAGTENRKPLSYA 82 >gi|218904978|ref|YP_002452812.1| chromosome segregation SMC protein [Bacillus cereus AH820] gi|218536104|gb|ACK88502.1| chromosome segregation SMC protein [Bacillus cereus AH820] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|228902351|ref|ZP_04066508.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 4222] gi|228857320|gb|EEN01823.1| Chromosome partition protein smc [Bacillus thuringiensis IBL 4222] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|196042324|ref|ZP_03109600.1| chromosome segregation SMC protein [Bacillus cereus NVH0597-99] gi|196026846|gb|EDX65477.1| chromosome segregation SMC protein [Bacillus cereus NVH0597-99] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|218233136|ref|YP_002368649.1| chromosome segregation SMC protein [Bacillus cereus B4264] gi|218161093|gb|ACK61085.1| chromosome segregation SMC protein [Bacillus cereus B4264] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|30021936|ref|NP_833567.1| chromosome partition protein smc [Bacillus cereus ATCC 14579] gi|229129124|ref|ZP_04258097.1| Chromosome partition protein smc [Bacillus cereus BDRD-Cer4] gi|29897492|gb|AAP10768.1| Chromosome partition protein smc [Bacillus cereus ATCC 14579] gi|228654361|gb|EEL10226.1| Chromosome partition protein smc [Bacillus cereus BDRD-Cer4] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229152047|ref|ZP_04280242.1| Chromosome partition protein smc [Bacillus cereus m1550] gi|228631396|gb|EEK88030.1| Chromosome partition protein smc [Bacillus cereus m1550] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|86157102|ref|YP_463887.1| condensin subunit Smc [Anaeromyxobacter dehalogenans 2CP-C] gi|85773613|gb|ABC80450.1| condensin subunit Smc [Anaeromyxobacter dehalogenans 2CP-C] Length = 1199 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++I F+ F + + F D +T V G NG GKS+++++I W+ + R G S Sbjct: 1 MRIRRLDIVGFKSFMDKTVVAFDDGVTGVVGPNGCGKSNVADSIRWVLGEQSARHLRGRS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ MA Sbjct: 61 MEDVIFNGSESKPPLSMA 78 >gi|218778640|ref|YP_002429958.1| chromosome segregation protein SMC [Desulfatibacillum alkenivorans AK-01] gi|218760024|gb|ACL02490.1| chromosome segregation protein SMC [Desulfatibacillum alkenivorans AK-01] Length = 1191 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E+ F+ F + I F ++ V G NG GKS++ +AI+W+ R+ G S Sbjct: 1 MKLKQLELCGFKSFPDKTTIPFPGGVSAVVGPNGCGKSNIVDAIQWVTGEQRARQLRGKS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K+ P+ MA Sbjct: 61 MEDVIFSGSKSRPPVNMA 78 >gi|153003591|ref|YP_001377916.1| chromosome segregation protein SMC [Anaeromyxobacter sp. Fw109-5] gi|152027164|gb|ABS24932.1| chromosome segregation protein SMC [Anaeromyxobacter sp. Fw109-5] Length = 1198 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++I F+ F + + F + +T V G NG GKS++++AI W+ + R G S Sbjct: 1 MRIRRLDIVGFKSFMDKTVVAFDEGVTGVVGPNGCGKSNVADAIRWVLGEQSARHLRGRS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ MA Sbjct: 61 MEDVIFNGSESKPPLSMA 78 >gi|228940936|ref|ZP_04103495.1| Chromosome partition protein smc [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973865|ref|ZP_04134441.1| Chromosome partition protein smc [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980455|ref|ZP_04140765.1| Chromosome partition protein smc [Bacillus thuringiensis Bt407] gi|228779275|gb|EEM27532.1| Chromosome partition protein smc [Bacillus thuringiensis Bt407] gi|228785890|gb|EEM33893.1| Chromosome partition protein smc [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818772|gb|EEM64838.1| Chromosome partition protein smc [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941617|gb|AEA17513.1| chromosome partition protein smc [Bacillus thuringiensis serovar chinensis CT-43] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229071346|ref|ZP_04204569.1| Chromosome partition protein smc [Bacillus cereus F65185] gi|229081103|ref|ZP_04213613.1| Chromosome partition protein smc [Bacillus cereus Rock4-2] gi|228702147|gb|EEL54623.1| Chromosome partition protein smc [Bacillus cereus Rock4-2] gi|228711800|gb|EEL63752.1| Chromosome partition protein smc [Bacillus cereus F65185] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229146419|ref|ZP_04274790.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST24] gi|228637052|gb|EEK93511.1| Chromosome partition protein smc [Bacillus cereus BDRD-ST24] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229180124|ref|ZP_04307468.1| Chromosome partition protein smc [Bacillus cereus 172560W] gi|228603333|gb|EEK60810.1| Chromosome partition protein smc [Bacillus cereus 172560W] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|312871900|ref|ZP_07731984.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 3008A-a] gi|325913419|ref|ZP_08175785.1| chromosome segregation protein SMC [Lactobacillus iners UPII 60-B] gi|311092622|gb|EFQ50982.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 3008A-a] gi|325477188|gb|EGC80334.1| chromosome segregation protein SMC [Lactobacillus iners UPII 60-B] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|259501534|ref|ZP_05744436.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|302191493|ref|ZP_07267747.1| chromosome segregation protein SMC [Lactobacillus iners AB-1] gi|259167052|gb|EEW51547.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|228960064|ref|ZP_04121728.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799580|gb|EEM46533.1| Chromosome partition protein smc [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229047535|ref|ZP_04193125.1| Chromosome partition protein smc [Bacillus cereus AH676] gi|229111319|ref|ZP_04240872.1| Chromosome partition protein smc [Bacillus cereus Rock1-15] gi|228672095|gb|EEL27386.1| Chromosome partition protein smc [Bacillus cereus Rock1-15] gi|228723782|gb|EEL75137.1| Chromosome partition protein smc [Bacillus cereus AH676] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229162784|ref|ZP_04290741.1| Chromosome partition protein smc [Bacillus cereus R309803] gi|228620666|gb|EEK77535.1| Chromosome partition protein smc [Bacillus cereus R309803] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|52141633|ref|YP_085189.1| chromosome segregation SMC protein [Bacillus cereus E33L] gi|51975102|gb|AAU16652.1| chromosome segregation SMC protein [Bacillus cereus E33L] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|323489555|ref|ZP_08094782.1| chromosome partition protein smc [Planococcus donghaensis MPA1U2] gi|323396686|gb|EGA89505.1| chromosome partition protein smc [Planococcus donghaensis MPA1U2] Length = 1182 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEVMGFKSFADRIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFAGSDSRKPLNFA 78 >gi|312874415|ref|ZP_07734445.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2052A-d] gi|325911851|ref|ZP_08174255.1| chromosome segregation protein SMC [Lactobacillus iners UPII 143-D] gi|311090027|gb|EFQ48441.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2052A-d] gi|325476357|gb|EGC79519.1| chromosome segregation protein SMC [Lactobacillus iners UPII 143-D] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|331002415|ref|ZP_08325933.1| chromosome segregation protein SMC [Lachnospiraceae oral taxon 107 str. F0167] gi|330410231|gb|EGG89665.1| chromosome segregation protein SMC [Lachnospiraceae oral taxon 107 str. F0167] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F +F + +T + G NG GKS++S+A+ W+ + ++ G + Sbjct: 1 MYLKRIEIQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVSDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTELRKPLGFA 78 >gi|32328841|emb|CAD66596.2| SMC protein [Desulfitobacterium hafniense] Length = 1205 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A L L I I F+ F + K+E L++V G NG GKS++++AI W+ + + Sbjct: 11 ADTLPVFLKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKN 70 Query: 82 KHGDSI---KKRSIKTPMPMCMA 101 G + P+ MA Sbjct: 71 LRGSKMEDVIFSGSSVRRPVGMA 93 >gi|89895401|ref|YP_518888.1| hypothetical protein DSY2655 [Desulfitobacterium hafniense Y51] gi|89334849|dbj|BAE84444.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 1198 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A L L I I F+ F + K+E L++V G NG GKS++++AI W+ + + Sbjct: 4 ADTLPVFLKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKN 63 Query: 82 KHGDSI---KKRSIKTPMPMCMA 101 G + P+ MA Sbjct: 64 LRGSKMEDVIFSGSSVRRPVGMA 86 >gi|219669829|ref|YP_002460264.1| chromosome segregation protein SMC [Desulfitobacterium hafniense DCB-2] gi|219540089|gb|ACL21828.1| chromosome segregation protein SMC [Desulfitobacterium hafniense DCB-2] Length = 1198 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A L L I I F+ F + K+E L++V G NG GKS++++AI W+ + + Sbjct: 4 ADTLPVFLKSITIQGFKSFADKVKLELGQGLSVVVGPNGSGKSNVADAIRWVLGEQSAKN 63 Query: 82 KHGDSI---KKRSIKTPMPMCMA 101 G + P+ MA Sbjct: 64 LRGSKMEDVIFSGSSVRRPVGMA 86 >gi|315653377|ref|ZP_07906299.1| chromosome segregation protein Smc [Lactobacillus iners ATCC 55195] gi|315489302|gb|EFU78942.1| chromosome segregation protein Smc [Lactobacillus iners ATCC 55195] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|229117334|ref|ZP_04246712.1| Chromosome partition protein smc [Bacillus cereus Rock1-3] gi|228666234|gb|EEL21698.1| Chromosome partition protein smc [Bacillus cereus Rock1-3] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T + +A Sbjct: 61 MEDVIFAGSETRRAVNVA 78 >gi|312874531|ref|ZP_07734556.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2053A-b] gi|311089922|gb|EFQ48341.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2053A-b] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|294500964|ref|YP_003564664.1| chromosome segregation protein SMC [Bacillus megaterium QM B1551] gi|294350901|gb|ADE71230.1| chromosome segregation protein SMC [Bacillus megaterium QM B1551] Length = 1186 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDIAGFKSFAEKVSIDFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I ++ + +A Sbjct: 61 MEDIIFAGSESRRAVNVA 78 >gi|228992576|ref|ZP_04152503.1| Chromosome partition protein smc [Bacillus pseudomycoides DSM 12442] gi|228767210|gb|EEM15846.1| Chromosome partition protein smc [Bacillus pseudomycoides DSM 12442] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIVGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|229086401|ref|ZP_04218577.1| Chromosome partition protein smc [Bacillus cereus Rock3-44] gi|228696917|gb|EEL49726.1| Chromosome partition protein smc [Bacillus cereus Rock3-44] Length = 1190 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRKAVNVA 78 >gi|229104410|ref|ZP_04235079.1| Chromosome partition protein smc [Bacillus cereus Rock3-28] gi|228679108|gb|EEL33316.1| Chromosome partition protein smc [Bacillus cereus Rock3-28] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T + +A Sbjct: 61 MEDVIFAGSETRRAVNVA 78 >gi|228998624|ref|ZP_04158211.1| Chromosome partition protein smc [Bacillus mycoides Rock3-17] gi|229006124|ref|ZP_04163812.1| Chromosome partition protein smc [Bacillus mycoides Rock1-4] gi|228755200|gb|EEM04557.1| Chromosome partition protein smc [Bacillus mycoides Rock1-4] gi|228761092|gb|EEM10051.1| Chromosome partition protein smc [Bacillus mycoides Rock3-17] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIVGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|313892797|ref|ZP_07826378.1| chromosome segregation protein SMC [Veillonella sp. oral taxon 158 str. F0412] gi|313442728|gb|EFR61139.1| chromosome segregation protein SMC [Veillonella sp. oral taxon 158 str. F0412] Length = 1184 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|295706310|ref|YP_003599385.1| chromosome segregation protein SMC [Bacillus megaterium DSM 319] gi|294803969|gb|ADF41035.1| chromosome segregation protein SMC [Bacillus megaterium DSM 319] Length = 1186 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDIAGFKSFAEKVSIDFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I ++ + +A Sbjct: 61 MEDIIFAGSESRRAVNVA 78 >gi|315652048|ref|ZP_07905049.1| chromosome segregation protein Smc [Eubacterium saburreum DSM 3986] gi|315485695|gb|EFU76076.1| chromosome segregation protein Smc [Eubacterium saburreum DSM 3986] Length = 1185 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F +F + +T + G NG GKS++S+A+ W+ + ++ G + Sbjct: 1 MYLKRIEIQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVSDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTELRKPLGFA 78 >gi|313106531|ref|ZP_07792760.1| putative chromosome segregation protein [Pseudomonas aeruginosa 39016] gi|310879262|gb|EFQ37856.1| putative chromosome segregation protein [Pseudomonas aeruginosa 39016] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|296390106|ref|ZP_06879581.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PAb1] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|238019506|ref|ZP_04599932.1| hypothetical protein VEIDISOL_01375 [Veillonella dispar ATCC 17748] gi|237864205|gb|EEP65495.1| hypothetical protein VEIDISOL_01375 [Veillonella dispar ATCC 17748] Length = 1184 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ R G Sbjct: 1 MQLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|107100958|ref|ZP_01364876.1| hypothetical protein PaerPA_01001988 [Pseudomonas aeruginosa PACS2] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|152985977|ref|YP_001349160.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PA7] gi|150961135|gb|ABR83160.1| chromosome segregation protein SMC [Pseudomonas aeruginosa PA7] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|15596724|ref|NP_250218.1| hypothetical protein PA1527 [Pseudomonas aeruginosa PAO1] gi|9947485|gb|AAG04916.1|AE004581_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|254239876|ref|ZP_04933198.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126193254|gb|EAZ57317.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|218892515|ref|YP_002441384.1| putative chromosome segregation protein [Pseudomonas aeruginosa LESB58] gi|254234622|ref|ZP_04927945.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126166553|gb|EAZ52064.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218772743|emb|CAW28528.1| putative chromosome segregation protein [Pseudomonas aeruginosa LESB58] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|116049471|ref|YP_791726.1| putative chromosome segregation protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115584692|gb|ABJ10707.1| putative chromosome segregation protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 1162 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVSQA 78 >gi|229098317|ref|ZP_04229264.1| Chromosome partition protein smc [Bacillus cereus Rock3-29] gi|228685215|gb|EEL39146.1| Chromosome partition protein smc [Bacillus cereus Rock3-29] Length = 1189 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T + +A Sbjct: 61 MEDVIFAGSETRRAVNVA 78 >gi|330836477|ref|YP_004411118.1| SMC domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748380|gb|AEC01736.1| SMC domain protein [Spirochaeta coccoides DSM 17374] Length = 948 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + K++FAD +T + G NG GKS++ ++I+W+ + + Sbjct: 1 MFLKTLEMIGFKSFADKTKLDFADGITCLLGPNGCGKSNIVDSIKWVLGEQSTKALRASR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + PM A Sbjct: 61 MDDVIFNGTDNRKPMGFA 78 >gi|330832995|ref|YP_004401820.1| chromosome partition protein [Streptococcus suis ST3] gi|329307218|gb|AEB81634.1| chromosome partition protein [Streptococcus suis ST3] Length = 1177 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDVIFSGTESRKALNYA 78 >gi|253755370|ref|YP_003028510.1| chromosome partition protein [Streptococcus suis BM407] gi|251817834|emb|CAZ55587.1| putative chromosome partition protein [Streptococcus suis BM407] Length = 1177 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDVIFSGTESRKALNYA 78 >gi|146318844|ref|YP_001198556.1| chromosome segregation ATPase [Streptococcus suis 05ZYH33] gi|146321054|ref|YP_001200765.1| chromosome segregation ATPase [Streptococcus suis 98HAH33] gi|253751929|ref|YP_003025070.1| chromosome partition protein [Streptococcus suis SC84] gi|253753752|ref|YP_003026893.1| chromosome partition protein [Streptococcus suis P1/7] gi|145689650|gb|ABP90156.1| Chromosome segregation ATPase [Streptococcus suis 05ZYH33] gi|145691860|gb|ABP92365.1| Chromosome segregation ATPase [Streptococcus suis 98HAH33] gi|251816218|emb|CAZ51845.1| putative chromosome partition protein [Streptococcus suis SC84] gi|251819998|emb|CAR46158.1| putative chromosome partition protein [Streptococcus suis P1/7] gi|292558505|gb|ADE31506.1| SMC protein [Streptococcus suis GZ1] gi|319758291|gb|ADV70233.1| chromosome segregation ATPase [Streptococcus suis JS14] Length = 1177 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDVIFSGTESRKALNYA 78 >gi|223932806|ref|ZP_03624803.1| chromosome segregation protein SMC [Streptococcus suis 89/1591] gi|302023943|ref|ZP_07249154.1| chromosome segregation protein SMC [Streptococcus suis 05HAS68] gi|223898515|gb|EEF64879.1| chromosome segregation protein SMC [Streptococcus suis 89/1591] Length = 1177 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDVIFSGTESRKALNYA 78 >gi|312872435|ref|ZP_07732504.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2062A-h1] gi|311092017|gb|EFQ50392.1| chromosome segregation protein SMC [Lactobacillus iners LEAF 2062A-h1] Length = 1185 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|329921149|ref|ZP_08277671.1| chromosome segregation protein SMC [Lactobacillus iners SPIN 1401G] gi|328934787|gb|EGG31278.1| chromosome segregation protein SMC [Lactobacillus iners SPIN 1401G] Length = 1185 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|313906053|ref|ZP_07839405.1| chromosome segregation protein SMC [Eubacterium cellulosolvens 6] gi|313469098|gb|EFR64448.1| chromosome segregation protein SMC [Eubacterium cellulosolvens 6] Length = 1186 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K+EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKSIEMQGFKSFAMKTKLEFDNGVTGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTQNRKPLGFA 78 >gi|309809478|ref|ZP_07703336.1| putative chromosome partition protein smc [Lactobacillus iners SPIN 2503V10-D] gi|308170150|gb|EFO72185.1| putative chromosome partition protein smc [Lactobacillus iners SPIN 2503V10-D] Length = 743 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|291522184|emb|CBK80477.1| condensin subunit Smc [Coprococcus catus GD/7] Length = 1188 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MFLKSIEVQGFKSFANKMVFEFHKGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ A Sbjct: 61 MEDVIFSGTESRKPLGFA 78 >gi|300214419|gb|ADJ78835.1| Chromosome partition protein [Lactobacillus salivarius CECT 5713] Length = 861 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + ++ F+ F I F D LT + G NG GKS+++EA+ W+ + + G Sbjct: 1 MKIKSLTLNGFKSFANKTIINFQDGLTGIVGPNGSGKSNITEALRWVLGEQSVKNLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T + A Sbjct: 61 MPDIIFAGSDTRAALNRA 78 >gi|120598460|ref|YP_963034.1| chromosome segregation protein SMC [Shewanella sp. W3-18-1] gi|146293462|ref|YP_001183886.1| chromosome segregation protein SMC [Shewanella putrefaciens CN-32] gi|120558553|gb|ABM24480.1| chromosome segregation protein SMC [Shewanella sp. W3-18-1] gi|145565152|gb|ABP76087.1| chromosome segregation protein SMC [Shewanella putrefaciens CN-32] Length = 1145 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F LT + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDSTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|168698986|ref|ZP_02731263.1| chromosome partition protein Smc [Gemmata obscuriglobus UQM 2246] Length = 1231 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L +E+ F+ F + + +FA +T V G NG GKS++ +A+ W+ + + G + Sbjct: 2 LKRLELVGFKSFADKTRFDFAPGVTGVVGPNGSGKSNVVDAVRWILGEQSPKSLRGGEMA 61 Query: 88 --KKRSIKTPMPMCMA 101 + + MA Sbjct: 62 DVIFNGSSSRKSLGMA 77 >gi|158320493|ref|YP_001513000.1| chromosome segregation protein SMC [Alkaliphilus oremlandii OhILAs] gi|158140692|gb|ABW19004.1| chromosome segregation protein SMC [Alkaliphilus oremlandii OhILAs] Length = 1194 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F +I F +T V G NG GKS++S++I W+ + + G Sbjct: 1 MQLKKLEIQGFKSFANKIEINFESGITGVVGPNGSGKSNISDSIRWVLGEQSAKTLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MEDVIFSGAADRKPLGMA 78 >gi|309804249|ref|ZP_07698326.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 11V1-d] gi|308163652|gb|EFO65922.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 11V1-d] Length = 743 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|240047686|ref|YP_002961074.1| putative ABC transporter ATP-binding protein P [Mycoplasma conjunctivae HRC/581] gi|239985258|emb|CAT05271.1| Putative ABC transporter ATP-binding protein P [Mycoplasma conjunctivae] Length = 980 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL+ IEI F+ F + I F + + G NG GKS++++AI W+ + ++ G Sbjct: 1 MKLIKIEIEGFKSFADPVSIAFDGSVVGIVGPNGSGKSNINDAIRWVLGEKSVKQLRGSN 60 Query: 85 -DSIKKRSIKTPMPMCMAVPRCKYQLK 110 D + KT P+ A+ R ++ K Sbjct: 61 MDDVIFAGSKTVKPLDKAMVRLTFEDK 87 >gi|152976214|ref|YP_001375731.1| chromosome segregation protein SMC [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024966|gb|ABS22736.1| chromosome segregation protein SMC [Bacillus cytotoxicus NVH 391-98] Length = 1189 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVAVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|158521730|ref|YP_001529600.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3] gi|158510556|gb|ABW67523.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3] Length = 1204 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +EI+ F+ F E I F + + G NG GKS++ +A++W+ + + G Sbjct: 1 MRLKRLEINGFKSFPEKATISFPPGIFSIVGPNGCGKSNIIDALKWVMGEQSAMQLRGKS 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ MA Sbjct: 61 MDDVIFAGSNEKAPVNMA 78 >gi|331084977|ref|ZP_08334064.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408677|gb|EGG88142.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 9_1_43BFAA] Length = 1186 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRRPLSYA 78 >gi|325290419|ref|YP_004266600.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] gi|324965820|gb|ADY56599.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] Length = 1198 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R L + I F+ F + K+EF + ++ G NG GKS++++A+ W+ + + Sbjct: 5 RDTCIFLKALHIQGFKSFADKLKLEFGAGMCVIVGPNGSGKSNVADAVRWVLGEQSVKSL 64 Query: 83 HGDSI---KKRSIKTPMPMCMA 101 G + P+ MA Sbjct: 65 RGSKMEDVIFSGSSARRPVGMA 86 >gi|172057913|ref|YP_001814373.1| chromosome segregation protein SMC [Exiguobacterium sibiricum 255-15] gi|171990434|gb|ACB61356.1| chromosome segregation protein SMC [Exiguobacterium sibiricum 255-15] Length = 1189 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI+ F+ F +++F +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MYLKRIEINGFKSFASRTELDFLPGVTAVVGPNGSGKSNISDAVRWVLGEQSAKSLRGAK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|56964062|ref|YP_175793.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16] gi|56910305|dbj|BAD64832.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16] Length = 1188 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F E ++F +T V G NG GKS++++A+ W+ + R G Sbjct: 1 MFLKRLEVKGFKSFAEPILVDFVPGVTAVVGPNGSGKSNIADAVRWVLGEQSARSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + MA Sbjct: 61 MEDIIFAGSDSRKAVNMA 78 >gi|329770216|ref|ZP_08261606.1| chromosome segregation protein SMC [Gemella sanguinis M325] gi|328837022|gb|EGF86666.1| chromosome segregation protein SMC [Gemella sanguinis M325] Length = 1184 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI+ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKLSKVEITGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSS 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|227872402|ref|ZP_03990749.1| possible SMC structural maintenance of chromosomes partitioning protein [Oribacterium sinus F0268] gi|227841762|gb|EEJ52045.1| possible SMC structural maintenance of chromosomes partitioning protein [Oribacterium sinus F0268] Length = 1087 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F ++F+ +T + G NG GKS++S+A+ W+ ++ G+S Sbjct: 1 MYLKSIEIQGFKSFANKTVLDFSPGITGIVGPNGSGKSNISDAVRWVLGEQKVKQLRGNS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|331089417|ref|ZP_08338316.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 3_1_46FAA] gi|330404785|gb|EGG84323.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 3_1_46FAA] Length = 1186 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|322385040|ref|ZP_08058690.1| cell division protein Smc [Streptococcus cristatus ATCC 51100] gi|321270950|gb|EFX53860.1| cell division protein Smc [Streptococcus cristatus ATCC 51100] Length = 1178 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTENRKPLNYA 78 >gi|160872306|ref|ZP_02062438.1| chromosome segregation protein SMC [Rickettsiella grylli] gi|159121105|gb|EDP46443.1| chromosome segregation protein SMC [Rickettsiella grylli] Length = 1176 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L I+++ F+ F + + F +LT V G NG GKS++ +AI W+ + ++ G Sbjct: 1 MRLESIQLAGFKSFVDPTIVSFPTNLTAVVGPNGCGKSNIIDAIRWVMGESSAKQLRGES 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T P+ A Sbjct: 61 LDDVIFNGCHTRKPLGRA 78 >gi|317500482|ref|ZP_07958706.1| chromosome segregation protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316898237|gb|EFV20284.1| chromosome segregation protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 1186 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|239995020|ref|ZP_04715544.1| Chromosome segregation ATPase, sms [Alteromonas macleodii ATCC 27126] Length = 1175 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E I F +T + G NG GKS++ +A+ W+ + + GD+ Sbjct: 1 MRLKKIKLAGFKSFVEPTTIPFLGEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 MTDVIFNGSSSRKP----VGQCSVEL 82 >gi|153816162|ref|ZP_01968830.1| hypothetical protein RUMTOR_02410 [Ruminococcus torques ATCC 27756] gi|145846497|gb|EDK23415.1| hypothetical protein RUMTOR_02410 [Ruminococcus torques ATCC 27756] Length = 1186 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F K +F + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|91202833|emb|CAJ72472.1| similar to structural maintenance of chromosome (smc) seggregation ATPase protein [Candidatus Kuenenia stuttgartiensis] Length = 1207 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E+ F+ F E ++ F D + ++ G NG GKS++ +A++W+ + + G+ Sbjct: 1 MKLKKLELFGFKSFAEKTEVVFEDGINVIVGPNGCGKSNIVDAVKWVLGEQSVKSLRGNE 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|329122026|ref|ZP_08250635.1| hypothetical protein HMPREF9083_1097 [Dialister micraerophilus DSM 19965] gi|327467078|gb|EGF12590.1| hypothetical protein HMPREF9083_1097 [Dialister micraerophilus DSM 19965] Length = 424 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KLL + + F+ F + IEF+D +T++ G NG GKS++S+A+ W+ R G Sbjct: 1 MKLLRLTMQGFKSFADKTTIEFSDGMTVIVGPNGCGKSNISDAVRWVLGEQNVRNLRGQK 60 Query: 85 -DSIKKRSIKT 94 + I +T Sbjct: 61 SEDIIFSGSET 71 >gi|225571977|ref|ZP_03780841.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM 10507] gi|225040510|gb|EEG50756.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM 10507] Length = 1186 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IE+ F+ F + EF + +T + G NG GKS++ +A+ W+ + ++ G + Sbjct: 1 MYLKNIEVYGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|262375657|ref|ZP_06068889.1| chromosome segregation protein SMC [Acinetobacter lwoffii SH145] gi|262309260|gb|EEY90391.1| chromosome segregation protein SMC [Acinetobacter lwoffii SH145] Length = 1150 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F D+ T V G NG GKS++ +AI W+ + R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLHFKDNRTAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ MA Sbjct: 61 MQDVIFTGTAKRKPVGMA 78 >gi|239636287|ref|ZP_04677289.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] gi|239597642|gb|EEQ80137.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] Length = 1189 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAVGFKSFADHTDVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SI---KKRSIKTPMPMCMAVPRCK 106 + + P A + K Sbjct: 61 KMEDIIFSGAEHRKPQNFAEVKLK 84 >gi|121533799|ref|ZP_01665626.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1] gi|121307790|gb|EAX48705.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1] Length = 1185 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + ++EF +T + G NG GKS++++AI W R G Sbjct: 1 MLLRKLELYGFKSFADKTEVEFGPGITAIVGPNGSGKSNITDAIRWALGEQNIRNLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + P+ +A Sbjct: 61 VEDVIFAGSAKRRPLGVA 78 >gi|75762037|ref|ZP_00741949.1| Chromosome partition protein smc [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490483|gb|EAO53787.1| Chromosome partition protein smc [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 971 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAERVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|315185663|gb|EFU19431.1| chromosome segregation protein SMC [Spirochaeta thermophila DSM 6578] Length = 927 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L +E+ F+ F E +IEF + +T + G NG GKS++ +AI+W+ + + S+ Sbjct: 3 LKAVELFGFKSFGEKTRIEFREGVTAIVGPNGCGKSNIVDAIKWVLGEQSTKTLRTSSME 62 Query: 88 --KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 63 EVIFNGTEDRKPLNVA 78 >gi|167630241|ref|YP_001680740.1| chromosome partition protein smc, putative [Heliobacterium modesticaldum Ice1] gi|167592981|gb|ABZ84729.1| chromosome partition protein smc, putative [Heliobacterium modesticaldum Ice1] Length = 1190 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + +I + LT+V G NG GKS++++AI W+ + R G Sbjct: 1 MVLKRIELNGFKSFADKTEILLSPGLTVVVGPNGSGKSNVADAIRWVLGEQSPRSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MEDVIFAGSDRRKPVGMA 78 >gi|148263167|ref|YP_001229873.1| chromosome segregation protein SMC [Geobacter uraniireducens Rf4] gi|146396667|gb|ABQ25300.1| condensin subunit Smc [Geobacter uraniireducens Rf4] Length = 1176 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K+ ++I F+ F + ++F +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MKIKRLDILGFKSFHDKVSLDFQQGITGIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKQ 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ +A Sbjct: 61 MEDIIFGGSECRKPLGLA 78 >gi|229192017|ref|ZP_04318987.1| Chromosome partition protein smc [Bacillus cereus ATCC 10876] gi|228591568|gb|EEK49417.1| Chromosome partition protein smc [Bacillus cereus ATCC 10876] Length = 1189 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI+ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEIAGFKSFAEHVSVDFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T + +A Sbjct: 61 MEDIIFAGSDTRRAVNVA 78 >gi|95929904|ref|ZP_01312645.1| Chromosome segregation protein SMC [Desulfuromonas acetoxidans DSM 684] gi|95134200|gb|EAT15858.1| Chromosome segregation protein SMC [Desulfuromonas acetoxidans DSM 684] Length = 1170 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ IEI F+ F + + F +T + G NG GKS++ +AI W + G + Sbjct: 1 MKIKRIEIIGFKSFVDRTVLNFEPGVTAILGPNGCGKSNVIDAIRWAMGEQNAKNLRGQA 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ K P MA Sbjct: 61 MEDVIFGGSKKRRPHGMA 78 >gi|160915313|ref|ZP_02077526.1| hypothetical protein EUBDOL_01322 [Eubacterium dolichum DSM 3991] gi|158433112|gb|EDP11401.1| hypothetical protein EUBDOL_01322 [Eubacterium dolichum DSM 3991] Length = 978 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I F + + G NG GKS++++AI W+ + + G+S Sbjct: 1 MFLKRIELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGNS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MSDVIFNGSAQRKPVNMA 78 >gi|218132445|ref|ZP_03461249.1| hypothetical protein BACPEC_00304 [Bacteroides pectinophilus ATCC 43243] gi|217992555|gb|EEC58557.1| hypothetical protein BACPEC_00304 [Bacteroides pectinophilus ATCC 43243] Length = 1191 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKSIEVQGFKSFANKIVFEFNNGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGTK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ A Sbjct: 61 MEDIIFAGTQMRKPVGFA 78 >gi|210612576|ref|ZP_03289367.1| hypothetical protein CLONEX_01569 [Clostridium nexile DSM 1787] gi|210151501|gb|EEA82508.1| hypothetical protein CLONEX_01569 [Clostridium nexile DSM 1787] Length = 1186 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|330502844|ref|YP_004379713.1| condensin subunit Smc [Pseudomonas mendocina NK-01] gi|328917130|gb|AEB57961.1| condensin subunit Smc [Pseudomonas mendocina NK-01] Length = 1162 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVTQA 78 >gi|327480470|gb|AEA83780.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri DSM 4166] Length = 1162 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVTQA 78 >gi|307718735|ref|YP_003874267.1| chromosome partition protein SmC [Spirochaeta thermophila DSM 6192] gi|306532460|gb|ADN01994.1| putative chromosome partition protein SmC [Spirochaeta thermophila DSM 6192] Length = 927 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L +E+ F+ F E +IEF + +T + G NG GKS++ +AI+W+ + + S+ Sbjct: 3 LKAVELFGFKSFGEKTRIEFREGVTAIVGPNGCGKSNIVDAIKWVLGEQSTKTLRTSSME 62 Query: 88 --KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 63 EVIFNGTEDRKPLNVA 78 >gi|146282218|ref|YP_001172371.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] gi|145570423|gb|ABP79529.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] Length = 1162 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVTQA 78 >gi|146307770|ref|YP_001188235.1| condensin subunit Smc [Pseudomonas mendocina ymp] gi|145575971|gb|ABP85503.1| condensin subunit Smc [Pseudomonas mendocina ymp] Length = 1162 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVTQA 78 >gi|331091060|ref|ZP_08339902.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 2_1_46FAA] gi|330405282|gb|EGG84818.1| chromosome segregation protein SMC [Lachnospiraceae bacterium 2_1_46FAA] Length = 1186 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|326803886|ref|YP_004321704.1| chromosome segregation protein SMC [Aerococcus urinae ACS-120-V-Col10a] gi|326650714|gb|AEA00897.1| chromosome segregation protein SMC [Aerococcus urinae ACS-120-V-Col10a] Length = 1186 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F E ++E T + G NG GKS+++EA++W+ + + G Sbjct: 1 MYLKTIEMVGFKSFAEKTRVELDQGFTAIVGPNGSGKSNITEAVKWVLGEQSAKSLRGKR 60 Query: 85 -DSIKKRSIKTPMP 97 D + ++ Sbjct: 61 MDDVIFSGSQSRRQ 74 >gi|325661267|ref|ZP_08149894.1| hypothetical protein HMPREF0490_00627 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472774|gb|EGC75985.1| hypothetical protein HMPREF0490_00627 [Lachnospiraceae bacterium 4_1_37FAA] Length = 396 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEVQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRRPLSYA 78 >gi|313891627|ref|ZP_07825234.1| chromosome segregation protein SMC [Dialister microaerophilus UPII 345-E] gi|313119905|gb|EFR43090.1| chromosome segregation protein SMC [Dialister microaerophilus UPII 345-E] Length = 1185 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KLL + + F+ F + IEF+D +T++ G NG GKS++S+A+ W+ R G Sbjct: 1 MKLLRLTMQGFKSFADKTTIEFSDGMTVIVGPNGCGKSNISDAVRWVLGEQNVRNLRGQK 60 Query: 85 -DSIKKRSIKT 94 + I +T Sbjct: 61 SEDIIFSGSET 71 >gi|317052010|ref|YP_004113126.1| chromosome segregation protein SMC [Desulfurispirillum indicum S5] gi|316947094|gb|ADU66570.1| chromosome segregation protein SMC [Desulfurispirillum indicum S5] Length = 1150 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K +EIS F+ F+E ++F D +T + G NG GKS++S+AI W+ + G S Sbjct: 1 MKFKRLEISGFKSFSERSVLDFRDGITAIVGPNGCGKSNISDAIRWVMGEQRAKDLRGAS 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQ 108 + + P MA + K + Sbjct: 61 MADVIFAGTQRRSPAQMAEVKLKLE 85 >gi|319787336|ref|YP_004146811.1| chromosome segregation protein SMC [Pseudoxanthomonas suwonensis 11-1] gi|317465848|gb|ADV27580.1| chromosome segregation protein SMC [Pseudoxanthomonas suwonensis 11-1] Length = 1178 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS Sbjct: 12 MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 71 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ MA Sbjct: 72 LTDVIFSGSSARKPVSMA 89 >gi|302670932|ref|YP_003830892.1| chromosome segregation protein Smc [Butyrivibrio proteoclasticus B316] gi|302395405|gb|ADL34310.1| chromosome segregation protein Smc [Butyrivibrio proteoclasticus B316] Length = 1185 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F K +F + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIHGFKSFANKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTELRKPLGYA 78 >gi|296133562|ref|YP_003640809.1| chromosome segregation protein SMC [Thermincola sp. JR] gi|296032140|gb|ADG82908.1| chromosome segregation protein SMC [Thermincola potens JR] Length = 1189 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ + ++ F +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MYLKRLEIQGFKSLADRTELYFNPGITAVVGPNGSGKSNISDAIRWVLGEQSAKILRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + P+ MA Sbjct: 61 MEDVIFSGSDKRKPVGMA 78 >gi|125973444|ref|YP_001037354.1| condensin subunit Smc [Clostridium thermocellum ATCC 27405] gi|125713669|gb|ABN52161.1| condensin subunit Smc [Clostridium thermocellum ATCC 27405] Length = 1190 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++EF +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MHLKRLEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVLGEQSAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + PM A Sbjct: 61 MEDVIFAGTEHRKPMGFA 78 >gi|329117065|ref|ZP_08245782.1| chromosome segregation protein SMC [Streptococcus parauberis NCFD 2020] gi|326907470|gb|EGE54384.1| chromosome segregation protein SMC [Streptococcus parauberis NCFD 2020] Length = 1181 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + KIEF +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLRRIEMQGFKSFADKTKIEFDKGVTAVVGPNGSGKSNVTESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + A Sbjct: 61 MPDIIFAGTESRNALNFA 78 >gi|302874774|ref|YP_003843407.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] gi|307690610|ref|ZP_07633056.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] gi|302577631|gb|ADL51643.1| chromosome segregation protein SMC [Clostridium cellulovorans 743B] Length = 1191 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + +IE D +T + G NG GKS++S+AI W+ + + G Sbjct: 1 MYLKAIELRGFKSFADKTEIELKDGITAIVGPNGSGKSNISDAIRWVLGEQSVKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|281417644|ref|ZP_06248664.1| chromosome segregation protein SMC [Clostridium thermocellum JW20] gi|281409046|gb|EFB39304.1| chromosome segregation protein SMC [Clostridium thermocellum JW20] gi|316940319|gb|ADU74353.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 1313] Length = 1190 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++EF +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MHLKRLEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVLGEQSAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + PM A Sbjct: 61 MEDVIFAGTEHRKPMGFA 78 >gi|329767728|ref|ZP_08259244.1| chromosome segregation protein SMC [Gemella haemolysans M341] gi|328838829|gb|EGF88423.1| chromosome segregation protein SMC [Gemella haemolysans M341] Length = 1184 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKLAKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSS 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|241888878|ref|ZP_04776184.1| chromosome segregation protein SMC [Gemella haemolysans ATCC 10379] gi|241864554|gb|EER68930.1| chromosome segregation protein SMC [Gemella haemolysans ATCC 10379] Length = 1184 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKLAKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSS 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|223986251|ref|ZP_03636266.1| hypothetical protein HOLDEFILI_03576 [Holdemania filiformis DSM 12042] gi|223961777|gb|EEF66274.1| hypothetical protein HOLDEFILI_03576 [Holdemania filiformis DSM 12042] Length = 979 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I+F +T + G NG GKS++++AI W+ + + G++ Sbjct: 1 MFLKRIEMQGFKSFADKVVIQFDHDVTGIVGPNGCGKSNITDAIRWVLGEQSVKSLRGNA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MTDVIFAGSADRRMVNMA 78 >gi|258539822|ref|YP_003174321.1| chromosome partition protein smc [Lactobacillus rhamnosus Lc 705] gi|257151498|emb|CAR90470.1| Chromosome partition protein smc [Lactobacillus rhamnosus Lc 705] Length = 1184 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MELKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|229552451|ref|ZP_04441176.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus rhamnosus LMS2-1] gi|229314188|gb|EEN80161.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus rhamnosus LMS2-1] Length = 1184 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MELKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|199597131|ref|ZP_03210563.1| Chromosome segregation ATPase [Lactobacillus rhamnosus HN001] gi|258508645|ref|YP_003171396.1| chromosome partition protein smc [Lactobacillus rhamnosus GG] gi|199591935|gb|EDZ00010.1| Chromosome segregation ATPase [Lactobacillus rhamnosus HN001] gi|257148572|emb|CAR87545.1| Chromosome partition protein smc [Lactobacillus rhamnosus GG] gi|259649951|dbj|BAI42113.1| chromosome segregation protein [Lactobacillus rhamnosus GG] Length = 1184 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ F+ F + +I+F LT + G NG GKS+++EAI W + + G+ Sbjct: 1 MELKRLIINGFKSFADKTEIDFVSGLTGIVGPNGSGKSNITEAIRWALGEQSAKSLRGER 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|220928146|ref|YP_002505055.1| chromosome segregation protein SMC [Clostridium cellulolyticum H10] gi|219998474|gb|ACL75075.1| chromosome segregation protein SMC [Clostridium cellulolyticum H10] Length = 1190 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++F + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MYLRKLEIQGFKSFADKISLDFNNGITAVVGPNGSGKSNISDAVRWVLGEQSAKTLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDIIFAGTEHRKPVGFA 78 >gi|291279725|ref|YP_003496560.1| chromosome segregation protein SMC [Deferribacter desulfuricans SSM1] gi|290754427|dbj|BAI80804.1| chromosome segregation protein SMC [Deferribacter desulfuricans SSM1] Length = 1122 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F + IEF D +T + G NG GKS++ +AI W+F + + GDS Sbjct: 1 MKFRKLILQGFKSFVDKTVIEFPDGITCIVGPNGSGKSNILDAIRWVFGEQSPKELRGDS 60 Query: 87 I---KKRSIKTPMP 97 + + P Sbjct: 61 MDDVIFAGSENRKP 74 >gi|222056677|ref|YP_002539039.1| chromosome segregation protein SMC [Geobacter sp. FRC-32] gi|221565966|gb|ACM21938.1| chromosome segregation protein SMC [Geobacter sp. FRC-32] Length = 1176 Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K+ ++I F+ F + ++F +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MKIKRVDIIGFKSFHDKVSLDFQQCITGIVGPNGCGKSNVVDAIRWVMGEQSAKNLRGKQ 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I ++ P+ MA Sbjct: 61 MEDIIFGGSESRKPLGMA 78 >gi|311694424|gb|ADP97297.1| chromosome segregation protein SMC [marine bacterium HP15] Length = 1164 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLSGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSARKPVGQA 78 >gi|255994064|ref|ZP_05427199.1| putative RecF/RecN/SMC N domain protein [Eubacterium saphenum ATCC 49989] gi|255993732|gb|EEU03821.1| putative RecF/RecN/SMC N domain protein [Eubacterium saphenum ATCC 49989] Length = 1187 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I F+ F + KI+F + +T + G NG GKS++S+A+ W+F + R G Sbjct: 1 MRLKSLSIKGFKSFADPVKIDFDEGITCIVGPNGSGKSNVSDALRWVFGEQSARTLRGYK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|227824341|ref|ZP_03989173.1| chromosome segregation protein SMC [Acidaminococcus sp. D21] gi|226904840|gb|EEH90758.1| chromosome segregation protein SMC [Acidaminococcus sp. D21] Length = 1186 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L E F+ F + + F + +T + G NG GKS++S+AI W+ + + G Sbjct: 1 MRLKSFEAHGFKSFADKVNVNFENGITAIVGPNGSGKSNISDAIRWVMGEQSIKYLRGTK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MEDVIFAGSSARRPLGMA 78 >gi|149374975|ref|ZP_01892748.1| chromosome segregation SMC protein [Marinobacter algicola DG893] gi|149360864|gb|EDM49315.1| chromosome segregation SMC protein [Marinobacter algicola DG893] Length = 1164 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLSGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MSDVIFNGSSARKPVGQA 78 >gi|254429632|ref|ZP_05043339.1| chromosome segregation protein SMC [Alcanivorax sp. DG881] gi|196195801|gb|EDX90760.1| chromosome segregation protein SMC [Alcanivorax sp. DG881] Length = 1165 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + F ++LT V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTTNFPENLTAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGSNARKPVAQA 78 >gi|256005340|ref|ZP_05430305.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 2360] gi|255990659|gb|EEU00776.1| chromosome segregation protein SMC [Clostridium thermocellum DSM 2360] Length = 1210 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++EF +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MHLKRLEIQGFKSFADRIQLEFNSGITAVVGPNGSGKSNISDAIRWVLGEQSAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + PM A Sbjct: 61 MEDVIFAGTEHRKPMGFA 78 >gi|226226181|ref|YP_002760287.1| exonuclease [Gemmatimonas aurantiaca T-27] gi|226089372|dbj|BAH37817.1| exonuclease [Gemmatimonas aurantiaca T-27] Length = 800 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +FR + +I+FA LT + G NG GKS++ EAI W YG + R + DS Sbjct: 1 MRLHSLHLVNFRQHAD-TRIDFALGLTGIIGPNGSGKSTILEAIAWSLYGNSAARGNKDS 59 Query: 87 IKKRSIK 93 I++ S++ Sbjct: 60 IRRLSVE 66 >gi|310828473|ref|YP_003960830.1| chromosome segregation protein SMC [Eubacterium limosum KIST612] gi|308740207|gb|ADO37867.1| chromosome segregation protein SMC [Eubacterium limosum KIST612] Length = 1192 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F E ++EF+ ++ + G NG GKS++++AI W+ + + G Sbjct: 1 MYLKKLALAGFKSFAEPVELEFSKGVSAIVGPNGSGKSNITDAIRWVLGEQSTKSLRGKK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFSGTEKKKPLNYA 78 >gi|309806874|ref|ZP_07700861.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 03V1-b] gi|308166740|gb|EFO68932.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 03V1-b] Length = 243 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|283779090|ref|YP_003369845.1| chromosome segregation protein SMC [Pirellula staleyi DSM 6068] gi|283437543|gb|ADB15985.1| chromosome segregation protein SMC [Pirellula staleyi DSM 6068] Length = 1215 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 32/61 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + + EF +T++ G NG GKS++ + I+W+ + + G + Sbjct: 2 LKALELHGFKSFADKTRFEFPAGITVIVGPNGSGKSNIVDGIKWVLGEQSAKSLRGKDMA 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|15639358|ref|NP_218807.1| chromosome segregation protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189025600|ref|YP_001933372.1| chromosome segregation protein [Treponema pallidum subsp. pallidum SS14] gi|3322648|gb|AAC65355.1| chromosome segregation protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189018175|gb|ACD70793.1| possible chromosome segregation protein [Treponema pallidum subsp. pallidum SS14] gi|291059759|gb|ADD72494.1| chromosome segregation protein SMC [Treponema pallidum subsp. pallidum str. Chicago] Length = 941 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E+ F+ F + ++EFAD +T + G NG GKS++ +AI+W+ + R D Sbjct: 1 MLFLKTLEVFGFKSFADRVRVEFADGVTALLGPNGCGKSNVVDAIKWVLGEQSSRALRAD 60 Query: 86 SI---KKRSIKTPMPMCMA 101 + ++ + +A Sbjct: 61 RMEDVIFNGTESRRSLNVA 79 >gi|149183217|ref|ZP_01861663.1| Smc [Bacillus sp. SG-1] gi|148849082|gb|EDL63286.1| Smc [Bacillus sp. SG-1] Length = 1189 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++ +AI W+ + + G Sbjct: 1 MFLKQLDVIGFKSFAERISVDFVPGVTAVVGPNGSGKSNIIDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFAGSDSRKPLNFA 78 >gi|332981632|ref|YP_004463073.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON] gi|332699310|gb|AEE96251.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON] Length = 1188 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI F+ F + I+ +T + G NG GKS++++AI W+ + + G Sbjct: 1 MYLKRIEIYGFKSFADKIDIDLLPGITAIVGPNGSGKSNIADAIRWVLGEQSPKVLRGSR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + P+ MA Sbjct: 61 MEDIIFSGADSRKPVGMA 78 >gi|116618658|ref|YP_819029.1| condensin subunit Smc [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097505|gb|ABJ62656.1| condensin subunit Smc [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 1185 Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IE +T + G NG GKS++ EAI+W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTMIELMPGMTGIIGPNGSGKSNIIEAIQWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|227432060|ref|ZP_03914074.1| SMC structural maintenance of chromosomes partitioning protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352177|gb|EEJ42389.1| SMC structural maintenance of chromosomes partitioning protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 1185 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EIS F+ F + IE +T + G NG GKS++ EAI+W+ + + G Sbjct: 1 MKLKSLEISGFKSFADKTMIELMPGMTGIIGPNGSGKSNIIEAIQWVMGEQSAKDLRGTK 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|309808647|ref|ZP_07702539.1| chromosome partition protein smc family protein [Lactobacillus iners LactinV 01V1-a] gi|308168121|gb|EFO70247.1| chromosome partition protein smc family protein [Lactobacillus iners LactinV 01V1-a] Length = 338 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|160880575|ref|YP_001559543.1| chromosome segregation protein SMC [Clostridium phytofermentans ISDg] gi|160429241|gb|ABX42804.1| chromosome segregation protein SMC [Clostridium phytofermentans ISDg] Length = 1185 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F +F + +T + G NG GKS++++A+ W+ + + G + Sbjct: 1 MYLKSIEVHGFKSFANKITFQFKNGITGIVGPNGSGKSNVADAVRWVLGEQSAKSLRGAN 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|167771630|ref|ZP_02443683.1| hypothetical protein ANACOL_03002 [Anaerotruncus colihominis DSM 17241] gi|167666270|gb|EDS10400.1| hypothetical protein ANACOL_03002 [Anaerotruncus colihominis DSM 17241] Length = 1192 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + ++ F D +T V G NG GKS++++A+ W+ + + G Sbjct: 4 LRLRGLEIQGFKSFPDKTRLTFHDGITAVVGPNGSGKSNIADAVRWVLGEQSTKTLRGGK 63 Query: 87 IKK 89 ++ Sbjct: 64 MED 66 >gi|164688566|ref|ZP_02212594.1| hypothetical protein CLOBAR_02211 [Clostridium bartlettii DSM 16795] gi|164602979|gb|EDQ96444.1| hypothetical protein CLOBAR_02211 [Clostridium bartlettii DSM 16795] Length = 1110 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I L +E+ F+ F +I F + +T + G NG GKS++S+A+ W+ + + GD Sbjct: 6 IVHLKRLELKGFKSFPTKTEINFNEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGD 65 Query: 86 ---SIKKRSIKTPMPMC 99 + PM Sbjct: 66 KLEDVIFAGTIDKKPMN 82 >gi|167745646|ref|ZP_02417773.1| hypothetical protein ANACAC_00338 [Anaerostipes caccae DSM 14662] gi|167654958|gb|EDR99087.1| hypothetical protein ANACAC_00338 [Anaerostipes caccae DSM 14662] Length = 1186 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE++ F+ F +F +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKSIEVNGFKSFANKMIFKFDSGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + PM A Sbjct: 61 MEDVIFSGTEMRKPMGSA 78 >gi|71894005|ref|YP_279451.1| putative ABC transporter ATP-binding protein P115-like [Mycoplasma hyopneumoniae J] gi|71852132|gb|AAZ44740.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma hyopneumoniae J] Length = 979 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 1 MKLIKIEIEGFKSFAEPVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQN 60 Query: 85 -DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 61 MDDVIFAGSKTVMPVNKAMVKLTF 84 >gi|258592175|emb|CBE68484.1| putative Chromosome partition protein smc [NC10 bacterium 'Dutch sediment'] Length = 1199 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + F+ F E ++ F +T + G NG GKS+LS+AI W + + GD Sbjct: 1 MRLLRLTAFGFKSFAEKVEVTFEPGVTAIVGPNGCGKSNLSDAIRWALGEQSAKLLRGDR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MDDLIFAGNSVRKPLGMA 78 >gi|55823212|ref|YP_141653.1| chromosome segregation SMC protein [Streptococcus thermophilus CNRZ1066] gi|55739197|gb|AAV62838.1| chromosome segregation SMC protein [Streptococcus thermophilus CNRZ1066] Length = 1177 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|55821299|ref|YP_139741.1| chromosome segregation SMC protein [Streptococcus thermophilus LMG 18311] gi|55737284|gb|AAV60926.1| chromosome segregation SMC protein [Streptococcus thermophilus LMG 18311] Length = 1177 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|116628031|ref|YP_820650.1| chromosome segregation SMC protein [Streptococcus thermophilus LMD-9] gi|116101308|gb|ABJ66454.1| condensin subunit Smc [Streptococcus thermophilus LMD-9] gi|312278627|gb|ADQ63284.1| Condensin subunit Smc [Streptococcus thermophilus ND03] Length = 1177 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|72080984|ref|YP_288042.1| ABC transporter ATP-binding protein P115-like [Mycoplasma hyopneumoniae 7448] gi|71914108|gb|AAZ54019.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma hyopneumoniae 7448] Length = 979 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 1 MKLIKIEIEGFKSFAEPVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQN 60 Query: 85 -DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 61 MDDVIFAGSKTVMPVNKAMVKLTF 84 >gi|193216951|ref|YP_002000193.1| chromosome segregation ATPase Smc [Mycoplasma arthritidis 158L3-1] gi|193002274|gb|ACF07489.1| chromosome segregation ATPase Smc [Mycoplasma arthritidis 158L3-1] Length = 978 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F + + F + + G NG GKS++++AI W+ + + GD+ Sbjct: 1 MKLIKVEAHGFKSFADKVTLMFDGGVVAIIGPNGSGKSNINDAIRWVLGETSSKALRGDN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT M A Sbjct: 61 MEDVIFSGSKTEKEMNRA 78 >gi|182415724|ref|YP_001820790.1| chromosome segregation protein SMC [Opitutus terrae PB90-1] gi|177842938|gb|ACB77190.1| chromosome segregation protein SMC [Opitutus terrae PB90-1] Length = 1301 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 8/91 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ F+ F + + F +T V G NG GKS+++++I W+ + + G Sbjct: 1 MYLKALKLHGFKSFADPTMLRFEPGVTAVVGPNGCGKSNIADSIRWVLGEQSAKALRGGK 60 Query: 87 IK---KRSIKTPMPMCMA-----VPRCKYQL 109 ++ T P M + C+ QL Sbjct: 61 MQDVIFEGADTRKPAQMCEVSLLLTECEKQL 91 >gi|317495798|ref|ZP_07954161.1| chromosome segregation protein SMC [Gemella moribillum M424] gi|316913975|gb|EFV35458.1| chromosome segregation protein SMC [Gemella moribillum M424] Length = 1184 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E++ F+ F + EF ++L V G NG GKS++ +AI W+ + + G S Sbjct: 1 MKLVKVEVTGFKSFQKKTTFEFKNNLIGVVGPNGSGKSNIIDAIRWVLGEQSAKNLRGSS 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|120554092|ref|YP_958443.1| chromosome segregation protein SMC [Marinobacter aquaeolei VT8] gi|120323941|gb|ABM18256.1| condensin subunit Smc [Marinobacter aquaeolei VT8] Length = 1163 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++T V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVPFPSNMTAVVGPNGCGKSNIIDAVRWVMGESSAKYLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSARKPVGQA 78 >gi|317472751|ref|ZP_07932064.1| chromosome segregation protein SMC [Anaerostipes sp. 3_2_56FAA] gi|316899777|gb|EFV21778.1| chromosome segregation protein SMC [Anaerostipes sp. 3_2_56FAA] Length = 1186 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE++ F+ F +F +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKSIEVNGFKSFANKMIFKFDSGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + PM A Sbjct: 61 MEDVIFSGTEMRKPMGSA 78 >gi|327441089|dbj|BAK17454.1| chromosome segregation ATPase [Solibacillus silvestris StLB046] Length = 1193 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F E I+F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLEVVGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + ++ + A Sbjct: 61 MEDVIFAGSESRRALNFA 78 >gi|110637995|ref|YP_678202.1| chromosome segregation protein, Smc family protein [Cytophaga hutchinsonii ATCC 33406] gi|28375463|emb|CAD66595.1| SMC protein [Cytophaga hutchinsonii] gi|110280676|gb|ABG58862.1| chromosome segregation protein, Smc family protein [Cytophaga hutchinsonii ATCC 33406] Length = 1178 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ R D Sbjct: 1 MQLSKLEIKGFKSFGDKVVINFDEGITGIVGPNGCGKSNVVDAIRWVLGEQKTRALRSDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P MA Sbjct: 61 MENVIFNGTKNRKPQQMA 78 >gi|225419775|ref|ZP_03762078.1| hypothetical protein CLOSTASPAR_06113 [Clostridium asparagiforme DSM 15981] gi|225041579|gb|EEG51825.1| hypothetical protein CLOSTASPAR_06113 [Clostridium asparagiforme DSM 15981] Length = 1186 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANKLVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTELRKPQGFA 78 >gi|163751931|ref|ZP_02159144.1| SMC family protein [Shewanella benthica KT99] gi|161328214|gb|EDP99379.1| SMC family protein [Shewanella benthica KT99] Length = 1136 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDSTTIPFLSPLSAIIGPNGCGKSNIIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|304404217|ref|ZP_07385879.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus YK9] gi|304347195|gb|EFM13027.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus YK9] Length = 1196 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S++I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDSIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291459098|ref|ZP_06598488.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418352|gb|EFE92071.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 1094 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F +++F+ +T + G NG GKS++S+A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANKTELDFSRGVTGIVGPNGSGKSNISDAVRWVLGEQKIKQLRGAS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTQKRKPQSYA 78 >gi|160892685|ref|ZP_02073475.1| hypothetical protein CLOL250_00215 [Clostridium sp. L2-50] gi|156865726|gb|EDO59157.1| hypothetical protein CLOL250_00215 [Clostridium sp. L2-50] Length = 1185 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ + + G Sbjct: 1 MYLKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|58582036|ref|YP_201052.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426630|gb|AAW75667.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 1218 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%) Query: 2 TRLRKKNTCACL----SKSLTSYYAR----KLIFKLLDIEISHFRGFTEIQKIEFADHLT 53 T R + AC+ K L ++ AR + +L I++S F+ F + + ++T Sbjct: 19 TACRSYGSRACVLASQEKRLPAWSARCPESPVPMRLSTIKLSGFKSFVDPTTLHLPTNMT 78 Query: 54 IVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS---IKKRSIKTPMPMCMA 101 + G NG GKS++ +A+ W+ + R GDS + P+ A Sbjct: 79 GIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSLTDVIFSGSSARKPVSQA 129 >gi|295099735|emb|CBK88824.1| SMC proteins Flexible Hinge Domain./RecF/RecN/SMC N terminal domain. [Eubacterium cylindroides T2-87] Length = 526 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I+F + +T + G NG GKS++++AI W+ + + S Sbjct: 1 MFLKRIELQGFKSFADKTIIQFENDITGIVGPNGCGKSNVNDAIRWVLGEQSVKSLRSGS 60 Query: 87 ----IKKRSIKTPMPMCMA 101 I + P+ MA Sbjct: 61 SMADIIFSGSEYRKPVNMA 79 >gi|225019243|ref|ZP_03708435.1| hypothetical protein CLOSTMETH_03196 [Clostridium methylpentosum DSM 5476] gi|224947874|gb|EEG29083.1| hypothetical protein CLOSTMETH_03196 [Clostridium methylpentosum DSM 5476] Length = 1191 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + +EF D +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MLLKSLELQGFKSFPDKTLLEFHDGVTAVVGPNGSGKSNISDAVRWVLGEQSSKTLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|303229657|ref|ZP_07316445.1| chromosome segregation protein SMC [Veillonella atypica ACS-134-V-Col7a] gi|302515782|gb|EFL57736.1| chromosome segregation protein SMC [Veillonella atypica ACS-134-V-Col7a] Length = 1184 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +LL +E+ F+ F + ++F+ +T V G NG GKS++++A++W+ G Sbjct: 1 MQLLRLELKGFKSFADKTVVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVHNLRGQR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + PM A Sbjct: 61 AEDIIFSGTEKRKPMSAA 78 >gi|223935776|ref|ZP_03627691.1| chromosome segregation protein SMC [bacterium Ellin514] gi|223895377|gb|EEF61823.1| chromosome segregation protein SMC [bacterium Ellin514] Length = 1249 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T + G NG GKS++S+AI W+ + + G Sbjct: 1 MYLKNLTVFGFKSFANKTSLNFQPGVTAIVGPNGCGKSNVSDAIRWVLGEQSAKALRGGE 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MADVIFNGTDGRKPLGMA 78 >gi|149911744|ref|ZP_01900350.1| Chromosome segregation ATPase, sms [Moritella sp. PE36] gi|149805169|gb|EDM65189.1| Chromosome segregation ATPase, sms [Moritella sp. PE36] Length = 1160 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+IS F+ F + ++ F +T V G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MYLKKIKISGFKSFVDTTELHFPHDMTAVVGPNGCGKSNIIDAVRWVLGESSAKHLRGDS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|114047078|ref|YP_737628.1| chromosome segregation protein SMC [Shewanella sp. MR-7] gi|113888520|gb|ABI42571.1| chromosome segregation protein SMC [Shewanella sp. MR-7] Length = 1142 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|113969848|ref|YP_733641.1| chromosome segregation protein SMC [Shewanella sp. MR-4] gi|113884532|gb|ABI38584.1| chromosome segregation protein SMC [Shewanella sp. MR-4] Length = 1142 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|24374427|ref|NP_718470.1| SMC family protein [Shewanella oneidensis MR-1] gi|24348999|gb|AAN55914.1|AE015728_3 SMC family protein [Shewanella oneidensis MR-1] Length = 1145 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|117920015|ref|YP_869207.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] gi|117612347|gb|ABK47801.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] Length = 1142 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MSDVIFNGSSARKPVSVA 78 >gi|104774252|ref|YP_619232.1| chromosome partition protein SMC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423333|emb|CAI98180.1| Chromosome partition protein SMC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 1181 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK---KR 90 + F+ F + I+F +T + G NG GKS+++EAI W+ + + G ++K Sbjct: 3 LEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITEAIRWVMGEGSAKSLRGRNMKDVIFA 62 Query: 91 SIKTPMPMCMA 101 + P+ A Sbjct: 63 GSQFRKPLNRA 73 >gi|323464671|gb|ADX76824.1| chromosome segregation SMC protein [Staphylococcus pseudintermedius ED99] Length = 1190 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 35/64 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F E +I+F +T + G NG GKS++++AI+W+ + R G Sbjct: 1 MVYLKSIDAYGFKSFAEATQIQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSARSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|319892232|ref|YP_004149107.1| Chromosome partition protein smc [Staphylococcus pseudintermedius HKU10-03] gi|317161928|gb|ADV05471.1| Chromosome partition protein smc [Staphylococcus pseudintermedius HKU10-03] Length = 1190 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 35/64 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F E +I+F +T + G NG GKS++++AI+W+ + R G Sbjct: 1 MVYLKSIDAYGFKSFAEATQIQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSARSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|148652279|ref|YP_001279372.1| SMC domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571363|gb|ABQ93422.1| condensin subunit Smc [Psychrobacter sp. PRwf-1] Length = 1280 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLSGFKSFANPTTFSFRHGITAIVGPNGCGKSNVIDAIRWVLGESSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|325103652|ref|YP_004273306.1| chromosome segregation protein SMC [Pedobacter saltans DSM 12145] gi|324972500|gb|ADY51484.1| chromosome segregation protein SMC [Pedobacter saltans DSM 12145] Length = 1179 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ + R + Sbjct: 1 MQLNKLEIKGFKSFGDKITINFNEGVTAIVGPNGCGKSNVVDAIRWVLGEQSTRTLRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P +A Sbjct: 61 MENIIFNGTKARKPANLA 78 >gi|212634785|ref|YP_002311310.1| SMC family protein [Shewanella piezotolerans WP3] gi|212556269|gb|ACJ28723.1| SMC family protein [Shewanella piezotolerans WP3] Length = 1141 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPLPNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|160938005|ref|ZP_02085362.1| hypothetical protein CLOBOL_02898 [Clostridium bolteae ATCC BAA-613] gi|158438999|gb|EDP16754.1| hypothetical protein CLOBOL_02898 [Clostridium bolteae ATCC BAA-613] Length = 1186 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANKLVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGAS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|325971129|ref|YP_004247320.1| SMC domain protein [Spirochaeta sp. Buddy] gi|324026367|gb|ADY13126.1| SMC domain protein [Spirochaeta sp. Buddy] Length = 949 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +EF+D +T + G NG GKS++ +AI+W+ + + Sbjct: 1 MFLKSLEIYGFKSFADKVNLEFSDGITSLLGPNGCGKSNIVDAIKWVLGEQSTKTLRAGR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ +A Sbjct: 61 MEDVIFNGTDTRKPLQVA 78 >gi|313678608|ref|YP_004056348.1| chromosome segregation protein SMC [Mycoplasma bovis PG45] gi|312950128|gb|ADR24723.1| chromosome segregation protein SMC [Mycoplasma bovis PG45] Length = 992 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKVEAHGFKSFAEPITLRFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + KT PM AV Sbjct: 61 MDDVIFAGSKTAKPMDKAV 79 >gi|145298233|ref|YP_001141074.1| chromosome segregation protein SMC [Aeromonas salmonicida subsp. salmonicida A449] gi|142851005|gb|ABO89326.1| chromosome segregation protein SMC [Aeromonas salmonicida subsp. salmonicida A449] Length = 1124 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E +IEF+ +T V G NG GKS++ +A+ W+ + R G++ Sbjct: 1 MRLKLIKLAGFKSFVEPTRIEFSADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGEN 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|210633203|ref|ZP_03297719.1| hypothetical protein COLSTE_01632 [Collinsella stercoris DSM 13279] gi|210159208|gb|EEA90179.1| hypothetical protein COLSTE_01632 [Collinsella stercoris DSM 13279] Length = 551 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + F LT++ G NG GKS++S+AI W+ + ++ G + Sbjct: 1 MYLKSLTLKGFKSFADRAHMTFEPGLTVIVGPNGSGKSNVSDAILWVLGEQSAKQLRGQA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MEDVIFSGSSARKPVGVA 78 >gi|229815432|ref|ZP_04445764.1| hypothetical protein COLINT_02480 [Collinsella intestinalis DSM 13280] gi|229808965|gb|EEP44735.1| hypothetical protein COLINT_02480 [Collinsella intestinalis DSM 13280] Length = 1178 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + F LT++ G NG GKS++S+AI W+ + ++ G + Sbjct: 1 MYLKSLTLKGFKSFADRAHMTFEPGLTVIVGPNGSGKSNVSDAILWVLGEQSAKQLRGQA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MEDVIFSGSSARKPVGVA 78 >gi|225164963|ref|ZP_03727174.1| chromosome segregation protein SMC [Opitutaceae bacterium TAV2] gi|224800421|gb|EEG18806.1| chromosome segregation protein SMC [Opitutaceae bacterium TAV2] Length = 777 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ F+ F + + F +T + G NG GKS++++AI W+ + + G Sbjct: 1 MHLKALKLHGFKSFADQSTLRFEPGVTAIVGPNGCGKSNVADAIRWVLGEQSAKALRGGK 60 Query: 87 IK---KRSIKTPMPMCM 100 ++ T P M Sbjct: 61 MQDVIFEGADTRKPAQM 77 >gi|297621843|ref|YP_003709980.1| putative chromosome segregation SMC protein [Waddlia chondrophila WSU 86-1044] gi|297377144|gb|ADI38974.1| putative chromosome segregation SMC protein [Waddlia chondrophila WSU 86-1044] Length = 1239 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R+ L I+I F+ F + +EF +T + G NG GKS++S++ W+ + + Sbjct: 4 RRSFLFLKKIKILGFKSFADSTVLEFHPGITAIVGPNGCGKSNISDSFRWVLGEQSAKSM 63 Query: 83 HGDSI---KKRSIKTPMPMCMA 101 G + P+ ++ Sbjct: 64 RGSKMNDVIFAGTAKRKPLNLS 85 >gi|224541341|ref|ZP_03681880.1| hypothetical protein CATMIT_00501 [Catenibacterium mitsuokai DSM 15897] gi|224525778|gb|EEF94883.1| hypothetical protein CATMIT_00501 [Catenibacterium mitsuokai DSM 15897] Length = 978 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + +EF +T + G NG GKS++++AI W+ + + G++ Sbjct: 1 MYLKRIELHGFKSFADKSVVEFMPGITGIVGPNGCGKSNITDAIRWVLGEKSAKAMRGET 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|225180935|ref|ZP_03734383.1| chromosome segregation protein SMC [Dethiobacter alkaliphilus AHT 1] gi|225168416|gb|EEG77219.1| chromosome segregation protein SMC [Dethiobacter alkaliphilus AHT 1] Length = 1193 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ F + + +T+V G NG GKS++++A+ W+ + R G Sbjct: 1 MFVKRLEMHGFKSFGDKTIFDLTPGITVVVGPNGCGKSNITDAVRWVLGEQSARHLRGTR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D I P+ A Sbjct: 61 MDDIIFGGTANRKPLSFA 78 >gi|326800666|ref|YP_004318485.1| chromosome segregation protein SMC [Sphingobacterium sp. 21] gi|326551430|gb|ADZ79815.1| chromosome segregation protein SMC [Sphingobacterium sp. 21] Length = 1181 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F + +T + G NG GKS++ +AI W+ + + Sbjct: 1 MQLTRLEIKGFKSFGDKITINFNEGVTAIVGPNGCGKSNVVDAIRWVLGEQRTKNLRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT +A Sbjct: 61 MENIIFNGTKTRKAANLA 78 >gi|226945099|ref|YP_002800172.1| chromosome segregation protein SMC [Azotobacter vinelandii DJ] gi|226720026|gb|ACO79197.1| chromosome segregation protein SMC [Azotobacter vinelandii DJ] Length = 1162 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSNSRKPVTQA 78 >gi|163814045|ref|ZP_02205437.1| hypothetical protein COPEUT_00198 [Coprococcus eutactus ATCC 27759] gi|158450494|gb|EDP27489.1| hypothetical protein COPEUT_00198 [Coprococcus eutactus ATCC 27759] Length = 1185 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ + + G Sbjct: 1 MYLKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|153931580|ref|YP_001385102.1| RecF/RecN/SMC domain-containing protein [Clostridium botulinum A str. ATCC 19397] gi|153937474|ref|YP_001388571.1| RecF/RecN/SMC domain-containing protein [Clostridium botulinum A str. Hall] gi|152927624|gb|ABS33124.1| RecF/RecN/SMC domain protein [Clostridium botulinum A str. ATCC 19397] gi|152933388|gb|ABS38887.1| RecF/RecN/SMC domain protein [Clostridium botulinum A str. Hall] Length = 837 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 7/78 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F + ++ I++FRG+ +K F D ++ +++G NGYGK++L ++IEW G T + Sbjct: 4 FYIKNVLINNFRGYNAEKKYRFEDDNGNPSNIVLLSGPNGYGKTTLMDSIEWCLTG-TIK 62 Query: 81 RKHGDSIKKRSIKTPMPM 98 R + D +K+ S KT + Sbjct: 63 RVYDDYMKRCSQKTEREL 80 >gi|54020293|ref|YP_116186.1| p115 protein [Mycoplasma hyopneumoniae 232] gi|53987466|gb|AAV27667.1| p115 protein [Mycoplasma hyopneumoniae 232] Length = 979 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL+ IEI F+ F E I+F + + G NG GKS++++AI+W+ + ++ G Sbjct: 1 MKLIKIEIEGFKSFAESVSIKFDGSIVGIIGPNGSGKSNINDAIKWVLGEKSVKQLRGQN 60 Query: 85 -DSIKKRSIKTPMPMCMAVPRCKY 107 D + KT MP+ A+ + + Sbjct: 61 MDDVIFAGSKTVMPVNKAMVKLTF 84 >gi|262369275|ref|ZP_06062603.1| chromosome segregation ATPase [Acinetobacter johnsonii SH046] gi|262315343|gb|EEY96382.1| chromosome segregation ATPase [Acinetobacter johnsonii SH046] Length = 1150 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F D+ T V G NG GKS++ +AI W+ + R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLHFKDNRTAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTAKRKPVSVA 78 >gi|83647419|ref|YP_435854.1| chromosome segregation protein SMC [Hahella chejuensis KCTC 2396] gi|83635462|gb|ABC31429.1| chromosome segregation protein SMC [Hahella chejuensis KCTC 2396] Length = 1162 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVHFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 MTDVIFNGSNTRKPVGQA 78 >gi|83589803|ref|YP_429812.1| condensin subunit Smc [Moorella thermoacetica ATCC 39073] gi|83572717|gb|ABC19269.1| condensin subunit Smc [Moorella thermoacetica ATCC 39073] Length = 1187 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI F+ F + ++E +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MFLKGIEIQGFKTFVDRVRLELGPGVTGIVGPNGSGKSNIVDAILWVLGEQSAKSLRGTR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ MA Sbjct: 61 MDDVIFAGSARRRPVGMA 78 >gi|323484229|ref|ZP_08089598.1| hypothetical protein HMPREF9474_01349 [Clostridium symbiosum WAL-14163] gi|323402471|gb|EGA94800.1| hypothetical protein HMPREF9474_01349 [Clostridium symbiosum WAL-14163] Length = 641 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANRILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|89098684|ref|ZP_01171566.1| Smc [Bacillus sp. NRRL B-14911] gi|89086646|gb|EAR65765.1| Smc [Bacillus sp. NRRL B-14911] Length = 1188 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I+ F+ F E ++F +T V G NG GKS+++++I W+ + + G Sbjct: 1 MFLKRLDIAGFKSFAEKSSVDFVPGVTAVVGPNGSGKSNITDSIRWVLGEQSAKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MEDIIFAGSDSRKSLNFA 78 >gi|329896665|ref|ZP_08271658.1| Chromosome partition protein smc [gamma proteobacterium IMCC3088] gi|328921601|gb|EGG28977.1| Chromosome partition protein smc [gamma proteobacterium IMCC3088] Length = 930 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + ++F +++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVQFPHNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|226322325|ref|ZP_03797843.1| hypothetical protein COPCOM_00086 [Coprococcus comes ATCC 27758] gi|225209247|gb|EEG91601.1| hypothetical protein COPCOM_00086 [Coprococcus comes ATCC 27758] Length = 476 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEVQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQKVKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFSGTENRKPLSYA 78 >gi|322516542|ref|ZP_08069458.1| SMC family domain protein [Streptococcus vestibularis ATCC 49124] gi|322124930|gb|EFX96350.1| SMC family domain protein [Streptococcus vestibularis ATCC 49124] Length = 1177 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|322373155|ref|ZP_08047691.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] gi|321278197|gb|EFX55266.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] Length = 1177 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|312863793|ref|ZP_07724031.1| RecF/RecN/SMC N-terminal domain protein [Streptococcus vestibularis F0396] gi|311101329|gb|EFQ59534.1| RecF/RecN/SMC N-terminal domain protein [Streptococcus vestibularis F0396] Length = 527 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|304440216|ref|ZP_07400106.1| possible chromosome segregation protein Smc [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371265|gb|EFM24881.1| possible chromosome segregation protein Smc [Peptoniphilus duerdenii ATCC BAA-1640] Length = 1182 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + KIEF + +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MYLKSLTMQGFKSFADKTKIEFDNEITGVVGPNGSGKSNISDAIMWVLGETSIKSLRGKK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MEDVIFSGTNKRKPLGFA 78 >gi|228477669|ref|ZP_04062298.1| chromosome segregation protein SMC [Streptococcus salivarius SK126] gi|228250558|gb|EEK09769.1| chromosome segregation protein SMC [Streptococcus salivarius SK126] Length = 1177 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + ++ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MPDVIFAGTEVRKALNYA 78 >gi|239624035|ref|ZP_04667066.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522066|gb|EEQ61932.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1186 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANKLLFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGAS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|228475081|ref|ZP_04059809.1| chromosome segregation protein SMC [Staphylococcus hominis SK119] gi|228271066|gb|EEK12454.1| chromosome segregation protein SMC [Staphylococcus hominis SK119] Length = 1189 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDTIGFKSFADRTNVQFDRGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|148377701|ref|YP_001256577.1| ABC transporter ATP-binding protein [Mycoplasma agalactiae PG2] gi|148291747|emb|CAL59136.1| P115 Like (Mycoplasma hyorhinis) ABCtransporter ATP Binding Protein [Mycoplasma agalactiae PG2] Length = 995 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKVEAHGFKSFAEPITLHFNGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + KT PM AV Sbjct: 61 MDDVIFAGSKTAKPMDKAV 79 >gi|77919950|ref|YP_357765.1| chromosome segregation SMC protein [Pelobacter carbinolicus DSM 2380] gi|77546033|gb|ABA89595.1| condensin subunit Smc [Pelobacter carbinolicus DSM 2380] Length = 1173 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ IEI F+ F + ++F + V G NG GKS++ +AI W + + G + Sbjct: 1 MQIKRIEIVGFKSFVDRVALDFGPGIAAVVGPNGCGKSNVVDAIRWAMGEQSPKNLRGRA 60 Query: 87 IKKR---SIKTPMPMCMA 101 ++ + P+ MA Sbjct: 61 MEDVIFGGSEKRKPVGMA 78 >gi|309805556|ref|ZP_07699601.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165207|gb|EFO67445.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus iners LactinV 09V1-c] Length = 296 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ F+ F + I F +T + G NG GKS+++EAI W+ + + G++ Sbjct: 1 MPLKQLVLNGFKSFADKTTINFNKGITGIVGPNGSGKSNVTEAIRWVMGENSAKALRGEN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MRDIIFAGSEFRGPLNKA 78 >gi|295091754|emb|CBK77861.1| condensin subunit Smc [Clostridium cf. saccharolyticum K10] Length = 1195 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEIQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTEIRKPQGFA 78 >gi|291320364|ref|YP_003515627.1| p115-like ABC transporter ATP-Binding protein [Mycoplasma agalactiae] gi|290752698|emb|CBH40672.1| P115 Like (Mycoplasma hyorhinis) ABCtransporter ATP Binding Protein [Mycoplasma agalactiae] Length = 995 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F E + F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKVEAHGFKSFAEPITLHFNGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + KT PM AV Sbjct: 61 MDDVIFAGSKTAKPMDKAV 79 >gi|312888760|ref|ZP_07748324.1| chromosome segregation protein SMC [Mucilaginibacter paludis DSM 18603] gi|311298760|gb|EFQ75865.1| chromosome segregation protein SMC [Mucilaginibacter paludis DSM 18603] Length = 1180 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E+ F+ F + I F + +T + G NG GKS++ ++I W+ + R + Sbjct: 1 MQLTRLEVKGFKSFGDKITINFNEGITAIVGPNGCGKSNVVDSIRWVLGEQSTRMLRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K+ P +A Sbjct: 61 MENVIFNGSKSRKPGNLA 78 >gi|291563452|emb|CBL42268.1| condensin subunit Smc [butyrate-producing bacterium SS3/4] Length = 1185 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F EF + +T + G NG GKS++++A+ W+ ++ S Sbjct: 1 MYLKSIEVQGFKSFANKIIFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQKVKQLRSSS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTEMRKPQGFA 78 >gi|283798075|ref|ZP_06347228.1| SMC family protein [Clostridium sp. M62/1] gi|291074217|gb|EFE11581.1| SMC family protein [Clostridium sp. M62/1] Length = 1195 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G + Sbjct: 1 MYLKSIEIQGFKSFANKILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGGT 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTEIRKPQGFA 78 >gi|1237015|dbj|BAA10977.1| ORF4 [Bacillus subtilis] Length = 1188 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ G + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGGQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|315648180|ref|ZP_07901281.1| chromosome segregation protein SMC [Paenibacillus vortex V453] gi|315276826|gb|EFU40169.1| chromosome segregation protein SMC [Paenibacillus vortex V453] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|310641510|ref|YP_003946268.1| chromosome segregation protein smc [Paenibacillus polymyxa SC2] gi|309246460|gb|ADO56027.1| Chromosome segregation protein SMC [Paenibacillus polymyxa SC2] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|308068622|ref|YP_003870227.1| Chromosome partition protein smc [Paenibacillus polymyxa E681] gi|305857901|gb|ADM69689.1| Chromosome partition protein smc [Paenibacillus polymyxa E681] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|299144131|ref|ZP_07037211.1| putative SMC family, C- domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518616|gb|EFI42355.1| putative SMC family, C- domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 1182 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + KIEF + +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MYLKTLYIQGFKSFAQKTKIEFNNKITGIVGPNGSGKSNISDAMMWVLGETSIKSLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MEDVIFSGTDEKKPLGFA 78 >gi|253573488|ref|ZP_04850831.1| chromosome segregation protein SMC [Paenibacillus sp. oral taxon 786 str. D14] gi|251847016|gb|EES75021.1| chromosome segregation protein SMC [Paenibacillus sp. oral taxon 786 str. D14] Length = 1190 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294055882|ref|YP_003549540.1| chromosome segregation protein SMC [Coraliomargarita akajimensis DSM 45221] gi|293615215|gb|ADE55370.1| chromosome segregation protein SMC [Coraliomargarita akajimensis DSM 45221] Length = 1241 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I IS F+ F + +++ +T V G NG GKS++ +AI W+ + + G S Sbjct: 1 MYLKEIVISGFKSFADRTRLDLRRGVTAVVGPNGCGKSNIVDAIRWVLGEQSAKALRGAS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|229829000|ref|ZP_04455069.1| hypothetical protein GCWU000342_01085 [Shuttleworthia satelles DSM 14600] gi|229792163|gb|EEP28277.1| hypothetical protein GCWU000342_01085 [Shuttleworthia satelles DSM 14600] Length = 1186 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F ++F +T + G NG GKS++S+A+ W+ + R+ G S Sbjct: 1 MYLKSIEIHGFKSFANKIVLDFHKGITAIVGPNGSGKSNVSDAVRWVLGEQSARQLRGAS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|314936604|ref|ZP_07843951.1| SMC family, C- domain protein [Staphylococcus hominis subsp. hominis C80] gi|313655223|gb|EFS18968.1| SMC family, C- domain protein [Staphylococcus hominis subsp. hominis C80] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDTIGFKSFADRTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|157374874|ref|YP_001473474.1| chromosome segregation protein SMC [Shewanella sediminis HAW-EB3] gi|157317248|gb|ABV36346.1| chromosome segregation protein SMC [Shewanella sediminis HAW-EB3] Length = 299 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDSTKIPFLNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSSARRPVSVA 78 >gi|110833808|ref|YP_692667.1| chromosome segregation SMC protein [Alcanivorax borkumensis SK2] gi|110646919|emb|CAL16395.1| chromosome segregation SMC protein [Alcanivorax borkumensis SK2] Length = 1166 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + F ++LT V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTTYFPENLTAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGSNARKPVAQA 78 >gi|332977618|gb|EGK14386.1| SMC domain protein [Psychrobacter sp. 1501(2011)] Length = 1301 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHGITAIVGPNGCGKSNVIDAIRWVLGESSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|308271408|emb|CBX28016.1| hypothetical protein N47_G33400 [uncultured Desulfobacterium sp.] Length = 1061 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L KL +EIS F+ F + IEF + + G NG GKS++ +A++W+ + ++ G Sbjct: 5 LYMKLKSLEISGFKSFNDKANIEFPAGVCAIVGPNGCGKSNIVDALKWVMGEQSVKQLRG 64 Query: 85 DSI---KKRSIKTPMPMCMA 101 S+ + MA Sbjct: 65 KSMEDVIFAGANGKPQLNMA 84 >gi|167463676|ref|ZP_02328765.1| chromosome segregation SMC protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382557|ref|ZP_08056437.1| chromosome condensation and segregation SMC ATPase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153473|gb|EFX45878.1| chromosome condensation and segregation SMC ATPase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 1192 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+S F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELSGFKSFADKTELEFVQGITAVVGPNGSGKSNISDGIRWVLGETSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|329929594|ref|ZP_08283301.1| chromosome segregation protein SMC [Paenibacillus sp. HGF5] gi|328936239|gb|EGG32691.1| chromosome segregation protein SMC [Paenibacillus sp. HGF5] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|261408032|ref|YP_003244273.1| chromosome segregation protein SMC [Paenibacillus sp. Y412MC10] gi|261284495|gb|ACX66466.1| chromosome segregation protein SMC [Paenibacillus sp. Y412MC10] Length = 1189 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|326204788|ref|ZP_08194642.1| chromosome segregation protein SMC [Clostridium papyrosolvens DSM 2782] gi|325985000|gb|EGD45842.1| chromosome segregation protein SMC [Clostridium papyrosolvens DSM 2782] Length = 1190 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++F +T V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLRKLEIQGFKSFADKISLDFHSGITAVVGPNGSGKSNIGDAVRWVLGEQSAKTLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFAGTEHRKPVGFA 78 >gi|323692111|ref|ZP_08106357.1| chromosome segregation protein SMC [Clostridium symbiosum WAL-14673] gi|323503834|gb|EGB19650.1| chromosome segregation protein SMC [Clostridium symbiosum WAL-14673] Length = 1186 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ G S Sbjct: 1 MYLKSIEIQGFKSFANRILFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|71064894|ref|YP_263621.1| condensin subunit Smc [Psychrobacter arcticus 273-4] gi|71037879|gb|AAZ18187.1| condensin subunit Smc [Psychrobacter arcticus 273-4] Length = 1307 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHGITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|93005180|ref|YP_579617.1| SMC protein-like [Psychrobacter cryohalolentis K5] gi|92392858|gb|ABE74133.1| SMC protein-like [Psychrobacter cryohalolentis K5] Length = 1318 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHGITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|188585991|ref|YP_001917536.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350678|gb|ACB84948.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] Length = 1191 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L +E+ F+ F E E +D +T V G NG GKS++S+AI W+ + + G+ + Sbjct: 2 LKKLELVGFKSFPEKTTFELSDGITAVVGPNGCGKSNISDAIRWVLGEHRTKPLRGEKME 61 Query: 88 --KKRSIKTPMPMCMA 101 + M MA Sbjct: 62 DFIFSGTQNKKAMNMA 77 >gi|222151067|ref|YP_002560221.1| hypothetical protein MCCL_0818 [Macrococcus caseolyticus JCSC5402] gi|222120190|dbj|BAH17525.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 1192 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 35/64 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E + F+ F + + F + +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MIYLQSVEATGFKSFADKTTVLFDEGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|254442049|ref|ZP_05055525.1| chromosome segregation protein SMC [Verrucomicrobiae bacterium DG1235] gi|198256357|gb|EDY80665.1| chromosome segregation protein SMC [Verrucomicrobiae bacterium DG1235] Length = 1293 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + ++F +T V G NG GKS+++++I W+ + + G Sbjct: 1 MYLSALKVNGFKSFADPTLLKFNRGVTAVVGPNGCGKSNIADSIRWVLGEQSAKALRGGK 60 Query: 87 IK---KRSIKTPMPMCM 100 ++ P+ + Sbjct: 61 MQDVIFEGTDKRKPLNI 77 >gi|256822389|ref|YP_003146352.1| chromosome segregation protein SMC [Kangiella koreensis DSM 16069] gi|256795928|gb|ACV26584.1| chromosome segregation protein SMC [Kangiella koreensis DSM 16069] Length = 1165 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + +LT + G NG GKS+L +A+ W+ + + GD+ Sbjct: 1 MRLKQIKLAGFKSFVDPTTVSLPSNLTAIVGPNGCGKSNLIDAVRWVMGESSAKNLRGDA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|42527004|ref|NP_972102.1| chromosome partition protein SmC, putative [Treponema denticola ATCC 35405] gi|41817428|gb|AAS12013.1| chromosome partition protein SmC, putative [Treponema denticola ATCC 35405] Length = 980 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++EI F+ F + KIEFAD +T + G NG GKS++ +A++W+ + R D Sbjct: 1 MFLKNLEIFGFKSFPDRVKIEFADGITALLGPNGCGKSNVVDAVKWVLGEQSSRTLRADK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + +A Sbjct: 61 MEDVIFNGTEKRNQLNIA 78 >gi|293400483|ref|ZP_06644628.1| hypothetical protein HMPREF0863_00767 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305509|gb|EFE46753.1| hypothetical protein HMPREF0863_00767 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 980 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I F + + G NG GKS++++AI W+ + + G S Sbjct: 5 MFLKRIELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGTS 64 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 65 MSDVIFNGSTERKPVNMA 82 >gi|258511330|ref|YP_003184764.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478056|gb|ACV58375.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1190 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I F+ F + +I + +T + G NG GKS++++A+ W+ + R G Sbjct: 1 MYLKQIDILGFKSFADKTQIVLSPGITAIVGPNGSGKSNIADALRWVLGEQSVRNLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|218291548|ref|ZP_03495422.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius LAA1] gi|218238643|gb|EED05868.1| chromosome segregation protein SMC [Alicyclobacillus acidocaldarius LAA1] Length = 1190 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I F+ F + +I + +T + G NG GKS++++A+ W+ + R G Sbjct: 1 MYLKQIDILGFKSFADKTQIVLSPGITAIVGPNGSGKSNIADALRWVLGEQSVRNLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291544314|emb|CBL17423.1| chromosome segregation protein SMC, common bacterial type [Ruminococcus sp. 18P13] Length = 1188 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + K+ F LT V G NG GKS++ +A+ W+ + + G+ Sbjct: 1 MYLKSLELQGFKSFPDKIKLSFDKGLTAVVGPNGSGKSNIGDAVRWVLGEQSTKTLRGNK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFSGTEARKPVGFA 78 >gi|160947507|ref|ZP_02094674.1| hypothetical protein PEPMIC_01441 [Parvimonas micra ATCC 33270] gi|158446641|gb|EDP23636.1| hypothetical protein PEPMIC_01441 [Parvimonas micra ATCC 33270] Length = 1178 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 37/63 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI+ F+ F + K++F ++T + G NG GKS++++A+ W+ + + G Sbjct: 1 MRLKSIEINGFKSFADKIKLDFETNITAIIGPNGSGKSNVADAVRWVLGEQSAKTLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|46447121|ref|YP_008486.1| putative chromosome segregation SMC protein [Candidatus Protochlamydia amoebophila UWE25] gi|46400762|emb|CAF24211.1| putative chromosome segregation SMC protein [Candidatus Protochlamydia amoebophila UWE25] Length = 1179 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + F+ F + + F +T + G NG GKS++++A W+ + + G Sbjct: 1 MRLKKLMAVGFKSFADKTVLNFDRGITCIVGPNGCGKSNIADAFRWVLGEQSAKSMRGHK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MPDIIFAGTNHRRPLNFA 78 >gi|325474066|gb|EGC77254.1| chromosome partition protein SmC [Treponema denticola F0402] Length = 980 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + KIEFAD +T + G NG GKS++ +A++W+ + R D Sbjct: 1 MFLKSLEIFGFKSFPDRVKIEFADGITALLGPNGCGKSNVVDAVKWVLGEQSSRTLRADK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + +A Sbjct: 61 MEDVIFNGTEKRNQLNIA 78 >gi|251797475|ref|YP_003012206.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2] gi|247545101|gb|ACT02120.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2] Length = 1195 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+S F+ F + ++EF +T V G NG GKS++S+ I W+ + + G Sbjct: 1 MFLKRIELSGFKSFADKTEMEFVTGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|325922525|ref|ZP_08184286.1| condensin subunit Smc [Xanthomonas gardneri ATCC 19865] gi|325546990|gb|EGD18083.1| condensin subunit Smc [Xanthomonas gardneri ATCC 19865] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|325928159|ref|ZP_08189368.1| condensin subunit Smc [Xanthomonas perforans 91-118] gi|325541455|gb|EGD12988.1| condensin subunit Smc [Xanthomonas perforans 91-118] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|325915471|ref|ZP_08177785.1| condensin subunit Smc [Xanthomonas vesicatoria ATCC 35937] gi|325538353|gb|EGD10035.1| condensin subunit Smc [Xanthomonas vesicatoria ATCC 35937] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|302343404|ref|YP_003807933.1| chromosome segregation protein SMC [Desulfarculus baarsii DSM 2075] gi|301640017|gb|ADK85339.1| chromosome segregation protein SMC [Desulfarculus baarsii DSM 2075] Length = 1188 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EIS F+ F + ++F D L V G NG GKS++ +AI W+ + R+ G + Sbjct: 1 MKVKRLEISGFKSFAQRAVLDFPDGLCAVVGPNGCGKSNVVDAIRWVLGEQSARQLRGQA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P +A Sbjct: 61 MEDVIFNGAQSHKPTGLA 78 >gi|294665958|ref|ZP_06731222.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604261|gb|EFF47648.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|294626366|ref|ZP_06704968.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599367|gb|EFF43502.1| Chromosome segregation protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|289669575|ref|ZP_06490650.1| chromosome segregation protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|289663139|ref|ZP_06484720.1| chromosome segregation protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|285018507|ref|YP_003376218.1| chromosome segregation protein smc [Xanthomonas albilineans GPE PC73] gi|283473725|emb|CBA16228.1| putative chromosome segregation protein smc [Xanthomonas albilineans] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|188576351|ref|YP_001913280.1| chromosome segregation protein SMC [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520803|gb|ACD58748.1| chromosome segregation protein SMC [Xanthomonas oryzae pv. oryzae PXO99A] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|188992088|ref|YP_001904098.1| Chromosome segregation protein [Xanthomonas campestris pv. campestris str. B100] gi|167733848|emb|CAP52054.1| Chromosome segregation protein [Xanthomonas campestris pv. campestris] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|166711575|ref|ZP_02242782.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|116623517|ref|YP_825673.1| condensin subunit Smc [Candidatus Solibacter usitatus Ellin6076] gi|116226679|gb|ABJ85388.1| condensin subunit Smc [Candidatus Solibacter usitatus Ellin6076] Length = 1210 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL +E+ F+ F + ++ F + + + G NG GKS++S+AI W+ + + G Sbjct: 1 MLKLKRVELQGFKSFCDRTELRFNGEGIAAIVGPNGCGKSNISDAISWVLGEQSAKSLRG 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + + P+ MA Sbjct: 61 ARMEDVIFAGTRDRKPLGMA 80 >gi|21231021|ref|NP_636938.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768974|ref|YP_243736.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. 8004] gi|21112645|gb|AAM40862.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574306|gb|AAY49716.1| chromosome segregation protein [Xanthomonas campestris pv. campestris str. 8004] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|21242373|ref|NP_641955.1| chromosome segregation protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107810|gb|AAM36491.1| chromosome segregation protein [Xanthomonas axonopodis pv. citri str. 306] Length = 1211 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 45 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 104 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 105 LTDVIFSGSSARKPVSQA 122 >gi|84623948|ref|YP_451320.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367888|dbj|BAE69046.1| chromosome segregation protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|78047220|ref|YP_363395.1| chromosome segregation protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035650|emb|CAJ23341.1| Chromosome segregation protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1167 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|196232677|ref|ZP_03131528.1| chromosome segregation protein SMC [Chthoniobacter flavus Ellin428] gi|196223137|gb|EDY17656.1| chromosome segregation protein SMC [Chthoniobacter flavus Ellin428] Length = 1280 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 8/91 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F K+EF +T V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLQSLELFGFKSFAPKTKLEFHRGVTAVVGPNGCGKSNVLDAMRWVLGEQSAKALRGGE 60 Query: 87 I---KKRSIKTP-----MPMCMAVPRCKYQL 109 + + + M C+ QL Sbjct: 61 MADVIFSGTDSRAAVGMAEVSMTFAECEEQL 91 >gi|302386300|ref|YP_003822122.1| chromosome segregation protein SMC [Clostridium saccharolyticum WM1] gi|302196928|gb|ADL04499.1| chromosome segregation protein SMC [Clostridium saccharolyticum WM1] Length = 1186 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F EF + +T + G NG GKS++++A+ W+ ++ + Sbjct: 1 MYLKSIEIQGFKSFANKIVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQKVKQLRSSN 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P A Sbjct: 61 MQDVIFSGTELRKPQGFA 78 >gi|283457879|ref|YP_003362479.1| chromosome segregation ATPase [Rothia mucilaginosa DY-18] gi|283133894|dbj|BAI64659.1| chromosome segregation ATPase [Rothia mucilaginosa DY-18] Length = 1120 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 TS A + + L+ + + F+ F EF + V G NG GKS++ +A+ W+ Sbjct: 10 TSSSAERPLVHLMSLTLRGFKSFASATTFEFTPGINAVVGPNGSGKSNVLDALAWVMGEQ 69 Query: 78 TQRRKHGDSIKK 89 + G S+K Sbjct: 70 GAKSLRGGSMKD 81 >gi|225870876|ref|YP_002746823.1| chromosome partition protein [Streptococcus equi subsp. equi 4047] gi|225700280|emb|CAW94533.1| putative chromosome partition protein [Streptococcus equi subsp. equi 4047] Length = 1183 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I++ F+ F + KI F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIQMQGFKSFADKTKIIFDKGVTAVVGPNGSGKSNVTESLRWALGEASAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTEHRSPLNYA 78 >gi|330723843|gb|AEC46213.1| Protein P115 [Mycoplasma hyorhinis MCLD] Length = 979 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + KL+ IEI F+ F + I F + + G NG GKS++++AI W+ + ++ G Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIRWVLGEQSAKQLRGL 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCKYQ 108 D + KT P A+ + ++ Sbjct: 61 NMDDVIFAGSKTVKPQEKAMVKLTFK 86 >gi|295094865|emb|CBK83956.1| RecF/RecN/SMC N terminal domain. [Coprococcus sp. ART55/1] Length = 220 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ + + G Sbjct: 1 MYLKSIEVNGFKSFANKIVFKFNHGITCIVGPNGSGKSNVADAVRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|1352653|sp|P41508|P115_MYCHR RecName: Full=Protein P115 gi|150165|gb|AAA25423.1| 115 kDa protein [Mycoplasma hyorhinis] Length = 979 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + KL+ IEI F+ F + I F + + G NG GKS++++AI W+ + ++ G Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIRWVLGEQSAKQLRGL 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCKYQ 108 D + KT P A+ + ++ Sbjct: 61 NMDDVIFAGSKTVKPQEKAMVKLTFK 86 >gi|309800536|ref|ZP_07694687.1| chromosome partition protein smc [Streptococcus infantis SK1302] gi|308115847|gb|EFO53372.1| chromosome partition protein smc [Streptococcus infantis SK1302] Length = 85 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + K+ F +T V G NG GKS+++E++ W + + G Sbjct: 1 MYLKEIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKY 107 + ++ P+ + C + Sbjct: 61 MPDVIFAGTESRKPLKLRFCYCYF 84 >gi|220935194|ref|YP_002514093.1| chromosome segregation SMC protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996504|gb|ACL73106.1| chromosome segregation SMC protein [Thioalkalivibrio sp. HL-EbGR7] Length = 1168 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I+ +L + G NG GKS+ +A+ W+ + + GDS Sbjct: 1 MRLSKIKLAGFKSFVDPTTIDLPSNLVGIVGPNGCGKSNTIDAVRWVMGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MEDVIFNGSSSRKPVGQA 78 >gi|283470447|emb|CAQ49658.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus ST398] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|229822808|ref|ZP_04448878.1| hypothetical protein GCWU000282_00097 [Catonella morbi ATCC 51271] gi|229787621|gb|EEP23735.1| hypothetical protein GCWU000282_00097 [Catonella morbi ATCC 51271] Length = 1177 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI---KKR 90 ++ F+ F + IEF +T V G NG GKS+LSEAI W+ + + G+ + Sbjct: 1 MTGFKSFADKTVIEFDRGMTAVVGPNGSGKSNLSEAIRWVLGEQSAKSLRGNKMEDVIFN 60 Query: 91 SIKTPMPMCMA 101 + + +A Sbjct: 61 GTQARKAVNLA 71 >gi|157961512|ref|YP_001501546.1| chromosome segregation protein SMC [Shewanella pealeana ATCC 700345] gi|157846512|gb|ABV87011.1| chromosome segregation protein SMC [Shewanella pealeana ATCC 700345] Length = 1140 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI + L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPLLNPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|323442326|gb|EGA99956.1| chromosome segregation SMC protein [Staphylococcus aureus O46] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|323441009|gb|EGA98716.1| chromosome segregation SMC protein [Staphylococcus aureus O11] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|52080197|ref|YP_078988.1| chromosome segregation SMC protein-like protein [Bacillus licheniformis ATCC 14580] gi|52785574|ref|YP_091403.1| hypothetical protein BLi01815 [Bacillus licheniformis ATCC 14580] gi|52003408|gb|AAU23350.1| chromosome segregation SMC protein homolg [Bacillus licheniformis ATCC 14580] gi|52348076|gb|AAU40710.1| Smc [Bacillus licheniformis ATCC 14580] Length = 1186 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKKLNLA 78 >gi|283770296|ref|ZP_06343188.1| chromosome segregation protein [Staphylococcus aureus subsp. aureus H19] gi|283460443|gb|EFC07533.1| chromosome segregation protein [Staphylococcus aureus subsp. aureus H19] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|302332838|gb|ADL23031.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|253733528|ref|ZP_04867693.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus TCH130] gi|253728582|gb|EES97311.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus TCH130] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|257425288|ref|ZP_05601713.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427948|ref|ZP_05604346.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus 65-1322] gi|257430581|ref|ZP_05606963.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433342|ref|ZP_05609700.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus E1410] gi|257436184|ref|ZP_05612231.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M876] gi|282910806|ref|ZP_06318609.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WBG10049] gi|282914010|ref|ZP_06321797.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M899] gi|282918932|ref|ZP_06326667.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C427] gi|282924055|ref|ZP_06331731.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C101] gi|293501042|ref|ZP_06666893.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 58-424] gi|293526590|ref|ZP_06671275.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M1015] gi|257271745|gb|EEV03883.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274789|gb|EEV06276.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus 65-1322] gi|257278709|gb|EEV09328.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281435|gb|EEV11572.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus E1410] gi|257284466|gb|EEV14586.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M876] gi|282314027|gb|EFB44419.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C101] gi|282316742|gb|EFB47116.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus C427] gi|282322078|gb|EFB52402.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M899] gi|282325411|gb|EFB55720.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WBG10049] gi|290920662|gb|EFD97725.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus M1015] gi|291096047|gb|EFE26308.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 58-424] gi|312438388|gb|ADQ77459.1| SMC family domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|254523223|ref|ZP_05135278.1| chromosome segregation protein SMC [Stenotrophomonas sp. SKA14] gi|219720814|gb|EED39339.1| chromosome segregation protein SMC [Stenotrophomonas sp. SKA14] Length = 1167 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSNARKPVSQA 78 >gi|190575036|ref|YP_001972881.1| putative chromosome partition protein [Stenotrophomonas maltophilia K279a] gi|190012958|emb|CAQ46590.1| putative chromosome partition protein [Stenotrophomonas maltophilia K279a] Length = 1181 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS Sbjct: 15 MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 74 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 75 LTDVIFSGSNARKPVSQA 92 >gi|194366359|ref|YP_002028969.1| chromosome segregation protein SMC [Stenotrophomonas maltophilia R551-3] gi|194349163|gb|ACF52286.1| chromosome segregation protein SMC [Stenotrophomonas maltophilia R551-3] Length = 1167 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T V G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSNARKPVSQA 78 >gi|82750838|ref|YP_416579.1| chromosome segregation SMC protein [Staphylococcus aureus RF122] gi|82656369|emb|CAI80787.1| chromosome segregation SMC protein [Staphylococcus aureus RF122] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|293510002|ref|ZP_06668710.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M809] gi|291466946|gb|EFF09464.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus M809] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|282916484|ref|ZP_06324246.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus D139] gi|282319924|gb|EFB50272.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus D139] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|114566314|ref|YP_753468.1| chromosome segregation SMC protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337249|gb|ABI68097.1| condensin subunit Smc [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 1191 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + +++ L IV G NG GKS++ +AI W+ + R+ G Sbjct: 1 MYLKRLDIKGFKSFADNTELQLNPGLNIVVGPNGCGKSNIVDAIRWVLGETSIRQLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + MA Sbjct: 61 NEDVIFNGSDKKKALGMA 78 >gi|15924224|ref|NP_371758.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926817|ref|NP_374350.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus N315] gi|148267725|ref|YP_001246668.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH9] gi|150393783|ref|YP_001316458.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH1] gi|156979555|ref|YP_001441814.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu3] gi|253315592|ref|ZP_04838805.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006021|ref|ZP_05144622.2| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795710|ref|ZP_05644689.1| chromosome segregation protein SMC [Staphylococcus aureus A9781] gi|258415934|ref|ZP_05682204.1| condensin subunit SMC [Staphylococcus aureus A9763] gi|258419681|ref|ZP_05682648.1| chromosome segregation protein SMC [Staphylococcus aureus A9719] gi|258444572|ref|ZP_05692901.1| condensin subunit Smc [Staphylococcus aureus A8115] gi|258447595|ref|ZP_05695739.1| chromosome segregation protein SMC [Staphylococcus aureus A6300] gi|258449437|ref|ZP_05697540.1| condensin subunit Smc [Staphylococcus aureus A6224] gi|258454816|ref|ZP_05702780.1| condensin subunit Smc [Staphylococcus aureus A5937] gi|269202850|ref|YP_003282119.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282892721|ref|ZP_06300956.1| chromosome segregation protein SMC [Staphylococcus aureus A8117] gi|282927575|ref|ZP_06335191.1| chromosome segregation protein SMC [Staphylococcus aureus A10102] gi|295407173|ref|ZP_06816974.1| chromosome segregation protein SMC [Staphylococcus aureus A8819] gi|296274791|ref|ZP_06857298.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MR1] gi|297245940|ref|ZP_06929799.1| chromosome segregation protein SMC [Staphylococcus aureus A8796] gi|13701034|dbj|BAB42329.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus N315] gi|14247004|dbj|BAB57396.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu50] gi|147740794|gb|ABQ49092.1| condensin subunit Smc [Staphylococcus aureus subsp. aureus JH9] gi|149946235|gb|ABR52171.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus JH1] gi|156721690|dbj|BAF78107.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus Mu3] gi|257789682|gb|EEV28022.1| chromosome segregation protein SMC [Staphylococcus aureus A9781] gi|257839270|gb|EEV63744.1| condensin subunit SMC [Staphylococcus aureus A9763] gi|257844266|gb|EEV68648.1| chromosome segregation protein SMC [Staphylococcus aureus A9719] gi|257850065|gb|EEV74018.1| condensin subunit Smc [Staphylococcus aureus A8115] gi|257853786|gb|EEV76745.1| chromosome segregation protein SMC [Staphylococcus aureus A6300] gi|257857425|gb|EEV80323.1| condensin subunit Smc [Staphylococcus aureus A6224] gi|257863199|gb|EEV85963.1| condensin subunit Smc [Staphylococcus aureus A5937] gi|262075140|gb|ACY11113.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282590578|gb|EFB95655.1| chromosome segregation protein SMC [Staphylococcus aureus A10102] gi|282764718|gb|EFC04843.1| chromosome segregation protein SMC [Staphylococcus aureus A8117] gi|285816916|gb|ADC37403.1| Chromosome partition protein smc [Staphylococcus aureus 04-02981] gi|294968026|gb|EFG44054.1| chromosome segregation protein SMC [Staphylococcus aureus A8819] gi|297177104|gb|EFH36358.1| chromosome segregation protein SMC [Staphylococcus aureus A8796] gi|312829628|emb|CBX34470.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131027|gb|EFT87011.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus CGS03] gi|329727398|gb|EGG63854.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21172] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|298694527|gb|ADI97749.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus ED133] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|258423925|ref|ZP_05686810.1| chromosome segregation protein SMC [Staphylococcus aureus A9635] gi|257845954|gb|EEV69983.1| chromosome segregation protein SMC [Staphylococcus aureus A9635] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|319646024|ref|ZP_08000254.1| smc protein [Bacillus sp. BT1B_CT2] gi|317391774|gb|EFV72571.1| smc protein [Bacillus sp. BT1B_CT2] Length = 1186 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKKLNLA 78 >gi|225868185|ref|YP_002744133.1| chromosome partition protein [Streptococcus equi subsp. zooepidemicus] gi|225701461|emb|CAW98598.1| putative chromosome partition protein [Streptococcus equi subsp. zooepidemicus] Length = 1183 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I++ F+ F + +I F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIQMQGFKSFADKTRIIFDKGVTAVVGPNGSGKSNVTESLRWALGEASAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTEHRSPLNYA 78 >gi|195978495|ref|YP_002123739.1| chromosome partition protein Smc [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975200|gb|ACG62726.1| chromosome partition protein Smc [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 1183 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I++ F+ F + +I F +T V G NG GKS+++E++ W + + G Sbjct: 1 MFLKEIQMQGFKSFADKTRIIFDKGVTAVVGPNGSGKSNVTESLRWALGEASAKSLRGGK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MPDVIFAGTEHRSPLNYA 78 >gi|21282846|ref|NP_645934.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MW2] gi|49486073|ref|YP_043294.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297208122|ref|ZP_06924553.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912202|ref|ZP_07129645.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus TCH70] gi|21204285|dbj|BAB94982.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus MW2] gi|49244516|emb|CAG42945.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887365|gb|EFH26267.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886448|gb|EFK81650.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus TCH70] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|258434852|ref|ZP_05688926.1| condensin subunit Smc [Staphylococcus aureus A9299] gi|257849213|gb|EEV73195.1| condensin subunit Smc [Staphylococcus aureus A9299] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|49483397|ref|YP_040621.1| chromosome partition protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282903788|ref|ZP_06311676.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus C160] gi|282905552|ref|ZP_06313407.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus Btn1260] gi|282908527|ref|ZP_06316357.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WW2703/97] gi|283957976|ref|ZP_06375427.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295427720|ref|ZP_06820352.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591321|ref|ZP_06949959.1| SMC family domain protein [Staphylococcus aureus subsp. aureus MN8] gi|49241526|emb|CAG40212.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282327589|gb|EFB57872.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330844|gb|EFB60358.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus Btn1260] gi|282595406|gb|EFC00370.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus C160] gi|283790125|gb|EFC28942.1| SMC family, C- domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295128078|gb|EFG57712.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576207|gb|EFH94923.1| SMC family domain protein [Staphylococcus aureus subsp. aureus MN8] gi|315194122|gb|EFU24515.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus CGS00] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|154686010|ref|YP_001421171.1| hypothetical protein RBAM_015770 [Bacillus amyloliquefaciens FZB42] gi|154351861|gb|ABS73940.1| Smc [Bacillus amyloliquefaciens FZB42] Length = 1186 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|308190055|ref|YP_003922986.1| segregation of chromosomes protein [Mycoplasma fermentans JER] gi|319777349|ref|YP_004137000.1| p115-like abc transporter ATP-binding protein [Mycoplasma fermentans M64] gi|307624797|gb|ADN69102.1| segregation of chromosomes protein [Mycoplasma fermentans JER] gi|318038424|gb|ADV34623.1| P115-Like ABC transporter ATP-Binding Protein [Mycoplasma fermentans M64] Length = 991 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F + ++F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKVEAHGFKSFADPIVLKFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMAV 102 + KT PM AV Sbjct: 61 MDDVIFAGSKTAKPMDKAV 79 >gi|331015923|gb|EGH95979.1| chromosome segregation protein SMC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|331013368|gb|EGH93424.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330963252|gb|EGH63512.1| chromosome segregation protein SMC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330960231|gb|EGH60491.1| chromosome segregation protein SMC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330939978|gb|EGH43179.1| chromosome segregation protein SMC [Pseudomonas syringae pv. pisi str. 1704B] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330897712|gb|EGH29131.1| chromosome segregation protein SMC [Pseudomonas syringae pv. japonica str. M301072PT] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330879783|gb|EGH13932.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. race 4] Length = 390 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330879148|gb|EGH13297.1| chromosome segregation protein SMC [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|330808454|ref|YP_004352916.1| chromosome partition protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376562|gb|AEA67912.1| Putative chromosome partition protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|325917959|ref|ZP_08180128.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] gi|325535816|gb|EGD07643.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVSQA 78 >gi|320323493|gb|EFW79578.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. B076] gi|320329464|gb|EFW85456.1| chromosome segregation protein SMC [Pseudomonas syringae pv. glycinea str. race 4] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|312962452|ref|ZP_07776943.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] gi|311283379|gb|EFQ61969.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|302185112|ref|ZP_07261785.1| chromosome segregation protein SMC [Pseudomonas syringae pv. syringae 642] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|298486338|ref|ZP_07004401.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159345|gb|EFI00403.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|289626388|ref|ZP_06459342.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649543|ref|ZP_06480886.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. 2250] gi|330866313|gb|EGH01022.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|229591995|ref|YP_002874114.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] gi|229363861|emb|CAY51329.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|213968902|ref|ZP_03397042.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] gi|301385374|ref|ZP_07233792.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato Max13] gi|302063630|ref|ZP_07255171.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato K40] gi|302133899|ref|ZP_07259889.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926201|gb|EEB59756.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|28870813|ref|NP_793432.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854062|gb|AAO57127.1| chromosome segregation SMC protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|71733473|ref|YP_274011.1| chromosome segregation protein SMC [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554026|gb|AAZ33237.1| chromosome segregation protein SMC [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|70729273|ref|YP_259010.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] gi|68343572|gb|AAY91178.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|77458026|ref|YP_347531.1| condensin subunit Smc [Pseudomonas fluorescens Pf0-1] gi|77382029|gb|ABA73542.1| putative chromosome partition protein [Pseudomonas fluorescens Pf0-1] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|66045061|ref|YP_234902.1| SMC protein, N-terminal:structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Pseudomonas syringae pv. syringae B728a] gi|63255768|gb|AAY36864.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Pseudomonas syringae pv. syringae B728a] Length = 1162 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|297588525|ref|ZP_06947168.1| chromosome segregation protein Smc [Finegoldia magna ATCC 53516] gi|297573898|gb|EFH92619.1| chromosome segregation protein Smc [Finegoldia magna ATCC 53516] Length = 1167 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ Sbjct: 1 MGLKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFAGTQKEKPVNFA 78 >gi|284024158|ref|ZP_06378556.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 132] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|88800011|ref|ZP_01115582.1| hypothetical protein MED297_17912 [Reinekea sp. MED297] gi|88777289|gb|EAR08493.1| hypothetical protein MED297_17912 [Reinekea sp. MED297] Length = 1166 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI F +L+ + G NG GKS+ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTKIPFPTNLSAIVGPNGCGKSNTIDAVRWVMGESSAKHLRGES 60 Query: 87 ---IKKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 KTDVIFNGSNSRKP----VSQCSVEL 82 >gi|315198473|gb|EFU28802.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus CGS01] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|57651803|ref|YP_186109.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87160811|ref|YP_493824.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194941|ref|YP_499741.1| SMC domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221356|ref|YP_001332178.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161509406|ref|YP_001575065.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142024|ref|ZP_03566517.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452532|ref|ZP_05700538.1| chromosome segregation protein SMC [Staphylococcus aureus A5948] gi|262051863|ref|ZP_06024079.1| chromosome segregation SMC protein [Staphylococcus aureus 930918-3] gi|282920017|ref|ZP_06327746.1| chromosome segregation protein SMC [Staphylococcus aureus A9765] gi|294848228|ref|ZP_06788975.1| chromosome segregation protein SMC [Staphylococcus aureus A9754] gi|304381202|ref|ZP_07363855.1| SMC family domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57285989|gb|AAW38083.1| chromosome segregation SMC protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87126785|gb|ABD21299.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202499|gb|ABD30309.1| SMC family, C-terminal domain family [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374156|dbj|BAF67416.1| chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368215|gb|ABX29186.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859750|gb|EEV82592.1| chromosome segregation protein SMC [Staphylococcus aureus A5948] gi|259160264|gb|EEW45292.1| chromosome segregation SMC protein [Staphylococcus aureus 930918-3] gi|282594733|gb|EFB99717.1| chromosome segregation protein SMC [Staphylococcus aureus A9765] gi|294825028|gb|EFG41450.1| chromosome segregation protein SMC [Staphylococcus aureus A9754] gi|302751057|gb|ADL65234.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340185|gb|EFM06126.1| SMC family domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140950|gb|EFW32797.1| segregation protein SMC [Staphylococcus aureus subsp. aureus MRSA131] gi|320144335|gb|EFW36101.1| segregation protein SMC [Staphylococcus aureus subsp. aureus MRSA177] gi|329313903|gb|AEB88316.1| Chromosome segregation SMC protein [Staphylococcus aureus subsp. aureus T0131] gi|329724768|gb|EGG61273.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21189] gi|329733654|gb|EGG69982.1| chromosome segregation protein SMC [Staphylococcus aureus subsp. aureus 21193] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|308173557|ref|YP_003920262.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens DSM 7] gi|307606421|emb|CBI42792.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens DSM 7] Length = 1186 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|269940726|emb|CBI49107.1| putative chromosome partition protein [Staphylococcus aureus subsp. aureus TW20] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|223043720|ref|ZP_03613763.1| chromosome segregation protein SMC [Staphylococcus capitis SK14] gi|222442817|gb|EEE48919.1| chromosome segregation protein SMC [Staphylococcus capitis SK14] Length = 1189 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|328553510|gb|AEB24002.1| chromosome partition protein SMC [Bacillus amyloliquefaciens TA208] gi|328911698|gb|AEB63294.1| chromosome condensation and segregation SMC ATPase [Bacillus amyloliquefaciens LL3] Length = 1186 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS+++EAI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITEAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|314933412|ref|ZP_07840777.1| cell division protein Smc [Staphylococcus caprae C87] gi|313653562|gb|EFS17319.1| cell division protein Smc [Staphylococcus caprae C87] Length = 1189 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|262048132|ref|ZP_06021019.1| chromosome segregation SMC protein [Staphylococcus aureus D30] gi|259163698|gb|EEW48253.1| chromosome segregation SMC protein [Staphylococcus aureus D30] Length = 1188 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|269115245|ref|YP_003303008.1| ABC transporter ATP-binding protein [Mycoplasma hominis] gi|268322870|emb|CAX37605.1| P115-like (Mycoplasma hyorhinis) ABCtransporter ATP-binding protein [Mycoplasma hominis ATCC 23114] Length = 978 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F + ++F + + G NG GKS++++AI W+ + + GD+ Sbjct: 1 MKLIQVEAHGFKSFADKVTLKFDGGIVAIIGPNGSGKSNINDAIRWVLGETSSKVLRGDT 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT M A Sbjct: 61 MEDVIFSGSKTEKEMDRA 78 >gi|253731851|ref|ZP_04866016.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724450|gb|EES93179.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 1153 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|307244211|ref|ZP_07526326.1| chromosome segregation protein SMC [Peptostreptococcus stomatis DSM 17678] gi|306492361|gb|EFM64399.1| chromosome segregation protein SMC [Peptostreptococcus stomatis DSM 17678] Length = 1183 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F I F +T V G NG GKS++S+AI W+ + + G+ Sbjct: 1 MYLKKLELKGFKSFPTKTDIYFDKGVTAVVGPNGSGKSNISDAIRWVLGEQSVKSLRGEK 60 Query: 87 I---KKRSIKTPMPMC 99 + + M Sbjct: 61 MEDVIFLGTDSKNQMN 76 >gi|302335831|ref|YP_003801038.1| condensin subunit Smc [Olsenella uli DSM 7084] gi|301319671|gb|ADK68158.1| condensin subunit Smc [Olsenella uli DSM 7084] Length = 1177 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + ++ F LT+V G NG GKS++S+AI W+ + + G + Sbjct: 1 MYLKSLTLRGFKSFADKTQMAFDPGLTVVVGPNGSGKSNISDAILWVLGEQSAKMLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|262276826|ref|ZP_06054619.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114] gi|262223929|gb|EEY74388.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114] Length = 809 Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K +IE+S F+ F + F LT + G NG GKS++ EA+ W + + G Sbjct: 1 MKFKEIEVSGFKSFADKTNFYFEKGLTGIVGPNGCGKSNVVEALRWAMGETSAKSLRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|238809525|dbj|BAH69315.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 1001 Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E F+ F + ++F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 11 MKLIKVEAHGFKSFADPIVLKFDGGVAGIVGPNGSGKSNINDAIKWVLGERSAKELRGDN 70 Query: 87 I---KKRSIKTPMPMCMAV 102 + KT PM AV Sbjct: 71 MDDVIFAGSKTAKPMDKAV 89 >gi|311068115|ref|YP_003973038.1| chromosome segregation SMC protein [Bacillus atrophaeus 1942] gi|310868632|gb|ADP32107.1| chromosome segregation SMC protein [Bacillus atrophaeus 1942] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|315658481|ref|ZP_07911353.1| SMC family domain protein [Staphylococcus lugdunensis M23590] gi|315496810|gb|EFU85133.1| SMC family domain protein [Staphylococcus lugdunensis M23590] Length = 1189 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F E ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFAEHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|289550986|ref|YP_003471890.1| Chromosome partition protein smc [Staphylococcus lugdunensis HKU09-01] gi|289180518|gb|ADC87763.1| Chromosome partition protein smc [Staphylococcus lugdunensis HKU09-01] Length = 1189 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F E ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFAEHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|221309469|ref|ZP_03591316.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. 168] gi|221313794|ref|ZP_03595599.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318718|ref|ZP_03600012.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. JH642] gi|221322989|ref|ZP_03604283.1| chromosome segregation SMC protein homolg [Bacillus subtilis subsp. subtilis str. SMY] gi|255767364|ref|NP_389476.2| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168] gi|239938850|sp|P51834|SMC_BACSU RecName: Full=Chromosome partition protein smc gi|225184991|emb|CAB13467.2| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|124002756|ref|ZP_01687608.1| chromosome segregation protein SMC [Microscilla marina ATCC 23134] gi|123991984|gb|EAY31371.1| chromosome segregation protein SMC [Microscilla marina ATCC 23134] Length = 1200 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + I+F +T + G NG GKS++ +AI W+ + D Sbjct: 1 MLLKKLEIKGFKSFGDKVHIDFTTGVTGIVGPNGCGKSNVVDAIRWVLGEQRTKNLRSDK 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|291559018|emb|CBL37818.1| condensin subunit Smc [butyrate-producing bacterium SSC/2] Length = 1185 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ ++ G Sbjct: 1 MYLKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + PM A Sbjct: 61 MEDVIFSGTELRKPMGSA 78 >gi|167765552|ref|ZP_02437616.1| hypothetical protein CLOSS21_00046 [Clostridium sp. SS2/1] gi|167712737|gb|EDS23316.1| hypothetical protein CLOSS21_00046 [Clostridium sp. SS2/1] Length = 1185 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ ++ G Sbjct: 1 MYLKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + PM A Sbjct: 61 MEDVIFSGTELRKPMGSA 78 >gi|254480602|ref|ZP_05093849.1| chromosome segregation protein SMC [marine gamma proteobacterium HTCC2148] gi|214039185|gb|EEB79845.1| chromosome segregation protein SMC [marine gamma proteobacterium HTCC2148] Length = 1165 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNVIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|296331169|ref|ZP_06873643.1| chromosome segregation SMC protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674325|ref|YP_003865997.1| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151813|gb|EFG92688.1| chromosome segregation SMC protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412569|gb|ADM37688.1| chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. spizizenii str. W23] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|321315360|ref|YP_004207647.1| chromosome partition protein SMC [Bacillus subtilis BSn5] gi|320021634|gb|ADV96620.1| chromosome partition protein SMC [Bacillus subtilis BSn5] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|304373284|ref|YP_003856493.1| Protein P115 [Mycoplasma hyorhinis HUB-1] gi|304309475|gb|ADM21955.1| Protein P115 [Mycoplasma hyorhinis HUB-1] Length = 979 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + KL+ IEI F+ F + I F + + G NG GKS++++AI+W+ + ++ G Sbjct: 1 MLKLIKIEIEGFKSFADPISINFDGSVVGIVGPNGSGKSNINDAIKWVLGEQSAKQLRGL 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCKYQ 108 D + KT P A+ + ++ Sbjct: 61 NMDDVIFAGSKTVKPQEKAMVKLTFK 86 >gi|254283161|ref|ZP_04958129.1| chromosome segregation protein SMC [gamma proteobacterium NOR51-B] gi|219679364|gb|EED35713.1| chromosome segregation protein SMC [gamma proteobacterium NOR51-B] Length = 1166 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKTIQLAGFKSFVDPTTVSFPSNMSAVVGPNGCGKSNVIDAVRWVMGESSAKTLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|317131323|ref|YP_004090637.1| chromosome segregation protein SMC [Ethanoligenens harbinense YUAN-3] gi|315469302|gb|ADU25906.1| chromosome segregation protein SMC [Ethanoligenens harbinense YUAN-3] Length = 1193 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + + F +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MYLKSLTIQGFKSFPDKTVLTFGPGITAVVGPNGSGKSNISDAIRWVLGEMSVKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|268316211|ref|YP_003289930.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] gi|262333745|gb|ACY47542.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] Length = 1185 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + + F +T + G NG GKS+L +A+ W+ R + Sbjct: 1 MYLSKLELQGFKSFADRTVLHFDPGITAIVGPNGCGKSNLVDAVRWVIGEQRARVLRSER 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MEHVIFNGTARRRPVGMA 78 >gi|229825032|ref|ZP_04451101.1| hypothetical protein GCWU000182_00382 [Abiotrophia defectiva ATCC 49176] gi|229790779|gb|EEP26893.1| hypothetical protein GCWU000182_00382 [Abiotrophia defectiva ATCC 49176] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F F +T + G NG GKS++++A+ W+ + ++ G Sbjct: 1 MYLKSVEIQGFKSFANKIVFSFEGGITGIVGPNGSGKSNVADAVRWVLGEQSAKQLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291484145|dbj|BAI85220.1| chromosome segregation SMC protein homologue [Bacillus subtilis subsp. natto BEST195] Length = 1186 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + R G Sbjct: 1 MFLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRLNLA 78 >gi|255318626|ref|ZP_05359857.1| chromosome segregation protein SMC [Acinetobacter radioresistens SK82] gi|262379148|ref|ZP_06072304.1| chromosome segregation protein SMC [Acinetobacter radioresistens SH164] gi|255304308|gb|EET83494.1| chromosome segregation protein SMC [Acinetobacter radioresistens SK82] gi|262298605|gb|EEY86518.1| chromosome segregation protein SMC [Acinetobacter radioresistens SH164] Length = 1149 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F D + V G NG GKS++ +AI W+ + R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFRDSRSAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ MA Sbjct: 61 MQDVIFTGTAKRKPVGMA 78 >gi|303242100|ref|ZP_07328591.1| chromosome segregation protein SMC [Acetivibrio cellulolyticus CD2] gi|302590394|gb|EFL60151.1| chromosome segregation protein SMC [Acetivibrio cellulolyticus CD2] Length = 1190 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + +EF +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MHLKRLEIQGFKSFADKINLEFNSGITAVVGPNGSGKSNISDAIRWVLGEQSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|257458232|ref|ZP_05623382.1| chromosome segregation protein SMC [Treponema vincentii ATCC 35580] gi|257444342|gb|EEV19435.1| chromosome segregation protein SMC [Treponema vincentii ATCC 35580] Length = 982 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + +IEFA+ +T + G NG GKS++ +A++W+ + + Sbjct: 1 MFLKSLEIFGFKSFADRTRIEFAEGITALLGPNGCGKSNVVDAMKWVLGEQASKTLRAEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ + +A Sbjct: 61 MEDVIFNGTESRKALNVA 78 >gi|313897414|ref|ZP_07830957.1| chromosome segregation protein SMC [Clostridium sp. HGF2] gi|312957784|gb|EFR39409.1| chromosome segregation protein SMC [Clostridium sp. HGF2] Length = 976 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + I F + + G NG GKS++++AI W+ + + G++ Sbjct: 1 MFLKRIELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGNN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + MA Sbjct: 61 MSDVIFSGSTARKAVNMA 78 >gi|149173803|ref|ZP_01852432.1| chromosome segregation SMC protein [Planctomyces maris DSM 8797] gi|148847333|gb|EDL61667.1| chromosome segregation SMC protein [Planctomyces maris DSM 8797] Length = 1307 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + EF+D +T V G NG GKS++ + I+W+ + + G + Sbjct: 2 LKSLELFGFKSFADRTIFEFSDGITCVVGPNGSGKSNVVDGIKWVLGDQSPKSLRGKDMT 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|170722765|ref|YP_001750453.1| chromosome segregation protein SMC [Pseudomonas putida W619] gi|169760768|gb|ACA74084.1| chromosome segregation protein SMC [Pseudomonas putida W619] Length = 1162 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|104780919|ref|YP_607417.1| chromosome segregation SMC protein [Pseudomonas entomophila L48] gi|95109906|emb|CAK14611.1| Putative chromosome segregation SMC protein [Pseudomonas entomophila L48] Length = 1162 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|331007039|ref|ZP_08330272.1| Chromosome partition protein smc [gamma proteobacterium IMCC1989] gi|330419149|gb|EGG93582.1| Chromosome partition protein smc [gamma proteobacterium IMCC1989] Length = 1168 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVSFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|229918602|ref|YP_002887248.1| chromosome segregation protein SMC [Exiguobacterium sp. AT1b] gi|229470031|gb|ACQ71803.1| chromosome segregation protein SMC [Exiguobacterium sp. AT1b] Length = 1185 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F + +++F +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MHLKRIELAGFKSFAKRIELDFRPGVTAVVGPNGSGKSNISDAVRWVLGEQSAKSLRGAK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|70726681|ref|YP_253595.1| chromosome segregation SMC protein [Staphylococcus haemolyticus JCSC1435] gi|68447405|dbj|BAE04989.1| chromosome segregation SMC protein [Staphylococcus haemolyticus JCSC1435] Length = 1189 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTDVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGS 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|311746977|ref|ZP_07720762.1| putative SMC family protein [Algoriphagus sp. PR1] gi|126578674|gb|EAZ82838.1| putative SMC family protein [Algoriphagus sp. PR1] Length = 1179 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + I F +T V G NG GKS++ +AI W+ R D Sbjct: 1 MLLSKLEIKGFKSFGDKMVIHFDKGITGVVGPNGCGKSNVVDAIRWVLGEQKTRMLRSDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT P +A Sbjct: 61 MENVIFNGTKTRKPSNLA 78 >gi|92112829|ref|YP_572757.1| chromosome segregation protein SMC [Chromohalobacter salexigens DSM 3043] gi|91795919|gb|ABE58058.1| Chromosome segregation protein SMC [Chromohalobacter salexigens DSM 3043] Length = 1164 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++ F+ F + + FA ++T + G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLTSIKLVGFKSFVDAVNVPFAGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|257784654|ref|YP_003179871.1| chromosome segregation protein SMC [Atopobium parvulum DSM 20469] gi|257473161|gb|ACV51280.1| chromosome segregation protein SMC [Atopobium parvulum DSM 20469] Length = 1179 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + ++ F LT+V G NG GKS++S+AI W+ + + G + Sbjct: 1 MYLKSLTLKGFKSFADKTQMVFDPGLTVVVGPNGSGKSNVSDAILWVLGEQSAKMLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|119503163|ref|ZP_01625247.1| chromosome segregation protein [marine gamma proteobacterium HTCC2080] gi|119460809|gb|EAW41900.1| chromosome segregation protein [marine gamma proteobacterium HTCC2080] Length = 1165 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G++ Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNMCSVVGPNGCGKSNIIDAVRWVLGESSAKNLRGEA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|307546311|ref|YP_003898790.1| chromosome segregation protein [Halomonas elongata DSM 2581] gi|307218335|emb|CBV43605.1| K03529 chromosome segregation protein [Halomonas elongata DSM 2581] Length = 1164 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++T + G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLTSIRLAGFKSFVDPISVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|257454406|ref|ZP_05619668.1| SMC domain protein [Enhydrobacter aerosaccus SK60] gi|257448172|gb|EEV23153.1| SMC domain protein [Enhydrobacter aerosaccus SK60] Length = 1215 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKQLKLAGFKSFANPTTFHFPKTITAIVGPNGCGKSNVIDAIRWVLGESSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|323702684|ref|ZP_08114345.1| chromosome segregation protein SMC [Desulfotomaculum nigrificans DSM 574] gi|323532347|gb|EGB22225.1| chromosome segregation protein SMC [Desulfotomaculum nigrificans DSM 574] Length = 1187 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI- 87 L ++I F+ F + K+E LT+V G NG GKS++S+AI W G + Sbjct: 3 LKRLDIQGFKSFADRIKLELNPGLTVVVGPNGSGKSNISDAISWCLGEQRASSLRGSRME 62 Query: 88 --KKRSIKTPMPMCMA 101 P+ MA Sbjct: 63 DVIFAGSDKRKPVGMA 78 >gi|269836286|ref|YP_003318514.1| chromosome segregation protein SMC [Sphaerobacter thermophilus DSM 20745] gi|269785549|gb|ACZ37692.1| chromosome segregation protein SMC [Sphaerobacter thermophilus DSM 20745] Length = 1183 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 +L +E+ F+ F F +T + G NG GKS+++EA+ W + G Sbjct: 4 RLKRLELHGFKSFATPTTFVFDPGITAIIGPNGSGKSNIAEAVRWALGEQSYASLRGRRT 63 Query: 85 DSIKKRSIKTPMPMCMA 101 + + P+ MA Sbjct: 64 EDVIFAGSAARAPLGMA 80 >gi|170759730|ref|YP_001787764.1| chromosome segregation protein SMC [Clostridium botulinum A3 str. Loch Maree] gi|169406719|gb|ACA55130.1| chromosome segregation protein SMC [Clostridium botulinum A3 str. Loch Maree] Length = 1193 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|90021524|ref|YP_527351.1| condensin subunit Smc [Saccharophagus degradans 2-40] gi|89951124|gb|ABD81139.1| condensin subunit Smc [Saccharophagus degradans 2-40] Length = 1168 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTTVNFPSNLCSVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|88703480|ref|ZP_01101196.1| chromosome segregation SMC protein [Congregibacter litoralis KT71] gi|88702194|gb|EAQ99297.1| chromosome segregation SMC protein [Congregibacter litoralis KT71] Length = 1166 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTAVHFPSNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|326577833|gb|EGE27701.1| condensin subunit Smc [Moraxella catarrhalis O35E] Length = 589 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|326573074|gb|EGE23047.1| condensin subunit Smc [Moraxella catarrhalis CO72] Length = 1208 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|326570688|gb|EGE20722.1| condensin subunit Smc [Moraxella catarrhalis BC1] Length = 1202 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|326568009|gb|EGE18101.1| condensin subunit Smc [Moraxella catarrhalis BC7] Length = 1202 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|326564120|gb|EGE14358.1| condensin subunit Smc [Moraxella catarrhalis 46P47B1] Length = 1208 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|326561539|gb|EGE11882.1| condensin subunit Smc [Moraxella catarrhalis 7169] gi|326564821|gb|EGE15029.1| condensin subunit Smc [Moraxella catarrhalis 12P80B1] gi|326566503|gb|EGE16650.1| condensin subunit Smc [Moraxella catarrhalis 103P14B1] gi|326571244|gb|EGE21267.1| condensin subunit Smc [Moraxella catarrhalis BC8] gi|326577228|gb|EGE27121.1| condensin subunit Smc [Moraxella catarrhalis 101P30B1] Length = 1208 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|296112502|ref|YP_003626440.1| condensin subunit Smc [Moraxella catarrhalis RH4] gi|295920196|gb|ADG60547.1| condensin subunit Smc [Moraxella catarrhalis RH4] Length = 1208 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F F +T + G NG GKS++ +AI W+ + ++ G + Sbjct: 1 MRLKSLKLAGFKSFANPTTFTFRHDITAIVGPNGCGKSNVIDAIRWVLGETSAKQLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|320120432|gb|EFE27625.2| SMC family protein [Filifactor alocis ATCC 35896] Length = 1180 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL IE+ F+ F KI F D L + G NG GKS++ +A W+ + + G+ Sbjct: 1 MKLKSIELKGFKSFQNKTKIVFPVDGLVSIVGPNGSGKSNVLDAFRWVLGEQSAKTLRGE 60 Query: 86 SI---KKRSIKTPMPMCM 100 + + P+ M Sbjct: 61 KMEDVIFSGTQFKKPLNM 78 >gi|300814476|ref|ZP_07094737.1| chromosome segregation protein SMC [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511394|gb|EFK38633.1| chromosome segregation protein SMC [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 1178 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + I F+ F + KIEF +T + G NG GKS++++AI W+ + + G Sbjct: 1 MYLKAVYIEGFKSFAKKTKIEFNKDITAIVGPNGSGKSNITDAIMWVLGESSAKNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I P+ +A Sbjct: 61 MEDIIFSGTDNMRPLGLA 78 >gi|73662844|ref|YP_301625.1| chromosome segregation SMC protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495359|dbj|BAE18680.1| chromosome segregation SMC protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 1189 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F E ++F + +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAFGFKSFAEHTNVQFDEGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCKYQ 108 + I + A + K + Sbjct: 61 KMEDIIFSGAEHRKAQNYAEVKLKLE 86 >gi|319401474|gb|EFV89684.1| chromosome segregation protein SMC [Staphylococcus epidermidis FRI909] Length = 1189 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 + I + A + K Sbjct: 61 KMEDIIFSGAEHRKAQNFAEVKLK 84 >gi|254448680|ref|ZP_05062138.1| chromosome segregation protein SMC [gamma proteobacterium HTCC5015] gi|198261688|gb|EDY85975.1| chromosome segregation protein SMC [gamma proteobacterium HTCC5015] Length = 1168 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I F +LT + G NG GKS+ +A+ W+ + + G S Sbjct: 1 MRLSKIKLAGFKSFVDPTTIAFPTNLTGIIGPNGCGKSNTIDAVRWVMGESSAKHLRGAS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|313672426|ref|YP_004050537.1| chromosome segregation protein smc [Calditerrivibrio nitroreducens DSM 19672] gi|312939182|gb|ADR18374.1| chromosome segregation protein SMC [Calditerrivibrio nitroreducens DSM 19672] Length = 1118 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + I F+ F + I+F D +T + G NG GKS++ +AI W+ + G Sbjct: 1 MKFKKLIIQGFKSFVDKTVIDFPDGITCIVGPNGSGKSNILDAIRWILGEQNPKELRGSD 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D I + +A Sbjct: 61 MDDIIFAGSEKRSQSNVA 78 >gi|317498508|ref|ZP_07956802.1| RecF/RecN/SMC N terminal domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894201|gb|EFV16389.1| RecF/RecN/SMC N terminal domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 469 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE++ F+ F +F +T + G NG GKS++++A+ W+ ++ G Sbjct: 3 MYLKSIEVNGFKSFAHKMIFKFEHGITGIVGPNGSGKSNVADAVRWVLGEQRAKQLRGSR 62 Query: 87 I---KKRSIKTPMPMCMA 101 + + PM A Sbjct: 63 MEDVIFSGTELRKPMGSA 80 >gi|291288119|ref|YP_003504935.1| chromosome segregation protein SMC [Denitrovibrio acetiphilus DSM 12809] gi|290885279|gb|ADD68979.1| chromosome segregation protein SMC [Denitrovibrio acetiphilus DSM 12809] Length = 1111 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + + F+ F + IEF +T V G NG GKS++ +AI W+F + + G Sbjct: 1 MKFKSLVVQGFKSFVDKTVIEFPGGITCVIGPNGSGKSNILDAIRWIFGEQSAKELRGAD 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + + P A Sbjct: 61 MDDVIFAGSQHRKPTGFA 78 >gi|153938415|ref|YP_001391750.1| chromosome segregation protein SMC [Clostridium botulinum F str. Langeland] gi|152934311|gb|ABS39809.1| chromosome segregation protein SMC [Clostridium botulinum F str. Langeland] Length = 1193 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|15839147|ref|NP_299835.1| chromosome segregation protein [Xylella fastidiosa 9a5c] gi|9107770|gb|AAF85355.1|AE004063_4 chromosome segregation protein [Xylella fastidiosa 9a5c] Length = 1167 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTCIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|167624498|ref|YP_001674792.1| chromosome segregation protein SMC [Shewanella halifaxensis HAW-EB4] gi|167354520|gb|ABZ77133.1| chromosome segregation protein SMC [Shewanella halifaxensis HAW-EB4] Length = 1143 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + KI L+ + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPLLSPLSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MADVIFNGSTARRPVSVA 78 >gi|170756367|ref|YP_001781995.1| chromosome segregation protein SMC [Clostridium botulinum B1 str. Okra] gi|169121579|gb|ACA45415.1| chromosome segregation protein SMC [Clostridium botulinum B1 str. Okra] Length = 1193 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|293366801|ref|ZP_06613477.1| SMC family domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319102|gb|EFE59472.1| SMC family domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329736623|gb|EGG72889.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU045] Length = 1189 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 + I + A + K Sbjct: 61 KMEDIIFSGAEHRKAQNFAEVKLK 84 >gi|282882384|ref|ZP_06291012.1| chromosome segregation protein SMC [Peptoniphilus lacrimalis 315-B] gi|281297805|gb|EFA90273.1| chromosome segregation protein SMC [Peptoniphilus lacrimalis 315-B] Length = 1178 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + I F+ F + KIEF +T + G NG GKS++++AI W+ + + G Sbjct: 1 MYLKAVYIEGFKSFAKKTKIEFNKDITAIVGPNGSGKSNITDAIMWVLGESSAKNLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I P+ +A Sbjct: 61 MEDIIFSGTDNMRPLGLA 78 >gi|319789067|ref|YP_004150700.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] gi|317113569|gb|ADU96059.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] Length = 1171 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 36/61 (59%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ F+ F + +I F++ + + G NG GKS++ +A++W+ G + + DSIK Sbjct: 2 IRSLKLKGFKSFADETEIRFSEGINCIVGPNGCGKSNIVDALKWVVGGTSPKGMRADSIK 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|254514183|ref|ZP_05126244.1| chromosome segregation protein SMC [gamma proteobacterium NOR5-3] gi|219676426|gb|EED32791.1| chromosome segregation protein SMC [gamma proteobacterium NOR5-3] Length = 1166 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTAVHFPTNMSAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|289423975|ref|ZP_06425767.1| chromosome segregation protein SMC [Peptostreptococcus anaerobius 653-L] gi|289155611|gb|EFD04284.1| chromosome segregation protein SMC [Peptostreptococcus anaerobius 653-L] Length = 1182 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F I F +T + G NG GKS++S+A+ W+ + + G+ Sbjct: 1 MYLKKLELKGFKSFPMKTDIFFDKGVTAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGEK 60 Query: 87 I---KKRSIKTPMPMC 99 + + M Sbjct: 61 MEDVIFSGTDSKKAMN 76 >gi|57866685|ref|YP_188383.1| chromosome segregation SMC protein [Staphylococcus epidermidis RP62A] gi|242242517|ref|ZP_04796962.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis W23144] gi|57637343|gb|AAW54131.1| chromosome segregation SMC protein, putative [Staphylococcus epidermidis RP62A] gi|242234025|gb|EES36337.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis W23144] Length = 1189 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 + I + A + K Sbjct: 61 KMEDIIFSGAEHRKAQNFAEVKLK 84 >gi|168180667|ref|ZP_02615331.1| chromosome segregation protein SMC [Clostridium botulinum NCTC 2916] gi|226949805|ref|YP_002804896.1| chromosome segregation protein SMC [Clostridium botulinum A2 str. Kyoto] gi|182668486|gb|EDT80465.1| chromosome segregation protein SMC [Clostridium botulinum NCTC 2916] gi|226844084|gb|ACO86750.1| chromosome segregation protein SMC [Clostridium botulinum A2 str. Kyoto] Length = 1193 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|167037692|ref|YP_001665270.1| chromosome segregation protein SMC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116107|ref|YP_004186266.1| chromosome segregation protein SMC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856526|gb|ABY94934.1| chromosome segregation protein SMC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929198|gb|ADV79883.1| chromosome segregation protein SMC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 1196 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + ++F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLDFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|27467827|ref|NP_764464.1| chromosome segregation SMC protein [Staphylococcus epidermidis ATCC 12228] gi|251810664|ref|ZP_04825137.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis BCM-HMP0060] gi|282876334|ref|ZP_06285201.1| chromosome segregation protein SMC [Staphylococcus epidermidis SK135] gi|27315372|gb|AAO04506.1|AE016747_3 chromosome segregation SMC protein [Staphylococcus epidermidis ATCC 12228] gi|251805824|gb|EES58481.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295359|gb|EFA87886.1| chromosome segregation protein SMC [Staphylococcus epidermidis SK135] gi|329736298|gb|EGG72570.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU028] Length = 1189 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 + I + A + K Sbjct: 61 KMEDIIFSGAEHRKAQNFAEVKLK 84 >gi|328948170|ref|YP_004365507.1| chromosome segregation protein SMC [Treponema succinifaciens DSM 2489] gi|328448494|gb|AEB14210.1| chromosome segregation protein SMC [Treponema succinifaciens DSM 2489] Length = 984 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + I FAD +T + G NG GKS++ +AI+W+ + +S Sbjct: 1 MFLKSLEIFGFKSFADRTHINFADGITALLGPNGCGKSNVVDAIKWVLAENRSKNLRAES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T + MA Sbjct: 61 MEDVIFNGTETRPALSMA 78 >gi|168184658|ref|ZP_02619322.1| chromosome segregation protein SMC [Clostridium botulinum Bf] gi|182672317|gb|EDT84278.1| chromosome segregation protein SMC [Clostridium botulinum Bf] Length = 1193 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|148380410|ref|YP_001254951.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 3502] gi|148289894|emb|CAL84002.1| chromosome partition protein Smc [Clostridium botulinum A str. ATCC 3502] Length = 1193 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|90416523|ref|ZP_01224454.1| hypothetical protein GB2207_04957 [marine gamma proteobacterium HTCC2207] gi|90331722|gb|EAS46950.1| hypothetical protein GB2207_04957 [marine gamma proteobacterium HTCC2207] Length = 1165 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKSIKLAGFKSFVDPTSVHFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|322806717|emb|CBZ04286.1| chromosome partition protein smc [Clostridium botulinum H04402 065] Length = 1193 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|153931137|ref|YP_001384627.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 19397] gi|153936718|ref|YP_001388144.1| chromosome segregation protein SMC [Clostridium botulinum A str. Hall] gi|152927181|gb|ABS32681.1| chromosome segregation protein SMC [Clostridium botulinum A str. ATCC 19397] gi|152932632|gb|ABS38131.1| chromosome segregation protein SMC [Clostridium botulinum A str. Hall] Length = 1193 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|154483580|ref|ZP_02026028.1| hypothetical protein EUBVEN_01284 [Eubacterium ventriosum ATCC 27560] gi|149735490|gb|EDM51376.1| hypothetical protein EUBVEN_01284 [Eubacterium ventriosum ATCC 27560] Length = 1186 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F +F + +T + G NG GKS++++A+ W+ ++ Sbjct: 1 MYLKNIEIHGFKSFANKINFQFHNGITGIVGPNGSGKSNVADAVRWVLGEQKTKQLRSSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + PM A Sbjct: 61 MEDVIFAGTENRKPMGYA 78 >gi|194014505|ref|ZP_03053122.1| chromosome segregation protein SMC [Bacillus pumilus ATCC 7061] gi|194013531|gb|EDW23096.1| chromosome segregation protein SMC [Bacillus pumilus ATCC 7061] Length = 1186 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFAQRVTVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRVNLA 78 >gi|242373526|ref|ZP_04819100.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis M23864:W1] gi|242348889|gb|EES40491.1| SMC superfamily ATP-binding chromosome segregation protein [Staphylococcus epidermidis M23864:W1] Length = 1189 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 86 SIKK 89 ++ Sbjct: 61 KMED 64 >gi|170731184|ref|YP_001776617.1| chromosome segregation protein [Xylella fastidiosa M12] gi|167965977|gb|ACA12987.1| chromosome segregation protein [Xylella fastidiosa M12] Length = 1167 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|28199809|ref|NP_780123.1| chromosome segregation protein [Xylella fastidiosa Temecula1] gi|182682561|ref|YP_001830721.1| chromosome segregation protein SMC [Xylella fastidiosa M23] gi|28057930|gb|AAO29772.1| chromosome segregation protein [Xylella fastidiosa Temecula1] gi|182632671|gb|ACB93447.1| chromosome segregation protein SMC [Xylella fastidiosa M23] gi|307578841|gb|ADN62810.1| chromosome segregation protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 1167 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|71898273|ref|ZP_00680447.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] gi|71732012|gb|EAO34069.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] Length = 1167 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|71899831|ref|ZP_00681981.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] gi|71730422|gb|EAO32503.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Ann-1] Length = 1167 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|71275193|ref|ZP_00651480.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Dixon] gi|71164002|gb|EAO13717.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Xylella fastidiosa Dixon] Length = 1167 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + ++T + G NG GKS++ +A+ W+ + R GDS Sbjct: 1 MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 LTDVIFSGSSARKPVAQA 78 >gi|319649603|ref|ZP_08003759.1| smc protein [Bacillus sp. 2_A_57_CT2] gi|317398765|gb|EFV79447.1| smc protein [Bacillus sp. 2_A_57_CT2] Length = 1188 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F E ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFAERITVDFVPGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + A Sbjct: 61 MEDVIFAGSDSRRAQNFA 78 >gi|224476346|ref|YP_002633952.1| putative chromosome segregation protein SMC [Staphylococcus carnosus subsp. carnosus TM300] gi|222420953|emb|CAL27767.1| putative chromosome segregation protein SMC [Staphylococcus carnosus subsp. carnosus TM300] Length = 1189 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I F+ F E ++ F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSINAFGFKSFAEQTEVNFDQGVTAIVGPNGSGKSNVTDAIKWVLGEQSAKSLRGS 60 Query: 86 SI---KKRSIKTPMPMCMAVPRCK 106 + + A R K Sbjct: 61 KMEDIIFSGAEHRKAQNYAEVRLK 84 >gi|329724312|gb|EGG60824.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU144] Length = 1189 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L I+ F+ F + ++F +T + G NG GKS++++AI+W+ + + G Sbjct: 1 MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGA 60 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 + I + A + K Sbjct: 61 KMEDIIFSGAEHRKAQNFAEVKLK 84 >gi|293364020|ref|ZP_06610756.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] gi|292552510|gb|EFF41284.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] Length = 981 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ IE F+ F + + F +T + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKIEAHGFKSFADPVTLHFDGGVTGIVGPNGSGKSNINDAIKWVLGEQSSKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT + A Sbjct: 61 MADVIFAGSKTTKSLDRA 78 >gi|157692274|ref|YP_001486736.1| chromosome segregation protein Smc [Bacillus pumilus SAFR-032] gi|157681032|gb|ABV62176.1| chromosome segregation protein Smc [Bacillus pumilus SAFR-032] Length = 1186 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +++ F+ F + ++F +T V G NG GKS++++AI W+ + + G Sbjct: 1 MFLKRLDVIGFKSFAQRVTVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSAKSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + + +A Sbjct: 61 MEDIIFAGSDSRKRVNLA 78 >gi|150390511|ref|YP_001320560.1| chromosome segregation protein SMC [Alkaliphilus metalliredigens QYMF] gi|149950373|gb|ABR48901.1| chromosome segregation protein SMC [Alkaliphilus metalliredigens QYMF] Length = 1194 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F ++ F T V G NG GKS++S++I W+ + + G Sbjct: 1 MYLKRLEIQGFKSFANKIEMNFEQGFTAVVGPNGSGKSNISDSIRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|332969955|gb|EGK08955.1| SMC structural maintenance of chromosomes partitioning protein [Kingella kingae ATCC 23330] Length = 1181 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L+ +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G Sbjct: 18 LLMRLTQIKLAGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRG 77 Query: 85 DSIK---KRSIKTPMPMCMAVPRCKYQL 109 +S++ T P PR +L Sbjct: 78 ESMQDVIFNGAATRRP----APRASVEL 101 >gi|28210932|ref|NP_781876.1| chromosome segregation protein smc2 [Clostridium tetani E88] gi|28203371|gb|AAO35813.1| chromosome segregation protein smc2 [Clostridium tetani E88] Length = 1186 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F +I F +T + G NG GKS++S+AI W+ + + G Sbjct: 1 MFLKSLEIRGFKSFANKTEINFQKGITAIVGPNGSGKSNISDAIRWVLGEQSIKNLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQFRKPVGLA 78 >gi|310658887|ref|YP_003936608.1| chromosome condensation and segregation smc ATPase [Clostridium sticklandii DSM 519] gi|308825665|emb|CBH21703.1| chromosome condensation and segregation SMC ATPase [Clostridium sticklandii] Length = 1177 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +EI F+ F + +I F L V G NG GKS++ +AI W+ + + GD Sbjct: 1 MYLKKMEIKGFKSFPDKTEILFPHGLISVVGPNGSGKSNILDAIRWVLGEQSMKSLRGDK 60 Query: 86 --SIKKRSIKTPMPMC 99 + + M Sbjct: 61 LEDVIFSGTEKRKEMN 76 >gi|239616597|ref|YP_002939919.1| chromosome segregation protein SMC [Kosmotoga olearia TBF 19.5.1] gi|239505428|gb|ACR78915.1| chromosome segregation protein SMC [Kosmotoga olearia TBF 19.5.1] Length = 1173 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ I I F+ F KI+ + +T + G NG GKS++ +AI W+F + + D+ Sbjct: 1 MRLVSIFIKGFKSFAYPTKIDISKGITAIVGPNGSGKSNIVDAIRWVFGEQSMKTIRADN 60 Query: 87 ---IKKRSIKTPMPMCMAVPRCKYQ 108 + + P AV + ++ Sbjct: 61 REDVIFAGSEKNPPANSAVVKLTFE 85 >gi|330889910|gb|EGH22571.1| chromosome segregation protein SMC [Pseudomonas syringae pv. mori str. 301020] Length = 119 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|237795888|ref|YP_002863440.1| chromosome segregation protein SMC [Clostridium botulinum Ba4 str. 657] gi|229263914|gb|ACQ54947.1| chromosome segregation protein SMC [Clostridium botulinum Ba4 str. 657] Length = 1193 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEVRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|119476277|ref|ZP_01616628.1| hypothetical protein GP2143_07499 [marine gamma proteobacterium HTCC2143] gi|119450141|gb|EAW31376.1| hypothetical protein GP2143_07499 [marine gamma proteobacterium HTCC2143] Length = 1168 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G++ Sbjct: 1 MRLKTIKLAGFKSFVDPTNVSFPSNLGCVVGPNGCGKSNIIDAVRWVMGESSAKNLRGEN 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|325274413|ref|ZP_08140500.1| chromosome segregation protein SMC [Pseudomonas sp. TJI-51] gi|324100448|gb|EGB98207.1| chromosome segregation protein SMC [Pseudomonas sp. TJI-51] Length = 1162 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSGRKPVSQA 78 >gi|313497883|gb|ADR59249.1| Chromosome segregation protein SMC [Pseudomonas putida BIRD-1] Length = 1162 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSGRKPVSQA 78 >gi|313888471|ref|ZP_07822138.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845500|gb|EFR32894.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 1173 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F KIE + T + G NG GKS++++AI W+ + + G Sbjct: 1 MFLKSVTMQGFKSFANRTKIELDETTTAIVGPNGSGKSNITDAITWVLGESSAKNLRGSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ MA Sbjct: 61 MEDVIFSGTDSKKPLGMA 78 >gi|167034835|ref|YP_001670066.1| chromosome segregation protein SMC [Pseudomonas putida GB-1] gi|166861323|gb|ABY99730.1| chromosome segregation protein SMC [Pseudomonas putida GB-1] Length = 1162 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSGRKPVSQA 78 >gi|26990967|ref|NP_746392.1| chromosome segregation protein SMC [Pseudomonas putida KT2440] gi|24985991|gb|AAN69856.1|AE016624_7 chromosome segregation SMC protein [Pseudomonas putida KT2440] Length = 1162 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSGRKPVSQA 78 >gi|148546830|ref|YP_001266932.1| chromosome segregation protein SMC [Pseudomonas putida F1] gi|148510888|gb|ABQ77748.1| condensin subunit Smc [Pseudomonas putida F1] Length = 1162 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSGRKPVSQA 78 >gi|187778955|ref|ZP_02995428.1| hypothetical protein CLOSPO_02550 [Clostridium sporogenes ATCC 15579] gi|187772580|gb|EDU36382.1| hypothetical protein CLOSPO_02550 [Clostridium sporogenes ATCC 15579] Length = 1193 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A++W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTELMFKQGVTAIVGPNGSGKSNISDAVKWVLGEQSVKSLRGSK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|260887877|ref|ZP_05899140.1| putative cell division protein Smc [Selenomonas sputigena ATCC 35185] gi|330838742|ref|YP_004413322.1| chromosome segregation protein SMC [Selenomonas sputigena ATCC 35185] gi|260862383|gb|EEX76883.1| putative cell division protein Smc [Selenomonas sputigena ATCC 35185] gi|329746506|gb|AEB99862.1| chromosome segregation protein SMC [Selenomonas sputigena ATCC 35185] Length = 1181 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F + +IEF +T + G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFADKIEIEFHAGVTAIVGPNGSGKSNVTDAVRWVLGEQNVRALRGSK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I T M +A Sbjct: 61 AEDIIFTGSATRRAMGVA 78 >gi|221194733|ref|ZP_03567790.1| chromosome segregation protein SMC [Atopobium rimae ATCC 49626] gi|221185637|gb|EEE18027.1| chromosome segregation protein SMC [Atopobium rimae ATCC 49626] Length = 1182 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + F LT+V G NG GKS++S+AI W+ + + G + Sbjct: 1 MYLKALTLKGFKSFADKTHMVFDPGLTVVVGPNGSGKSNVSDAILWVLGEQSAKMLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|253681396|ref|ZP_04862193.1| chromosome segregation protein SMC [Clostridium botulinum D str. 1873] gi|253561108|gb|EES90560.1| chromosome segregation protein SMC [Clostridium botulinum D str. 1873] Length = 1184 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++ F + +T + G NG GKS++ +A++W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELVFKEGITAIVGPNGSGKSNILDAVKWVLGEQSIKNLRGGK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ +A Sbjct: 61 MQDVIFSGTEFRKPVGLA 78 >gi|288941061|ref|YP_003443301.1| chromosome segregation protein SMC [Allochromatium vinosum DSM 180] gi|288896433|gb|ADC62269.1| chromosome segregation protein SMC [Allochromatium vinosum DSM 180] Length = 1170 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L + G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLERIKLAGFKSFVDPTTVHFPSNLVGIVGPNGCGKSNVIDAVRWVMGESSAKMLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|296121423|ref|YP_003629201.1| chromosome segregation protein SMC [Planctomyces limnophilus DSM 3776] gi|296013763|gb|ADG67002.1| chromosome segregation protein SMC [Planctomyces limnophilus DSM 3776] Length = 1255 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 33/61 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + + +FA +T V G NG GKS++ +A++W+ + + G + Sbjct: 2 LKALELFGFKSFADRTRFDFASGITSVVGPNGSGKSNVVDALKWILGDQSAKSLRGKEMT 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|260889921|ref|ZP_05901184.1| cell division protein Smc [Leptotrichia hofstadii F0254] gi|260860527|gb|EEX75027.1| cell division protein Smc [Leptotrichia hofstadii F0254] Length = 183 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +E++ F+ F +EF + +T + G NG GKS++ +AI W+ + + Sbjct: 1 MYLKALELTGFKSFANRTVVEFDNGITSIVGPNGSGKSNILDAILWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 I K P MA Sbjct: 61 SSDIIFSGGKNKKPKSMA 78 >gi|187250824|ref|YP_001875306.1| chromosome segregation ATPase [Elusimicrobium minutum Pei191] gi|186970984|gb|ACC97969.1| Chromosome segregation ATPase [Elusimicrobium minutum Pei191] Length = 1148 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + Q+++F +T V G NG GKS++ +++ W + + S Sbjct: 1 MYLKAIEIIGFKSFADRQRLDFEKGITCVVGPNGCGKSNVVDSVRWAIGEMSWKSLRSAS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MIDIIFNGTARRSPLNLA 78 >gi|261368257|ref|ZP_05981140.1| SMC family protein [Subdoligranulum variabile DSM 15176] gi|282569772|gb|EFB75307.1| SMC family protein [Subdoligranulum variabile DSM 15176] Length = 1185 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L ++EI F+ F + KI + +T V G NG GKS++S++I W+ + ++ G Sbjct: 1 MRLKELEIQGFKSFPDRTKITIGNGITGVVGPNGSGKSNISDSIRWVLGETSSKQLRGSG 60 Query: 85 --DSIKKRSIKTPMPMCMA 101 + + +T M A Sbjct: 61 KMEDVIFGGTQTRGAMGYA 79 >gi|331269657|ref|YP_004396149.1| chromosome segregation protein SMC [Clostridium botulinum BKT015925] gi|329126207|gb|AEB76152.1| chromosome segregation protein SMC [Clostridium botulinum BKT015925] Length = 1184 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVLGEQSIKNLRGGK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ +A Sbjct: 61 MQDVIFSGTEFRKPVGLA 78 >gi|330982947|gb|EGH81050.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 171 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|168333988|ref|ZP_02692212.1| chromosome segregation protein SMC [Epulopiscium sp. 'N.t. morphotype B'] Length = 1183 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI F+ F + KI +T + G NG GKS++++AI W+ + + G Sbjct: 1 MYLEKIEIFGFKSFGDAVKIAVPSGITAIIGPNGSGKSNVADAIRWVLGEQSAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T PM A Sbjct: 61 MEDVIFVGTETRKPMGYA 78 >gi|192359535|ref|YP_001982385.1| chromosome segregation protein SMC [Cellvibrio japonicus Ueda107] gi|190685700|gb|ACE83378.1| chromosome segregation protein SMC [Cellvibrio japonicus Ueda107] Length = 1169 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G++ Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGEN 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|269215206|ref|ZP_06159110.1| putative RecF/RecN/SMC N domain protein [Neisseria lactamica ATCC 23970] gi|269208054|gb|EEZ74509.1| putative RecF/RecN/SMC N domain protein [Neisseria lactamica ATCC 23970] Length = 852 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+ Sbjct: 31 IMRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGE 90 Query: 86 SIK---KRSIKTPMPMCMAVPRCKYQL 109 S++ T P PR +L Sbjct: 91 SMQDVIFNGAATRRP----APRASVEL 113 >gi|189485594|ref|YP_001956535.1| chromosome segregation protein SMC [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287553|dbj|BAG14074.1| chromosome segregation protein SMC [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 1155 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + ++F ++ + G NG GKS++S++I W + + Sbjct: 1 MHLKKVEVCGFKSFADRTVLDFEPGISGIVGPNGCGKSNISDSIRWCLGEQKAKSMRSSN 60 Query: 87 IKK 89 +++ Sbjct: 61 MQE 63 >gi|296270736|ref|YP_003653368.1| chromosome segregation protein SMC [Thermobispora bispora DSM 43833] gi|296093523|gb|ADG89475.1| chromosome segregation protein SMC [Thermobispora bispora DSM 43833] Length = 1234 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MYLKKLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALAWVMGEHSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|330830680|ref|YP_004393632.1| chromosome segregation protein SMC [Aeromonas veronii B565] gi|328805816|gb|AEB51015.1| Chromosome segregation protein SMC [Aeromonas veronii B565] Length = 1124 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E +IE + +T V G NG GKS++ +A+ W+ + R G++ Sbjct: 1 MRLKLIKLAGFKSFVEPTRIELSADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGEN 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|298252087|ref|ZP_06975890.1| chromosome segregation protein SMC [Ktedonobacter racemifer DSM 44963] gi|297546679|gb|EFH80547.1| chromosome segregation protein SMC [Ktedonobacter racemifer DSM 44963] Length = 1258 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F +EF+ +T V G NG GKS++++A+ W+ R+ G Sbjct: 1 MYLKRLEMLGFKSFASRTVLEFSPGITAVVGPNGSGKSNVADAMRWVLGEQNMRQLRGKK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D I + + MA Sbjct: 61 SDDIIFVGGQGKAALGMA 78 >gi|117928777|ref|YP_873328.1| condensin subunit Smc [Acidothermus cellulolyticus 11B] gi|117649240|gb|ABK53342.1| condensin subunit Smc [Acidothermus cellulolyticus 11B] Length = 1188 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLRGFKSFASTTTLRFEPGITCVVGPNGSGKSNIVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|313674195|ref|YP_004052191.1| chromosome segregation protein smc [Marivirga tractuosa DSM 4126] gi|312940893|gb|ADR20083.1| chromosome segregation protein SMC [Marivirga tractuosa DSM 4126] Length = 1182 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + I F +T + G NG GKS++ +AI W+ R D Sbjct: 1 MQLTKLEIKGFKSFGDRMVINFDKGITGIVGPNGCGKSNVVDAIRWVLGEQKSRMLRSDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K +A Sbjct: 61 MENVIFNGTKKRKQSNLA 78 >gi|126434521|ref|YP_001070212.1| condensin subunit Smc [Mycobacterium sp. JLS] gi|126234321|gb|ABN97721.1| condensin subunit Smc [Mycobacterium sp. JLS] Length = 1195 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MHLKSLTLKGFKSFAAPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEHSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|108798921|ref|YP_639118.1| condensin subunit Smc [Mycobacterium sp. MCS] gi|119868036|ref|YP_937988.1| condensin subunit Smc [Mycobacterium sp. KMS] gi|108769340|gb|ABG08062.1| condensin subunit Smc [Mycobacterium sp. MCS] gi|119694125|gb|ABL91198.1| condensin subunit Smc [Mycobacterium sp. KMS] Length = 1195 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MHLKSLTLKGFKSFAAPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEHSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|15827858|ref|NP_302121.1| cell division protein [Mycobacterium leprae TN] gi|221230335|ref|YP_002503751.1| putative cell division protein [Mycobacterium leprae Br4923] gi|18202761|sp|Q9CBT5|SMC_MYCLE RecName: Full=Chromosome partition protein smc gi|13093410|emb|CAC30580.1| possible cell division protein [Mycobacterium leprae] gi|219933442|emb|CAR71724.1| possible cell division protein [Mycobacterium leprae Br4923] Length = 1203 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|50955123|ref|YP_062411.1| chromosome segregation protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951605|gb|AAT89306.1| chromosome segregation protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 1181 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAQPTTFAFEPGVTCVIGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T P+ A Sbjct: 61 MEDVIFAGTETRGPLGRA 78 >gi|311063985|ref|YP_003970710.1| chromosome partition protein [Bifidobacterium bifidum PRL2010] gi|310866304|gb|ADP35673.1| Smc Chromosome partition protein [Bifidobacterium bifidum PRL2010] Length = 1220 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|310287121|ref|YP_003938379.1| chromosome segregation protein SMC [Bifidobacterium bifidum S17] gi|309251057|gb|ADO52805.1| chromosome segregation protein SMC [Bifidobacterium bifidum S17] Length = 1220 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|296454399|ref|YP_003661542.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. longum JDM301] gi|296183830|gb|ADH00712.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. longum JDM301] Length = 1225 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291457652|ref|ZP_06597042.1| Smc protein [Bifidobacterium breve DSM 20213] gi|291380705|gb|EFE88223.1| Smc protein [Bifidobacterium breve DSM 20213] Length = 1215 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|224282661|ref|ZP_03645983.1| Chromosome segregation ATPase [Bifidobacterium bifidum NCIMB 41171] gi|313139819|ref|ZP_07802012.1| chromosome segregation ATPase [Bifidobacterium bifidum NCIMB 41171] gi|313132329|gb|EFR49946.1| chromosome segregation ATPase [Bifidobacterium bifidum NCIMB 41171] Length = 1220 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|213691783|ref|YP_002322369.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523244|gb|ACJ51991.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457876|dbj|BAJ68497.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 1225 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|23465915|ref|NP_696518.1| chromosome partitioning protein Smc [Bifidobacterium longum NCC2705] gi|23326623|gb|AAN25154.1| chromosome partitioning protein Smc [Bifidobacterium longum NCC2705] Length = 1225 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|41409088|ref|NP_961924.1| hypothetical protein MAP2990c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397447|gb|AAS05307.1| Smc [Mycobacterium avium subsp. paratuberculosis K-10] Length = 1236 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 39 LAVYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRG 98 Query: 85 DSIKK 89 ++ Sbjct: 99 GKMED 103 >gi|330973311|gb|EGH73377.1| chromosome segregation protein SMC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 1162 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVAPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|149924994|ref|ZP_01913318.1| Chromosome segregation protein SMC [Plesiocystis pacifica SIR-1] gi|149814141|gb|EDM73760.1| Chromosome segregation protein SMC [Plesiocystis pacifica SIR-1] Length = 651 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ IE+ F+ F + + + DH+T V G NG GKS++ +AI W + G Sbjct: 1 MRIKKIEVIGFKSFADREVVVLDDHVTAVIGPNGCGKSNIVDAIRWCLGEQRAKHLRGGG 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P MA Sbjct: 61 MADVIFAGSSTRGPAGMA 78 >gi|187933092|ref|YP_001885440.1| chromosome segregation protein SMC [Clostridium botulinum B str. Eklund 17B] gi|187721245|gb|ACD22466.1| chromosome segregation protein SMC [Clostridium botulinum B str. Eklund 17B] Length = 1185 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVLGEQSVKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFSGTQYRKPVGLA 78 >gi|117619753|ref|YP_855768.1| chromosome segregation protein SMC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561160|gb|ABK38108.1| chromosome segregation protein SMC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1124 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E +IE +T V G NG GKS++ +A+ W+ + R G++ Sbjct: 1 MRLKLIKLAGFKSFVEPTRIELNADMTAVVGPNGCGKSNVIDAVRWVLGESSARHLRGEN 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|271969192|ref|YP_003343388.1| chromosome segregation SMc protein [Streptosporangium roseum DSM 43021] gi|270512367|gb|ACZ90645.1| chromosome segregation SMC protein [Streptosporangium roseum DSM 43021] Length = 1227 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MYLKTLTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEHSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|78188397|ref|YP_378735.1| chromosome segregation protein SMC [Chlorobium chlorochromatii CaD3] gi|78170596|gb|ABB27692.1| Chromosome segregation protein SMC [Chlorobium chlorochromatii CaD3] Length = 1190 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F + +I F LT + G NG GK+++ +A+ W+ Sbjct: 1 MYLAKIELLGFKSFAQKVRIRFDKGLTAIVGPNGCGKTNVVDAMRWVLGEQKSSLLRSAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 ++I +T P+ MA Sbjct: 61 MENIIFNGTRTLKPLSMA 78 >gi|162450015|ref|YP_001612382.1| hypothetical protein sce1744 [Sorangium cellulosum 'So ce 56'] gi|161160597|emb|CAN91902.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 1201 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +EIS F+ F + + F + + G NG GKS++ +AI W + + G S Sbjct: 1 MRIRKLEISGFKSFVDRTVVHFDTDVVGIVGPNGCGKSNIVDAIRWAIGEQSAKHLRGKS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + +T MA Sbjct: 61 MSDVIFNGSETRAQHGMA 78 >gi|289679590|ref|ZP_06500480.1| chromosome segregation protein SMC [Pseudomonas syringae pv. syringae FF5] Length = 64 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|328955641|ref|YP_004372974.1| condensin subunit Smc [Coriobacterium glomerans PW2] gi|328455965|gb|AEB07159.1| condensin subunit Smc [Coriobacterium glomerans PW2] Length = 1179 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + F L ++ G NG GKS++S+AI W+ + R+ G + Sbjct: 1 MYLKSLTLKGFKSFADRAHMVFEPGLAVIVGPNGSGKSNISDAILWVLGEQSARQLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|20807912|ref|NP_623083.1| chromosome segregation ATPase [Thermoanaerobacter tengcongensis MB4] gi|20516479|gb|AAM24687.1| Chromosome segregation ATPases [Thermoanaerobacter tengcongensis MB4] Length = 1189 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELYGFKSFADKVSLNFEKGITAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + +T P+ Sbjct: 61 LEDVIFAGSETRKPL 75 >gi|300741692|ref|ZP_07071713.1| Smc [Rothia dentocariosa M567] gi|300380877|gb|EFJ77439.1| Smc [Rothia dentocariosa M567] Length = 1205 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F EFA + V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLTSLTLRGFKSFASSTTFEFAPGINAVVGPNGSGKSNIMDALAWVMGEQGAKTLRGGS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|311113795|ref|YP_003985017.1| chromosome partition protein SMC [Rothia dentocariosa ATCC 17931] gi|310945289|gb|ADP41583.1| chromosome partition protein SMC [Rothia dentocariosa ATCC 17931] Length = 1205 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F EFA + V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLTSLTLRGFKSFASSTTFEFAPGINAVVGPNGSGKSNIMDALAWVMGEQGAKTLRGGS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|256832209|ref|YP_003160936.1| chromosome segregation protein SMC [Jonesia denitrificans DSM 20603] gi|256685740|gb|ACV08633.1| chromosome segregation protein SMC [Jonesia denitrificans DSM 20603] Length = 1172 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTVRGFKSFASATRFDFEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|262196886|ref|YP_003268095.1| chromosome segregation protein SMC [Haliangium ochraceum DSM 14365] gi|262080233|gb|ACY16202.1| chromosome segregation protein SMC [Haliangium ochraceum DSM 14365] Length = 1403 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++ IEI F+ F + + + +T V G NG GKS++ +AI W + R G Sbjct: 1 MRIKRIEIIGFKSFCDRTVLNISSPVTSVVGPNGCGKSNIVDAIRWSMGEQSARHLRGKA 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + ++ P MA Sbjct: 61 MDDVIFAGSESRGPASMA 78 >gi|254519216|ref|ZP_05131272.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] gi|226912965|gb|EEH98166.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] Length = 1187 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +++F +T V G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTQLKFKKGVTAVVGPNGSGKSNISDSVRWVLGEQSVKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQYRKPVGLA 78 >gi|167040353|ref|YP_001663338.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X514] gi|300914437|ref|ZP_07131753.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X561] gi|307724327|ref|YP_003904078.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X513] gi|166854593|gb|ABY93002.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X514] gi|300889372|gb|EFK84518.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X561] gi|307581388|gb|ADN54787.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X513] Length = 1196 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLNFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|326389506|ref|ZP_08211073.1| chromosome segregation protein SMC [Thermoanaerobacter ethanolicus JW 200] gi|325994511|gb|EGD52936.1| chromosome segregation protein SMC [Thermoanaerobacter ethanolicus JW 200] Length = 1196 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLNFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|323141212|ref|ZP_08076113.1| chromosome segregation protein SMC [Phascolarctobacterium sp. YIT 12067] gi|322414355|gb|EFY05173.1| chromosome segregation protein SMC [Phascolarctobacterium sp. YIT 12067] Length = 1189 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L F+ F + ++ F +T V G NG GKS++S+AI W+ + + G Sbjct: 1 MRLKSFSTYGFKSFADKTELTFDKGITAVVGPNGSGKSNISDAIRWVLGEQSAKYLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|118442990|ref|YP_878289.1| chromosome segregation protein SMC [Clostridium novyi NT] gi|118133446|gb|ABK60490.1| chromosome segregation protein SMC [Clostridium novyi NT] Length = 1185 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVLGEQSVKNLRGGK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ ++ Sbjct: 61 MQDVIFSGTEYRKPVGLS 78 >gi|302380382|ref|ZP_07268852.1| chromosome segregation protein SMC [Finegoldia magna ACS-171-V-Col3] gi|303233781|ref|ZP_07320435.1| chromosome segregation protein SMC [Finegoldia magna BVS033A4] gi|302311872|gb|EFK93883.1| chromosome segregation protein SMC [Finegoldia magna ACS-171-V-Col3] gi|302495215|gb|EFL54967.1| chromosome segregation protein SMC [Finegoldia magna BVS033A4] Length = 1167 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ Sbjct: 1 MGLKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + + A Sbjct: 61 MQDVIFAGTQKEKAVNFA 78 >gi|237668952|ref|ZP_04528936.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] gi|237657300|gb|EEP54856.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1187 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELKFKKGVTAVVGPNGSGKSNISDAVRWVLGEQSIKVLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQFRKPVGLA 78 >gi|182417241|ref|ZP_02948594.1| chromosome segregation protein SMC [Clostridium butyricum 5521] gi|182378887|gb|EDT76400.1| chromosome segregation protein SMC [Clostridium butyricum 5521] Length = 1187 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELKFKKGVTAVVGPNGSGKSNISDAVRWVLGEQSIKVLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQFRKPVGLA 78 >gi|332976627|gb|EGK13468.1| hypothetical protein HMPREF9374_0890 [Desmospora sp. 8437] Length = 530 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ F+ F + ++EF +T V G NG GKS++++ + W+ + + G S Sbjct: 1 MHLKRLDMIGFKSFADRTELEFTPGVTAVVGPNGSGKSNVTDGMRWVLGEQSAKSLRGAS 60 Query: 87 IK---KRSIKTPMPM 98 ++ + P+ Sbjct: 61 MQDVIFSGSDSRKPV 75 >gi|307296240|ref|ZP_07576067.1| chromosome segregation protein SMC [Sphingobium chlorophenolicum L-1] gi|306878042|gb|EFN09265.1| chromosome segregation protein SMC [Sphingobium chlorophenolicum L-1] Length = 1147 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++S F+ F + ++ LT + G NG GKS+L EAI W+ + + G Sbjct: 1 MQIKRLKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294010077|ref|YP_003543537.1| chromosome segregation protein [Sphingobium japonicum UT26S] gi|292673407|dbj|BAI94925.1| chromosome segregation protein [Sphingobium japonicum UT26S] Length = 1147 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++S F+ F + ++ LT + G NG GKS+L EAI W+ + + G Sbjct: 1 MQIKRLKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254785948|ref|YP_003073377.1| chromosome segregation protein SMC [Teredinibacter turnerae T7901] gi|237684299|gb|ACR11563.1| chromosome segregation protein SMC [Teredinibacter turnerae T7901] Length = 1166 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F +L V G NG GKS++ +A+ W+ + + G++ Sbjct: 1 MRLKCIKLAGFKSFVDPTTVTFPSNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGEA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSGSRKPVGQA 78 >gi|325121131|gb|ADY80654.1| putative chromosome segregation ATPase [Acinetobacter calcoaceticus PHEA-2] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|322506975|gb|ADX02429.1| Putative chromosome segregation ATPase [Acinetobacter baumannii 1656-2] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|299771369|ref|YP_003733395.1| chromosome segregation protein SMC [Acinetobacter sp. DR1] gi|298701457|gb|ADI92022.1| chromosome segregation protein SMC [Acinetobacter sp. DR1] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|293609094|ref|ZP_06691397.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829667|gb|EFF88029.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|262280097|ref|ZP_06057882.1| chromosome segregation ATPase [Acinetobacter calcoaceticus RUH2202] gi|262260448|gb|EEY79181.1| chromosome segregation ATPase [Acinetobacter calcoaceticus RUH2202] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|260555697|ref|ZP_05827917.1| chromosome segregation protein SMC [Acinetobacter baumannii ATCC 19606] gi|260410608|gb|EEX03906.1| chromosome segregation protein SMC [Acinetobacter baumannii ATCC 19606] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|260550984|ref|ZP_05825189.1| chromosome segregation protein SMC [Acinetobacter sp. RUH2624] gi|260405932|gb|EEW99419.1| chromosome segregation protein SMC [Acinetobacter sp. RUH2624] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|289578457|ref|YP_003477084.1| chromosome segregation protein SMC [Thermoanaerobacter italicus Ab9] gi|297544733|ref|YP_003677035.1| chromosome segregation protein SMC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528170|gb|ADD02522.1| chromosome segregation protein SMC [Thermoanaerobacter italicus Ab9] gi|296842508|gb|ADH61024.1| chromosome segregation protein SMC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 1196 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLNFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|239501243|ref|ZP_04660553.1| chromosome segregation ATPase [Acinetobacter baumannii AB900] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|193076576|gb|ABO11235.2| putative chromosome segregation ATPase [Acinetobacter baumannii ATCC 17978] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|184157076|ref|YP_001845415.1| chromosome segregation ATPase [Acinetobacter baumannii ACICU] gi|332872652|ref|ZP_08440620.1| segregation protein SMC [Acinetobacter baumannii 6014059] gi|183208670|gb|ACC56068.1| Chromosome segregation ATPase [Acinetobacter baumannii ACICU] gi|323516842|gb|ADX91223.1| chromosome segregation ATPase [Acinetobacter baumannii TCDC-AB0715] gi|332739181|gb|EGJ70040.1| segregation protein SMC [Acinetobacter baumannii 6014059] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|169634134|ref|YP_001707870.1| putative chromosome segregation ATPases [Acinetobacter baumannii SDF] gi|169152926|emb|CAP01967.1| putative chromosome segregation ATPases [Acinetobacter baumannii] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|169797011|ref|YP_001714804.1| putative chromosome segregation ATPases [Acinetobacter baumannii AYE] gi|213156585|ref|YP_002318246.1| chromosome segregation protein SMC [Acinetobacter baumannii AB0057] gi|215484471|ref|YP_002326706.1| chromosome segregation protein SMC [Acinetobacter baumannii AB307-0294] gi|301347732|ref|ZP_07228473.1| chromosome segregation protein SMC [Acinetobacter baumannii AB056] gi|301512480|ref|ZP_07237717.1| chromosome segregation protein SMC [Acinetobacter baumannii AB058] gi|301594388|ref|ZP_07239396.1| chromosome segregation protein SMC [Acinetobacter baumannii AB059] gi|332852099|ref|ZP_08433926.1| segregation protein SMC [Acinetobacter baumannii 6013150] gi|332867497|ref|ZP_08437650.1| segregation protein SMC [Acinetobacter baumannii 6013113] gi|169149938|emb|CAM87832.1| putative chromosome segregation ATPases [Acinetobacter baumannii AYE] gi|213055745|gb|ACJ40647.1| chromosome segregation protein SMC [Acinetobacter baumannii AB0057] gi|213988534|gb|ACJ58833.1| chromosome segregation protein SMC [Acinetobacter baumannii AB307-0294] gi|332729471|gb|EGJ60810.1| segregation protein SMC [Acinetobacter baumannii 6013150] gi|332733914|gb|EGJ65059.1| segregation protein SMC [Acinetobacter baumannii 6013113] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|94496121|ref|ZP_01302699.1| Chromosome segregation protein SMC [Sphingomonas sp. SKA58] gi|94424300|gb|EAT09323.1| Chromosome segregation protein SMC [Sphingomonas sp. SKA58] Length = 1147 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++S F+ F + ++ LT + G NG GKS+L EAI W+ + + G Sbjct: 1 MQIKRLKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|188590228|ref|YP_001920587.1| chromosome segregation protein SMC [Clostridium botulinum E3 str. Alaska E43] gi|188500509|gb|ACD53645.1| chromosome segregation protein SMC [Clostridium botulinum E3 str. Alaska E43] Length = 1185 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVLGEQSVKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQYRKPVGLA 78 >gi|169338111|ref|ZP_02863218.1| chromosome partition protein smc [Clostridium botulinum C str. Eklund] gi|169294129|gb|EDS76262.1| chromosome partition protein smc [Clostridium botulinum C str. Eklund] Length = 377 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++ F +T + G NG GKS++ +A++W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELVFKKGITAIVGPNGSGKSNILDAVKWVLGEQSVKNLRGGK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ +A Sbjct: 61 MQDVIFSGTEYRKPVGLA 78 >gi|311744092|ref|ZP_07717898.1| SMC structural maintenance of chromosomes partitioning protein [Aeromicrobium marinum DSM 15272] gi|311313222|gb|EFQ83133.1| SMC structural maintenance of chromosomes partitioning protein [Aeromicrobium marinum DSM 15272] Length = 1185 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +EF +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLRGFKSFASTTTLEFETGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|50084058|ref|YP_045568.1| putative chromosome segregation ATPase [Acinetobacter sp. ADP1] gi|49530034|emb|CAG67746.1| putative chromosome segregation ATPases [Acinetobacter sp. ADP1] Length = 1149 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLAGFKSFADSATLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQ 108 ++ P+ MA +++ Sbjct: 61 MQDVIFTGTAKRKPVGMASVELRFE 85 >gi|251780518|ref|ZP_04823438.1| chromosome segregation protein SMC [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084833|gb|EES50723.1| chromosome segregation protein SMC [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1185 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + +++F + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLDIRGFKSFADKTELKFNNGVTAVVGPNGSGKSNISDAVRWVLGEQSVKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQYRKPVGLA 78 >gi|169824543|ref|YP_001692154.1| chromosome segregation SMC protein [Finegoldia magna ATCC 29328] gi|167831348|dbj|BAG08264.1| chromosome segregation SMC protein [Finegoldia magna ATCC 29328] Length = 1167 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + K+ F + +T + G NG GKS++S+AI W+ + + G+ Sbjct: 1 MGLKSVEIQGFKSFKDKIKLNFDNPITAIVGPNGSGKSNISDAILWVLGEQSAKNLRGNK 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + + A Sbjct: 61 MQDVIFAGTQKEKAVNFA 78 >gi|296171398|ref|ZP_06852731.1| SMC structural maintenance of chromosomes partitioning protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894173|gb|EFG73932.1| SMC structural maintenance of chromosomes partitioning protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 373 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254822114|ref|ZP_05227115.1| chromosome segregation protein SMC [Mycobacterium intracellulare ATCC 13950] Length = 316 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254776224|ref|ZP_05217740.1| chromosome segregation protein SMC [Mycobacterium avium subsp. avium ATCC 25291] Length = 576 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|118466622|ref|YP_882949.1| chromosome segregation protein SMC [Mycobacterium avium 104] gi|118167909|gb|ABK68806.1| chromosome segregation protein SMC [Mycobacterium avium 104] Length = 1196 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|269127635|ref|YP_003301005.1| chromosome segregation protein SMC [Thermomonospora curvata DSM 43183] gi|268312593|gb|ACY98967.1| chromosome segregation protein SMC [Thermomonospora curvata DSM 43183] Length = 1218 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLRGFKSFASSTTLRFEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|154500960|ref|ZP_02038998.1| hypothetical protein BACCAP_04646 [Bacteroides capillosus ATCC 29799] gi|150269984|gb|EDM97503.1| hypothetical protein BACCAP_04646 [Bacteroides capillosus ATCC 29799] Length = 1192 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + + F + +T + G NG GKS++S+AI W+ + R G Sbjct: 4 LYLKALEIQGFKSFPDKTVLTFGEDVTAIVGPNGSGKSNISDAIRWVMGEQSTRALRGGK 63 Query: 87 IKK 89 ++ Sbjct: 64 MED 66 >gi|18310698|ref|NP_562632.1| chromosome segregation protein SMC [Clostridium perfringens str. 13] gi|18145379|dbj|BAB81422.1| chromosome partition protein [Clostridium perfringens str. 13] Length = 1185 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|88855274|ref|ZP_01129939.1| chromosome segregation protein [marine actinobacterium PHSC20C1] gi|88815802|gb|EAR25659.1| chromosome segregation protein [marine actinobacterium PHSC20C1] Length = 1191 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAQPTTFAFEQGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ A Sbjct: 61 MEDVIFAGTATKGPLGRA 78 >gi|169342728|ref|ZP_02863769.1| chromosome segregation protein SMC [Clostridium perfringens C str. JGS1495] gi|169299234|gb|EDS81304.1| chromosome segregation protein SMC [Clostridium perfringens C str. JGS1495] Length = 1185 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|110803965|ref|YP_699003.1| chromosome segregation protein SMC [Clostridium perfringens SM101] gi|110684466|gb|ABG87836.1| chromosome segregation protein SMC [Clostridium perfringens SM101] Length = 1185 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|150016056|ref|YP_001308310.1| chromosome segregation protein SMC [Clostridium beijerinckii NCIMB 8052] gi|149902521|gb|ABR33354.1| chromosome segregation protein SMC [Clostridium beijerinckii NCIMB 8052] Length = 1185 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +++F +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELKFKQGVTAVVGPNGSGKSNISDAVRWVLGEQSVKVLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ +A Sbjct: 61 MEDVIFAGTQFRKPVGLA 78 >gi|291007123|ref|ZP_06565096.1| chromosome segregation protein SMC [Saccharopolyspora erythraea NRRL 2338] Length = 833 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGEQGAKDLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|134102508|ref|YP_001108169.1| chromosome segregation ATPase [Saccharopolyspora erythraea NRRL 2338] gi|133915131|emb|CAM05244.1| chromosome segregation ATPase [Saccharopolyspora erythraea NRRL 2338] Length = 1312 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGEQGAKDLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|307826051|ref|ZP_07656264.1| chromosome segregation protein SMC [Methylobacter tundripaludum SV96] gi|307732890|gb|EFO03754.1| chromosome segregation protein SMC [Methylobacter tundripaludum SV96] Length = 1196 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I++S F+ F + I + +LT + G NG GKS++ +A+ W+ + + G S Sbjct: 1 MKLEKIKLSGFKSFVDSTVIPISGNLTAIVGPNGCGKSNIIDAVRWVMGESSAKHLRGGS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGSSGRKPVSTA 78 >gi|306781120|ref|ZP_07419457.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu002] gi|308326060|gb|EFP14911.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu002] Length = 542 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294993981|ref|ZP_06799672.1| chromosome partition protein SMC [Mycobacterium tuberculosis 210] Length = 1205 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|289759044|ref|ZP_06518422.1| chromosome partition protein Smc [Mycobacterium tuberculosis T85] gi|289714608|gb|EFD78620.1| chromosome partition protein Smc [Mycobacterium tuberculosis T85] Length = 914 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|289763098|ref|ZP_06522476.1| chromosome partitioning protein smc [Mycobacterium tuberculosis GM 1503] gi|289710604|gb|EFD74620.1| chromosome partitioning protein smc [Mycobacterium tuberculosis GM 1503] Length = 883 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|260206241|ref|ZP_05773732.1| putative chromosome partition protein [Mycobacterium tuberculosis K85] gi|289575627|ref|ZP_06455854.1| chromosome partition protein smc [Mycobacterium tuberculosis K85] gi|289540058|gb|EFD44636.1| chromosome partition protein smc [Mycobacterium tuberculosis K85] Length = 1205 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|215428366|ref|ZP_03426285.1| chromosome partition protein Smc [Mycobacterium tuberculosis T92] gi|289751590|ref|ZP_06510968.1| chromosome partition protein Smc [Mycobacterium tuberculosis T92] gi|289692177|gb|EFD59606.1| chromosome partition protein Smc [Mycobacterium tuberculosis T92] Length = 124 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|183981798|ref|YP_001850089.1| chromosome partition protein Smc [Mycobacterium marinum M] gi|183175124|gb|ACC40234.1| chromosome partition protein Smc [Mycobacterium marinum M] Length = 1200 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|168217003|ref|ZP_02642628.1| chromosome segregation protein SMC [Clostridium perfringens NCTC 8239] gi|182380903|gb|EDT78382.1| chromosome segregation protein SMC [Clostridium perfringens NCTC 8239] Length = 1185 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|168214193|ref|ZP_02639818.1| chromosome segregation protein SMC [Clostridium perfringens CPE str. F4969] gi|170714289|gb|EDT26471.1| chromosome segregation protein SMC [Clostridium perfringens CPE str. F4969] Length = 1185 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|118617609|ref|YP_905941.1| chromosome partition protein Smc [Mycobacterium ulcerans Agy99] gi|118569719|gb|ABL04470.1| chromosome partition protein Smc [Mycobacterium ulcerans Agy99] Length = 1200 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|31794098|ref|NP_856591.1| chromosome partition protein Smc [Mycobacterium bovis AF2122/97] gi|121638803|ref|YP_979027.1| putative chromosome partition protein smc [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991295|ref|YP_002645984.1| putative chromosome partition protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31619693|emb|CAD96633.1| PROBABLE CHROMOSOME PARTITION PROTEIN SMC [Mycobacterium bovis AF2122/97] gi|121494451|emb|CAL72932.1| Probable chromosome partition protein smc [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774410|dbj|BAH27216.1| putative chromosome partition protein [Mycobacterium bovis BCG str. Tokyo 172] Length = 1205 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|148824111|ref|YP_001288865.1| chromosome partitioning protein smc [Mycobacterium tuberculosis F11] gi|253797990|ref|YP_003030991.1| chromosome partition protein smc [Mycobacterium tuberculosis KZN 1435] gi|254551995|ref|ZP_05142442.1| chromosome partition protein smc [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289553289|ref|ZP_06442499.1| chromosome partition protein smc [Mycobacterium tuberculosis KZN 605] gi|297635541|ref|ZP_06953321.1| chromosome partition protein SMC [Mycobacterium tuberculosis KZN 4207] gi|297732540|ref|ZP_06961658.1| chromosome partition protein SMC [Mycobacterium tuberculosis KZN R506] gi|313659872|ref|ZP_07816752.1| chromosome partition protein SMC [Mycobacterium tuberculosis KZN V2475] gi|148722638|gb|ABR07263.1| chromosome partitioning protein smc [Mycobacterium tuberculosis F11] gi|253319493|gb|ACT24096.1| chromosome partition protein smc [Mycobacterium tuberculosis KZN 1435] gi|289437921|gb|EFD20414.1| chromosome partition protein smc [Mycobacterium tuberculosis KZN 605] gi|328457764|gb|AEB03187.1| chromosome partition protein smc [Mycobacterium tuberculosis KZN 4207] Length = 1205 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|15842466|ref|NP_337503.1| chromosome segregation SMC protein, putative [Mycobacterium tuberculosis CDC1551] gi|57117036|ref|NP_217438.2| chromosome partition protein Smc [Mycobacterium tuberculosis H37Rv] gi|148662766|ref|YP_001284289.1| putative chromosome segregation SMC protein [Mycobacterium tuberculosis H37Ra] gi|215404897|ref|ZP_03417078.1| putative chromosome partition protein smc [Mycobacterium tuberculosis 02_1987] gi|215412764|ref|ZP_03421476.1| putative chromosome partition protein smc [Mycobacterium tuberculosis 94_M4241A] gi|215431869|ref|ZP_03429788.1| putative chromosome partition protein smc [Mycobacterium tuberculosis EAS054] gi|254233012|ref|ZP_04926339.1| chromosome partition protein smc [Mycobacterium tuberculosis C] gi|260187941|ref|ZP_05765415.1| putative chromosome partition protein [Mycobacterium tuberculosis CPHL_A] gi|260202057|ref|ZP_05769548.1| putative chromosome partition protein [Mycobacterium tuberculosis T46] gi|289444477|ref|ZP_06434221.1| chromosome segregation protein SMC [Mycobacterium tuberculosis T46] gi|289448587|ref|ZP_06438331.1| chromosome partition protein smc [Mycobacterium tuberculosis CPHL_A] gi|289746721|ref|ZP_06506099.1| chromosome partition protein smc [Mycobacterium tuberculosis 02_1987] gi|289755035|ref|ZP_06514413.1| chromosome partition protein Smc [Mycobacterium tuberculosis EAS054] gi|298526391|ref|ZP_07013800.1| SMC protein [Mycobacterium tuberculosis 94_M4241A] gi|306777212|ref|ZP_07415549.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu001] gi|306785758|ref|ZP_07424080.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu003] gi|306789798|ref|ZP_07428120.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu004] gi|306794611|ref|ZP_07432913.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu005] gi|306798855|ref|ZP_07437157.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu006] gi|306804700|ref|ZP_07441368.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu008] gi|306808893|ref|ZP_07445561.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu007] gi|306968992|ref|ZP_07481653.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu009] gi|306973329|ref|ZP_07485990.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu010] gi|307081035|ref|ZP_07490205.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu011] gi|17380300|sp|Q10970|SMC_MYCTU RecName: Full=Chromosome partition protein smc gi|13882771|gb|AAK47317.1| chromosome segregation SMC protein, putative [Mycobacterium tuberculosis CDC1551] gi|16030075|emb|CAC93884.1| SMC protein [Mycobacterium tuberculosis H37Rv] gi|41352765|emb|CAA98982.2| PROBABLE CHROMOSOME PARTITION PROTEIN SMC [Mycobacterium tuberculosis H37Rv] gi|124602071|gb|EAY61081.1| chromosome partition protein smc [Mycobacterium tuberculosis C] gi|148506918|gb|ABQ74727.1| putative chromosome segregation SMC protein [Mycobacterium tuberculosis H37Ra] gi|289417396|gb|EFD14636.1| chromosome segregation protein SMC [Mycobacterium tuberculosis T46] gi|289421545|gb|EFD18746.1| chromosome partition protein smc [Mycobacterium tuberculosis CPHL_A] gi|289687249|gb|EFD54737.1| chromosome partition protein smc [Mycobacterium tuberculosis 02_1987] gi|289695622|gb|EFD63051.1| chromosome partition protein Smc [Mycobacterium tuberculosis EAS054] gi|298496185|gb|EFI31479.1| SMC protein [Mycobacterium tuberculosis 94_M4241A] gi|308214421|gb|EFO73820.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu001] gi|308329538|gb|EFP18389.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu003] gi|308333731|gb|EFP22582.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu004] gi|308337088|gb|EFP25939.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu005] gi|308340900|gb|EFP29751.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu006] gi|308344737|gb|EFP33588.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu007] gi|308348717|gb|EFP37568.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu008] gi|308353413|gb|EFP42264.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu009] gi|308357232|gb|EFP46083.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu010] gi|308361241|gb|EFP50092.1| chromosome partition protein smc [Mycobacterium tuberculosis SUMu011] gi|323718533|gb|EGB27704.1| chromosome partition protein smc [Mycobacterium tuberculosis CDC1551A] gi|326904536|gb|EGE51469.1| chromosome partition protein smc [Mycobacterium tuberculosis W-148] Length = 1205 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|193213727|ref|YP_001994926.1| chromosome segregation protein SMC [Chloroherpeton thalassium ATCC 35110] gi|193087204|gb|ACF12479.1| chromosome segregation protein SMC [Chloroherpeton thalassium ATCC 35110] Length = 1187 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + +++F LT + G NG GK+++ +AI W+ D Sbjct: 1 MYLSKLELFGFKSFAQRVQVKFDSGLTAIVGPNGCGKTNIVDAIRWVLGEQKTSVLRSDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P+ M+ Sbjct: 61 MENVIFNGTKNRRPLGMS 78 >gi|168210651|ref|ZP_02636276.1| chromosome segregation protein SMC [Clostridium perfringens B str. ATCC 3626] gi|170711287|gb|EDT23469.1| chromosome segregation protein SMC [Clostridium perfringens B str. ATCC 3626] Length = 1185 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|325266560|ref|ZP_08133237.1| SMC structural maintenance of chromosomes partitioning protein [Kingella denitrificans ATCC 33394] gi|324982003|gb|EGC17638.1| SMC structural maintenance of chromosomes partitioning protein [Kingella denitrificans ATCC 33394] Length = 1166 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTQIKLTGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|294506894|ref|YP_003570952.1| Chromosome segregation protein SMC [Salinibacter ruber M8] gi|294343222|emb|CBH24000.1| Chromosome segregation protein SMC [Salinibacter ruber M8] Length = 1186 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + + F +T + G NG GKS++ +AI W+ + Sbjct: 1 MYLSKLELQGFKSFADETTLTFDPGVTTIVGPNGCGKSNIVDAIRWVIGEQRPTVLRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MENLIFNGTADRRPLGMA 78 >gi|83814851|ref|YP_445024.1| chromosome segregation protein SMC [Salinibacter ruber DSM 13855] gi|83756245|gb|ABC44358.1| chromosome segregation protein SMC [Salinibacter ruber DSM 13855] Length = 1186 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + + F +T + G NG GKS++ +AI W+ + Sbjct: 1 MYLSKLELQGFKSFADETTLTFDPGVTTIVGPNGCGKSNIVDAIRWVIGEQRPTVLRSEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MENLIFNGTADRRPLGMA 78 >gi|110800938|ref|YP_696403.1| chromosome segregation protein SMC [Clostridium perfringens ATCC 13124] gi|110675585|gb|ABG84572.1| chromosome segregation protein SMC [Clostridium perfringens ATCC 13124] Length = 1185 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|110004292|emb|CAK98630.1| hypothetical chromosome segregation smc protein [Spiroplasma citri] Length = 988 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E F+ F + + F + + G NG GKS++++AI W + + G+ Sbjct: 1 MLFLKKLEAFGFKSFADPLTVNFDHEMIGIVGPNGSGKSNINDAIRWCLGEQSIKSLRGN 60 Query: 86 S---IKKRSIKTPMPMCMA 101 + + +T + MA Sbjct: 61 NSEDVIFNGSETKQALNMA 79 >gi|312898599|ref|ZP_07757989.1| segregation protein SMC [Megasphaera micronuciformis F0359] gi|310620518|gb|EFQ04088.1| segregation protein SMC [Megasphaera micronuciformis F0359] Length = 1180 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---DSIK 88 +E+ F+ F + + F +T + G NG GKS++S+A+ W+ R+ G + I Sbjct: 1 MELRGFKSFADKTTLTFDKGITAIVGPNGSGKSNISDAVRWVMGEQNVRQLRGQRAEDII 60 Query: 89 KRSIKTPMPMCMA 101 T P +A Sbjct: 61 FSGTDTRRPQGVA 73 >gi|182625841|ref|ZP_02953607.1| chromosome segregation protein SMC [Clostridium perfringens D str. JGS1721] gi|177908875|gb|EDT71367.1| chromosome segregation protein SMC [Clostridium perfringens D str. JGS1721] Length = 1185 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|322689473|ref|YP_004209207.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. infantis 157F] gi|320460809|dbj|BAJ71429.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. infantis 157F] Length = 1221 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|312132519|ref|YP_003999858.1| smc [Bifidobacterium longum subsp. longum BBMN68] gi|311773453|gb|ADQ02941.1| Smc [Bifidobacterium longum subsp. longum BBMN68] Length = 1225 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291516692|emb|CBK70308.1| condensin subunit Smc [Bifidobacterium longum subsp. longum F8] Length = 1225 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|23335416|ref|ZP_00120652.1| COG1196: Chromosome segregation ATPases [Bifidobacterium longum DJO10A] gi|189439082|ref|YP_001954163.1| chromosome segregation ATPase [Bifidobacterium longum DJO10A] gi|189427517|gb|ACD97665.1| Chromosome segregation ATPase [Bifidobacterium longum DJO10A] Length = 1225 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297559198|ref|YP_003678172.1| chromosome segregation protein SMC [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843646|gb|ADH65666.1| chromosome segregation protein SMC [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1181 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKNLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|224826989|ref|ZP_03700087.1| chromosome segregation protein SMC [Lutiella nitroferrum 2002] gi|224600822|gb|EEG07007.1| chromosome segregation protein SMC [Lutiella nitroferrum 2002] Length = 1161 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFVDPTAIPVPGQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDVIFNGSSTRKPVSRA 78 >gi|315445097|ref|YP_004077976.1| condensin subunit Smc [Mycobacterium sp. Spyr1] gi|315263400|gb|ADU00142.1| condensin subunit Smc [Mycobacterium sp. Spyr1] Length = 1194 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|253583564|ref|ZP_04860762.1| chromosome partition protein smc [Fusobacterium varium ATCC 27725] gi|251834136|gb|EES62699.1| chromosome partition protein smc [Fusobacterium varium ATCC 27725] Length = 1172 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI F+ F E IEF +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEIFGFKSFGEKVYIEFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K PM A Sbjct: 61 SSDVIFSGGKDKKPMNSA 78 >gi|145224767|ref|YP_001135445.1| chromosome segregation protein SMC [Mycobacterium gilvum PYR-GCK] gi|145217253|gb|ABP46657.1| condensin subunit Smc [Mycobacterium gilvum PYR-GCK] Length = 1194 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|118472416|ref|YP_886763.1| chromosome segregation protein SMC [Mycobacterium smegmatis str. MC2 155] gi|118173703|gb|ABK74599.1| chromosome segregation protein SMC [Mycobacterium smegmatis str. MC2 155] Length = 1195 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|120403167|ref|YP_952996.1| chromosome segregation protein SMC [Mycobacterium vanbaalenii PYR-1] gi|119955985|gb|ABM12990.1| condensin subunit Smc [Mycobacterium vanbaalenii PYR-1] Length = 1194 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|307264840|ref|ZP_07546402.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306920098|gb|EFN50310.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 810 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLNFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|288961586|ref|YP_003451896.1| chromosome segregation protein [Azospirillum sp. B510] gi|288913866|dbj|BAI75352.1| chromosome segregation protein [Azospirillum sp. B510] Length = 1153 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F + + +T + G NG GKS+L EA+ W+ + +R GD Sbjct: 1 MQFTRLRLSGFKSFVDATDLVIEPGMTGIVGPNGCGKSNLVEALRWVMGETSAKRMRGDD 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|255326581|ref|ZP_05367658.1| chromosome segregation protein SMC [Rothia mucilaginosa ATCC 25296] gi|255296321|gb|EET75661.1| chromosome segregation protein SMC [Rothia mucilaginosa ATCC 25296] Length = 1102 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ + + F+ F EF + V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLMSLTLRGFKSFASATTFEFTPGINAVVGPNGSGKSNVLDALAWVMGEQGAKSLRGGS 60 Query: 87 IKK 89 +K Sbjct: 61 MKD 63 >gi|220931569|ref|YP_002508477.1| chromosome segregation protein SMC [Halothermothrix orenii H 168] gi|219992879|gb|ACL69482.1| chromosome segregation protein SMC [Halothermothrix orenii H 168] Length = 1185 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + I F +T + G NG GKS++ +AI W+ + + G Sbjct: 1 MFLKKLELKGFKSFAKPITINFESPITAIVGPNGSGKSNIVDAIRWVLGEQSAKTLRGSR 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K + A Sbjct: 61 MADVIFAGSKDYKALNKA 78 >gi|168207933|ref|ZP_02633938.1| chromosome segregation protein SMC [Clostridium perfringens E str. JGS1987] gi|170660747|gb|EDT13430.1| chromosome segregation protein SMC [Clostridium perfringens E str. JGS1987] Length = 1185 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + ++ F +T + G NG GKS++S+++ W+ + + G Sbjct: 1 MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFTGTEYRKPIGYA 78 >gi|322691439|ref|YP_004221009.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. longum JCM 1217] gi|320456295|dbj|BAJ66917.1| chromosome partitioning protein Smc [Bifidobacterium longum subsp. longum JCM 1217] Length = 1225 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|317483516|ref|ZP_07942501.1| chromosome segregation protein SMC [Bifidobacterium sp. 12_1_47BFAA] gi|316915040|gb|EFV36477.1| chromosome segregation protein SMC [Bifidobacterium sp. 12_1_47BFAA] Length = 1225 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|227547590|ref|ZP_03977639.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211845|gb|EEI79741.1| chromosome segregation protein SMC [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 1225 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239621193|ref|ZP_04664224.1| condensin subunit Smc [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515654|gb|EEQ55521.1| condensin subunit Smc [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 1225 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYLKELTLRGFKSFASVTTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|312143707|ref|YP_003995153.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] gi|311904358|gb|ADQ14799.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] Length = 1206 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 31/73 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F IE +++T V G NG GKS++ +A+ W+ + + G Sbjct: 4 IFLTKIRLKGFKSFANKTDIELEENITAVVGPNGSGKSNIVDAVRWVLGEQSAKTLRGSR 63 Query: 87 IKKRSIKTPMPMC 99 + + Sbjct: 64 MSDIIFSGSEELN 76 >gi|257468091|ref|ZP_05632187.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] gi|317062376|ref|ZP_07926861.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] gi|313688052|gb|EFS24887.1| chromosome partition protein smc [Fusobacterium ulcerans ATCC 49185] Length = 1172 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI F+ F E IEF +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEIFGFKSFGERVYIEFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K PM A Sbjct: 61 SSDVIFSGGKDKKPMNSA 78 >gi|257126140|ref|YP_003164254.1| SMC domain protein [Leptotrichia buccalis C-1013-b] gi|257050079|gb|ACV39263.1| SMC domain protein [Leptotrichia buccalis C-1013-b] Length = 1209 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +E++ F+ F +EF + +T + G NG GKS++ +AI W+ + + Sbjct: 1 MYLKALELTGFKSFANRTVVEFDNGITSIVGPNGSGKSNILDAILWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 I K P MA Sbjct: 61 SSDIIFSGGKNKKPKSMA 78 >gi|237799567|ref|ZP_04588028.1| chromosome segregation protein SMC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022423|gb|EGI02480.1| chromosome segregation protein SMC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 227 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|257485004|ref|ZP_05639045.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 205 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MTDVIFNGSTSRKPVSQA 78 >gi|291299633|ref|YP_003510911.1| chromosome segregation protein SMC [Stackebrandtia nassauensis DSM 44728] gi|290568853|gb|ADD41818.1| chromosome segregation protein SMC [Stackebrandtia nassauensis DSM 44728] Length = 1191 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294649512|ref|ZP_06726933.1| chromosome segregation ATPase [Acinetobacter haemolyticus ATCC 19194] gi|292824573|gb|EFF83355.1| chromosome segregation ATPase [Acinetobacter haemolyticus ATCC 19194] Length = 858 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|262373319|ref|ZP_06066598.1| chromosome segregation protein SMC [Acinetobacter junii SH205] gi|262313344|gb|EEY94429.1| chromosome segregation protein SMC [Acinetobacter junii SH205] Length = 1149 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|226953498|ref|ZP_03823962.1| chromosome segregation ATPase [Acinetobacter sp. ATCC 27244] gi|226835783|gb|EEH68166.1| chromosome segregation ATPase [Acinetobacter sp. ATCC 27244] Length = 1152 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + F + T V G NG GKS++ +AI W+ R+ G S Sbjct: 1 MRLSSLKLSGFKSFADSTTLHFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ P+ +A Sbjct: 61 MQDVIFTGTSKRKPVGVA 78 >gi|296158914|ref|ZP_06841742.1| chromosome segregation protein SMC [Burkholderia sp. Ch1-1] gi|295890789|gb|EFG70579.1| chromosome segregation protein SMC [Burkholderia sp. Ch1-1] Length = 1198 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 40/89 (44%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLYRRTAGAAFTSHPFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQD 89 >gi|91784127|ref|YP_559333.1| chromosome segregation protein SMC [Burkholderia xenovorans LB400] gi|91688081|gb|ABE31281.1| Chromosome segregation protein SMC [Burkholderia xenovorans LB400] Length = 1198 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 40/89 (44%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLYRRTAGAAFTSHPFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQD 89 >gi|238022149|ref|ZP_04602575.1| hypothetical protein GCWU000324_02055 [Kingella oralis ATCC 51147] gi|237866763|gb|EEP67805.1| hypothetical protein GCWU000324_02055 [Kingella oralis ATCC 51147] Length = 1160 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTQIKLAGFKSFIDPTTIHVPSQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGES 60 Query: 87 IKK---RSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVISNGAATRRP----APRASVEL 82 >gi|332667919|ref|YP_004450707.1| chromosome segregation protein SMC [Haliscomenobacter hydrossis DSM 1100] gi|332336733|gb|AEE53834.1| chromosome segregation protein SMC [Haliscomenobacter hydrossis DSM 1100] Length = 1185 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F I F + + G NG GKS++ +AI W+ + R D Sbjct: 1 MRLKSLEIKGFKSFANSTVINFGADVIGIVGPNGSGKSNVVDAIRWVLGEQSSRELRLDQ 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K P +A Sbjct: 61 MSSVIFNGTKKRKPAGIA 78 >gi|329118035|ref|ZP_08246748.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465923|gb|EGF12195.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria bacilliformis ATCC BAA-1200] Length = 1162 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325207588|gb|ADZ03040.1| chromosome segregation protein SMC [Neisseria meningitidis NZ-05/33] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325206603|gb|ADZ02056.1| chromosome segregation protein SMC [Neisseria meningitidis M04-240196] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325203636|gb|ADY99089.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240355] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325202666|gb|ADY98120.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240149] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325143894|gb|EGC66206.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240013] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325141757|gb|EGC64209.1| chromosome segregation protein SMC [Neisseria meningitidis 961-5945] gi|325197757|gb|ADY93213.1| chromosome segregation protein SMC [Neisseria meningitidis G2136] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325135865|gb|EGC58477.1| chromosome segregation protein SMC [Neisseria meningitidis M0579] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325133939|gb|EGC56595.1| chromosome segregation protein SMC [Neisseria meningitidis M13399] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325129675|gb|EGC52489.1| chromosome segregation protein SMC [Neisseria meningitidis OX99.30304] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|319637793|ref|ZP_07992559.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] gi|317400948|gb|EFV81603.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|317164767|gb|ADV08308.1| hypothetical protein NGTW08_1343 [Neisseria gonorrhoeae TCDC-NG08107] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|316985405|gb|EFV64353.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] gi|325200767|gb|ADY96222.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|313668974|ref|YP_004049258.1| hypothetical protein NLA_16940 [Neisseria lactamica ST-640] gi|313006436|emb|CBN87899.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|309379614|emb|CBX21785.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|308388730|gb|ADO31050.1| hypothetical protein NMBB_0592 [Neisseria meningitidis alpha710] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|304388228|ref|ZP_07370348.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] gi|304337755|gb|EFM03904.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|296314914|ref|ZP_06864855.1| SMC family protein [Neisseria polysaccharea ATCC 43768] gi|296838099|gb|EFH22037.1| SMC family protein [Neisseria polysaccharea ATCC 43768] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|294670151|ref|ZP_06735076.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308078|gb|EFE49321.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|261393084|emb|CAX50681.1| SMC protein [Neisseria meningitidis 8013] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|255065092|ref|ZP_05316947.1| SMC family protein [Neisseria sicca ATCC 29256] gi|255050513|gb|EET45977.1| SMC family protein [Neisseria sicca ATCC 29256] Length = 1160 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|254671825|emb|CBA03959.1| putative chromosome partition protein [Neisseria meningitidis alpha275] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|254671447|emb|CBA08972.1| putative chromosome partition protein [Neisseria meningitidis alpha153] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|254804429|ref|YP_003082650.1| chromosome segregation protein [Neisseria meningitidis alpha14] gi|254667971|emb|CBA04250.1| chromosome segregation protein [Neisseria meningitidis alpha14] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|241758637|ref|ZP_04756751.1| chromosome segregation protein SMC [Neisseria flavescens SK114] gi|241321148|gb|EER57344.1| chromosome segregation protein SMC [Neisseria flavescens SK114] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240128717|ref|ZP_04741378.1| hypothetical protein NgonS_08832 [Neisseria gonorrhoeae SK-93-1035] gi|268687103|ref|ZP_06153965.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627387|gb|EEZ59787.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240126328|ref|ZP_04739214.1| hypothetical protein NgonSK_09014 [Neisseria gonorrhoeae SK-92-679] gi|268684913|ref|ZP_06151775.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268625197|gb|EEZ57597.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240124052|ref|ZP_04737008.1| hypothetical protein NgonP_08948 [Neisseria gonorrhoeae PID332] gi|268682678|ref|ZP_06149540.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268622962|gb|EEZ55362.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240118508|ref|ZP_04732570.1| hypothetical protein NgonPID_08607 [Neisseria gonorrhoeae PID1] gi|268604217|ref|ZP_06138384.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268588348|gb|EEZ53024.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240116224|ref|ZP_04730286.1| hypothetical protein NgonPID1_08280 [Neisseria gonorrhoeae PID18] gi|260439963|ref|ZP_05793779.1| hypothetical protein NgonDG_02565 [Neisseria gonorrhoeae DGI2] gi|268601886|ref|ZP_06136053.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|291043248|ref|ZP_06568971.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|268586017|gb|EEZ50693.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|291012854|gb|EFE04837.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240081217|ref|ZP_04725760.1| hypothetical protein NgonF_07900 [Neisseria gonorrhoeae FA19] gi|268597327|ref|ZP_06131494.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268551115|gb|EEZ46134.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|240014697|ref|ZP_04721610.1| hypothetical protein NgonD_08643 [Neisseria gonorrhoeae DGI18] gi|240121219|ref|ZP_04734181.1| hypothetical protein NgonPI_05513 [Neisseria gonorrhoeae PID24-1] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|239999520|ref|ZP_04719444.1| hypothetical protein Ngon3_08551 [Neisseria gonorrhoeae 35/02] gi|240017144|ref|ZP_04723684.1| hypothetical protein NgonFA_08246 [Neisseria gonorrhoeae FA6140] gi|240113429|ref|ZP_04727919.1| hypothetical protein NgonM_07664 [Neisseria gonorrhoeae MS11] gi|268595333|ref|ZP_06129500.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268599502|ref|ZP_06133669.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268548722|gb|EEZ44140.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268583633|gb|EEZ48309.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|284799617|ref|ZP_06390248.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] gi|284797531|gb|EFC52878.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] Length = 635 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|261378219|ref|ZP_05982792.1| SMC family protein [Neisseria cinerea ATCC 14685] gi|269145294|gb|EEZ71712.1| SMC family protein [Neisseria cinerea ATCC 14685] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|261365297|ref|ZP_05978180.1| SMC family protein [Neisseria mucosa ATCC 25996] gi|288566221|gb|EFC87781.1| SMC family protein [Neisseria mucosa ATCC 25996] Length = 1160 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|194099237|ref|YP_002002328.1| hypothetical protein NGK_1703 [Neisseria gonorrhoeae NCCP11945] gi|254494237|ref|ZP_05107408.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|193934527|gb|ACF30351.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|226513277|gb|EEH62622.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|161869474|ref|YP_001598641.1| hypothetical protein NMCC_0486 [Neisseria meningitidis 053442] gi|161595027|gb|ABX72687.1| conserved hypothetical protein [Neisseria meningitidis 053442] gi|319409923|emb|CBY90248.1| SMC protein [Neisseria meningitidis WUE 2594] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|121634340|ref|YP_974585.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|120866046|emb|CAM09784.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|325131781|gb|EGC54482.1| chromosome segregation protein SMC [Neisseria meningitidis M6190] gi|325137671|gb|EGC60248.1| chromosome segregation protein SMC [Neisseria meningitidis ES14902] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|59801785|ref|YP_208497.1| hypothetical protein NGO1443 [Neisseria gonorrhoeae FA 1090] gi|293398567|ref|ZP_06642745.1| chromosome segregation protein SMC [Neisseria gonorrhoeae F62] gi|59718680|gb|AAW90085.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|291611038|gb|EFF40135.1| chromosome segregation protein SMC [Neisseria gonorrhoeae F62] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|15676451|ref|NP_273590.1| hypothetical protein NMB0545 [Neisseria meningitidis MC58] gi|7225771|gb|AAF40974.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325139802|gb|EGC62335.1| chromosome segregation protein SMC [Neisseria meningitidis CU385] Length = 1161 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|294155353|ref|YP_003559737.1| chromosomal segregation and condensation complex, SMC protein [Mycoplasma crocodyli MP145] gi|291600153|gb|ADE19649.1| chromosomal segregation and condensation complex, SMC protein [Mycoplasma crocodyli MP145] Length = 982 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ IE F+ F + + F +T + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKIEAHGFKSFADPVVLHFDGGVTGIVGPNGSGKSNINDAIKWVLGEQSSKELRGDN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT + A Sbjct: 61 MHDVIFAGSKTVKALDKA 78 >gi|295103253|emb|CBL00797.1| condensin subunit Smc [Faecalibacterium prausnitzii SL3/3] Length = 1185 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ + R+ Sbjct: 1 MVFKELEIQGFKSFPDKVKISFDTGVTGVVGPNGSGKSNLSDAVRWVLGETSSRQLRAAG 60 Query: 85 --DSIKKRSIKTPMPMCMAVPR 104 + + + PM A R Sbjct: 61 KMEDVIFGGTRKRSPMGFAQVR 82 >gi|160946002|ref|ZP_02093228.1| hypothetical protein FAEPRAM212_03535 [Faecalibacterium prausnitzii M21/2] gi|158443733|gb|EDP20738.1| hypothetical protein FAEPRAM212_03535 [Faecalibacterium prausnitzii M21/2] Length = 1185 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ + R+ Sbjct: 1 MVFKELEIQGFKSFPDKVKISFDTGVTGVVGPNGSGKSNLSDAVRWVLGETSSRQLRAAG 60 Query: 85 --DSIKKRSIKTPMPMCMAVPR 104 + + + PM A R Sbjct: 61 KMEDVIFGGTRKRSPMGFAQVR 82 >gi|307611497|emb|CBX01171.1| hypothetical protein LPW_28701 [Legionella pneumophila 130b] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|296108265|ref|YP_003619966.1| chromosome segregation SMC protein [Legionella pneumophila 2300/99 Alcoy] gi|295650167|gb|ADG26014.1| chromosome segregation SMC protein [Legionella pneumophila 2300/99 Alcoy] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|148358645|ref|YP_001249852.1| chromosome segregation SMC protein [Legionella pneumophila str. Corby] gi|148280418|gb|ABQ54506.1| chromosome segregation SMC protein [Legionella pneumophila str. Corby] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|52842826|ref|YP_096625.1| chromosome segregation SMC protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629937|gb|AAU28678.1| chromosome segregation SMC protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|54295457|ref|YP_127872.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] gi|53755289|emb|CAH16783.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|54298609|ref|YP_124978.1| hypothetical protein lpp2673 [Legionella pneumophila str. Paris] gi|53752394|emb|CAH13826.1| hypothetical protein lpp2673 [Legionella pneumophila str. Paris] Length = 1164 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTTVHFPSRLVAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDIIFNGSSNRKPVGQA 78 >gi|294788255|ref|ZP_06753498.1| putative RecF/RecN/SMC N domain protein [Simonsiella muelleri ATCC 29453] gi|294483686|gb|EFG31370.1| putative RecF/RecN/SMC N domain protein [Simonsiella muelleri ATCC 29453] Length = 1159 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G++ Sbjct: 1 MRLTHIKLAGFKSFTDPTTIHVPSQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGEN 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|170781180|ref|YP_001709512.1| putative chromosome structure maintenance protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155748|emb|CAQ00869.1| putative chromosome structure maintenance protein [Clavibacter michiganensis subsp. sepedonicus] Length = 1241 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFAQPTTFQFETGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ A Sbjct: 61 MEDVIFAGTSTRGPLGRA 78 >gi|148272541|ref|YP_001222102.1| putative chromosome segregation ATPase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830471|emb|CAN01406.1| putative chromosome segregation ATPase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 1251 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFAQPTTFQFETGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ A Sbjct: 61 MEDVIFAGTSTRGPLGRA 78 >gi|15829185|ref|NP_326545.1| ABC transporter ATP-binding protein [Mycoplasma pulmonis UAB CTIP] gi|14090129|emb|CAC13887.1| P115-LIKE (Mycoplasma hyorhinis) ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 979 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ I+ F+ F E ++ F + + G NG GKS++++AI+W+ + + GD+ Sbjct: 1 MKLIKIQAHGFKSFAEPIQLSFDGGVAGIIGPNGSGKSNINDAIKWVLGEQSSKSLRGDN 60 Query: 87 I---KKRSIKTPMPMCMA 101 + K M A Sbjct: 61 MEDVIFAGSKNVKEMNKA 78 >gi|218767667|ref|YP_002342179.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491] gi|121051675|emb|CAM07978.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491] Length = 1161 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEVSAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|326791394|ref|YP_004309215.1| chromosome segregation protein SMC [Clostridium lentocellum DSM 5427] gi|326542158|gb|ADZ84017.1| chromosome segregation protein SMC [Clostridium lentocellum DSM 5427] Length = 1196 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + K+ +T V G NG GKS++++AI W+ + + G Sbjct: 1 MYLDKIEIHGFKSFGDAVKLNIPKGITGVIGPNGSGKSNVADAIRWVLGEQSAKSLRGSK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|240169623|ref|ZP_04748282.1| chromosome partition protein Smc [Mycobacterium kansasii ATCC 12478] Length = 1201 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFAAATTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|163840517|ref|YP_001624922.1| chromosome segregation protein [Renibacterium salmoninarum ATCC 33209] gi|162953993|gb|ABY23508.1| chromosome segregation protein [Renibacterium salmoninarum ATCC 33209] Length = 1204 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|312140446|ref|YP_004007782.1| chromosome segregation protein smc [Rhodococcus equi 103S] gi|311889785|emb|CBH49102.1| chromosome segregation protein Smc [Rhodococcus equi 103S] Length = 1200 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|325675939|ref|ZP_08155622.1| SMC structural maintenance of chromosomes partitioning protein [Rhodococcus equi ATCC 33707] gi|325553177|gb|EGD22856.1| SMC structural maintenance of chromosomes partitioning protein [Rhodococcus equi ATCC 33707] Length = 1200 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|54026138|ref|YP_120380.1| putative chromosome segregation protein [Nocardia farcinica IFM 10152] gi|54017646|dbj|BAD59016.1| putative chromosome segregation protein [Nocardia farcinica IFM 10152] Length = 1203 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|300783823|ref|YP_003764114.1| chromosome segregation ATPase [Amycolatopsis mediterranei U32] gi|299793337|gb|ADJ43712.1| chromosome segregation ATPase [Amycolatopsis mediterranei U32] Length = 1200 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|257055009|ref|YP_003132841.1| condensin subunit Smc [Saccharomonospora viridis DSM 43017] gi|256584881|gb|ACU96014.1| condensin subunit Smc [Saccharomonospora viridis DSM 43017] Length = 1199 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|226226600|ref|YP_002760706.1| chromosome segregation protein [Gemmatimonas aurantiaca T-27] gi|226089791|dbj|BAH38236.1| chromosome segregation protein [Gemmatimonas aurantiaca T-27] Length = 1191 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E+ F+ F + + F +T + G NG GKS++S+A+ W+ R G Sbjct: 1 MRLTKLEVHGFKAFADHLEFVFEKGVTAIVGPNGSGKSNVSDAVRWVLGEQRARAMRGAK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + MA Sbjct: 61 MEDVIFHGSSARKAVNMA 78 >gi|114570749|ref|YP_757429.1| condensin subunit Smc [Maricaulis maris MCS10] gi|114341211|gb|ABI66491.1| condensin subunit Smc [Maricaulis maris MCS10] Length = 1148 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + ++ F+ F E ++ LT V G NG GKS+L EA+ W+ + + GD Sbjct: 1 MKFTQLRLAGFKSFVEPTELRIDPGLTGVIGPNGCGKSNLLEALRWVMGATSAKSLRGDG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|296139304|ref|YP_003646547.1| chromosome segregation protein SMC [Tsukamurella paurometabola DSM 20162] gi|296027438|gb|ADG78208.1| chromosome segregation protein SMC [Tsukamurella paurometabola DSM 20162] Length = 1194 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASATTLRLEPGITCVVGPNGSGKSNILDALRWVMGEQGAKGLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|88810626|ref|ZP_01125883.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] gi|88792256|gb|EAR23366.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] Length = 1170 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E + + V G NG GKS++ +A+ W+ + R G+S Sbjct: 1 MRLNKIKLAGFKSFVEPTTVSLPGSIVGVVGPNGCGKSNIIDAVRWVMGESSPRYLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ MA Sbjct: 61 MADVIFNGSDARKPVSMA 78 >gi|325677955|ref|ZP_08157597.1| chromosome segregation protein SMC [Ruminococcus albus 8] gi|324110509|gb|EGC04683.1| chromosome segregation protein SMC [Ruminococcus albus 8] Length = 1184 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + + F +T V G NG GKS++S+A+ W+ + + G+ Sbjct: 1 MYLRGLELQGFKSFPDKTVLSFGKGITAVVGPNGSGKSNISDAMRWVMGEQSSKALRGEK 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|42522699|ref|NP_968079.1| chromosome segregation SMC protein [Bdellovibrio bacteriovorus HD100] gi|39573895|emb|CAE79072.1| chromosome segregation SMC protein [Bdellovibrio bacteriovorus HD100] Length = 1195 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ IE+ F+ F + I F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MRIKKIELIGFKSFKDRTVIHFDAGITGIVGPNGCGKSNIVDALMWVMGDQSAKDLRASQ 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|330986169|gb|EGH84272.1| chromosome segregation protein SMC [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1013 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI---K 88 I+++ F+ F + + F ++ V G NG GKS++ +A+ W+ + + G+S+ Sbjct: 2 IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVI 61 Query: 89 KRSIKTPMPMCMA 101 + P+ A Sbjct: 62 FNGSTSRKPVSQA 74 >gi|256824939|ref|YP_003148899.1| condensin subunit Smc [Kytococcus sedentarius DSM 20547] gi|256688332|gb|ACV06134.1| condensin subunit Smc [Kytococcus sedentarius DSM 20547] Length = 1217 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F K+E +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYVTSLTLKGFKSFASSTKLELEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|319948357|ref|ZP_08022501.1| chromosome segregation protein SMC [Dietzia cinnamea P4] gi|319437988|gb|EFV92964.1| chromosome segregation protein SMC [Dietzia cinnamea P4] Length = 234 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MYLKSLTLKGFKSFAAPTTLKFEPGICCVVGPNGSGKSNVVDALTWVMGEHSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|256750713|ref|ZP_05491598.1| SMC domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256750296|gb|EEU63315.1| SMC domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 451 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +E+ F+ F + + F +T + G NG GKS++S+AI + + + G Sbjct: 1 MYLKKLELQGFKSFADKVTLNFEKGVTAIVGPNGSGKSNISDAIRLVLGEQSIKSLRGSK 60 Query: 85 -DSIKKRSIKTPMPM 98 + + + P+ Sbjct: 61 LEDVIFAGSENRKPL 75 >gi|167949865|ref|ZP_02536939.1| Chromosome segregation protein SMC [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 121 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + +L + G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MRLEKIKLAGFKSFVDPTTVPMPSNLVGIVGPNGCGKSNVIDAVRWVMGESSAKMLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 MADVIFNGSSSRKPVGTA 78 >gi|72161059|ref|YP_288716.1| condensin subunit Smc [Thermobifida fusca YX] gi|71914791|gb|AAZ54693.1| condensin subunit Smc [Thermobifida fusca YX] Length = 1183 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKTLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|229491402|ref|ZP_04385226.1| chromosome segregation protein SMC [Rhodococcus erythropolis SK121] gi|229321687|gb|EEN87484.1| chromosome segregation protein SMC [Rhodococcus erythropolis SK121] Length = 1195 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|262202013|ref|YP_003273221.1| chromosome segregation protein SMC [Gordonia bronchialis DSM 43247] gi|262085360|gb|ACY21328.1| chromosome segregation protein SMC [Gordonia bronchialis DSM 43247] Length = 1217 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|226365989|ref|YP_002783772.1| chromosome partition protein SMC [Rhodococcus opacus B4] gi|226244479|dbj|BAH54827.1| chromosome partition protein SMC [Rhodococcus opacus B4] Length = 1201 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|226305924|ref|YP_002765884.1| chromosome partition protein SMC [Rhodococcus erythropolis PR4] gi|226185041|dbj|BAH33145.1| chromosome partition protein SMC [Rhodococcus erythropolis PR4] Length = 1195 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|111023487|ref|YP_706459.1| chromosome partition protein [Rhodococcus jostii RHA1] gi|110823017|gb|ABG98301.1| chromosome partition protein [Rhodococcus jostii RHA1] Length = 1201 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|153954023|ref|YP_001394788.1| hypothetical protein CKL_1398 [Clostridium kluyveri DSM 555] gi|146346904|gb|EDK33440.1| Hypothetical protein CKL_1398 [Clostridium kluyveri DSM 555] Length = 1183 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKTIEIKGFKSFADKTELIFTGGITSIVGPNGSGKSNISDAVRWVLGEQSVKTLRGGK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQFRKPLGLC 78 >gi|219854637|ref|YP_002471759.1| hypothetical protein CKR_1294 [Clostridium kluyveri NBRC 12016] gi|219568361|dbj|BAH06345.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 1185 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + ++ F +T + G NG GKS++S+A+ W+ + + G Sbjct: 3 MFLKTIEIKGFKSFADKTELIFTGGITSIVGPNGSGKSNISDAVRWVLGEQSVKTLRGGK 62 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 63 MEDVIFAGTQFRKPLGLC 80 >gi|292491546|ref|YP_003526985.1| chromosome segregation protein SMC [Nitrosococcus halophilus Nc4] gi|291580141|gb|ADE14598.1| chromosome segregation protein SMC [Nitrosococcus halophilus Nc4] Length = 1169 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + + + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKKIKLAGFKSFVDPTSLPLPSNCVAIVGPNGCGKSNVIDAVRWVMGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 MADVIFNGSTSRKP----VGQCSVEL 82 >gi|28375555|emb|CAD66601.1| SMC protein [Methylococcus capsulatus] Length = 1169 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++I+ F+ F + + +L V G NG GKS++ +A+ W+ + R G++ Sbjct: 1 MRLEKLKIAGFKSFVDPTTLPLPGNLVGVVGPNGCGKSNVIDAVRWVMGESSARHLRGET 60 Query: 87 I---KKRSIKTPMPMCMA 101 + T P A Sbjct: 61 MADVIFNGSSTRKPASQA 78 >gi|47459245|ref|YP_016107.1| segregation of chromosomes protein [Mycoplasma mobile 163K] gi|47458574|gb|AAT27896.1| segregation of chromosomes protein [Mycoplasma mobile 163K] Length = 974 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ IE F+ F + + F + + G NG GKS++++AI W+ + + GD+ Sbjct: 1 MKLIKIEAKGFKSFADGITLNFDGGIVGIVGPNGSGKSNINDAIRWVLGEQSFKALRGDN 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|303233285|ref|ZP_07319956.1| chromosome segregation protein SMC [Atopobium vaginae PB189-T1-4] gi|302480585|gb|EFL43674.1| chromosome segregation protein SMC [Atopobium vaginae PB189-T1-4] Length = 1203 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + I F L+++ G NG GKS++S+AI W+ + + G + Sbjct: 1 MYLASLTLKGFKSFADKTSIVFDPGLSVIVGPNGSGKSNISDAILWVLGEKSPKILRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302525132|ref|ZP_07277474.1| chromosome segregation protein SMC [Streptomyces sp. AA4] gi|302434027|gb|EFL05843.1| chromosome segregation protein SMC [Streptomyces sp. AA4] Length = 1208 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 9 VHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK 68 Query: 87 IKK 89 ++ Sbjct: 69 MED 71 >gi|297626604|ref|YP_003688367.1| Chromosome partition protein Smc [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922369|emb|CBL56941.1| Chromosome partition protein Smc [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1181 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + F +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASATTLAFEPGITAIVGPNGSGKSNIVDALAWVMGEQGAKHLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ A Sbjct: 61 MDDVIFAGTAGRPPLGRA 78 >gi|256379946|ref|YP_003103606.1| chromosome segregation protein SMC [Actinosynnema mirum DSM 43827] gi|255924249|gb|ACU39760.1| chromosome segregation protein SMC [Actinosynnema mirum DSM 43827] Length = 1194 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 4 VHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK 63 Query: 87 IKK 89 ++ Sbjct: 64 MED 66 >gi|255524261|ref|ZP_05391220.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|296185383|ref|ZP_06853793.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|255512086|gb|EET88367.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] gi|296050217|gb|EFG89641.1| chromosome segregation protein SMC [Clostridium carboxidivorans P7] Length = 1188 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + ++ F + + + G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSMEIRGFKSFADKTELVFKNGIMGIVGPNGSGKSNISDAVRWVLGEQSVKSLRGGK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQFRKPVGLC 78 >gi|220912980|ref|YP_002488289.1| chromosome segregation protein SMC [Arthrobacter chlorophenolicus A6] gi|219859858|gb|ACL40200.1| chromosome segregation protein SMC [Arthrobacter chlorophenolicus A6] Length = 1195 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTVRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|116671041|ref|YP_831974.1| condensin subunit Smc [Arthrobacter sp. FB24] gi|116611150|gb|ABK03874.1| condensin subunit Smc [Arthrobacter sp. FB24] Length = 1222 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTVRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|15895028|ref|NP_348377.1| chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum ATCC 824] gi|15024720|gb|AAK79717.1|AE007684_5 Chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum ATCC 824] gi|325509165|gb|ADZ20801.1| Chromosome segregation SMC protein, ATPase [Clostridium acetobutylicum EA 2018] Length = 1191 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + + F + +T V G NG GKS++S+A+ W+ + + G Sbjct: 1 MFLKSIEIRGFKSFADKTDLIFKNGITAVVGPNGSGKSNISDAVLWVLGEQSVKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|332655291|ref|ZP_08421031.1| SMC family, C- domain protein [Ruminococcaceae bacterium D16] gi|332515796|gb|EGJ45406.1| SMC family, C- domain protein [Ruminococcaceae bacterium D16] Length = 1193 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + + F +T + G NG GKS++S+AI W+ + R G Sbjct: 4 LYLKALEIQGFKSFPDKTVLTFGSDITAIVGPNGSGKSNISDAIRWVMGEQSTRVLRGGK 63 Query: 87 IKK 89 ++ Sbjct: 64 MED 66 >gi|74317246|ref|YP_314986.1| condensin subunit Smc [Thiobacillus denitrificans ATCC 25259] gi|74056741|gb|AAZ97181.1| Chromosome segregation protein SMC [Thiobacillus denitrificans ATCC 25259] Length = 1165 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I LT V G NG GKS++ +A+ W+ + + G++ Sbjct: 1 MRLTHIKLAGFKSFVDPTVIPVPAQLTGVVGPNGCGKSNVIDAVRWVLGESSAKHLRGET 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|295100362|emb|CBK97907.1| condensin subunit Smc [Faecalibacterium prausnitzii L2-6] Length = 1185 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++EI F+ F + KI F + +T V G NG GKS+LS+A+ W+ + R+ Sbjct: 1 MVFKELEIQGFKSFPDKVKIRFDEGVTGVVGPNGSGKSNLSDAVRWVLGETSSRQLRAAG 60 Query: 85 --DSIKKRSIKTPMPMCMAVPR 104 + + + M A+ R Sbjct: 61 KMEDVIFGGTRRRGAMGFAMVR 82 >gi|317057720|ref|YP_004106187.1| chromosome segregation protein SMc [Ruminococcus albus 7] gi|315449989|gb|ADU23553.1| chromosome segregation protein SMC [Ruminococcus albus 7] Length = 1191 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F + + F +T V G NG GKS++S+A+ W+ + + G+ Sbjct: 1 MYLRCLELQGFKSFPDKTVLTFGKGITAVVGPNGSGKSNISDAMRWVMGEQSSKALRGEK 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|187924441|ref|YP_001896083.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] gi|187715635|gb|ACD16859.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] Length = 1198 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 40/89 (44%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M+ R+ A S + ++ +L I+++ F+ F + + L V G NG Sbjct: 1 MSLCRRTAGAAFTSHLFFPFSNSEIAVRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNG 60 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 GKS++ +A+ W+ G+S++ Sbjct: 61 CGKSNIIDAVRWVLGESRASELRGESMQD 89 >gi|326382861|ref|ZP_08204551.1| chromosome partition protein SMC [Gordonia neofelifaecis NRRL B-59395] gi|326198451|gb|EGD55635.1| chromosome partition protein SMC [Gordonia neofelifaecis NRRL B-59395] Length = 1218 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASSTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|300854471|ref|YP_003779455.1| putative chromosome segregation protein [Clostridium ljungdahlii DSM 13528] gi|300434586|gb|ADK14353.1| predicted chromosome segregation protein [Clostridium ljungdahlii DSM 13528] Length = 1187 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +IEI F+ F + ++ F +T + G NG GKS++S+AI+W+ + + G Sbjct: 1 MFLKNIEIRGFKSFADKTELIFKGGVTSIVGPNGSGKSNISDAIKWVLGEQSVKSLRGGK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ + P+ +C Sbjct: 61 MEDVIFAGTQYRKPVGLC 78 >gi|268608883|ref|ZP_06142610.1| structural maintenance of chromosome protein (chromosome segregation ATPase), putative [Ruminococcus flavefaciens FD-1] Length = 1190 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F + + F LT V G NG GKS++ +++ W+ + + G+ Sbjct: 1 MYLKSLEIQGFKSFPDKISLTFDKGLTAVVGPNGSGKSNIGDSVRWVLGEQSTKTLRGNK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM A Sbjct: 61 MEDVIFSGTVARKPMGFA 78 >gi|325127621|gb|EGC50537.1| chromosome segregation protein SMC [Neisseria meningitidis N1568] Length = 1161 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTDPTTIYVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|315924202|ref|ZP_07920428.1| chromosome segregation protein Smc [Pseudoramibacter alactolyticus ATCC 23263] gi|315622604|gb|EFV02559.1| chromosome segregation protein Smc [Pseudoramibacter alactolyticus ATCC 23263] Length = 1192 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + I+ F+ F + ++ F + + G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLRITGFKSFADTVELSFDQMIAAIVGPNGSGKSNIIDAIRWVLGEQRSKSLRGKR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + PM A Sbjct: 61 MEDVIFSGSDYHKPMNYA 78 >gi|308177250|ref|YP_003916656.1| chromosome segregation protein Smc [Arthrobacter arilaitensis Re117] gi|307744713|emb|CBT75685.1| chromosome segregation protein Smc [Arthrobacter arilaitensis Re117] Length = 1190 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F EF +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTVRGFKSFASATTFEFEPGVTAVVGPNGSGKSNVVDALSWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|311898545|dbj|BAJ30953.1| putative chromosome segregation protein SMC [Kitasatospora setae KM-6054] Length = 1222 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|307329840|ref|ZP_07608995.1| SMC domain protein [Streptomyces violaceusniger Tu 4113] gi|306884569|gb|EFN15600.1| SMC domain protein [Streptomyces violaceusniger Tu 4113] Length = 581 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302542227|ref|ZP_07294569.1| smc [Streptomyces hygroscopicus ATCC 53653] gi|302459845|gb|EFL22938.1| smc [Streptomyces himastatinicus ATCC 53653] Length = 522 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302537172|ref|ZP_07289514.1| predicted protein [Streptomyces sp. C] gi|302446067|gb|EFL17883.1| predicted protein [Streptomyces sp. C] Length = 667 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297156893|gb|ADI06605.1| chromosome segregation protein [Streptomyces bingchenggensis BCW-1] Length = 1345 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254383295|ref|ZP_04998648.1| chromosome segregation protein [Streptomyces sp. Mg1] gi|194342193|gb|EDX23159.1| chromosome segregation protein [Streptomyces sp. Mg1] Length = 648 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|326330616|ref|ZP_08196920.1| Smc [Nocardioidaceae bacterium Broad-1] gi|325951457|gb|EGD43493.1| Smc [Nocardioidaceae bacterium Broad-1] Length = 330 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +E +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKRLTLKGFKSFASATTLELEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|298370129|ref|ZP_06981445.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281589|gb|EFI23078.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon 014 str. F0314] Length = 1161 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT+ I L V G NG GKS++ +A+ W+ + ++ G++ Sbjct: 1 MRLSHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGEN 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|325108710|ref|YP_004269778.1| chromosome segregation protein SMC [Planctomyces brasiliensis DSM 5305] gi|324968978|gb|ADY59756.1| chromosome segregation protein SMC [Planctomyces brasiliensis DSM 5305] Length = 1315 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ F+ F + FA T V G NG GKS++ +A++WL + + G ++ Sbjct: 2 LKSLEVYGFKSFADRTTFAFAPGTTCVVGPNGSGKSNVVDAMKWLLGDQSPKSLRGKNMA 61 Query: 89 K 89 Sbjct: 62 D 62 >gi|270159077|ref|ZP_06187733.1| chromosome partition protein SMC [Legionella longbeachae D-4968] gi|289166087|ref|YP_003456225.1| chromosome partition protein smc [Legionella longbeachae NSW150] gi|269987416|gb|EEZ93671.1| chromosome partition protein SMC [Legionella longbeachae D-4968] gi|288859260|emb|CBJ13194.1| putative chromosome partition protein smc [Legionella longbeachae NSW150] Length = 1164 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + R G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTVVHFPSQLVAVVGPNGCGKSNIIDAVRWVMGESSARNLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|146296631|ref|YP_001180402.1| chromosome segregation protein SMC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410207|gb|ABP67211.1| condensin subunit Smc [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 1177 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQSLKLLRASK 60 Query: 87 IKKR 90 ++ Sbjct: 61 LEDL 64 >gi|309389187|gb|ADO77067.1| chromosome segregation protein SMC [Halanaerobium praevalens DSM 2228] Length = 1205 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F IE +++T + G NG GKS++ +AI W+ + + G Sbjct: 7 IFLKKIRLKGFKSFANKTDIEIEENITAIVGPNGSGKSNIVDAIRWVLGEQSAKNLRGSR 66 Query: 87 IKK 89 + Sbjct: 67 MAD 69 >gi|315656359|ref|ZP_07909248.1| chromosome segregation protein SMC [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492918|gb|EFU82520.1| chromosome segregation protein SMC [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 1201 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGSQ 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|315655727|ref|ZP_07908625.1| chromosome segregation protein SMC [Mobiluncus curtisii ATCC 51333] gi|315489791|gb|EFU79418.1| chromosome segregation protein SMC [Mobiluncus curtisii ATCC 51333] Length = 1201 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGSQ 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|304390864|ref|ZP_07372816.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325747|gb|EFL92993.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 1201 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGSQ 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|298345307|ref|YP_003717994.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus curtisii ATCC 43063] gi|298235368|gb|ADI66500.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus curtisii ATCC 43063] Length = 1201 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGSQ 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|171059195|ref|YP_001791544.1| chromosome segregation protein SMC [Leptothrix cholodnii SP-6] gi|170776640|gb|ACB34779.1| chromosome segregation protein SMC [Leptothrix cholodnii SP-6] Length = 1170 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTHFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|300114087|ref|YP_003760662.1| chromosome segregation protein SMC [Nitrosococcus watsonii C-113] gi|299540024|gb|ADJ28341.1| chromosome segregation protein SMC [Nitrosococcus watsonii C-113] Length = 1170 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++ F+ F + + + V G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKKIKLVGFKSFVDPTSLPLPSNRVAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 MADVIFNGSTSRKP----VGQCSVEL 82 >gi|301063005|ref|ZP_07203570.1| chromosome segregation protein SMC [delta proteobacterium NaphS2] gi|300442886|gb|EFK07086.1| chromosome segregation protein SMC [delta proteobacterium NaphS2] Length = 1192 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K+ I + F+ F E +I F ++ V G NG GKS++ +AI W + ++ G Sbjct: 1 MKIKQISVHGFKSFMERLEITFPTGISGVVGPNGCGKSNVVDAIRWCMGEQSPKQLRGRK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I P+ MA Sbjct: 61 MEDIIFSGAGNSKPLGMA 78 >gi|294787079|ref|ZP_06752333.1| Smc [Parascardovia denticolens F0305] gi|315226731|ref|ZP_07868519.1| chromosome partitioning protein Smc [Parascardovia denticolens DSM 10105] gi|294485912|gb|EFG33546.1| Smc [Parascardovia denticolens F0305] gi|315120863|gb|EFT83995.1| chromosome partitioning protein Smc [Parascardovia denticolens DSM 10105] Length = 1225 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYVKELTLRGFKSFANATTLRFEPGITAVVGPNGSGKSNIVDALAWVMGEQGAKTLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294791072|ref|ZP_06756230.1| Smc [Scardovia inopinata F0304] gi|294458969|gb|EFG27322.1| Smc [Scardovia inopinata F0304] Length = 1257 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F + F +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MYVKELTLRGFKSFANATTLRFEPGITAVVGPNGSGKSNIVDALAWVMGEQGAKTLRGTS 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|326402642|ref|YP_004282723.1| chromosome segregation protein [Acidiphilium multivorum AIU301] gi|325049503|dbj|BAJ79841.1| chromosome segregation protein [Acidiphilium multivorum AIU301] Length = 1165 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + IS F+ F + I+ LT + G NG GKS++ +A+ W + + G + Sbjct: 4 RFARLRISGFKSFADPTTIDILPGLTGIIGPNGCGKSNVVDALRWAMGEASAKSLRGGEM 63 Query: 88 KK 89 + Sbjct: 64 ED 65 >gi|148259416|ref|YP_001233543.1| chromosome segregation protein SMC [Acidiphilium cryptum JF-5] gi|146401097|gb|ABQ29624.1| condensin subunit Smc [Acidiphilium cryptum JF-5] Length = 1165 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + IS F+ F + I+ LT + G NG GKS++ +A+ W + + G + Sbjct: 4 RFARLRISGFKSFADPTTIDILPGLTGIIGPNGCGKSNVVDALRWAMGEASAKSLRGGEM 63 Query: 88 KK 89 + Sbjct: 64 ED 65 >gi|119717497|ref|YP_924462.1| condensin subunit Smc [Nocardioides sp. JS614] gi|119538158|gb|ABL82775.1| condensin subunit Smc [Nocardioides sp. JS614] Length = 1188 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASSTTLQLEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|260907265|ref|ZP_05915587.1| chromosome partition protein SMC [Brevibacterium linens BL2] Length = 1199 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|226941793|ref|YP_002796867.1| SMC protein [Laribacter hongkongensis HLHK9] gi|226716720|gb|ACO75858.1| SMC protein [Laribacter hongkongensis HLHK9] Length = 1162 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLAGFKSFVDPTAIPVPGQLVAVCGPNGCGKSNVIDAVRWVLGESSAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P A Sbjct: 61 MQDVIFNGSSTRKPAGRA 78 >gi|119962078|ref|YP_948190.1| chromosome segregation protein SMC [Arthrobacter aurescens TC1] gi|119948937|gb|ABM07848.1| chromosome segregation protein SMC [Arthrobacter aurescens TC1] Length = 1206 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +F +T V G NG GKS++ +A+ W+ + G Sbjct: 15 LHLKSLTVRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 74 Query: 87 IKK 89 ++ Sbjct: 75 MED 77 >gi|209963842|ref|YP_002296757.1| SMC family protein [Rhodospirillum centenum SW] gi|209957308|gb|ACI97944.1| SMC family protein [Rhodospirillum centenum SW] Length = 1175 Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + IS F+ F + +++ +T + G NG GKS+L EA+ W+ + ++ G Sbjct: 1 MQFTRLRISGFKSFVDATELQIEPGMTGIVGPNGCGKSNLVEALRWVMGETSAKKMRGAD 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|82701778|ref|YP_411344.1| chromosome segregation protein SMC [Nitrosospira multiformis ATCC 25196] gi|82409843|gb|ABB73952.1| condensin subunit Smc [Nitrosospira multiformis ATCC 25196] Length = 1190 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + +I F L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSHIKLAGFKSFVDPTEIPFPGDLVGVVGPNGCGKSNVIDAVRWVLGESRASALRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDVIFNGSTTRKPVGRA 78 >gi|294827836|ref|NP_711490.2| chromosome segregation protein [Leptospira interrogans serovar Lai str. 56601] gi|293385681|gb|AAN48508.2| chromosome segregation protein [Leptospira interrogans serovar Lai str. 56601] Length = 924 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +I T V G NG GKS++ +A++W+F + + GD Sbjct: 1 MYLKSLNIVGFKTFADETEILLDPGFTAVVGPNGSGKSNIVDAVKWVFGEKSAKGLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P A Sbjct: 61 MDDVIFHGSEARKPAGYA 78 >gi|254495860|ref|ZP_05108771.1| chromosome segregation SMC protein [Legionella drancourtii LLAP12] gi|254354926|gb|EET13550.1| chromosome segregation SMC protein [Legionella drancourtii LLAP12] Length = 1164 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ F+ F + + F L V G NG GKS++ +A+ W+ + R G+S Sbjct: 1 MHLKQLKLAGFKSFVDPTVVYFPSQLVAVVGPNGCGKSNIIDAVRWVMGESSARNLRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MTDVIFNGSSNRKPVGQA 78 >gi|296328179|ref|ZP_06870710.1| chromosome segregation ATPase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154691|gb|EFG95477.1| chromosome segregation ATPase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 1193 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 11 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 70 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 71 SQDVIFSGGKEKKPATKA 88 >gi|256827010|ref|YP_003150969.1| chromosome segregation protein SMC [Cryptobacterium curtum DSM 15641] gi|256583153|gb|ACU94287.1| chromosome segregation protein SMC [Cryptobacterium curtum DSM 15641] Length = 1184 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + F +T V G NG GKS++S+A+ W+ + G + Sbjct: 1 MHLKSLVLKGFKSFADRSVLSFEPGITAVVGPNGSGKSNVSDAVLWVLGERNAKNLRGQA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ +A Sbjct: 61 MEDVIFAGSAVRKPVSVA 78 >gi|77165172|ref|YP_343697.1| chromosome segregation protein SMC [Nitrosococcus oceani ATCC 19707] gi|254434247|ref|ZP_05047755.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27] gi|76883486|gb|ABA58167.1| condensin subunit Smc [Nitrosococcus oceani ATCC 19707] gi|207090580|gb|EDZ67851.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27] Length = 1170 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++ F+ F + + + + G NG GKS++ +A+ W+ + + GDS Sbjct: 1 MRLKKIKLVGFKSFVDPTSLPLPSNRMAIVGPNGCGKSNIIDAVRWVMGESSAKHLRGDS 60 Query: 87 I---KKRSIKTPMPMCMAVPRCKYQL 109 + + P V +C +L Sbjct: 61 MADVIFNGSTSRKP----VGQCSVEL 82 >gi|45658257|ref|YP_002343.1| chromosome segregation protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601499|gb|AAS70980.1| chromosome segregation protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 924 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +I T V G NG GKS++ +A++W+F + + GD Sbjct: 1 MYLKSLNIVGFKTFADETEILLDPGFTAVVGPNGSGKSNIVDAVKWVFGEKSAKGLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P A Sbjct: 61 MDDVIFHGSEARKPAGYA 78 >gi|225076848|ref|ZP_03720047.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] gi|224951834|gb|EEG33043.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] Length = 1161 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ FT I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLSGFKSFTAPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMAVPRCKYQL 109 ++ T P PR +L Sbjct: 61 MQDVIFNGAATRRP----APRASVEL 82 >gi|313896552|ref|ZP_07830101.1| chromosome segregation protein SMC [Selenomonas sp. oral taxon 137 str. F0430] gi|312974737|gb|EFR40203.1| chromosome segregation protein SMC [Selenomonas sp. oral taxon 137 str. F0430] Length = 1187 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F + +EF +T V G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFADRIVVEFDRGITAVVGPNGSGKSNITDAVRWVLGEQNIRMLRGLR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + +A Sbjct: 61 SEDIIFAGSTARRALSVA 78 >gi|296129309|ref|YP_003636559.1| chromosome segregation protein SMC [Cellulomonas flavigena DSM 20109] gi|296021124|gb|ADG74360.1| chromosome segregation protein SMC [Cellulomonas flavigena DSM 20109] Length = 1186 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTLRGFKSFASATTLSFEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|183220805|ref|YP_001838801.1| chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910905|ref|YP_001962460.1| chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775581|gb|ABZ93882.1| Chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779227|gb|ABZ97525.1| Chromosome segregation ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 927 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +I F T V G NG GKS++ ++++W+F + + G+ Sbjct: 1 MHLKSLNIVGFKTFADETEINFDPGFTAVVGPNGSGKSNIVDSVKWVFGEKSAKGLRGEK 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|322436028|ref|YP_004218240.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX9] gi|321163755|gb|ADW69460.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX9] Length = 1321 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL ++I F+ F + +++ + + + G NG GKS++S+AI W+ + + G Sbjct: 1 MLKLKKVQILGFKSFCDRTEVQLAGEGIAAIVGPNGCGKSNISDAITWVLGEQSAKSLRG 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + + P MA Sbjct: 61 IKMEDVIFAGTRDRKPTGMA 80 >gi|163848467|ref|YP_001636511.1| chromosome segregation protein SMC [Chloroflexus aurantiacus J-10-fl] gi|222526396|ref|YP_002570867.1| chromosome segregation protein SMC [Chloroflexus sp. Y-400-fl] gi|163669756|gb|ABY36122.1| chromosome segregation protein SMC [Chloroflexus aurantiacus J-10-fl] gi|222450275|gb|ACM54541.1| chromosome segregation protein SMC [Chloroflexus sp. Y-400-fl] Length = 1186 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI F+ F EF +T V G NG GKS+L++A+ W+ + Sbjct: 1 MYLKRLEIQGFKTFATRTVFEFQPGITAVVGPNGSGKSNLADAVRWVLGEQSMAALR 57 >gi|306819257|ref|ZP_07452968.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus mulieris ATCC 35239] gi|304648039|gb|EFM45353.1| SMC structural maintenance of chromosomes partitioning protein [Mobiluncus mulieris ATCC 35239] Length = 1199 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++ + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKNLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGQ 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|269977118|ref|ZP_06184092.1| chromosome segregation protein SMC [Mobiluncus mulieris 28-1] gi|269934949|gb|EEZ91509.1| chromosome segregation protein SMC [Mobiluncus mulieris 28-1] Length = 1199 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++ + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKNLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGQ 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|227875976|ref|ZP_03994099.1| possible SMC structural maintenance of chromosomes partitioning protein [Mobiluncus mulieris ATCC 35243] gi|307700127|ref|ZP_07637173.1| chromosome segregation protein SMC [Mobiluncus mulieris FB024-16] gi|227843508|gb|EEJ53694.1| possible SMC structural maintenance of chromosomes partitioning protein [Mobiluncus mulieris ATCC 35243] gi|307614676|gb|EFN93899.1| chromosome segregation protein SMC [Mobiluncus mulieris FB024-16] Length = 1199 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++ + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKNLTLKGFKSFANTVHMSLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGQ 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + KT P+ A Sbjct: 61 MSDVIFAGTKTKAPLGRA 78 >gi|121611377|ref|YP_999184.1| chromosome segregation protein SMC [Verminephrobacter eiseniae EF01-2] gi|121556017|gb|ABM60166.1| chromosome segregation protein SMC [Verminephrobacter eiseniae EF01-2] Length = 1175 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLSGFKSFAEPTTFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|19704464|ref|NP_604026.1| chromosome partition protein smc [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714732|gb|AAL95325.1| Chromosome partition protein smc [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 1193 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 11 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 70 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 71 SQDVIFSGGKEKKPATKA 88 >gi|294785315|ref|ZP_06750603.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 3_1_27] gi|294487029|gb|EFG34391.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 3_1_27] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|269955959|ref|YP_003325748.1| chromosome segregation protein SMC [Xylanimonas cellulosilytica DSM 15894] gi|269304640|gb|ACZ30190.1| chromosome segregation protein SMC [Xylanimonas cellulosilytica DSM 15894] Length = 1203 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ R G Sbjct: 1 MHLKTLTLRGFKSFASATTLSFEPGITCVVGPNGSGKSNVVDALAWVMGEQGARSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|290968346|ref|ZP_06559887.1| chromosome segregation protein SMC [Megasphaera genomosp. type_1 str. 28L] gi|290781621|gb|EFD94208.1| chromosome segregation protein SMC [Megasphaera genomosp. type_1 str. 28L] Length = 1185 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +++ +E+ F+ F + + F +T + G NG GKS++S+A+ W+ R+ G Sbjct: 1 MQVVKMELRGFKSFADKTVLTFDRGITAIVGPNGSGKSNISDAVRWVLGEQNVRQLRGQK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +A Sbjct: 61 AEDVIFSGTAQRRSQGVA 78 >gi|257440563|ref|ZP_05616318.1| putative cell division protein Smc [Faecalibacterium prausnitzii A2-165] gi|257196886|gb|EEU95170.1| putative cell division protein Smc [Faecalibacterium prausnitzii A2-165] Length = 1151 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++EI F+ F + KI F + +T V G NG GKS+LS+A+ W+ + R+ Sbjct: 1 MVFKELEIQGFKSFPDKVKITFDEGVTGVVGPNGSGKSNLSDAVRWVLGETSARQLR 57 >gi|254456403|ref|ZP_05069832.1| smc protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083405|gb|EDZ60831.1| smc protein [Candidatus Pelagibacter sp. HTCC7211] Length = 857 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++ F+ F + + LT + G NG GKS++ E++ W+ + + G Sbjct: 1 MEFKKIQLNGFKSFADKTNFLIEEGLTGIVGPNGCGKSNIVESLRWVMGETSAKSMRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254303024|ref|ZP_04970382.1| chromosome segregation ATPase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323216|gb|EDK88466.1| chromosome segregation ATPase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|256423704|ref|YP_003124357.1| chromosome segregation protein SMC [Chitinophaga pinensis DSM 2588] gi|256038612|gb|ACU62156.1| chromosome segregation protein SMC [Chitinophaga pinensis DSM 2588] Length = 1176 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +EI F+ F + + F + +T V G NG GKS++ ++I W+ + ++ Sbjct: 1 MRLKTLEIKGFKSFADKTVLHFDEGVTGVIGPNGCGKSNIIDSIRWVIGEHKISNLRSEN 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + KT MA Sbjct: 61 QSGLVFNGSKTRSASGMA 78 >gi|34763716|ref|ZP_00144638.1| Chromosome partition protein smc [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886517|gb|EAA23770.1| Chromosome partition protein smc [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 565 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 11 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 70 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 71 SQDVIFSGGKEKKPATKA 88 >gi|258544839|ref|ZP_05705073.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519944|gb|EEV88803.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 1128 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I ++ F+ F + LT + G NG GKS++ +A+ W+ ++ G + Sbjct: 1 MHLTAIRLAGFKSFADNTTFPVDAPLTGIIGPNGCGKSNIIDAVRWVLGETAAKQLRGQA 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|103487751|ref|YP_617312.1| chromosome segregation protein SMC [Sphingopyxis alaskensis RB2256] gi|98977828|gb|ABF53979.1| Chromosome segregation protein SMC [Sphingopyxis alaskensis RB2256] Length = 1147 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + ++ F+ F E ++ LT V G NG GKS+L EAI W+ + + G Sbjct: 1 MQIKRLRLTGFKSFVEPTELRIEPGLTGVVGPNGCGKSNLLEAIRWVMGESSPKSMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|330994665|ref|ZP_08318588.1| hypothetical protein SXCC_04553 [Gluconacetobacter sp. SXCC-1] gi|329758306|gb|EGG74827.1| hypothetical protein SXCC_04553 [Gluconacetobacter sp. SXCC-1] Length = 1511 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 + + + I+ F+ F + ++ LT + G NG GKS++ EA+ W+ R G Sbjct: 4 RFVRLRIAGFKSFADPVSVDILPGLTGIVGPNGCGKSNVVEALRWVMGETNARSLRGGEM 63 Query: 85 DSIKKRSIKTPMPMCMA 101 D + T MA Sbjct: 64 DDLIFAGTTTRAARNMA 80 >gi|292670932|ref|ZP_06604358.1| chromosome segregation protein Smc [Selenomonas noxia ATCC 43541] gi|292647553|gb|EFF65525.1| chromosome segregation protein Smc [Selenomonas noxia ATCC 43541] Length = 1187 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFAERIVVQFDRGITAVVGPNGSGKSNITDAVRWVLGEQNIRMLRGLR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + +A Sbjct: 61 SEDIIFSGSAARRALSVA 78 >gi|256845387|ref|ZP_05550845.1| chromosome segregation protein SMC [Fusobacterium sp. 3_1_36A2] gi|256718946|gb|EEU32501.1| chromosome segregation protein SMC [Fusobacterium sp. 3_1_36A2] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|237742052|ref|ZP_04572533.1| chromosome partition protein smc [Fusobacterium sp. 4_1_13] gi|229429700|gb|EEO39912.1| chromosome partition protein smc [Fusobacterium sp. 4_1_13] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|329936734|ref|ZP_08286441.1| chromosome associated protein [Streptomyces griseoaurantiacus M045] gi|329303964|gb|EGG47847.1| chromosome associated protein [Streptomyces griseoaurantiacus M045] Length = 1189 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|326776319|ref|ZP_08235584.1| chromosome segregation protein SMC [Streptomyces cf. griseus XylebKG-1] gi|326656652|gb|EGE41498.1| chromosome segregation protein SMC [Streptomyces cf. griseus XylebKG-1] Length = 1235 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|294631629|ref|ZP_06710189.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834962|gb|EFF93311.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 476 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|282861359|ref|ZP_06270424.1| chromosome segregation protein SMC [Streptomyces sp. ACTE] gi|282564017|gb|EFB69554.1| chromosome segregation protein SMC [Streptomyces sp. ACTE] Length = 1259 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|290957114|ref|YP_003488296.1| chromosome associated protein [Streptomyces scabiei 87.22] gi|260646640|emb|CBG69737.1| putative chromosome associated protein [Streptomyces scabiei 87.22] Length = 1207 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|320008307|gb|ADW03157.1| chromosome segregation protein SMC [Streptomyces flavogriseus ATCC 33331] Length = 1252 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302558155|ref|ZP_07310497.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302475773|gb|EFL38866.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 463 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302554413|ref|ZP_07306755.1| chromosome segregation protein SMC [Streptomyces viridochromogenes DSM 40736] gi|302472031|gb|EFL35124.1| chromosome segregation protein SMC [Streptomyces viridochromogenes DSM 40736] Length = 1201 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239991066|ref|ZP_04711730.1| putative chromosome segregation protein [Streptomyces roseosporus NRRL 11379] Length = 732 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239944604|ref|ZP_04696541.1| putative chromosome segregation protein [Streptomyces roseosporus NRRL 15998] gi|291448067|ref|ZP_06587457.1| chromosome segregation protein [Streptomyces roseosporus NRRL 15998] gi|291351014|gb|EFE77918.1| chromosome segregation protein [Streptomyces roseosporus NRRL 15998] Length = 1240 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297202630|ref|ZP_06920027.1| chromosome segregation protein SMC [Streptomyces sviceus ATCC 29083] gi|197713205|gb|EDY57239.1| chromosome segregation protein SMC [Streptomyces sviceus ATCC 29083] Length = 1201 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|182435694|ref|YP_001823413.1| putative chromosome segregation protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464210|dbj|BAG18730.1| putative chromosome segregation protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1235 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|29829200|ref|NP_823834.1| chromosome segregation protein [Streptomyces avermitilis MA-4680] gi|29606306|dbj|BAC70369.1| putative chromosome segregation protein [Streptomyces avermitilis MA-4680] Length = 1202 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|34499363|ref|NP_903578.1| chromosome segregation protein [Chromobacterium violaceum ATCC 12472] gi|34105213|gb|AAQ61569.1| probable chromosome segregation protein [Chromobacterium violaceum ATCC 12472] Length = 1162 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I L V G NG GKS++ +A+ W+ + ++ G+S Sbjct: 1 MRLTHIKLAGFKSFVDPTSIAVPGQLVAVIGPNGCGKSNVIDAVRWVLGESSAKQLRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ + P+ A Sbjct: 61 MQDVIFNGSSSRKPVSRA 78 >gi|21223933|ref|NP_629712.1| chromosome associated protein [Streptomyces coelicolor A3(2)] gi|256784967|ref|ZP_05523398.1| chromosome associated protein [Streptomyces lividans TK24] gi|4007736|emb|CAA22420.1| putative chromosome associated protein [Streptomyces coelicolor A3(2)] Length = 1186 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|237744820|ref|ZP_04575301.1| chromosome partition protein smc [Fusobacterium sp. 7_1] gi|229432049|gb|EEO42261.1| chromosome partition protein smc [Fusobacterium sp. 7_1] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|184200699|ref|YP_001854906.1| chromosome partition protein SMC [Kocuria rhizophila DC2201] gi|183580929|dbj|BAG29400.1| chromosome partition protein SMC [Kocuria rhizophila DC2201] Length = 1214 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTVRGFKSFASATTFHFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|325963726|ref|YP_004241632.1| condensin subunit Smc [Arthrobacter phenanthrenivorans Sphe3] gi|323469813|gb|ADX73498.1| condensin subunit Smc [Arthrobacter phenanthrenivorans Sphe3] Length = 1194 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTVRGFKSFASATTFNFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|161524423|ref|YP_001579435.1| chromosome segregation protein SMC [Burkholderia multivorans ATCC 17616] gi|160341852|gb|ABX14938.1| chromosome segregation protein SMC [Burkholderia multivorans ATCC 17616] Length = 1206 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Query: 3 RLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYG 62 R R + A S ++ +L I+++ F+ F + + L V G NG G Sbjct: 13 RARADSPRAARRCSFHLFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCG 72 Query: 63 KSSLSEAIEWLFYGYTQRRKHGDSIK---KRSIKTPMP 97 KS++ +A+ W+ G+S++ T P Sbjct: 73 KSNIIDAVRWVLGESRASELRGESMQDVIFNGSTTRKP 110 >gi|213964604|ref|ZP_03392804.1| chromosome segregation protein SMC [Corynebacterium amycolatum SK46] gi|213952797|gb|EEB64179.1| chromosome segregation protein SMC [Corynebacterium amycolatum SK46] Length = 1164 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MYLKSLTLKGFKSFASATTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEHSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|329113341|ref|ZP_08242122.1| Hypothetical protein APO_0105 [Acetobacter pomorum DM001] gi|326697166|gb|EGE48826.1| Hypothetical protein APO_0105 [Acetobacter pomorum DM001] Length = 1515 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + + I F+ F + +E LT + G NG GKS++ EA+ W+ + R G Sbjct: 1 MTVRFVRLRIVGFKSFADPVTVEILPGLTGIVGPNGCGKSNVVEALRWVMGESSARSLRG 60 Query: 85 DSIKKR 90 + Sbjct: 61 GEMDDL 66 >gi|258542169|ref|YP_003187602.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01] gi|256633247|dbj|BAH99222.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01] gi|256636306|dbj|BAI02275.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-03] gi|256639359|dbj|BAI05321.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-07] gi|256642415|dbj|BAI08370.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-22] gi|256645470|dbj|BAI11418.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-26] gi|256648523|dbj|BAI14464.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-32] gi|256651576|dbj|BAI17510.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654567|dbj|BAI20494.1| chromosome segregation protein SMC [Acetobacter pasteurianus IFO 3283-12] Length = 1515 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + + I F+ F + +E LT + G NG GKS++ EA+ W+ + R G Sbjct: 1 MTVRFVRLRIVGFKSFADPVTVEILPGLTGIVGPNGCGKSNVVEALRWVMGESSARSLRG 60 Query: 85 DSIKKR 90 + Sbjct: 61 GEMDDL 66 >gi|300311480|ref|YP_003775572.1| chromosome segregation SMC ATPase [Herbaspirillum seropedicae SmR1] gi|300074265|gb|ADJ63664.1| chromosome segregation SMC ATPase protein [Herbaspirillum seropedicae SmR1] Length = 1176 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLSGFKSFVEPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|256026552|ref|ZP_05440386.1| chromosome partition protein smc [Fusobacterium sp. D11] gi|289764560|ref|ZP_06523938.1| chromosome partition protein smc [Fusobacterium sp. D11] gi|289716115|gb|EFD80127.1| chromosome partition protein smc [Fusobacterium sp. D11] Length = 699 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|260494618|ref|ZP_05814748.1| chromosome segregation protein SMC [Fusobacterium sp. 3_1_33] gi|260197780|gb|EEW95297.1| chromosome segregation protein SMC [Fusobacterium sp. 3_1_33] Length = 1183 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F + I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGDKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 61 SQDVIFSGGKEKKPATKA 78 >gi|254252052|ref|ZP_04945370.1| SMC protein [Burkholderia dolosa AUO158] gi|124894661|gb|EAY68541.1| SMC protein [Burkholderia dolosa AUO158] Length = 1190 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A + +++ +L I+++ F+ F + + L V G NG GKS++ +A+ Sbjct: 5 ASRRRPFHTFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAV 64 Query: 71 EWLFYGYTQRRKHGDSIK---KRSIKTPMP 97 W+ G+S++ T P Sbjct: 65 RWVLGESRASELRGESMQDVIFNGSTTRKP 94 >gi|124267000|ref|YP_001021004.1| putative chromosome partition protein [Methylibium petroleiphilum PM1] gi|124259775|gb|ABM94769.1| putative chromosome partition protein [Methylibium petroleiphilum PM1] Length = 1175 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|189499472|ref|YP_001958942.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides BS1] gi|189494913|gb|ACE03461.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides BS1] Length = 1185 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F KI F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIELFGFKSFAHKVKITFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKTSLLRSSK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + P+ M+ Sbjct: 61 MESIIFNGSRKLKPLSMS 78 >gi|33597878|ref|NP_885521.1| putative chromosome partition protein [Bordetella parapertussis 12822] gi|33602781|ref|NP_890341.1| putative chromosome partition protein [Bordetella bronchiseptica RB50] gi|33574307|emb|CAE38640.1| putative chromosome partition protein [Bordetella parapertussis] gi|33577223|emb|CAE35780.1| putative chromosome partition protein [Bordetella bronchiseptica RB50] Length = 1195 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++Y R +L ++++ F+ F + I L V G NG GKS++ +A+ W+ Sbjct: 12 STYPVRHRTVRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEA 71 Query: 78 TQRRKHGDSIKK 89 G+S++ Sbjct: 72 KASELRGESMQD 83 >gi|294340193|emb|CAZ88565.1| putative Structural maintenance of chromosome protein SMC [Thiomonas sp. 3As] Length = 1177 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + ++ F+ F E + F ++ + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSLRLAGFKSFAEPVTLPFPGRISGIVGPNGCGKSNVIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|296135972|ref|YP_003643214.1| chromosome segregation protein SMC [Thiomonas intermedia K12] gi|295796094|gb|ADG30884.1| chromosome segregation protein SMC [Thiomonas intermedia K12] Length = 1177 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + ++ F+ F E + F ++ + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSLRLAGFKSFAEPVTLPFPGRISGIVGPNGCGKSNVIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|328885319|emb|CCA58558.1| Chromosome partition protein smc [Streptomyces venezuelae ATCC 10712] Length = 1193 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 12 VHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 71 Query: 87 IKK 89 ++ Sbjct: 72 MED 74 >gi|289768859|ref|ZP_06528237.1| chromosome segregation protein SMC [Streptomyces lividans TK24] gi|289699058|gb|EFD66487.1| chromosome segregation protein SMC [Streptomyces lividans TK24] Length = 1197 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 12 VHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 71 Query: 87 IKK 89 ++ Sbjct: 72 MED 74 >gi|239928699|ref|ZP_04685652.1| chromosome associated protein [Streptomyces ghanaensis ATCC 14672] Length = 499 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 15 VHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 74 Query: 87 IKK 89 ++ Sbjct: 75 MED 77 >gi|318076728|ref|ZP_07984060.1| putative chromosome segregation protein [Streptomyces sp. SA3_actF] Length = 470 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302522142|ref|ZP_07274484.1| chromosome segregation protein SMC [Streptomyces sp. SPB78] gi|302431037|gb|EFL02853.1| chromosome segregation protein SMC [Streptomyces sp. SPB78] Length = 1298 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|152965358|ref|YP_001361142.1| chromosome segregation protein SMC [Kineococcus radiotolerans SRS30216] gi|151359875|gb|ABS02878.1| chromosome segregation protein SMC [Kineococcus radiotolerans SRS30216] Length = 1191 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MHLKTLTLKGFKSFASATTLRLQPGITCVVGPNGSGKSNVVDALTWVMGEHSAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|257452570|ref|ZP_05617869.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] gi|317059110|ref|ZP_07923595.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] gi|313684786|gb|EFS21621.1| chromosome partition protein smc [Fusobacterium sp. 3_1_5R] Length = 1172 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +E+ F+ F E IEF +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEVHGFKSFGEKVYIEFNQGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K M A Sbjct: 61 SQDVIFSGGKDKKAMNQA 78 >gi|284105821|ref|ZP_06386225.1| chromosome segregation protein SMC [Candidatus Poribacteria sp. WGA-A3] gi|283830108|gb|EFC34374.1| chromosome segregation protein SMC [Candidatus Poribacteria sp. WGA-A3] Length = 1216 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + +S F+ F E +++F +T V G NG GKS++ +AI W+ + + + Sbjct: 1 MKLKSLLVSGFKSFPE-ARLDFPQGITAVVGPNGVGKSNVVDAILWVLGEQSTKALRSER 59 Query: 87 I---KKRSIKTPMPMCMA 101 + ++ P+ MA Sbjct: 60 MEDVIFNGTESRKPLSMA 77 >gi|257466429|ref|ZP_05630740.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] gi|315917585|ref|ZP_07913825.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] gi|313691460|gb|EFS28295.1| chromosome partition protein smc [Fusobacterium gonidiaformans ATCC 25563] Length = 1172 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +E+ F+ F E IEF +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEVHGFKSFGEKVYIEFNQGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K M A Sbjct: 61 SQDVIFSGGKDKKAMNQA 78 >gi|254247877|ref|ZP_04941198.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gi|124872653|gb|EAY64369.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] Length = 1218 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +++ +L I+++ F+ F + + L V G NG GKS++ +A+ W+ Sbjct: 8 TFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESR 67 Query: 79 QRRKHGDSIKK 89 G+S++ Sbjct: 68 ASELRGESMQD 78 >gi|160934420|ref|ZP_02081807.1| hypothetical protein CLOLEP_03293 [Clostridium leptum DSM 753] gi|156867093|gb|EDO60465.1| hypothetical protein CLOLEP_03293 [Clostridium leptum DSM 753] Length = 1190 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ F+ F + K+ F +T V G NG GKS++S+AI W+ + + Sbjct: 1 MLLKSLKLQGFKTFPDQTKLSFGPGITAVVGPNGSGKSNISDAIRWVLGEQSCKTLRCSR 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239831369|ref|ZP_04679698.1| chromosome segregation protein SMC [Ochrobactrum intermedium LMG 3301] gi|239823636|gb|EEQ95204.1| chromosome segregation protein SMC [Ochrobactrum intermedium LMG 3301] Length = 1164 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+L+ + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 8 GRRLLMRFSKLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKN 67 Query: 82 KHG---DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 68 MRASGMDDVIFSGSATRPARNTA 90 >gi|160899027|ref|YP_001564609.1| chromosome segregation protein SMC [Delftia acidovorans SPH-1] gi|160364611|gb|ABX36224.1| chromosome segregation protein SMC [Delftia acidovorans SPH-1] Length = 1204 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +L I++S F+ F E L V G NG GKS++ +A+ W+ G+ Sbjct: 29 IVRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGE 88 Query: 86 SIKK 89 S++ Sbjct: 89 SMQD 92 >gi|302338382|ref|YP_003803588.1| chromosome segregation protein SMC [Spirochaeta smaragdinae DSM 11293] gi|301635567|gb|ADK80994.1| chromosome segregation protein SMC [Spirochaeta smaragdinae DSM 11293] Length = 941 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I F+ F + IEF D ++ + G NG GKS++ ++I+W+ + + + Sbjct: 1 MFLKSIQIFGFKSFADRSVIEFRDGISALLGPNGCGKSNVVDSIKWVLGEQSTKTLRAEK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + + + +A Sbjct: 61 MEDVIFNGTENRKALNVA 78 >gi|255021567|ref|ZP_05293610.1| Chromosome partition protein smc [Acidithiobacillus caldus ATCC 51756] gi|254968955|gb|EET26474.1| Chromosome partition protein smc [Acidithiobacillus caldus ATCC 51756] Length = 1154 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I + F+ F E +I + ++ G NG GKS++ +AI W+ + R+ G Sbjct: 1 MRLSAIRLHGFKSFRERTQIRLEANPVVIVGPNGCGKSNIVDAIRWVLGESSARQLRGAQ 60 Query: 87 IKK 89 + Sbjct: 61 MVD 63 >gi|38234115|ref|NP_939882.1| putative chromosome partition protein [Corynebacterium diphtheriae NCTC 13129] gi|28375459|emb|CAD66593.1| SMC protein [Corynebacterium diphtheriae] gi|38200377|emb|CAE50065.1| Putative chromosome partition protein [Corynebacterium diphtheriae] Length = 1161 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALSWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|299140099|ref|ZP_07033268.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX8] gi|298597945|gb|EFI54114.1| chromosome segregation protein SMC [Acidobacterium sp. MP5ACTX8] Length = 1296 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL ++I F+ F + +++ + + G NG GKS++S+AI W+ + + G Sbjct: 1 MLKLKKVQILGFKSFCDRTEVQLTGQGIAAIVGPNGCGKSNISDAITWVLGEQSAKSLRG 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + + P MA Sbjct: 61 IKMEDVIFAGTRDRKPTGMA 80 >gi|259507583|ref|ZP_05750483.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164762|gb|EEW49316.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 670 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|145296029|ref|YP_001138850.1| hypothetical protein cgR_1952 [Corynebacterium glutamicum R] gi|140845949|dbj|BAF54948.1| hypothetical protein [Corynebacterium glutamicum R] Length = 1155 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|25028528|ref|NP_738582.1| putative chromosome segregation SMC protein [Corynebacterium efficiens YS-314] gi|23493813|dbj|BAC18782.1| putative chromosome segregation SMC protein [Corynebacterium efficiens YS-314] Length = 1169 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|19553265|ref|NP_601267.1| chromosome segregation ATPase [Corynebacterium glutamicum ATCC 13032] gi|62390901|ref|YP_226303.1| chromosome segregation ATPase [Corynebacterium glutamicum ATCC 13032] gi|21324835|dbj|BAB99458.1| Chromosome segregation ATPases [Corynebacterium glutamicum ATCC 13032] gi|41326240|emb|CAF20402.1| Chromosome segregation ATPase [Corynebacterium glutamicum ATCC 13032] Length = 1155 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|71894686|ref|YP_278794.1| putative ABC transporter ATP-binding protein P115-like [Mycoplasma synoviae 53] gi|71851474|gb|AAZ44083.1| putative ABC transporter ATP-binding protein P115-like protein [Mycoplasma synoviae 53] Length = 980 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ IE F+ F + ++F + + G NG GKS++++AI+W+ + + G+S Sbjct: 1 MKLIKIEAHGFKSFADPISLKFDGGVIAIIGPNGSGKSNINDAIKWVLGEQSSKELRGNS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + KT M A Sbjct: 61 MSDVIFSGSKTAKAMDFA 78 >gi|114799181|ref|YP_760618.1| chromosome segregation protein SMC [Hyphomonas neptunium ATCC 15444] gi|114739355|gb|ABI77480.1| chromosome segregation protein SMC [Hyphomonas neptunium ATCC 15444] Length = 1153 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ I+ F+ F + Q + LT + G NG GKS+L EA+ W + + G Sbjct: 1 MQITELRIAGFKSFVDPQTVPIEPGLTGIVGPNGCGKSNLLEALRWAMGANSAKAMRGGE 60 Query: 87 IKKR 90 + Sbjct: 61 MDDL 64 >gi|304316937|ref|YP_003852082.1| chromosome segregation protein SMC [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778439|gb|ADL68998.1| chromosome segregation protein SMC [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 1183 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + + F +T + G NG GKS++S+A+ + + + G Sbjct: 1 MFLKRLEIIGFKSFADKVVLNFEKGITAIVGPNGSGKSNISDAVRLVLGEQSIKSLRGNK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 LEDVIFVGTDKRKPLSFA 78 >gi|187477569|ref|YP_785593.1| chromosome partition protein [Bordetella avium 197N] gi|115422155|emb|CAJ48679.1| putative chromosome partition protein [Bordetella avium 197N] Length = 1198 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++Y R +L ++++ F+ F + I L V G NG GKS++ +A+ W+ Sbjct: 14 STYPVRHPTVRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEA 73 Query: 78 TQRRKHGDSIKK 89 G+S++ Sbjct: 74 KASELRGESMQD 85 >gi|319762936|ref|YP_004126873.1| chromosome segregation protein smc [Alicycliphilus denitrificans BC] gi|330825016|ref|YP_004388319.1| chromosome segregation protein SMC [Alicycliphilus denitrificans K601] gi|317117497|gb|ADU99985.1| chromosome segregation protein SMC [Alicycliphilus denitrificans BC] gi|329310388|gb|AEB84803.1| chromosome segregation protein SMC [Alicycliphilus denitrificans K601] Length = 1174 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFAEPTNFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|241764428|ref|ZP_04762452.1| chromosome segregation protein SMC [Acidovorax delafieldii 2AN] gi|241366170|gb|EER60747.1| chromosome segregation protein SMC [Acidovorax delafieldii 2AN] Length = 1174 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|304436510|ref|ZP_07396484.1| possible chromosome segregation protein Smc [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370556|gb|EFM24207.1| possible chromosome segregation protein Smc [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 1186 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFAERIVVQFDQGITAVVGPNGSGKSNITDAVRWVLGEQNIRMLRGLR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + +A Sbjct: 61 AEDIIFAGSSARRALSVA 78 >gi|238926794|ref|ZP_04658554.1| chromosome segregation protein Smc [Selenomonas flueggei ATCC 43531] gi|238885326|gb|EEQ48964.1| chromosome segregation protein Smc [Selenomonas flueggei ATCC 43531] Length = 1186 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L +E F+ F E ++F +T V G NG GKS++++A+ W+ R G Sbjct: 1 MQLKRLEAYGFKSFAERIVVQFDQGITAVVGPNGSGKSNITDAVRWVLGEQNIRMLRGLR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + I + +A Sbjct: 61 AEDIIFAGSSARRALSVA 78 >gi|332670006|ref|YP_004453014.1| chromosome segregation protein SMC [Cellulomonas fimi ATCC 484] gi|332339044|gb|AEE45627.1| chromosome segregation protein SMC [Cellulomonas fimi ATCC 484] Length = 1186 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTLRGFKSFASATTLTFEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|307729325|ref|YP_003906549.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003] gi|307583860|gb|ADN57258.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|323526496|ref|YP_004228649.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001] gi|323383498|gb|ADX55589.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|295676831|ref|YP_003605355.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1002] gi|295436674|gb|ADG15844.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1002] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|262037744|ref|ZP_06011186.1| chromosome segregation protein SMC [Leptotrichia goodfellowii F0264] gi|261748216|gb|EEY35613.1| chromosome segregation protein SMC [Leptotrichia goodfellowii F0264] Length = 1176 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +E++ F+ F + +EF +T + G NG GKS++ +AI W+ + + Sbjct: 1 MHLKALELAGFKSFADKTVVEFNRGITSIVGPNGSGKSNILDAILWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K MA Sbjct: 61 SSDVIFSGGKNKKAKSMA 78 >gi|209521615|ref|ZP_03270311.1| chromosome segregation protein SMC [Burkholderia sp. H160] gi|209497942|gb|EDZ98101.1| chromosome segregation protein SMC [Burkholderia sp. H160] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|170692134|ref|ZP_02883297.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M] gi|170142564|gb|EDT10729.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|186476104|ref|YP_001857574.1| chromosome segregation protein SMC [Burkholderia phymatum STM815] gi|184192563|gb|ACC70528.1| chromosome segregation protein SMC [Burkholderia phymatum STM815] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|17221403|emb|CAD10419.2| SMC protein [Burkholderia cepacia] Length = 1172 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|206900328|ref|YP_002250664.1| chromosome segregation SMC protein, putative [Dictyoglomus thermophilum H-6-12] gi|206739431|gb|ACI18489.1| chromosome segregation SMC protein, putative [Dictyoglomus thermophilum H-6-12] Length = 1084 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 33/61 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E+++F+ F KI F+ + T++ G NG GKS++ +AI W+ + + Sbjct: 1 MIYLKSLELTNFKSFIGNNKIPFSQNFTVITGPNGSGKSNILDAIRWVLGEQRVKTLRAE 60 Query: 86 S 86 Sbjct: 61 K 61 >gi|316935990|ref|YP_004110972.1| chromosome segregation protein SMC [Rhodopseudomonas palustris DX-1] gi|315603704|gb|ADU46239.1| chromosome segregation protein SMC [Rhodopseudomonas palustris DX-1] Length = 1154 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRATD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|192293342|ref|YP_001993947.1| chromosome segregation protein SMC [Rhodopseudomonas palustris TIE-1] gi|192287091|gb|ACF03472.1| chromosome segregation protein SMC [Rhodopseudomonas palustris TIE-1] Length = 1154 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRATD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|86748191|ref|YP_484687.1| chromosome segregation protein SMC [Rhodopseudomonas palustris HaA2] gi|86571219|gb|ABD05776.1| condensin subunit Smc [Rhodopseudomonas palustris HaA2] Length = 1154 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRATD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|39937549|ref|NP_949825.1| chromosome segregation protein SMC [Rhodopseudomonas palustris CGA009] gi|39651408|emb|CAE29930.1| putative chromosome segregation SMC protein [Rhodopseudomonas palustris CGA009] Length = 1177 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 24 MKLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRATD 83 Query: 87 I 87 + Sbjct: 84 M 84 >gi|225872359|ref|YP_002753814.1| chromosome segregation protein SMC [Acidobacterium capsulatum ATCC 51196] gi|225794128|gb|ACO34218.1| chromosome segregation protein SMC [Acidobacterium capsulatum ATCC 51196] Length = 1303 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL I+I F+ F + ++ + + +V G NG GKS++ + + W+ + + G Sbjct: 1 MLKLKKIQILGFKSFCDRTEVALPGNGIAVVVGPNGCGKSNILDGVTWVLGEQSAKTLRG 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + ++ P+ MA Sbjct: 61 GKMEDVIFAGTRSRKPLGMA 80 >gi|193222296|emb|CAL61499.2| Chromosome segregation protein SMC [Herminiimonas arsenicoxydans] Length = 1175 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLSGFKSFVDPTNFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGTNTRKP 74 >gi|326443710|ref|ZP_08218444.1| chromosome segregation protein [Streptomyces clavuligerus ATCC 27064] Length = 1376 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297191809|ref|ZP_06909207.1| chromosome segregation protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151081|gb|EDY65907.2| chromosome segregation protein [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239982555|ref|ZP_04705079.1| chromosome segregation protein [Streptomyces albus J1074] gi|291454397|ref|ZP_06593787.1| chromosome segregation protein SMC [Streptomyces albus J1074] gi|291357346|gb|EFE84248.1| chromosome segregation protein SMC [Streptomyces albus J1074] Length = 553 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|238063287|ref|ZP_04607996.1| chromosome segregation protein SMC [Micromonospora sp. ATCC 39149] gi|237885098|gb|EEP73926.1| chromosome segregation protein SMC [Micromonospora sp. ATCC 39149] Length = 724 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T V G NG GKS++ +AI W+ + G Sbjct: 1 MYLKSLTVKGFKSFASATTLKLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|325295627|ref|YP_004282141.1| chromosome segregation protein SMC [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066075|gb|ADY74082.1| chromosome segregation protein SMC [Desulfurobacterium thermolithotrophum DSM 11699] Length = 1168 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ F+ F + +I F+ + + G NG GKS++ +A++W+ + + + Sbjct: 1 MFIKSLKLKGFKSFADETEIRFSKGINCIVGPNGCGKSNIVDALKWIVGDTSIKGMRASN 60 Query: 87 IKK 89 IK Sbjct: 61 IKD 63 >gi|114319840|ref|YP_741523.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] gi|114226234|gb|ABI56033.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] Length = 1168 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + ++ L V G NG GKS++ +A+ W+ + R G S Sbjct: 1 MRLKKIKLSGFKSFVDPTQVAMPGDLVAVVGPNGCGKSNIIDAVRWVMGESSARHLRGQS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MADVIFNGSTARKPVSHA 78 >gi|317125425|ref|YP_004099537.1| condensin subunit Smc [Intrasporangium calvum DSM 43043] gi|315589513|gb|ADU48810.1| condensin subunit Smc [Intrasporangium calvum DSM 43043] Length = 1197 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F + +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYVKSLTLKGFKSFASATHLRLEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|116330711|ref|YP_800429.1| chromosome segregation ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124400|gb|ABJ75671.1| Chromosome segregation ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 924 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + I F+ F + +I T V G NG GKS++ +A++W+F + + G Sbjct: 1 MYLKSLNIVGFKTFADETEILLDPGFTAVVGPNGSGKSNIVDAVKWVFGEKSAKGLRGEK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + + P A Sbjct: 61 MDDVIFHGSEARKPAGYA 78 >gi|116328632|ref|YP_798352.1| chromosome segregation ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121376|gb|ABJ79419.1| Chromosome segregation ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 924 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + I F+ F + +I T V G NG GKS++ +A++W+F + + G Sbjct: 1 MYLKSLNIVGFKTFADETEILLDPGFTAVVGPNGSGKSNIVDAVKWVFGEKSAKGLRGEK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + + P A Sbjct: 61 MDDVIFHGSEARKPAGYA 78 >gi|325067015|ref|ZP_08125688.1| chromosome segregation protein SMC [Actinomyces oris K20] Length = 194 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLKTLTIKGFKSFASSTTLRLEPGITAVVGPNGSGKSNVVDALTWVMGEQGAKNLRGGS 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|320534862|ref|ZP_08035279.1| RecF/RecN/SMC protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320132960|gb|EFW25491.1| RecF/RecN/SMC protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 395 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLKTLTIKGFKSFASSTTLRLEPGITAVVGPNGSGKSNVVDALTWVMGEQGAKNLRGGS 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|188581835|ref|YP_001925280.1| SMC domain protein [Methylobacterium populi BJ001] gi|179345333|gb|ACB80745.1| SMC domain protein [Methylobacterium populi BJ001] Length = 687 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 37/64 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E+ FRGF E Q+++F T++ G+NG GKS+L +A+E+ G + + Sbjct: 1 MRLDYLELCGFRGFRERQRVDFGPGFTVICGRNGVGKSTLCDAVEFAVTGQIDKYLVDKA 60 Query: 87 IKKR 90 ++ Sbjct: 61 ARES 64 >gi|152979902|ref|YP_001353757.1| chromosome segregation protein [Janthinobacterium sp. Marseille] gi|151279979|gb|ABR88389.1| chromosome segregation protein [Janthinobacterium sp. Marseille] Length = 1175 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTSIKLSGFKSFVDPTNFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|325518141|gb|EGC97924.1| chromosome segregation protein SMC [Burkholderia sp. TJI49] Length = 594 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 S ++ +L I+++ F+ F + + L V G NG GKS++ +A+ W+ Sbjct: 21 SFHLFFTSDTAVRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLG 80 Query: 76 GYTQRRKHGDSIKK 89 G+S++ Sbjct: 81 ESRASELRGESMQD 94 >gi|91762755|ref|ZP_01264720.1| chromosome segregation protein SMC family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718557|gb|EAS85207.1| chromosome segregation protein SMC family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 857 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++ F+ F E LT + G NG GKS++ E++ W+ + + G Sbjct: 1 MEFKKIQLNGFKSFAEKTNFLIEHGLTGIVGPNGCGKSNIVESLRWVMGETSAKSMRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|145589638|ref|YP_001156235.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048044|gb|ABP34671.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1173 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F + E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MQLKSIKLSGFKSFVDPTHFEMPGQLIGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|71082822|ref|YP_265541.1| SMC family chromosome segregation protein [Candidatus Pelagibacter ubique HTCC1062] gi|71061935|gb|AAZ20938.1| chromosome segregation protein SMC family [Candidatus Pelagibacter ubique HTCC1062] Length = 857 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++ F+ F E LT + G NG GKS++ E++ W+ + + G Sbjct: 1 MEFKKIQLNGFKSFAEKTNFLIEHGLTGIVGPNGCGKSNIVESLRWVMGETSAKSMRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|91975674|ref|YP_568333.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisB5] gi|91682130|gb|ABE38432.1| condensin subunit Smc [Rhodopseudomonas palustris BisB5] Length = 1154 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|297571143|ref|YP_003696917.1| chromosome segregation protein SMC [Arcanobacterium haemolyticum DSM 20595] gi|296931490|gb|ADH92298.1| chromosome segregation protein SMC [Arcanobacterium haemolyticum DSM 20595] Length = 1184 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F + V G NG GKS++ +A+ W+ + G + Sbjct: 1 MHLKTLTLRGFKSFASQTTLHFEPGINCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGN 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|119356341|ref|YP_910985.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides DSM 266] gi|119353690|gb|ABL64561.1| chromosome segregation protein SMC [Chlorobium phaeobacteroides DSM 266] Length = 1179 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ F+ F I+F LT + G NG GK+++ +AI W+ + Sbjct: 1 MYLSKIELFGFKSFAHRVTIKFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSSLLRSEK 60 Query: 87 I---KKRSIKTPMPMCM 100 + K P+ + Sbjct: 61 MENIIFNGSKNLKPLSL 77 >gi|306819821|ref|ZP_07453476.1| possible chromosome segregation protein Smc [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552190|gb|EFM40126.1| possible chromosome segregation protein Smc [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 1177 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IEI F+ F + I + + G NG GKS++ +AI W+ + + + Sbjct: 1 MYLKAIEIRGFKSFMDKTVINLPRGMISIVGPNGSGKSNILDAIRWVLGEQSVKSLRSEK 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ K+ + MC Sbjct: 61 MQDVIFAGTQSKSQLGMC 78 >gi|312622589|ref|YP_004024202.1| chromosome segregation protein smc [Caldicellulosiruptor kronotskyensis 2002] gi|312203056|gb|ADQ46383.1| chromosome segregation protein SMC [Caldicellulosiruptor kronotskyensis 2002] Length = 1177 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFEKGITAIVGPNGCGKSNITDAIRWALGEQSLKLLR 57 >gi|329850283|ref|ZP_08265128.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19] gi|328840598|gb|EGF90169.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19] Length = 1156 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + I++S F+ F + + LT + G NG GKS+L EA+ W+ + + G Sbjct: 1 MQFQKIKLSGFKSFVDATEFRIDPGLTGIVGPNGCGKSNLLEALRWVMGATSAKAMRGAG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + A Sbjct: 61 MDDVIFAGSDKRPSRNWA 78 >gi|302878910|ref|YP_003847474.1| chromosome segregation protein SMC [Gallionella capsiferriformans ES-2] gi|302581699|gb|ADL55710.1| chromosome segregation protein SMC [Gallionella capsiferriformans ES-2] Length = 1156 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I+ + V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSQIKLAGFKSFVDPTTIDLPGQIVGVVGPNGCGKSNVIDALRWVLGESRASALRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|319943833|ref|ZP_08018114.1| chromosome segregation protein SMC [Lautropia mirabilis ATCC 51599] gi|319743066|gb|EFV95472.1| chromosome segregation protein SMC [Lautropia mirabilis ATCC 51599] Length = 1205 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +++ +L ++++ F+ F + E L + G NG GKS++ +A W+ Sbjct: 23 QRVFVRLKQVKLAGFKSFCDPTTFELPSQLVGIVGPNGCGKSNIIDATRWVLGESRATEL 82 Query: 83 HGDSIKK 89 G+S++ Sbjct: 83 RGESMQD 89 >gi|302036230|ref|YP_003796552.1| putative chromosome segregation protein Smc [Candidatus Nitrospira defluvii] gi|300604294|emb|CBK40626.1| putative Chromosome segregation protein Smc [Candidatus Nitrospira defluvii] Length = 1227 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ F E KI+F +T + G NG GKS++ ++I W+ + + + Sbjct: 1 MYLKSLEMLGFKSFAE-AKIQFPKGITAIVGPNGSGKSNVVDSILWVLGEQSTKTLRSEK 59 Query: 87 I---KKRSIKTPMPMCM 100 + + P+ + Sbjct: 60 MEDVIFNGTEVRKPLGL 76 >gi|313114997|ref|ZP_07800490.1| segregation protein SMC [Faecalibacterium cf. prausnitzii KLE1255] gi|310622688|gb|EFQ06150.1| segregation protein SMC [Faecalibacterium cf. prausnitzii KLE1255] Length = 1185 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++EI F+ F + KI F +T V G NG GKS+LS+A+ W+ + R+ Sbjct: 1 MVFKELEIQGFKSFPDKVKIRFDAGVTGVVGPNGSGKSNLSDAVRWVLGETSSRQLR 57 >gi|227543202|ref|ZP_03973251.1| possible SMC structural partitioning protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181011|gb|EEI61983.1| possible SMC structural partitioning protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 1138 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F ++F + V G NG GKS++ +A+ W+ ++ G Sbjct: 1 MYLKSLTLKGFKSFASATTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKQLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFAGAGSRKPLGRA 78 >gi|227488598|ref|ZP_03918914.1| possible chromosome segregation protein Smc [Corynebacterium glucuronolyticum ATCC 51867] gi|227091492|gb|EEI26804.1| possible chromosome segregation protein Smc [Corynebacterium glucuronolyticum ATCC 51867] Length = 1138 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F ++F + V G NG GKS++ +A+ W+ ++ G Sbjct: 1 MYLKSLTLKGFKSFASATTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKQLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 MEDVIFAGAGSRKPLGRA 78 >gi|254392453|ref|ZP_05007633.1| chromosome segregation protein [Streptomyces clavuligerus ATCC 27064] gi|197706120|gb|EDY51932.1| chromosome segregation protein [Streptomyces clavuligerus ATCC 27064] Length = 665 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 8 VHLKAMTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK 67 Query: 87 IKK 89 ++ Sbjct: 68 MED 70 >gi|218666509|ref|YP_002425241.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 23270] gi|28374984|emb|CAD66591.1| SMC protein [Acidithiobacillus ferrooxidans] gi|218518722|gb|ACK79308.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1150 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I + F+ F E +I+F + ++ G NG GKS+ +A+ W+ + R+ G + Sbjct: 1 MRLSAIILQGFKSFRESTRIQFNANPVVIIGPNGCGKSNTVDAVRWVLGESSARQLRGGT 60 Query: 87 IKK 89 + Sbjct: 61 LSD 63 >gi|222529160|ref|YP_002573042.1| chromosome segregation protein SMC [Caldicellulosiruptor bescii DSM 6725] gi|222456007|gb|ACM60269.1| chromosome segregation protein SMC [Caldicellulosiruptor bescii DSM 6725] Length = 1177 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFEKGITAIVGPNGCGKSNITDAIRWALGEQSLKLLR 57 >gi|46205999|ref|ZP_00047825.2| COG1196: Chromosome segregation ATPases [Magnetospirillum magnetotacticum MS-1] Length = 191 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTLRGFKSFASATTLSFEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|170744955|ref|YP_001773610.1| chromosome segregation protein SMC [Methylobacterium sp. 4-46] gi|168199229|gb|ACA21176.1| chromosome segregation protein SMC [Methylobacterium sp. 4-46] Length = 1144 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I F+ F E ++ LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MRLTRLRIVGFKTFVEPSEVPIEPGLTGIIGPNGCGKSNLVEALRWVMGESSHKSLRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|330817446|ref|YP_004361151.1| Chromosome segregation protein SMC [Burkholderia gladioli BSR3] gi|327369839|gb|AEA61195.1| Chromosome segregation protein SMC [Burkholderia gladioli BSR3] Length = 1172 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|221198331|ref|ZP_03571377.1| chromosome segregation protein SMC [Burkholderia multivorans CGD2M] gi|221208270|ref|ZP_03581274.1| chromosome segregation protein SMC [Burkholderia multivorans CGD2] gi|221171918|gb|EEE04361.1| chromosome segregation protein SMC [Burkholderia multivorans CGD2] gi|221182263|gb|EEE14664.1| chromosome segregation protein SMC [Burkholderia multivorans CGD2M] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|221215449|ref|ZP_03588413.1| chromosome segregation protein SMC [Burkholderia multivorans CGD1] gi|221164633|gb|EED97115.1| chromosome segregation protein SMC [Burkholderia multivorans CGD1] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|217421919|ref|ZP_03453423.1| chromosome segregation protein SMC [Burkholderia pseudomallei 576] gi|217395661|gb|EEC35679.1| chromosome segregation protein SMC [Burkholderia pseudomallei 576] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|189350822|ref|YP_001946450.1| chromosome segregation protein [Burkholderia multivorans ATCC 17616] gi|189334844|dbj|BAG43914.1| chromosome segregation protein [Burkholderia multivorans ATCC 17616] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|167919524|ref|ZP_02506615.1| chromosome segregation protein SMC [Burkholderia pseudomallei BCC215] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|167824773|ref|ZP_02456244.1| chromosome segregation protein SMC [Burkholderia pseudomallei 9] Length = 461 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|254197610|ref|ZP_04904032.1| chromosome segregation protein SMC [Burkholderia pseudomallei S13] gi|254260706|ref|ZP_04951760.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1710a] gi|254297199|ref|ZP_04964652.1| chromosome segregation protein SMC [Burkholderia pseudomallei 406e] gi|157806972|gb|EDO84142.1| chromosome segregation protein SMC [Burkholderia pseudomallei 406e] gi|169654351|gb|EDS87044.1| chromosome segregation protein SMC [Burkholderia pseudomallei S13] gi|254219395|gb|EET08779.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1710a] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|254178460|ref|ZP_04885115.1| chromosome segregation protein SMC [Burkholderia mallei ATCC 10399] gi|254358097|ref|ZP_04974370.1| chromosome segregation protein SMC [Burkholderia mallei 2002721280] gi|148027224|gb|EDK85245.1| chromosome segregation protein SMC [Burkholderia mallei 2002721280] gi|160699499|gb|EDP89469.1| chromosome segregation protein SMC [Burkholderia mallei ATCC 10399] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|134277275|ref|ZP_01763990.1| chromosome segregation protein SMC [Burkholderia pseudomallei 305] gi|134250925|gb|EBA51004.1| chromosome segregation protein SMC [Burkholderia pseudomallei 305] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|126451882|ref|YP_001066761.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1106a] gi|167846303|ref|ZP_02471811.1| chromosome segregation protein SMC [Burkholderia pseudomallei B7210] gi|167911514|ref|ZP_02498605.1| chromosome segregation protein SMC [Burkholderia pseudomallei 112] gi|226198947|ref|ZP_03794510.1| chromosome segregation protein SMC [Burkholderia pseudomallei Pakistan 9] gi|242316745|ref|ZP_04815761.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1106b] gi|254179312|ref|ZP_04885911.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1655] gi|254189301|ref|ZP_04895812.1| chromosome segregation protein SMC [Burkholderia pseudomallei Pasteur 52237] gi|126225524|gb|ABN89064.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1106a] gi|157936980|gb|EDO92650.1| chromosome segregation protein SMC [Burkholderia pseudomallei Pasteur 52237] gi|184209852|gb|EDU06895.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1655] gi|225929047|gb|EEH25071.1| chromosome segregation protein SMC [Burkholderia pseudomallei Pakistan 9] gi|242139984|gb|EES26386.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1106b] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|126441375|ref|YP_001059478.1| chromosome segregation protein SMC [Burkholderia pseudomallei 668] gi|167903273|ref|ZP_02490478.1| chromosome segregation protein SMC [Burkholderia pseudomallei NCTC 13177] gi|237812817|ref|YP_002897268.1| chromosome segregation protein SMC [Burkholderia pseudomallei MSHR346] gi|126220868|gb|ABN84374.1| chromosome segregation protein SMC [Burkholderia pseudomallei 668] gi|237504726|gb|ACQ97044.1| chromosome segregation protein SMC [Burkholderia pseudomallei MSHR346] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|124385298|ref|YP_001029182.1| chromosome segregation protein SMC [Burkholderia mallei NCTC 10229] gi|124293318|gb|ABN02587.1| chromosome segregation protein SMC [Burkholderia mallei NCTC 10229] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|115526436|ref|YP_783347.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisA53] gi|115520383|gb|ABJ08367.1| condensin subunit Smc [Rhodopseudomonas palustris BisA53] Length = 1154 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|53723747|ref|YP_103203.1| chromosome segregation protein SMC [Burkholderia mallei ATCC 23344] gi|238563758|ref|ZP_00438346.2| chromosome segregation protein SMC [Burkholderia mallei GB8 horse 4] gi|254200155|ref|ZP_04906521.1| chromosome segregation protein SMC [Burkholderia mallei FMH] gi|254206494|ref|ZP_04912846.1| chromosome segregation protein SMC [Burkholderia mallei JHU] gi|52427170|gb|AAU47763.1| chromosome segregation protein SMC [Burkholderia mallei ATCC 23344] gi|147749751|gb|EDK56825.1| chromosome segregation protein SMC [Burkholderia mallei FMH] gi|147753937|gb|EDK61002.1| chromosome segregation protein SMC [Burkholderia mallei JHU] gi|238520042|gb|EEP83506.1| chromosome segregation protein SMC [Burkholderia mallei GB8 horse 4] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|53719775|ref|YP_108761.1| putative chromosome partition protein [Burkholderia pseudomallei K96243] gi|52210189|emb|CAH36168.1| putative chromosome partition protein [Burkholderia pseudomallei K96243] Length = 1170 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGSTTRKP 74 >gi|308276701|gb|ADO26600.1| Chromosome partition ATPases protein [Corynebacterium pseudotuberculosis I19] Length = 1160 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLRGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|300858753|ref|YP_003783736.1| chromosome partition protein [Corynebacterium pseudotuberculosis FRC41] gi|300686207|gb|ADK29129.1| chromosome partition protein [Corynebacterium pseudotuberculosis FRC41] gi|302206459|gb|ADL10801.1| Chromosome partition protein [Corynebacterium pseudotuberculosis C231] gi|302331014|gb|ADL21208.1| Chromosome partition protein [Corynebacterium pseudotuberculosis 1002] Length = 1160 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLRGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|269120738|ref|YP_003308915.1| chromosome segregation protein SMC [Sebaldella termitidis ATCC 33386] gi|268614616|gb|ACZ08984.1| chromosome segregation protein SMC [Sebaldella termitidis ATCC 33386] Length = 1175 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ F+ F E I+F + +T + G NG GKS++ +AI W+ + + Sbjct: 1 MYLKALELNGFKSFAEKTVIDFTNGITSIVGPNGSGKSNILDAILWVLGEQSYKSIRAKD 60 >gi|198283035|ref|YP_002219356.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247556|gb|ACH83149.1| chromosome segregation protein SMC [Acidithiobacillus ferrooxidans ATCC 53993] Length = 1150 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I + F+ F E +I+F + ++ G NG GKS+ +A+ W+ + R+ G + Sbjct: 1 MRLSAIILQGFKSFRESTRIQFDANPVVIIGPNGCGKSNTVDAVRWVLGESSARQLRGGT 60 Query: 87 IKK 89 + Sbjct: 61 LSD 63 >gi|189347468|ref|YP_001943997.1| chromosome segregation protein SMC [Chlorobium limicola DSM 245] gi|189341615|gb|ACD91018.1| chromosome segregation protein SMC [Chlorobium limicola DSM 245] Length = 1178 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ---RRKH 83 L IEI F+ F +I F LT + G NG GK+++ +AI W+ R Sbjct: 1 MYLSKIEILGFKSFAHRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQRTTLLRSAK 60 Query: 84 GDSIKKRSIKTPMPMCM 100 ++I K P+ + Sbjct: 61 MENIIFNGSKNLKPLSL 77 >gi|257063722|ref|YP_003143394.1| chromosome segregation protein SMC [Slackia heliotrinireducens DSM 20476] gi|256791375|gb|ACV22045.1| chromosome segregation protein SMC [Slackia heliotrinireducens DSM 20476] Length = 1174 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + Q I +T + G NG GKS++S+A+ W+ + G + Sbjct: 1 MYLKSLVLKGFKSFADRQVISLEPGITAIVGPNGSGKSNISDAVLWVLGERNPKHLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|326771794|ref|ZP_08231079.1| chromosome segregation protein SMC [Actinomyces viscosus C505] gi|326637927|gb|EGE38828.1| chromosome segregation protein SMC [Actinomyces viscosus C505] Length = 435 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +T V G NG GKS++ +A+ W+ + G S Sbjct: 22 VHLKTLTIKGFKSFASSTTLRLEPGITAVVGPNGSGKSNVVDALTWVMGEQGAKNLRGGS 81 Query: 87 IKK 89 + Sbjct: 82 MAD 84 >gi|325981744|ref|YP_004294146.1| chromosome segregation protein SMC [Nitrosomonas sp. AL212] gi|325531263|gb|ADZ25984.1| chromosome segregation protein SMC [Nitrosomonas sp. AL212] Length = 1183 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E + + L + G NG GKS++ +A+ W+ GDS Sbjct: 1 MRLAYIKLAGFKSFAEPTTVPISHDLVGIVGPNGCGKSNVIDAVRWVLGESKASALRGDS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|156139595|gb|ABU51098.1| unknown [uncultured bacterium Bio5] Length = 409 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +L I I F+ F + ++ +T + G NG GKS++S+AI W+ + + G Sbjct: 27 LLELKRIHILGFKSFCDRTEVSLDTHGVTAIVGPNGCGKSNISDAISWVLGEQSAKSLRG 86 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + + P MA Sbjct: 87 AKMEDVIFSGTRERKPTGMA 106 >gi|90425846|ref|YP_534216.1| chromosome segregation protein SMC [Rhodopseudomonas palustris BisB18] gi|90107860|gb|ABD89897.1| condensin subunit Smc [Rhodopseudomonas palustris BisB18] Length = 1154 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFLIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|296117610|ref|ZP_06836194.1| putative RecF/RecN/SMC N domain protein [Corynebacterium ammoniagenes DSM 20306] gi|295969341|gb|EFG82582.1| putative RecF/RecN/SMC N domain protein [Corynebacterium ammoniagenes DSM 20306] Length = 1152 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|238026895|ref|YP_002911126.1| chromosome segregation protein SMC [Burkholderia glumae BGR1] gi|237876089|gb|ACR28422.1| Chromosome segregation protein SMC [Burkholderia glumae BGR1] Length = 1172 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|206560460|ref|YP_002231224.1| putative chromosome partition protein [Burkholderia cenocepacia J2315] gi|198036501|emb|CAR52398.1| putative chromosome partition protein [Burkholderia cenocepacia J2315] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|172060974|ref|YP_001808626.1| chromosome segregation protein SMC [Burkholderia ambifaria MC40-6] gi|171993491|gb|ACB64410.1| chromosome segregation protein SMC [Burkholderia ambifaria MC40-6] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|170703082|ref|ZP_02893904.1| chromosome segregation protein SMC [Burkholderia ambifaria IOP40-10] gi|170132011|gb|EDT00517.1| chromosome segregation protein SMC [Burkholderia ambifaria IOP40-10] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|170733382|ref|YP_001765329.1| chromosome segregation protein SMC [Burkholderia cenocepacia MC0-3] gi|169816624|gb|ACA91207.1| chromosome segregation protein SMC [Burkholderia cenocepacia MC0-3] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|167837049|ref|ZP_02463932.1| chromosome segregation protein SMC [Burkholderia thailandensis MSMB43] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|167619579|ref|ZP_02388210.1| chromosome segregation protein SMC [Burkholderia thailandensis Bt4] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|167586845|ref|ZP_02379233.1| chromosome segregation protein SMC [Burkholderia ubonensis Bu] Length = 541 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|167581470|ref|ZP_02374344.1| chromosome segregation protein SMC [Burkholderia thailandensis TXDOH] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|134296036|ref|YP_001119771.1| chromosome segregation protein SMC [Burkholderia vietnamiensis G4] gi|134139193|gb|ABO54936.1| chromosome segregation protein SMC [Burkholderia vietnamiensis G4] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|116690047|ref|YP_835670.1| chromosome segregation protein SMC [Burkholderia cenocepacia HI2424] gi|116648136|gb|ABK08777.1| chromosome segregation protein SMC [Burkholderia cenocepacia HI2424] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|107028794|ref|YP_625889.1| chromosome segregation protein SMC [Burkholderia cenocepacia AU 1054] gi|105897958|gb|ABF80916.1| Chromosome segregation protein SMC [Burkholderia cenocepacia AU 1054] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|83718996|ref|YP_442543.1| chromosome segregation protein SMC [Burkholderia thailandensis E264] gi|257138752|ref|ZP_05587014.1| chromosome segregation protein SMC [Burkholderia thailandensis E264] gi|83652821|gb|ABC36884.1| chromosome segregation protein SMC [Burkholderia thailandensis E264] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|78066805|ref|YP_369574.1| chromosome segregation protein SMC [Burkholderia sp. 383] gi|77967550|gb|ABB08930.1| Chromosome segregation protein SMC [Burkholderia sp. 383] Length = 1170 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|269219660|ref|ZP_06163514.1| Smc protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210902|gb|EEZ77242.1| Smc protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 1185 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + F+ F + F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MYVHLKSLTLRGFKSFATATTLRFEPGINCVVGPNGSGKSNVVDALAWVMGEQGAKNLRG 60 Query: 85 DSIKK 89 ++ Sbjct: 61 GNMAD 65 >gi|89900983|ref|YP_523454.1| chromosome segregation protein SMC [Rhodoferax ferrireducens T118] gi|89345720|gb|ABD69923.1| Chromosome segregation protein SMC [Rhodoferax ferrireducens T118] Length = 1171 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P A Sbjct: 61 MQDVIFNGTNTRKPSSRA 78 >gi|312793350|ref|YP_004026273.1| chromosome segregation protein smc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180490|gb|ADQ40660.1| chromosome segregation protein SMC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1177 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQSLKILR 57 >gi|284992407|ref|YP_003410961.1| chromosome segregation protein SMC [Geodermatophilus obscurus DSM 43160] gi|284065652|gb|ADB76590.1| chromosome segregation protein SMC [Geodermatophilus obscurus DSM 43160] Length = 1188 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLSSLTLKGFKSFASATTLRLEPGITAVVGPNGSGKSNVVDAIAWVLGEQGAKSLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|331698518|ref|YP_004334757.1| chromosome segregation protein SMC [Pseudonocardia dioxanivorans CB1190] gi|326953207|gb|AEA26904.1| chromosome segregation protein SMC [Pseudonocardia dioxanivorans CB1190] Length = 1186 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDAISWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|306836413|ref|ZP_07469390.1| chromosome segregation protein Smc [Corynebacterium accolens ATCC 49726] gi|304567694|gb|EFM43282.1| chromosome segregation protein Smc [Corynebacterium accolens ATCC 49726] Length = 1176 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATSLKFEPGICAVVGPNGSGKSNVVDALAWVMGEASAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|227503346|ref|ZP_03933395.1| chromosome segregation protein Smc [Corynebacterium accolens ATCC 49725] gi|227075849|gb|EEI13812.1| chromosome segregation protein Smc [Corynebacterium accolens ATCC 49725] Length = 1176 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATSLKFEPGICAVVGPNGSGKSNVVDALAWVMGEASAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|256397108|ref|YP_003118672.1| chromosome segregation protein SMC [Catenulispora acidiphila DSM 44928] gi|256363334|gb|ACU76831.1| chromosome segregation protein SMC [Catenulispora acidiphila DSM 44928] Length = 1224 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 5 VYLKTLTLRGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK 64 Query: 87 IKK 89 ++ Sbjct: 65 MED 67 >gi|227497499|ref|ZP_03927728.1| SMC structural maintenance of chromosomes partitioning protein [Actinomyces urogenitalis DSM 15434] gi|226833073|gb|EEH65456.1| SMC structural maintenance of chromosomes partitioning protein [Actinomyces urogenitalis DSM 15434] Length = 431 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I F+ F + +T V G NG GKS++ +A+ W+ + G S Sbjct: 1 MHLKTLTIKGFKSFASSTTLRLEPGITAVVGPNGSGKSNVVDALTWVMGEQGVKNLRGGS 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|146339047|ref|YP_001204095.1| putative chromosome segregation SMC protein [Bradyrhizobium sp. ORS278] gi|146191853|emb|CAL75858.1| putative chromosome segregation SMC protein [Bradyrhizobium sp. ORS278] Length = 1154 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKTFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRAAD 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D++ T A Sbjct: 61 MDAVIFSGSNTRPSRNHA 78 >gi|126448428|ref|YP_001080888.1| chromosome segregation protein SMC [Burkholderia mallei NCTC 10247] gi|126241298|gb|ABO04391.1| chromosome segregation protein SMC [Burkholderia mallei NCTC 10247] Length = 1202 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 33 VRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 92 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 93 MQDVIFNGSTTRKP 106 >gi|121600119|ref|YP_993381.1| chromosome segregation protein SMC [Burkholderia mallei SAVP1] gi|251768206|ref|ZP_02269845.2| chromosome segregation protein SMC [Burkholderia mallei PRL-20] gi|121228929|gb|ABM51447.1| chromosome segregation protein SMC [Burkholderia mallei SAVP1] gi|243060510|gb|EES42696.1| chromosome segregation protein SMC [Burkholderia mallei PRL-20] Length = 1200 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 31 VRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 90 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 91 MQDVIFNGSTTRKP 104 >gi|76808719|ref|YP_333984.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1710b] gi|76578172|gb|ABA47647.1| chromosome segregation protein SMC [Burkholderia pseudomallei 1710b] Length = 1268 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 99 VRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 158 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 159 MQDVIFNGSTTRKP 172 >gi|326317203|ref|YP_004234875.1| chromosome segregation protein SMC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374039|gb|ADX46308.1| chromosome segregation protein SMC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1175 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFAEPTHFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|120611507|ref|YP_971185.1| chromosome segregation protein SMC [Acidovorax citrulli AAC00-1] gi|120589971|gb|ABM33411.1| chromosome segregation protein SMC [Acidovorax citrulli AAC00-1] Length = 1175 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFAEPTHFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|148253812|ref|YP_001238397.1| condensin subunit Smc [Bradyrhizobium sp. BTAi1] gi|146405985|gb|ABQ34491.1| condensin subunit Smc [Bradyrhizobium sp. BTAi1] Length = 1154 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKTFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRAAD 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D++ T A Sbjct: 61 MDAVIFSGSNTRPARNHA 78 >gi|312127774|ref|YP_003992648.1| chromosome segregation protein smc [Caldicellulosiruptor hydrothermalis 108] gi|311777793|gb|ADQ07279.1| chromosome segregation protein SMC [Caldicellulosiruptor hydrothermalis 108] Length = 1177 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQSLKILR 57 >gi|296116300|ref|ZP_06834916.1| chromosome partition protein SMC [Gluconacetobacter hansenii ATCC 23769] gi|295977119|gb|EFG83881.1| chromosome partition protein SMC [Gluconacetobacter hansenii ATCC 23769] Length = 1518 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + I+ F+ F + IE LT + G NG GKS++ EA+ W + R G + Sbjct: 4 RFARLRIAGFKSFADPASIEILPGLTGIVGPNGCGKSNVVEALRWTMGETSARSLRGGEM 63 Query: 88 KKR 90 Sbjct: 64 DDL 66 >gi|305681389|ref|ZP_07404196.1| chromosome segregation protein SMC [Corynebacterium matruchotii ATCC 14266] gi|305659594|gb|EFM49094.1| chromosome segregation protein SMC [Corynebacterium matruchotii ATCC 14266] Length = 1198 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + +V G NG GKS++ +A+ W+ + G Sbjct: 22 VYLKSLTLRGFKSFASATTLKFEPGICVVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 81 Query: 87 IKK 89 ++ Sbjct: 82 MED 84 >gi|225022005|ref|ZP_03711197.1| hypothetical protein CORMATOL_02037 [Corynebacterium matruchotii ATCC 33806] gi|224945291|gb|EEG26500.1| hypothetical protein CORMATOL_02037 [Corynebacterium matruchotii ATCC 33806] Length = 837 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + +V G NG GKS++ +A+ W+ + G Sbjct: 4 VYLKSLTLRGFKSFASATTLKFEPGICVVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 63 Query: 87 IKK 89 ++ Sbjct: 64 MED 66 >gi|167570381|ref|ZP_02363255.1| chromosome segregation protein SMC [Burkholderia oklahomensis C6786] Length = 688 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 71 VRLSSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES 130 Query: 87 IKK 89 ++ Sbjct: 131 MQD 133 >gi|312796236|ref|YP_004029158.1| Chromosome partition protein smc [Burkholderia rhizoxinica HKI 454] gi|312168011|emb|CBW75014.1| Chromosome partition protein smc [Burkholderia rhizoxinica HKI 454] Length = 1189 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +L I+++ F+ F ++ + L V G NG GKS++ +A+ W+ G Sbjct: 16 IAVRLTSIKLAGFKSFVDLTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRG 75 Query: 85 DSIKK 89 +S++ Sbjct: 76 ESMQD 80 >gi|194289799|ref|YP_002005706.1| chromosome segregation protein smc [Cupriavidus taiwanensis LMG 19424] gi|193223634|emb|CAQ69641.1| Chromosome segregation protein SMC [Cupriavidus taiwanensis LMG 19424] Length = 1171 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFQVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|159899159|ref|YP_001545406.1| chromosome segregation protein SMC [Herpetosiphon aurantiacus ATCC 23779] gi|159892198|gb|ABX05278.1| chromosome segregation protein SMC [Herpetosiphon aurantiacus ATCC 23779] Length = 1192 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI F+ F IEF +T + G NG GKS++++AI W+ + Sbjct: 1 MYLKRLEIQGFKTFANRTVIEFPLGVTAIVGPNGSGKSNVTDAIRWVLGEQSFSALR 57 >gi|113868041|ref|YP_726530.1| chromosome segregation ATPase [Ralstonia eutropha H16] gi|113526817|emb|CAJ93162.1| chromosome segregation ATPase [Ralstonia eutropha H16] Length = 1171 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFQVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|73541577|ref|YP_296097.1| chromosome segregation protein SMC [Ralstonia eutropha JMP134] gi|72118990|gb|AAZ61253.1| Chromosome segregation protein SMC [Ralstonia eutropha JMP134] Length = 1171 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFQVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|94310368|ref|YP_583578.1| condensin subunit Smc [Cupriavidus metallidurans CH34] gi|93354220|gb|ABF08309.1| chromosome segregation ATPase [Cupriavidus metallidurans CH34] Length = 1171 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFQVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|320107681|ref|YP_004183271.1| chromosome segregation protein SMC [Terriglobus saanensis SP1PR4] gi|319926202|gb|ADV83277.1| chromosome segregation protein SMC [Terriglobus saanensis SP1PR4] Length = 1288 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL ++I F+ F + ++ + V G NG GKS++S+AI W+ + + G Sbjct: 1 MLKLKRVQILGFKSFCDRTDVQLSGSGIAAVVGPNGCGKSNISDAITWVLGEQSAKSLRG 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 + + + P MA Sbjct: 61 IKMEDVIFAGTRDRKPTGMA 80 >gi|300780914|ref|ZP_07090768.1| chromosome segregation protein Smc [Corynebacterium genitalium ATCC 33030] gi|300532621|gb|EFK53682.1| chromosome segregation protein Smc [Corynebacterium genitalium ATCC 33030] Length = 1153 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLSSLTLKGFKSFASSTTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|84498328|ref|ZP_00997125.1| putative chromosome associated protein [Janibacter sp. HTCC2649] gi|84381828|gb|EAP97711.1| putative chromosome associated protein [Janibacter sp. HTCC2649] Length = 1188 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F + +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MYVKSLTLKGFKSFASATTMRLEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|325001482|ref|ZP_08122594.1| chromosome segregation protein SMC [Pseudonocardia sp. P1] Length = 440 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKTLTMKGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDAISWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|330466271|ref|YP_004404014.1| chromosome segregation protein smc [Verrucosispora maris AB-18-032] gi|328809242|gb|AEB43414.1| chromosome segregation protein smc [Verrucosispora maris AB-18-032] Length = 1204 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTVKGFKSFASATTLKLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|302865867|ref|YP_003834504.1| chromosome segregation protein SMC [Micromonospora aurantiaca ATCC 27029] gi|315502412|ref|YP_004081299.1| chromosome segregation protein smc [Micromonospora sp. L5] gi|302568726|gb|ADL44928.1| chromosome segregation protein SMC [Micromonospora aurantiaca ATCC 27029] gi|315409031|gb|ADU07148.1| chromosome segregation protein SMC [Micromonospora sp. L5] Length = 1199 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTVKGFKSFASATTLKLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|159036827|ref|YP_001536080.1| chromosome segregation protein SMC [Salinispora arenicola CNS-205] gi|157915662|gb|ABV97089.1| chromosome segregation protein SMC [Salinispora arenicola CNS-205] Length = 1198 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTVKGFKSFASATTLKLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|145593842|ref|YP_001158139.1| chromosome segregation protein SMC [Salinispora tropica CNB-440] gi|145303179|gb|ABP53761.1| condensin subunit Smc [Salinispora tropica CNB-440] Length = 1198 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTVKGFKSFASATTLKLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|255325271|ref|ZP_05366377.1| chromosome segregation protein SMC [Corynebacterium tuberculostearicum SK141] gi|255297836|gb|EET77147.1| chromosome segregation protein SMC [Corynebacterium tuberculostearicum SK141] Length = 1173 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATSLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|311739746|ref|ZP_07713581.1| chromosome segregation protein Smc [Corynebacterium pseudogenitalium ATCC 33035] gi|311305562|gb|EFQ81630.1| chromosome segregation protein Smc [Corynebacterium pseudogenitalium ATCC 33035] Length = 1173 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATSLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|91788456|ref|YP_549408.1| chromosome segregation protein SMC [Polaromonas sp. JS666] gi|91697681|gb|ABE44510.1| Chromosome segregation protein SMC [Polaromonas sp. JS666] Length = 1182 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IK---KRSIKTPMP 97 ++ T P Sbjct: 61 MQDVIFNGTNTRKP 74 >gi|258652111|ref|YP_003201267.1| chromosome segregation protein SMC [Nakamurella multipartita DSM 44233] gi|258555336|gb|ACV78278.1| chromosome segregation protein SMC [Nakamurella multipartita DSM 44233] Length = 1214 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G Sbjct: 1 MHLKSLTMKGFKSFASSTTLRLEPGITAVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|312135007|ref|YP_004002345.1| chromosome segregation protein smc [Caldicellulosiruptor owensensis OL] gi|311775058|gb|ADQ04545.1| chromosome segregation protein SMC [Caldicellulosiruptor owensensis OL] Length = 1177 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQSLKILR 57 >gi|269123683|ref|YP_003306260.1| SMC domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315009|gb|ACZ01383.1| SMC domain protein [Streptobacillus moniliformis DSM 12112] Length = 1180 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI+ F+ F+ I+F +T + G NG GKS++ +AI W+ + + Sbjct: 1 MYLKALEINGFKSFSIKTIIDFTQGITAIVGPNGSGKSNILDAILWVLGEQSYKNIRAAM 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K A Sbjct: 61 SSDVIFSGGKNKKHANSA 78 >gi|15964684|ref|NP_385037.1| putative chromosome partition protein [Sinorhizobium meliloti 1021] gi|15073862|emb|CAC45503.1| Putative chromosome partition protein [Sinorhizobium meliloti 1021] Length = 1156 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L+ K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 2 LLMKFTRLRLLGFKSFVEPTEFVIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRA 61 Query: 85 DSIKK 89 + Sbjct: 62 SGMDD 66 >gi|85374547|ref|YP_458609.1| chromosome segregation protein [Erythrobacter litoralis HTCC2594] gi|84787630|gb|ABC63812.1| chromosome segregation protein [Erythrobacter litoralis HTCC2594] Length = 1140 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++ +++S F+ F E ++ LT V G NG GKS+L EAI W+ + + Sbjct: 1 MQIRRLKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWVMGENSPKSMRSGG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + +T P A Sbjct: 61 MEDVIFAGTETRPPRDFA 78 >gi|295687792|ref|YP_003591485.1| chromosome segregation protein SMC [Caulobacter segnis ATCC 21756] gi|295429695|gb|ADG08867.1| chromosome segregation protein SMC [Caulobacter segnis ATCC 21756] Length = 1147 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + +S F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MQFQRLRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGANSAKAMRAGG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P A Sbjct: 61 MDDVIFAGSGARPPRNHA 78 >gi|220927386|ref|YP_002502688.1| chromosome segregation protein SMC [Methylobacterium nodulans ORS 2060] gi|219951993|gb|ACL62385.1| chromosome segregation protein SMC [Methylobacterium nodulans ORS 2060] Length = 1148 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + I F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKLTRLRIVGFKTFVEPSEFLIEPGLTGIIGPNGCGKSNLVEALRWVMGENSHKSLRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|84685466|ref|ZP_01013364.1| SMC protein [Maritimibacter alkaliphilus HTCC2654] gi|84666623|gb|EAQ13095.1| SMC protein [Rhodobacterales bacterium HTCC2654] Length = 1151 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + A+ LT V G NG GKS+L EA+ W+ + GD Sbjct: 1 MQFTRLRLNGFKSFVDPTDLVIANGLTGVVGPNGCGKSNLLEALRWVMGENRAKAMRGDG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|323359696|ref|YP_004226092.1| chromosome segregation ATPase [Microbacterium testaceum StLB037] gi|323276067|dbj|BAJ76212.1| chromosome segregation ATPase [Microbacterium testaceum StLB037] Length = 1173 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F + +T + G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSVTLKGFKSFAQSTTFALEPGVTCIVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + T P+ A Sbjct: 61 MEDVIFAGTSTRGPLGRA 78 >gi|257095176|ref|YP_003168817.1| chromosome segregation protein SMC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047700|gb|ACV36888.1| chromosome segregation protein SMC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1171 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTKLKLAGFKSFVDPTTIALPGQLVGVVGPNGCGKSNVMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|237785776|ref|YP_002906481.1| chromosome segregation protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758688|gb|ACR17938.1| chromosome segregation protein [Corynebacterium kroppenstedtii DSM 44385] Length = 1194 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L + + F+ F ++ + V G NG GKS++ +A+ W+ + G Sbjct: 1 MYLKSLTLKGFKSFASSTTLKLEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGS 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ A Sbjct: 61 MDDVIFAGTGARKPLGRA 78 >gi|332529210|ref|ZP_08405174.1| chromosome segregation protein SMC [Hylemonella gracilis ATCC 19624] gi|332041433|gb|EGI77795.1| chromosome segregation protein SMC [Hylemonella gracilis ATCC 19624] Length = 1177 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|312877060|ref|ZP_07737033.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796201|gb|EFR12557.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 935 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IEF +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIEFQKGITAIVGPNGCGKSNITDAIRWALGEQSLKILR 57 >gi|219847692|ref|YP_002462125.1| chromosome segregation protein SMC [Chloroflexus aggregans DSM 9485] gi|219541951|gb|ACL23689.1| chromosome segregation protein SMC [Chloroflexus aggregans DSM 9485] Length = 1189 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI F+ F EF + V G NG GKS+L++A+ W+ + Sbjct: 1 MYLKRLEIQGFKTFASRTVFEFQPGIIAVVGPNGSGKSNLADAVRWVLGEQSMSALR 57 >gi|309810310|ref|ZP_07704148.1| chromosome segregation protein SMC [Dermacoccus sp. Ellin185] gi|308435738|gb|EFP59532.1| chromosome segregation protein SMC [Dermacoccus sp. Ellin185] Length = 1223 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F + +T + G NG GKS++ +A+ W+ + R G Sbjct: 1 MYVKSLTLKGFKSFASATNLVLEPGITCIVGPNGSGKSNVVDALAWVMGEGSARSLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P+ A Sbjct: 61 MDDVIFAGTSGRQPLGRA 78 >gi|212212965|ref|YP_002303901.1| chromosome partition protein [Coxiella burnetii CbuG_Q212] gi|212011375|gb|ACJ18756.1| chromosome partition protein [Coxiella burnetii CbuG_Q212] Length = 1169 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|153207823|ref|ZP_01946423.1| chromosome segregation protein SMC [Coxiella burnetii 'MSU Goat Q177'] gi|212218837|ref|YP_002305624.1| chromosome partition protein [Coxiella burnetii CbuK_Q154] gi|120576375|gb|EAX32999.1| chromosome segregation protein SMC [Coxiella burnetii 'MSU Goat Q177'] gi|212013099|gb|ACJ20479.1| chromosome partition protein [Coxiella burnetii CbuK_Q154] Length = 1169 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|161829706|ref|YP_001596471.1| chromosome segregation protein SMC [Coxiella burnetii RSA 331] gi|161761573|gb|ABX77215.1| chromosome segregation protein SMC [Coxiella burnetii RSA 331] Length = 1169 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|154707358|ref|YP_001424868.1| chromosome partition protein smc [Coxiella burnetii Dugway 5J108-111] gi|154356644|gb|ABS78106.1| chromosome partition protein smc [Coxiella burnetii Dugway 5J108-111] Length = 1169 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|87198977|ref|YP_496234.1| chromosome segregation protein SMC [Novosphingobium aromaticivorans DSM 12444] gi|87134658|gb|ABD25400.1| Chromosome segregation protein SMC [Novosphingobium aromaticivorans DSM 12444] Length = 1147 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +++S F+ F E ++ LT V G NG GKS+L EAI W+ + + G Sbjct: 1 MMQFRRLKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWVMGESSPKSMRGG 60 Query: 86 SIKK 89 ++ Sbjct: 61 GMED 64 >gi|29653880|ref|NP_819572.1| chromosome segregation protein SMC [Coxiella burnetii RSA 493] gi|28375461|emb|CAD66594.1| SMC protein [Coxiella burnetii] gi|29541143|gb|AAO90086.1| chromosome partition protein [Coxiella burnetii RSA 493] Length = 1169 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|264678825|ref|YP_003278732.1| chromosome segregation protein SMC [Comamonas testosteroni CNB-2] gi|299529803|ref|ZP_07043236.1| chromosome segregation protein SMC [Comamonas testosteroni S44] gi|262209338|gb|ACY33436.1| chromosome segregation protein SMC [Comamonas testosteroni CNB-2] gi|298722217|gb|EFI63141.1| chromosome segregation protein SMC [Comamonas testosteroni S44] Length = 1175 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E + V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFILPGQMVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|221066627|ref|ZP_03542732.1| chromosome segregation protein SMC [Comamonas testosteroni KF-1] gi|220711650|gb|EED67018.1| chromosome segregation protein SMC [Comamonas testosteroni KF-1] Length = 1175 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E + V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFILPGQMVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|260432725|ref|ZP_05786696.1| chromosome segregation protein SMC [Silicibacter lacuscaerulensis ITI-1157] gi|260416553|gb|EEX09812.1| chromosome segregation protein SMC [Silicibacter lacuscaerulensis ITI-1157] Length = 1151 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G + Sbjct: 1 MRFTKLKLTGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKSMRGGA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|146329776|ref|YP_001209519.1| chromosome segregation SMC family protein [Dichelobacter nodosus VCS1703A] gi|146233246|gb|ABQ14224.1| chromosome segregation SMC family protein [Dichelobacter nodosus VCS1703A] Length = 1127 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ F+ F + +T + G NG GKS++ +A+ W+ ++ G Sbjct: 1 MKLTAIELIGFKSFADRALFPVDAPITGIIGPNGCGKSNIVDAVRWVLGESAAKQLRGQM 60 Query: 87 IKK 89 + Sbjct: 61 LTD 63 >gi|301632521|ref|XP_002945332.1| PREDICTED: protein P115 homolog [Xenopus (Silurana) tropicalis] Length = 1168 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 87 VRLQSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES 146 Query: 87 IKK 89 ++ Sbjct: 147 MQD 149 >gi|145220266|ref|YP_001130975.1| chromosome segregation protein SMC [Prosthecochloris vibrioformis DSM 265] gi|145206430|gb|ABP37473.1| chromosome segregation protein SMC [Chlorobium phaeovibrioides DSM 265] Length = 1178 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIELFGFKSFANRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSSLLRSAK 60 Query: 85 -DSIKKRSIKTPMPM 98 ++I + P+ Sbjct: 61 MENIIFNGSRNLKPL 75 >gi|148557587|ref|YP_001265169.1| chromosome segregation protein SMC [Sphingomonas wittichii RW1] gi|148502777|gb|ABQ71031.1| chromosome segregation protein SMC [Sphingomonas wittichii RW1] Length = 1140 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F E ++ LT + G NG GKS+L EAI W+ + + G Sbjct: 1 MRFRKLRLSGFKSFVEPAELIIERGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|319441352|ref|ZP_07990508.1| chromosome segregation protein [Corynebacterium variabile DSM 44702] Length = 1180 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLKFEPGICGVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|121604716|ref|YP_982045.1| chromosome segregation protein SMC [Polaromonas naphthalenivorans CJ2] gi|120593685|gb|ABM37124.1| chromosome segregation protein SMC [Polaromonas naphthalenivorans CJ2] Length = 1181 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFADPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|83945335|ref|ZP_00957683.1| smc protein [Oceanicaulis alexandrii HTCC2633] gi|83851169|gb|EAP89026.1| smc protein [Oceanicaulis alexandrii HTCC2633] Length = 1145 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + ++ F+ F + ++ LT + G NG GKS+L EA+ W+ + + G Sbjct: 1 MKFTQLRLAGFKSFVDPTELRIDAGLTGIIGPNGCGKSNLLEALRWVMGATSAKSLRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|260219437|emb|CBA26282.1| hypothetical protein Csp_E33700 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 1102 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|34849448|gb|AAP58947.1| chromosome segregation ATPase [Spiroplasma kunkelii CR2-3x] Length = 988 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L IE F+ F + + F + + G NG GKS++++AI W + + G+ Sbjct: 1 MLFLKKIEAFGFKSFADPLIVNFDHEMIGIVGPNGSGKSNINDAIRWCLGEQSIKSLRGN 60 Query: 86 S---IKKRSIKTPMPMCMA 101 + + +T + +A Sbjct: 61 NSEDVIFNGSETKPGLNIA 79 >gi|217967336|ref|YP_002352842.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] gi|217336435|gb|ACK42228.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] Length = 1082 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E+++F+ F KI F+ T++ G NG GKS++ +AI W+ + + Sbjct: 1 MIYLKSLELTNFKSFIGNNKIPFSQKFTVITGPNGSGKSNILDAIRWVLGEQRIKALRAE 60 Query: 86 S 86 Sbjct: 61 K 61 >gi|323705468|ref|ZP_08117043.1| chromosome segregation protein SMC [Thermoanaerobacterium xylanolyticum LX-11] gi|323535370|gb|EGB25146.1| chromosome segregation protein SMC [Thermoanaerobacterium xylanolyticum LX-11] Length = 1182 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + + F +T + G NG GKS++S+A+ + + + G Sbjct: 1 MFLKKLDIIGFKSFADRVVLNFEKGITAIVGPNGSGKSNISDAVRLVLGEQSIKSLRGNK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + P+ A Sbjct: 61 LEDVIFVGTENRKPLSFA 78 >gi|297623774|ref|YP_003705208.1| SMC domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164954|gb|ADI14665.1| SMC domain protein [Truepera radiovictrix DSM 17093] Length = 1131 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 +L + + F+ F + +EF + +T + G NG GKS+L +A+ W G GD Sbjct: 1 MRLTSLTLQGFKSFADRTTLEFTEGVTAIVGPNGSGKSNLIDALRWATGGGRAEAFRAGD 60 Query: 86 S--IKKRSIKTPMPMCMAVPRCKYQ 108 + + A + +++ Sbjct: 61 KTELIFHGSAGKRSLGFAEVQLEFE 85 >gi|300024389|ref|YP_003757000.1| chromosome segregation protein SMC [Hyphomicrobium denitrificans ATCC 51888] gi|299526210|gb|ADJ24679.1| chromosome segregation protein SMC [Hyphomicrobium denitrificans ATCC 51888] Length = 1153 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + I F+ F + ++ LT V G NG GKS+L EA+ W+ + + + Sbjct: 1 MKITRLRILGFKSFVDPTELVIEPGLTGVVGPNGCGKSNLLEALRWVMGESSHKSMRAAA 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|262184413|ref|ZP_06043834.1| chromosome segregation protein [Corynebacterium aurimucosum ATCC 700975] Length = 806 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATNLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|227833423|ref|YP_002835130.1| chromosome segregation protein [Corynebacterium aurimucosum ATCC 700975] gi|227454439|gb|ACP33192.1| chromosome segregation protein [Corynebacterium aurimucosum ATCC 700975] Length = 1167 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATNLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|227504759|ref|ZP_03934808.1| chromosome segregation protein Smc [Corynebacterium striatum ATCC 6940] gi|227198609|gb|EEI78657.1| chromosome segregation protein Smc [Corynebacterium striatum ATCC 6940] Length = 1180 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + + G Sbjct: 1 MHLKSLTLKGFKSFASATNLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|121998659|ref|YP_001003446.1| chromosome segregation protein SMC [Halorhodospira halophila SL1] gi|121590064|gb|ABM62644.1| chromosome segregation protein SMC [Halorhodospira halophila SL1] Length = 1165 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + + + V G NG GKS++ +A+ W+ + + G+S Sbjct: 1 MHLKRIKLAGFKSFVDPTSVPLPGRMVAVVGPNGCGKSNIIDAVRWVMGESSAKHLRGES 60 Query: 87 IKK 89 + Sbjct: 61 MTD 63 >gi|134299914|ref|YP_001113410.1| chromosome segregation protein SMC [Desulfotomaculum reducens MI-1] gi|134052614|gb|ABO50585.1| condensin subunit Smc [Desulfotomaculum reducens MI-1] Length = 1186 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L ++I F+ F + K+E L++V G NG GKS++S+AI W G Sbjct: 1 MVLKRMDIQGFKSFGDRVKLELHSGLSVVVGPNGSGKSNISDAISWCLGEQRASSLRGGR 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + P+ +A Sbjct: 61 MEDVIFAGSAKRKPVGLA 78 >gi|222110863|ref|YP_002553127.1| chromosome segregation protein smc [Acidovorax ebreus TPSY] gi|221730307|gb|ACM33127.1| chromosome segregation protein SMC [Acidovorax ebreus TPSY] Length = 1174 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|121594442|ref|YP_986338.1| chromosome segregation protein SMC [Acidovorax sp. JS42] gi|120606522|gb|ABM42262.1| chromosome segregation protein SMC [Acidovorax sp. JS42] Length = 1174 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLAGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|227548996|ref|ZP_03979045.1| possible chromosome segregation protein Smc [Corynebacterium lipophiloflavum DSM 44291] gi|227078947|gb|EEI16910.1| possible chromosome segregation protein Smc [Corynebacterium lipophiloflavum DSM 44291] Length = 636 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++F + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGVKNLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|114328528|ref|YP_745685.1| chromosome partition protein smc [Granulibacter bethesdensis CGDNIH1] gi|114316702|gb|ABI62762.1| chromosome partition protein smc [Granulibacter bethesdensis CGDNIH1] Length = 1523 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+ F+ F + Q IE LT V G NG GKS++ EA+ W + R G Sbjct: 3 VSFSRLRIAGFKSFADPQSIEILPGLTGVVGPNGCGKSNVVEALRWAMGENSARALRGGE 62 Query: 87 IKK 89 + Sbjct: 63 MDD 65 >gi|294782919|ref|ZP_06748245.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 1_1_41FAA] gi|294481560|gb|EFG29335.1| RecF/RecN/SMC N domain-containing protein [Fusobacterium sp. 1_1_41FAA] Length = 1183 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGEKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIR 57 >gi|309791173|ref|ZP_07685705.1| chromosome segregation protein SMC [Oscillochloris trichoides DG6] gi|308226735|gb|EFO80431.1| chromosome segregation protein SMC [Oscillochloris trichoides DG6] Length = 1192 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L ++I F+ F +EF +T + G NG GKS++++A+ W+ + Sbjct: 5 MYLKRLDILGFKTFATRTSVEFQPGITAIVGPNGSGKSNIADAVRWVLGEQSLSTLR 61 >gi|319793882|ref|YP_004155522.1| chromosome segregation protein smc [Variovorax paradoxus EPS] gi|315596345|gb|ADU37411.1| chromosome segregation protein SMC [Variovorax paradoxus EPS] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|239815928|ref|YP_002944838.1| chromosome segregation protein SMC [Variovorax paradoxus S110] gi|239802505|gb|ACS19572.1| chromosome segregation protein SMC [Variovorax paradoxus S110] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|319779223|ref|YP_004130136.1| Chromosome partition protein smc [Taylorella equigenitalis MCE9] gi|317109247|gb|ADU91993.1| Chromosome partition protein smc [Taylorella equigenitalis MCE9] Length = 1173 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I++S F+ F E I +L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTHIKLSGFKSFVETTDIAIPSNLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|315498141|ref|YP_004086945.1| chromosome segregation protein smc [Asticcacaulis excentricus CB 48] gi|315416153|gb|ADU12794.1| chromosome segregation protein SMC [Asticcacaulis excentricus CB 48] Length = 1154 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++S F+ F + + LT + G NG GKS+L EA+ W+ + + G Sbjct: 1 MQFQRLKLSGFKSFVDASEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGATSAKAMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|309782144|ref|ZP_07676874.1| RecF/RecN/SMC N domain-containing protein [Ralstonia sp. 5_7_47FAA] gi|308919210|gb|EFP64877.1| RecF/RecN/SMC N domain-containing protein [Ralstonia sp. 5_7_47FAA] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|300691612|ref|YP_003752607.1| chromosome segregation protein SMC [Ralstonia solanacearum PSI07] gi|299078672|emb|CBJ51330.1| Chromosome segregation protein SMC [Ralstonia solanacearum PSI07] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|300704239|ref|YP_003745842.1| chromosome segregation protein smc [Ralstonia solanacearum CFBP2957] gi|299071903|emb|CBJ43232.1| Chromosome segregation protein SMC [Ralstonia solanacearum CFBP2957] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|207723345|ref|YP_002253744.1| chromosome segregation protein smc [Ralstonia solanacearum MolK2] gi|206588544|emb|CAQ35507.1| putative chromosome segregation protein smc [Ralstonia solanacearum MolK2] Length = 1575 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|241662935|ref|YP_002981295.1| chromosome segregation protein SMC [Ralstonia pickettii 12D] gi|240864962|gb|ACS62623.1| chromosome segregation protein SMC [Ralstonia pickettii 12D] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|187928359|ref|YP_001898846.1| chromosome segregation protein SMC [Ralstonia pickettii 12J] gi|187725249|gb|ACD26414.1| chromosome segregation protein SMC [Ralstonia pickettii 12J] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|83748814|ref|ZP_00945827.1| Smc [Ralstonia solanacearum UW551] gi|207743252|ref|YP_002259644.1| chromosome segregation protein smc [Ralstonia solanacearum IPO1609] gi|83724506|gb|EAP71671.1| Smc [Ralstonia solanacearum UW551] gi|206594649|emb|CAQ61576.1| putative chromosome segregation protein smc [Ralstonia solanacearum IPO1609] Length = 1171 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVDPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|169335335|ref|ZP_02862528.1| hypothetical protein ANASTE_01747 [Anaerofustis stercorihominis DSM 17244] gi|169258073|gb|EDS72039.1| hypothetical protein ANASTE_01747 [Anaerofustis stercorihominis DSM 17244] Length = 1192 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L +EI F+ F + +I F + +T + G NG GKS++ +AI W+ + G Sbjct: 1 MYLKKVEIYGFKSFGQKVEIIFDNKVTGIVGPNGSGKSNIVDAIRWVLGEQRVKTLRGGK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 + + + + A Sbjct: 61 MEDVIFSGTEEKRALGYA 78 >gi|308234555|ref|ZP_07665292.1| condensin subunit Smc [Atopobium vaginae DSM 15829] gi|328944153|ref|ZP_08241618.1| chromosome segregation protein Smc [Atopobium vaginae DSM 15829] gi|327492122|gb|EGF23896.1| chromosome segregation protein Smc [Atopobium vaginae DSM 15829] Length = 1188 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + ++ F LT+V G NG GKS++S+A+ W+ R + Sbjct: 1 MYLKSLTLKGFKSFADKTEMIFDPGLTVVVGPNGSGKSNVSDAMLWVLGEQGPRNLRAQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|332525864|ref|ZP_08402005.1| chromosome segregation protein SMC [Rubrivivax benzoatilyticus JA2] gi|332109415|gb|EGJ10338.1| chromosome segregation protein SMC [Rubrivivax benzoatilyticus JA2] Length = 1171 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E + V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLNQIKLAGFKSFAEPTTFQLPGQRVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|312194946|ref|YP_004015007.1| chromosome segregation protein SMC [Frankia sp. EuI1c] gi|311226282|gb|ADP79137.1| chromosome segregation protein SMC [Frankia sp. EuI1c] Length = 1219 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G + Sbjct: 1 MYLKSLTLRGFKSFASSTTLRLEPGITCVVGPNGSGKSNVVDAMAWVLGEQGAKALRGGT 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|310778882|ref|YP_003967215.1| chromosome segregation protein SMC [Ilyobacter polytropus DSM 2926] gi|309748205|gb|ADO82867.1| chromosome segregation protein SMC [Ilyobacter polytropus DSM 2926] Length = 1170 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 L +EI+ F+ F E ++F +T + G NG GKS++ +AI W+ + + Sbjct: 1 MHLKAVEINGFKSFAEKINLDFNTGITSIVGPNGSGKSNILDAILWVLGEQSYKNIRAKE 60 Query: 86 --SIKKRSIKTPMPMCMA 101 + K P +A Sbjct: 61 SRDVIFSGGKNKKPKSLA 78 >gi|299067451|emb|CBJ38650.1| Chromosome segregation protein SMC [Ralstonia solanacearum CMR15] Length = 1171 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSSIKLAGFKSFVEPTNFHVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRAAELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|194333304|ref|YP_002015164.1| chromosome segregation protein SMC [Prosthecochloris aestuarii DSM 271] gi|194311122|gb|ACF45517.1| chromosome segregation protein SMC [Prosthecochloris aestuarii DSM 271] Length = 1186 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F I F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIELFGFKSFAHRITIRFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSALLRSTK 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 ++I + P+ ++ Sbjct: 61 MENIIFNGTRKLKPLSLS 78 >gi|255292605|dbj|BAH89715.1| chromosome segregation protein [uncultured bacterium] Length = 800 Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + + V G NG GKS++ +A+ W+ + ++ G++ Sbjct: 1 MRLKQIKLAGFKSFVDPTTVTLPSNRCAVVGPNGCGKSNIIDAVRWVMGESSAKQLRGEN 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + + P +A Sbjct: 61 LTDVIFNGSNSRKPTAIA 78 >gi|78187531|ref|YP_375574.1| chromosome segregation protein SMC [Chlorobium luteolum DSM 273] gi|78167433|gb|ABB24531.1| Chromosome segregation protein SMC [Chlorobium luteolum DSM 273] Length = 1177 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IEI F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIEIFGFKSFAHRVRISFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSSLLRSAK 60 Query: 85 -DSIKKRSIKTPMPM 98 ++I K P+ Sbjct: 61 MENIIFNGSKNLKPL 75 >gi|237736930|ref|ZP_04567411.1| chromosome partition protein smc [Fusobacterium mortiferum ATCC 9817] gi|229420792|gb|EEO35839.1| chromosome partition protein smc [Fusobacterium mortiferum ATCC 9817] Length = 1172 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L +EI F+ F E IEF LT + G NG GKS++ +A+ W+ + + Sbjct: 1 MFLKAVEIFGFKSFGERVYIEFNRGLTSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + K M A Sbjct: 61 SSDVIFSGGKDKKAMNFA 78 >gi|262067036|ref|ZP_06026648.1| putative RecF/RecN/SMC N domain protein [Fusobacterium periodonticum ATCC 33693] gi|291379245|gb|EFE86763.1| putative RecF/RecN/SMC N domain protein [Fusobacterium periodonticum ATCC 33693] Length = 1183 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGEKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIR 57 >gi|300870602|ref|YP_003785473.1| chromosome partition protein SmC [Brachyspira pilosicoli 95/1000] gi|300688301|gb|ADK30972.1| chromosome partition protein SmC, putative [Brachyspira pilosicoli 95/1000] Length = 952 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 + ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R D Sbjct: 1 MYIKNLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDS 60 Query: 86 -----SIKKRSIKTPMPMCMA 101 S+ T P +A Sbjct: 61 SKGLESVIFHGTDTRKPSSLA 81 >gi|78045010|ref|YP_360275.1| chromosome segregation protein SMC [Carboxydothermus hydrogenoformans Z-2901] gi|77997125|gb|ABB16024.1| chromosome segregation protein SMC [Carboxydothermus hydrogenoformans Z-2901] Length = 1185 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD--- 85 L + I F+ F E +I F +T + G NG GKS+++EAI W + + Sbjct: 2 LKKVVIQGFKSFAEKTEITFEPSITGIVGPNGSGKSNVAEAIRWALGETKTKILRSERQQ 61 Query: 86 SIKKRSIKTPMPMCMA 101 + + P+ MA Sbjct: 62 DVIFTGSQGRKPVGMA 77 >gi|317508545|ref|ZP_07966210.1| RecF/RecN/SMC N terminal domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316253171|gb|EFV12576.1| RecF/RecN/SMC N terminal domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 774 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V G NG GKS++++A+ W+ + G Sbjct: 1 MHLRSLTLKGFKSFASPTTLVFEPGITAVVGANGSGKSNIADALSWVMGEQGAKSLRGAK 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|313201134|ref|YP_004039792.1| chromosome segregation protein smc [Methylovorus sp. MP688] gi|312440450|gb|ADQ84556.1| chromosome segregation protein SMC [Methylovorus sp. MP688] Length = 1173 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + V G NG GKS++ E+I W+ + + GDS Sbjct: 1 MRLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESIRWVLGESSAKEMRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MDAVIFNGSANRKPISRA 78 >gi|253999026|ref|YP_003051089.1| chromosome segregation protein SMC [Methylovorus sp. SIP3-4] gi|253985705|gb|ACT50562.1| chromosome segregation protein SMC [Methylovorus sp. SIP3-4] Length = 1173 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + V G NG GKS++ E+I W+ + + GDS Sbjct: 1 MRLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESIRWVLGESSAKEMRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MDAVIFNGSANRKPISRA 78 >gi|237739986|ref|ZP_04570467.1| chromosome partition protein smc [Fusobacterium sp. 2_1_31] gi|229422003|gb|EEO37050.1| chromosome partition protein smc [Fusobacterium sp. 2_1_31] Length = 1183 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI+ F+ F E I+F +T + G NG GKS++ +A+ W+ + + Sbjct: 1 MYLKAVEINGFKSFGERVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIR 57 >gi|209542252|ref|YP_002274481.1| SMC domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209529929|gb|ACI49866.1| SMC domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 1511 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + I+ F+ F + ++ LT + G NG GKS++ EA+ W + R G + Sbjct: 4 RFVRLRIAGFKSFADPVAVDILPGLTGIVGPNGCGKSNVVEALRWAMGESSARSLRGGEM 63 Query: 88 KKR 90 Sbjct: 64 DDL 66 >gi|162147621|ref|YP_001602082.1| chromosome segregation protein SMC [Gluconacetobacter diazotrophicus PAl 5] gi|161786198|emb|CAP55780.1| putative chromosome segregation protein SMC [Gluconacetobacter diazotrophicus PAl 5] Length = 1511 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + I+ F+ F + ++ LT + G NG GKS++ EA+ W + R G + Sbjct: 4 RFVRLRIAGFKSFADPVAVDILPGLTGIVGPNGCGKSNVVEALRWAMGESSARSLRGGEM 63 Query: 88 KKR 90 Sbjct: 64 DDL 66 >gi|296282454|ref|ZP_06860452.1| chromosome segregation protein SMC [Citromicrobium bathyomarinum JL354] Length = 1140 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S F+ F E + LT V G NG GKS+L EAI W+ + + Sbjct: 1 MEIRQLRLSGFKSFVEPATLRIEPGLTGVVGPNGCGKSNLLEAIRWVMGETSAKSMRSGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|225620807|ref|YP_002722065.1| chromosome partition protein SmC [Brachyspira hyodysenteriae WA1] gi|225215627|gb|ACN84361.1| chromosome partition protein SmC [Brachyspira hyodysenteriae WA1] Length = 952 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R DS Sbjct: 1 MYIKNLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDS 60 Query: 87 IK------KRSIKTPMPMCMA 101 K T P +A Sbjct: 61 AKGLESVIFHGTDTRKPSSLA 81 >gi|254511435|ref|ZP_05123502.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium KLH11] gi|221535146|gb|EEE38134.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium KLH11] Length = 1151 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G + Sbjct: 1 MRFSKLKLTGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKSMRGGA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|320093874|ref|ZP_08025715.1| hypothetical protein HMPREF9005_0327 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979191|gb|EFW10693.1| hypothetical protein HMPREF9005_0327 [Actinomyces sp. oral taxon 178 str. F0338] Length = 448 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ R G + Sbjct: 1 MYLKSLTLRGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDALAWVMGEQGARAMRGGN 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|307297606|ref|ZP_07577412.1| chromosome segregation protein SMC [Thermotogales bacterium mesG1.Ag.4.2] gi|306916866|gb|EFN47248.1| chromosome segregation protein SMC [Thermotogales bacterium mesG1.Ag.4.2] Length = 1174 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L + I F+ F + E + +T V G NG GKS++ +AI W+F + + D Sbjct: 1 MLRLNSVYIKGFKSFAMPTRFEVSSGMTAVVGPNGSGKSNVVDAIRWIFGEQSMKNIRAD 60 Query: 86 S 86 S Sbjct: 61 S 61 >gi|92118696|ref|YP_578425.1| chromosome segregation protein SMC [Nitrobacter hamburgensis X14] gi|91801590|gb|ABE63965.1| condensin subunit Smc [Nitrobacter hamburgensis X14] Length = 1170 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 3 MKLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSYKSLRAAD 62 Query: 87 IK 88 ++ Sbjct: 63 ME 64 >gi|163794973|ref|ZP_02188942.1| Chromosome segregation ATPase [alpha proteobacterium BAL199] gi|159179792|gb|EDP64319.1| Chromosome segregation ATPase [alpha proteobacterium BAL199] Length = 1156 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + ++ F+ F + ++ LT V G NG GKS+L EA+ W+ + ++ G Sbjct: 1 MHFSKLRLAGFKSFVDPTEVIIEPGLTGVVGPNGCGKSNLVEALRWVMGESSAKQMRGGG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D I MA Sbjct: 61 MDDIIFGGTTARPKRNMA 78 >gi|85714259|ref|ZP_01045247.1| Chromosome segregation protein SMC [Nitrobacter sp. Nb-311A] gi|85698706|gb|EAQ36575.1| Chromosome segregation protein SMC [Nitrobacter sp. Nb-311A] Length = 1168 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSYKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|296126519|ref|YP_003633771.1| SMC domain protein [Brachyspira murdochii DSM 12563] gi|296018335|gb|ADG71572.1| SMC domain protein [Brachyspira murdochii DSM 12563] Length = 952 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 + ++ + F+ F IEF + +T+V G NG GKS++ EA W+ + R D Sbjct: 1 MYIKNLNLHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDS 60 Query: 86 -----SIKKRSIKTPMPMCMA 101 S+ T P +A Sbjct: 61 SKGLESVIFHGTDTRKPSSLA 81 >gi|332284992|ref|YP_004416903.1| putative chromosome partition protein [Pusillimonas sp. T7-7] gi|330428945|gb|AEC20279.1| putative chromosome partition protein [Pusillimonas sp. T7-7] Length = 1174 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F E I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTQIKLAGFKSFVEPTVIPTPSQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|254464932|ref|ZP_05078343.1| chromosome segregation protein SMC [Rhodobacterales bacterium Y4I] gi|206685840|gb|EDZ46322.1| chromosome segregation protein SMC [Rhodobacterales bacterium Y4I] Length = 1151 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTELVIADGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|75676792|ref|YP_319213.1| chromosome segregation protein SMC [Nitrobacter winogradskyi Nb-255] gi|74421662|gb|ABA05861.1| condensin subunit Smc [Nitrobacter winogradskyi Nb-255] Length = 1168 Score = 76.6 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E A LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEPTDFVIAPGLTGVVGPNGCGKSNLVEALRWAMGETSYKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|307352886|ref|YP_003893937.1| chromosome segregation protein SMC [Methanoplanus petrolearius DSM 11571] gi|307156119|gb|ADN35499.1| chromosome segregation protein SMC [Methanoplanus petrolearius DSM 11571] Length = 1146 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++EI +F+ F + KI F + T+++G NG GKS++ ++I + + R + Sbjct: 1 MYITELEIDNFKSFAKKTKIPFYEGFTVISGPNGSGKSNIIDSILFCLALSSARGLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|163856014|ref|YP_001630312.1| putative chromosome partition protein [Bordetella petrii DSM 12804] gi|163259742|emb|CAP42043.1| putative chromosome partition protein [Bordetella petrii] Length = 1241 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R +L ++++ F+ F + I L V G NG GKS++ +A+ W+ Sbjct: 62 RHRTVRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASEL 121 Query: 83 HGDSIKK 89 G+S++ Sbjct: 122 RGESMQD 128 >gi|300933890|ref|ZP_07149146.1| chromosome segregation protein [Corynebacterium resistens DSM 45100] Length = 1162 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ + V G NG GKS++ +A+ W+ ++ + G Sbjct: 1 MYLKSLTLKGFKSFASSTTLKLEPGICAVVGPNGSGKSNVVDALAWVMGEHSAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|193212154|ref|YP_001998107.1| chromosome segregation protein SMC [Chlorobaculum parvum NCIB 8327] gi|193085631|gb|ACF10907.1| chromosome segregation protein SMC [Chlorobaculum parvum NCIB 8327] Length = 1183 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIELFGFKSFAHRVRIHFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSMLLRSPK 60 Query: 85 -DSIKKRSIKTPMPM 98 +SI K P+ Sbjct: 61 MESIIFNGTKRLKPL 75 >gi|126738031|ref|ZP_01753752.1| SMC protein [Roseobacter sp. SK209-2-6] gi|126720528|gb|EBA17233.1| SMC protein [Roseobacter sp. SK209-2-6] Length = 1151 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F + + D LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLSGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|86137244|ref|ZP_01055822.1| SMC protein [Roseobacter sp. MED193] gi|85826568|gb|EAQ46765.1| SMC protein [Roseobacter sp. MED193] Length = 1151 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|239834808|ref|ZP_04683136.1| SMC domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822871|gb|EEQ94440.1| SMC domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 685 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 33/54 (61%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K +E+ FRGF + +I+F T++ G+NG GKS+L +A+E+ G ++ Sbjct: 1 MKFDYVEVCGFRGFRDKVRIDFGRGFTVITGRNGVGKSTLCDAVEFAITGLIEK 54 >gi|209886101|ref|YP_002289958.1| chromosome segregation protein SMC [Oligotropha carboxidovorans OM5] gi|209874297|gb|ACI94093.1| chromosome segregation protein SMC [Oligotropha carboxidovorans OM5] Length = 1154 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKLTRLRLHGFKSFVEATDFLIEPGLTGVVGPNGCGKSNLVEALRWVMGETSYKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|27377607|ref|NP_769136.1| chromosome segregation protein [Bradyrhizobium japonicum USDA 110] gi|27350752|dbj|BAC47761.1| chromosome segregation protein [Bradyrhizobium japonicum USDA 110] Length = 1154 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKITRLRLHGFKSFVEPTDFVIEPGLTGVVGPNGCGKSNLVEALRWAMGETSYKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|269215481|ref|ZP_06159335.1| putative RecF/RecN/SMC N domain protein [Slackia exigua ATCC 700122] gi|269130968|gb|EEZ62043.1| putative RecF/RecN/SMC N domain protein [Slackia exigua ATCC 700122] Length = 1176 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + ++ +T V G NG GKS++S+A+ W+ + G + Sbjct: 1 MYLKSLTLKGFKSFADRIQLTLEPGMTAVVGPNGSGKSNISDAVLWVLGERNPKHLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297538572|ref|YP_003674341.1| chromosome segregation protein SMC [Methylotenera sp. 301] gi|297257919|gb|ADI29764.1| chromosome segregation protein SMC [Methylotenera sp. 301] Length = 1183 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + V G NG GKS++ E++ W+ + + GDS Sbjct: 1 MRLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESVRWVLGESSAKEMRGDS 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MDAVIFNGSGNRKPISRA 78 >gi|295396040|ref|ZP_06806224.1| chromosome segregation protein Smc [Brevibacterium mcbrellneri ATCC 49030] gi|294971128|gb|EFG47019.1| chromosome segregation protein Smc [Brevibacterium mcbrellneri ATCC 49030] Length = 1170 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F +E +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MFLKTLTMRGFKSFAHATTLELEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|21674524|ref|NP_662589.1| Smc family protein [Chlorobium tepidum TLS] gi|21647717|gb|AAM72931.1| SMC family protein [Chlorobium tepidum TLS] Length = 1183 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F +I F LT + G NG GK+++ +AI W+ Sbjct: 1 MYLSKIELFGFKSFAHRVRIHFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSMLLRSPK 60 Query: 85 -DSIKKRSIKTPMPM 98 ++I K P+ Sbjct: 61 MENIIFNGTKRLKPL 75 >gi|312115733|ref|YP_004013329.1| chromosome segregation protein SMC [Rhodomicrobium vannielii ATCC 17100] gi|311220862|gb|ADP72230.1| chromosome segregation protein SMC [Rhodomicrobium vannielii ATCC 17100] Length = 1152 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 ++ + + F+ F E ++ LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MQITRLRLLGFKSFVEPTELLIGPGLTGVVGPNGCGKSNLLEALRWVMGETSYKTMRASA 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + MA Sbjct: 61 MDDVIFAGTDKRPARNMA 78 >gi|85709148|ref|ZP_01040214.1| SMC protein [Erythrobacter sp. NAP1] gi|85690682|gb|EAQ30685.1| SMC protein [Erythrobacter sp. NAP1] Length = 1140 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++S F+ F E ++ LT V G NG GKS+L EAI W+ + + Sbjct: 1 MQISRLKLSGFKSFVEPAELRIEPGLTGVVGPNGCGKSNLLEAIRWVMGENSPKSMRSGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|333024186|ref|ZP_08452250.1| putative chromosome segregation protein [Streptomyces sp. Tu6071] gi|332744038|gb|EGJ74479.1| putative chromosome segregation protein [Streptomyces sp. Tu6071] Length = 1287 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + F+ F + F +T V G NG GKS++ +A+ W+ + G ++ Sbjct: 1 MTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKSLRGGKMED 58 >gi|110597191|ref|ZP_01385480.1| Chromosome segregation protein SMC [Chlorobium ferrooxidans DSM 13031] gi|110341382|gb|EAT59847.1| Chromosome segregation protein SMC [Chlorobium ferrooxidans DSM 13031] Length = 1178 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 L IE+ F+ F +I F LT + G NG GK+++ +A+ W+ Sbjct: 1 MYLSKIELFGFKSFAHKVRISFDKGLTAIVGPNGCGKTNVVDAMRWVLGEQKSSLLRSAK 60 Query: 85 -DSIKKRSIKTPMPMCM 100 ++I K P+ + Sbjct: 61 MENIIFNGSKNLKPLSL 77 >gi|317401958|gb|EFV82560.1| chromosome partition protein [Achromobacter xylosoxidans C54] Length = 1177 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|311104686|ref|YP_003977539.1| chromosome segregation protein SMC [Achromobacter xylosoxidans A8] gi|310759375|gb|ADP14824.1| chromosome segregation protein SMC [Achromobacter xylosoxidans A8] Length = 1177 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|293603949|ref|ZP_06686363.1| SMC structural maintenance of chromosomes partitioning protein [Achromobacter piechaudii ATCC 43553] gi|292817642|gb|EFF76709.1| SMC structural maintenance of chromosomes partitioning protein [Achromobacter piechaudii ATCC 43553] Length = 1177 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|289208744|ref|YP_003460810.1| chromosome segregation protein SMC [Thioalkalivibrio sp. K90mix] gi|288944375|gb|ADC72074.1| chromosome segregation protein SMC [Thioalkalivibrio sp. K90mix] Length = 1164 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + + + + G NG GKS+ +A+ W+ + + GDS Sbjct: 1 MRLARIKLAGFKSFVDPTTLVLPGNRVGIVGPNGCGKSNTIDAVRWVMGESSAKHLRGDS 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + + P+ A Sbjct: 61 SEDVIFNGSSSRKPVGQA 78 >gi|33594427|ref|NP_882071.1| putative chromosome partition protein [Bordetella pertussis Tohama I] gi|28375457|emb|CAD66592.1| SMC protein [Bordetella pertussis] gi|33564502|emb|CAE43817.1| putative chromosome partition protein [Bordetella pertussis Tohama I] gi|332383838|gb|AEE68685.1| putative chromosome partition protein [Bordetella pertussis CS] Length = 1175 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + I L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGES 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|288923593|ref|ZP_06417703.1| chromosome segregation protein SMC [Frankia sp. EUN1f] gi|288345055|gb|EFC79474.1| chromosome segregation protein SMC [Frankia sp. EUN1f] Length = 1256 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G + Sbjct: 1 MHLKSLTLRGFKSFASSTTLHLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGT 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|158312997|ref|YP_001505505.1| chromosome segregation protein SMC [Frankia sp. EAN1pec] gi|158108402|gb|ABW10599.1| chromosome segregation protein SMC [Frankia sp. EAN1pec] Length = 1263 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +AI W+ + G + Sbjct: 1 MHLKSLTLRGFKSFASSTTLHLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGT 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|296394247|ref|YP_003659131.1| chromosome segregation protein SMC [Segniliparus rotundus DSM 44985] gi|296181394|gb|ADG98300.1| chromosome segregation protein SMC [Segniliparus rotundus DSM 44985] Length = 1171 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + F +T V GQNG GKS++++A+ W+ + G Sbjct: 1 MHLRSLTLKGFKSFAAPTTLVFEPGVTAVVGQNGSGKSNIADALSWVMGEQGAKSLRGAK 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|284032685|ref|YP_003382616.1| chromosome segregation protein SMC [Kribbella flavida DSM 17836] gi|283811978|gb|ADB33817.1| chromosome segregation protein SMC [Kribbella flavida DSM 17836] Length = 1181 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + F+ F + F +T + G NG GKS++ +A+ W+ + G ++ Sbjct: 1 MTLRGFKSFASATTMNFEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGKMED 58 >gi|83313080|ref|YP_423344.1| chromosome segregation ATPase [Magnetospirillum magneticum AMB-1] gi|82947921|dbj|BAE52785.1| Chromosome segregation ATPase [Magnetospirillum magneticum AMB-1] Length = 1154 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + +S F+ F + ++ +T V G NG GKS+L EA+ W+ + R+ G Sbjct: 1 MIQFTKLRLSGFKSFVDPAELVIEPGMTGVVGPNGCGKSNLIEALRWVMGETSARQMRGG 60 Query: 86 SIKK 89 + Sbjct: 61 EMDD 64 >gi|23016160|ref|ZP_00055919.1| COG1196: Chromosome segregation ATPases [Magnetospirillum magnetotacticum MS-1] Length = 1154 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + +S F+ F + ++ +T V G NG GKS+L EA+ W+ + R+ G Sbjct: 1 MIQFTKLRLSGFKSFVDPAELVIEPGMTGVVGPNGCGKSNLIEALRWVMGETSARQMRGG 60 Query: 86 SIKK 89 + Sbjct: 61 EMDD 64 >gi|304320000|ref|YP_003853643.1| chromosome segregation protein [Parvularcula bermudensis HTCC2503] gi|303298903|gb|ADM08502.1| chromosome segregation protein [Parvularcula bermudensis HTCC2503] Length = 1157 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F E E LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MEFQRLRLTGFKSFVEPTDFEIRPGLTGIVGPNGCGKSNLLEALRWVMGATSAKALRAGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|165923882|ref|ZP_02219714.1| chromosome segregation protein SMC [Coxiella burnetii RSA 334] gi|165916667|gb|EDR35271.1| chromosome segregation protein SMC [Coxiella burnetii RSA 334] Length = 1169 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+++ F+ F + I + + G NG GKS++ +A+ W+ + ++ G S Sbjct: 1 MYLKTIKLAGFKTFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQS 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|221633719|ref|YP_002522945.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] gi|221155554|gb|ACM04681.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] Length = 1187 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY---GYTQRRKH 83 +LL + + F+ F + ++ F +T + G NG GKS+L+EAI W+ G R + Sbjct: 3 VRLLRLALLGFKSFADPVELVFDRGITAIVGPNGSGKSNLAEAIAWVLGEQAGSAVRSRR 62 Query: 84 GDSIKKRSIKTPMPMCMA 101 D + + MA Sbjct: 63 ADDVIFAGGPDRPSLGMA 80 >gi|148654508|ref|YP_001274713.1| chromosome segregation protein SMC [Roseiflexus sp. RS-1] gi|148566618|gb|ABQ88763.1| condensin subunit Smc [Roseiflexus sp. RS-1] Length = 1201 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRKH 83 L +EI F+ F EF +T V G NG GKS+L +AI W+ R K Sbjct: 1 MYLRRLEIQGFKTFAGHTLFEFQPGITAVVGPNGSGKSNLVDAIRWVLGEQHPGALRCKR 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + + P A Sbjct: 61 TEDLIFSGGGRRAPAGFA 78 >gi|154251155|ref|YP_001411979.1| chromosome segregation protein SMC [Parvibaculum lavamentivorans DS-1] gi|154155105|gb|ABS62322.1| chromosome segregation protein SMC [Parvibaculum lavamentivorans DS-1] Length = 1153 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + +S F+ F + + LT + G NG GKS+L EA+ W+ + + G Sbjct: 1 MKFNRLRLSGFKSFVDPTDLIIEPGLTGIVGPNGCGKSNLLEAMRWVMGENSFKNMRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|259417170|ref|ZP_05741089.1| chromosome segregation protein SMC [Silicibacter sp. TrichCH4B] gi|259346076|gb|EEW57890.1| chromosome segregation protein SMC [Silicibacter sp. TrichCH4B] Length = 1151 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|16124628|ref|NP_419192.1| smc protein [Caulobacter crescentus CB15] gi|221233316|ref|YP_002515752.1| chromosome partition protein smc [Caulobacter crescentus NA1000] gi|6007012|gb|AAF00713.1|AF172724_1 structural maintenance of chromosomes protein homolog Smc [Caulobacter crescentus CB15] gi|13421528|gb|AAK22360.1| smc protein [Caulobacter crescentus CB15] gi|220962488|gb|ACL93844.1| chromosome partition protein smc [Caulobacter crescentus NA1000] Length = 1147 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MQFQRLRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGANSAKAMRAGG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|99082427|ref|YP_614581.1| chromosome segregation protein SMC [Ruegeria sp. TM1040] gi|99038707|gb|ABF65319.1| Chromosome segregation protein SMC [Ruegeria sp. TM1040] Length = 1151 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|226355769|ref|YP_002785509.1| chromosome partition protein [Deinococcus deserti VCD115] gi|226317759|gb|ACO45755.1| putative chromosome partition protein [Deinococcus deserti VCD115] Length = 1096 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---HGD 85 L I + F+ F + ++EF ++ V G NG GKS++ EAI W+ + R G Sbjct: 2 LHSITLQGFKSFADRTRLEFGPGVSAVIGPNGSGKSNVVEAIRWVTHQARARELRAGRGT 61 Query: 86 SIKKRSIKTPMPMCMA 101 + P+ +A Sbjct: 62 ELIFHGSGGKAPLGLA 77 >gi|294815357|ref|ZP_06774000.1| SMC_N multi-domain protein [Streptomyces clavuligerus ATCC 27064] gi|294327956|gb|EFG09599.1| SMC_N multi-domain protein [Streptomyces clavuligerus ATCC 27064] Length = 1371 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + F+ F + F +T V G NG GKS++ +A+ W+ + G ++ Sbjct: 1 MTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGKMED 58 >gi|299134656|ref|ZP_07027848.1| chromosome segregation protein SMC [Afipia sp. 1NLS2] gi|298590466|gb|EFI50669.1| chromosome segregation protein SMC [Afipia sp. 1NLS2] Length = 1154 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+ F E LT V G NG GKS+L EA+ W + + Sbjct: 1 MKLTRLRLHGFKSFVEATDFLIEPGLTGVVGPNGCGKSNLVEALRWAMGETSYKSLRAAD 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|83594578|ref|YP_428330.1| condensin subunit Smc [Rhodospirillum rubrum ATCC 11170] gi|83577492|gb|ABC24043.1| condensin subunit Smc [Rhodospirillum rubrum ATCC 11170] Length = 1167 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + + + F+ F E ++ LT V G NG GKS++ EA+ W+ + ++ G Sbjct: 1 MLHFTRLRLVGFKSFVEPAELMIEPGLTGVVGPNGCGKSNVVEALRWVMGETSAKQLRGE 60 Query: 85 --DSIKKRSIKTPMPMCMA 101 D + + P +A Sbjct: 61 DMDDVIFGGTASRPPRNVA 79 >gi|291295935|ref|YP_003507333.1| SMC domain-containing protein [Meiothermus ruber DSM 1279] gi|290470894|gb|ADD28313.1| SMC domain protein [Meiothermus ruber DSM 1279] Length = 1074 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 K+ + + F+ F E +EF + + G NG GKS+L EA+ W+ G + GD Sbjct: 1 MKIERLFLQGFKSFGERTSLEFGPGVYGIVGPNGSGKSNLVEALRWVV-GARAKELRGDE 59 Query: 86 --SIKKRSIKTPMPMCMA 101 ++ P+ A Sbjct: 60 AQALLFHGSDGRPPLGFA 77 >gi|13096783|pdb|1E69|A Chain A, Smc Head Domain From Thermotoga Maritima gi|13096784|pdb|1E69|B Chain B, Smc Head Domain From Thermotoga Maritima gi|13096785|pdb|1E69|C Chain C, Smc Head Domain From Thermotoga Maritima gi|13096786|pdb|1E69|D Chain D, Smc Head Domain From Thermotoga Maritima gi|13096787|pdb|1E69|E Chain E, Smc Head Domain From Thermotoga Maritima gi|13096788|pdb|1E69|F Chain F, Smc Head Domain From Thermotoga Maritima Length = 322 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F +++ Sbjct: 1 MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60 Query: 86 --SIKKRSIKTPMP 97 + + P Sbjct: 61 KFDMIFAGSENLPP 74 >gi|86742278|ref|YP_482678.1| chromosome segregation protein SMC [Frankia sp. CcI3] gi|86569140|gb|ABD12949.1| condensin subunit Smc [Frankia sp. CcI3] Length = 1222 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + +T V G NG GKS++ +AI W+ + G + Sbjct: 1 MHLKNLTLRGFKSFASSTSLHLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGT 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|291613929|ref|YP_003524086.1| chromosome segregation protein SMC [Sideroxydans lithotrophicus ES-1] gi|291584041|gb|ADE11699.1| chromosome segregation protein SMC [Sideroxydans lithotrophicus ES-1] Length = 1177 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+++ F+ F + I L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLAHIKLAGFKSFVDPTHIALPGQLVGIVGPNGCGKSNVIDALRWVLGESRASALRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDVIFNGAGTRKPVARA 78 >gi|157364842|ref|YP_001471609.1| chromosome segregation protein SMC [Thermotoga lettingae TMO] gi|157315446|gb|ABV34545.1| chromosome segregation protein SMC [Thermotoga lettingae TMO] Length = 1175 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 35/59 (59%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL+ + +S F+ F K+ FAD +T + G NG GKS++ +AI W+F + ++ + Sbjct: 1 MKLVSMALSGFKSFARPTKLFFADGITAIIGPNGGGKSNIVDAIRWVFGEQSMKQLRAE 59 >gi|114763721|ref|ZP_01443115.1| SMC protein [Pelagibaca bermudensis HTCC2601] gi|114543722|gb|EAU46735.1| SMC protein [Roseovarius sp. HTCC2601] Length = 1151 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + ++ LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSRLRLTGFKSFVDPTDLVISEGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGSG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|269795676|ref|YP_003315131.1| condensin subunit Smc [Sanguibacter keddieii DSM 10542] gi|269097861|gb|ACZ22297.1| condensin subunit Smc [Sanguibacter keddieii DSM 10542] Length = 1213 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKTLTLRGFKSFASATTLNLEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|156740860|ref|YP_001430989.1| chromosome segregation protein SMC [Roseiflexus castenholzii DSM 13941] gi|156232188|gb|ABU56971.1| chromosome segregation protein SMC [Roseiflexus castenholzii DSM 13941] Length = 1200 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRKH 83 L +EI F+ F EF +T V G NG GKS+L +AI W T R K Sbjct: 1 MYLRRLEIQGFKTFAGHTLFEFQPGVTAVVGPNGSGKSNLVDAIRWALGEQHPGTLRCKR 60 Query: 84 GDSIKKRSIKTPMPMCMA 101 + + P A Sbjct: 61 TEDLIFSGGGRRAPAGFA 78 >gi|254500968|ref|ZP_05113119.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] gi|222437039|gb|EEE43718.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] Length = 1156 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I+ F+ F E + D LT V G NG GKS+L EA+ W+ + + Sbjct: 5 MRFSKLRIAGFKSFVEPMEFIIDDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 64 Query: 87 IKK 89 + Sbjct: 65 MDD 67 >gi|284931181|gb|ADC31119.1| Chromosome segregation ATPase SMC [Mycoplasma gallisepticum str. F] Length = 983 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L F+ + + F +H+T + G NG GKS++ +A++W+ + + G Sbjct: 1 MLFLKKFHAQGFKSYADNISFTFDEHVTGIVGPNGSGKSNVVDALKWVLGERSMKNLRGK 60 Query: 85 ---DSIKKRSIKTP 95 D I S + P Sbjct: 61 TSDDVIFFGSQEKP 74 >gi|31544374|ref|NP_852952.1| chromosome segregation ATPase SMC [Mycoplasma gallisepticum str. R(low)] gi|31541218|gb|AAP56520.1| Chromosome segregation ATPase SMC [Mycoplasma gallisepticum str. R(low)] gi|284930416|gb|ADC30355.1| Chromosome segregation ATPase SMC [Mycoplasma gallisepticum str. R(high)] Length = 983 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L F+ + + F +H+T + G NG GKS++ +A++W+ + + G Sbjct: 1 MLFLKKFHAQGFKSYADNISFTFDEHVTGIVGPNGSGKSNVVDALKWVLGERSMKNLRGK 60 Query: 85 ---DSIKKRSIKTP 95 D I S + P Sbjct: 61 TSDDVIFFGSQEKP 74 >gi|154508959|ref|ZP_02044601.1| hypothetical protein ACTODO_01475 [Actinomyces odontolyticus ATCC 17982] gi|153798593|gb|EDN81013.1| hypothetical protein ACTODO_01475 [Actinomyces odontolyticus ATCC 17982] Length = 1191 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + +T V G NG GKS++ +A+ W+ R G Sbjct: 1 MYLKNLTLRGFKSFASATTLALEPGITCVVGPNGSGKSNVVDALAWVMGEQGARALRGGQ 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|206890767|ref|YP_002249782.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742705|gb|ACI21762.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 1148 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ IE++ F+ F E KIE + +T G NG GKS++ +A W+ + R G+ Sbjct: 1 MRIKWIELNGFKSFPERTKIELNEGITCFVGPNGAGKSNIIDAFRWVLGEHNPRILRGEK 60 Query: 87 IKK 89 +++ Sbjct: 61 MEE 63 >gi|197104048|ref|YP_002129425.1| chromosome segregation SMC protein [Phenylobacterium zucineum HLK1] gi|196477468|gb|ACG76996.1| chromosome segregation SMC protein [Phenylobacterium zucineum HLK1] Length = 1147 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +S F+ F + + +T + G NG GKS+L EA+ W+ + + Sbjct: 1 MHFQRLRLSGFKSFVDPTEFRIERGITGIVGPNGCGKSNLLEALRWVMGANSAKAMRAGG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|167647762|ref|YP_001685425.1| SMC domain-containing protein [Caulobacter sp. K31] gi|167350192|gb|ABZ72927.1| SMC domain protein [Caulobacter sp. K31] Length = 682 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 40/81 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L IEI FRGF ++ +I F T++ G+NG GKS+L +A+E+ G + + Sbjct: 1 MRLDFIEICGFRGFRDLVRINFGRGFTVITGRNGVGKSTLCDAVEFAIIGSIDKYAVEKA 60 Query: 87 IKKRSIKTPMPMCMAVPRCKY 107 K+ VP+ Y Sbjct: 61 AKESLSDYLWWRGEGVPKAHY 81 >gi|222147830|ref|YP_002548787.1| chromosome segregation protein [Agrobacterium vitis S4] gi|221734818|gb|ACM35781.1| chromosome segregation protein [Agrobacterium vitis S4] Length = 1153 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFTKLRVVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|163760361|ref|ZP_02167443.1| putative structural maintenance of chromosomes protein [Hoeflea phototrophica DFL-43] gi|162282312|gb|EDQ32601.1| putative structural maintenance of chromosomes protein [Hoeflea phototrophica DFL-43] Length = 1154 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFTKLRVLGFKSFVEPTEFHIERGLTGVVGPNGCGKSNLVEAMRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|167648328|ref|YP_001685991.1| chromosome segregation protein SMC [Caulobacter sp. K31] gi|167350758|gb|ABZ73493.1| chromosome segregation protein SMC [Caulobacter sp. K31] Length = 1153 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MQFQRLRLSGFKSFVEPTEFRIEPGLTGVVGPNGCGKSNLLEALRWVMGANSAKAMRAGG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|260429350|ref|ZP_05783327.1| chromosome segregation protein SMC [Citreicella sp. SE45] gi|260419973|gb|EEX13226.1| chromosome segregation protein SMC [Citreicella sp. SE45] Length = 1169 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 18 ILHFSRLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGA 77 Query: 86 SIKK 89 ++ Sbjct: 78 GMED 81 >gi|307304262|ref|ZP_07584014.1| chromosome segregation protein SMC [Sinorhizobium meliloti BL225C] gi|307320567|ref|ZP_07599982.1| chromosome segregation protein SMC [Sinorhizobium meliloti AK83] gi|306893843|gb|EFN24614.1| chromosome segregation protein SMC [Sinorhizobium meliloti AK83] gi|306902730|gb|EFN33323.1| chromosome segregation protein SMC [Sinorhizobium meliloti BL225C] Length = 1153 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFTRLRLLGFKSFVEPTEFVIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|307941614|ref|ZP_07656969.1| chromosome segregation protein SMC [Roseibium sp. TrichSKD4] gi|307775222|gb|EFO34428.1| chromosome segregation protein SMC [Roseibium sp. TrichSKD4] Length = 1152 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + D LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFSKLRVVGFKSFVEPMEFIIGDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|284045140|ref|YP_003395480.1| SMC domain protein [Conexibacter woesei DSM 14684] gi|283949361|gb|ADB52105.1| SMC domain protein [Conexibacter woesei DSM 14684] Length = 1081 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + K+ F +++V G NG GKS++++A+ W + G S Sbjct: 1 MHLKSLTLKGFKSFPDRTKLAFGSGVSVVVGPNGSGKSNVTDAVLWAMGEQSPLAIRGQS 60 Query: 87 IKK 89 ++ Sbjct: 61 MQD 63 >gi|150395771|ref|YP_001326238.1| chromosome segregation protein SMC [Sinorhizobium medicae WSM419] gi|150027286|gb|ABR59403.1| chromosome segregation protein SMC [Sinorhizobium medicae WSM419] Length = 1153 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFTKLRLLGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|46198851|ref|YP_004518.1| chromosome partition protein smc [Thermus thermophilus HB27] gi|46196474|gb|AAS80891.1| chromosome partition protein smc [Thermus thermophilus HB27] Length = 1008 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + + F+ F + ++F D +T + G NG GKS+L EAI ++ G + G+ + Sbjct: 6 RLDRLVLQGFKSFADRTLLDFPDPVTGIIGPNGSGKSNLVEAIRFV-TGSRAQDLRGEEL 64 Query: 88 K---KRSIKTPMPMCMAVPR 104 K KT P +A R Sbjct: 65 KALLFHGAKTRPPQGVAEVR 84 >gi|55980868|ref|YP_144165.1| chromosome segregation SMC protein [Thermus thermophilus HB8] gi|55772281|dbj|BAD70722.1| chromosome segregation SMC protein [Thermus thermophilus HB8] Length = 1008 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + + F+ F + ++F D +T + G NG GKS+L EAI ++ G + G+ + Sbjct: 6 RLDRLVLQGFKSFADRTLLDFPDPVTGIIGPNGSGKSNLVEAIRFV-TGSRAQDLRGEEL 64 Query: 88 K---KRSIKTPMPMCMAVPR 104 K KT P +A R Sbjct: 65 KALLFHGAKTRPPQGVAEVR 84 >gi|71907362|ref|YP_284949.1| chromosome segregation protein SMC [Dechloromonas aromatica RCB] gi|71846983|gb|AAZ46479.1| Chromosome segregation protein SMC [Dechloromonas aromatica RCB] Length = 1167 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTKLKLAGFKSFVDPTAVAVPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MMDVIFNGSSNRKPVSRA 78 >gi|296445508|ref|ZP_06887464.1| SMC domain protein [Methylosinus trichosporium OB3b] gi|296256913|gb|EFH03984.1| SMC domain protein [Methylosinus trichosporium OB3b] Length = 857 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E LT V G NG GKS+L EA+ W+ + + G Sbjct: 1 MKFQRLRLLGFKSFCESTDFLIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRGSG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|297566459|ref|YP_003685431.1| SMC domain-containing protein [Meiothermus silvanus DSM 9946] gi|296850908|gb|ADH63923.1| SMC domain protein [Meiothermus silvanus DSM 9946] Length = 1080 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 K+ + + F+ F E +EF +T + G NG GKS+L EA+ W+ G R G+ Sbjct: 1 MKIDRLILQGFKSFGERTVLEFGSGVTGIVGPNGSGKSNLVEALRWVV-GAKPRELRGEE 59 Query: 86 --SIKKRSIKTPMPMCMA 101 ++ PM A Sbjct: 60 AQALLFHGSDARAPMPFA 77 >gi|83319729|ref|YP_424468.1| structural maintenance of chromosomes (SMC) superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283615|gb|ABC01547.1| structural maintenance of chromosomes (SMC) superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 988 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I S F+ F ++ ++F +T V G NG GKS++++AI W + + G Sbjct: 1 MLFLKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRWTLGEQSTKTLRGS 60 Query: 86 SIKK 89 + Sbjct: 61 KMDD 64 >gi|331703475|ref|YP_004400162.1| chromosome segregation ATPase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256383895|gb|ACU78465.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. capri str. GM12] gi|256384726|gb|ACU79295.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. capri str. GM12] gi|296455977|gb|ADH22212.1| chromosome segregation protein SMC [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802030|emb|CBW54184.1| Chromosome segregation ATPase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 988 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I S F+ F ++ ++F +T V G NG GKS++++AI W + + G Sbjct: 1 MLFLKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRWTLGEQSTKTLRGS 60 Query: 86 SIKK 89 + Sbjct: 61 KMDD 64 >gi|119898294|ref|YP_933507.1| chromosome segregation protein [Azoarcus sp. BH72] gi|119670707|emb|CAL94620.1| chromosome segregation protein [Azoarcus sp. BH72] Length = 1178 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + +L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLAKLKLAGFKTFVDPTTVLMPGNLVGVVGPNGCGKSNIIDAVRWVLGETRASALRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDVIFNGSTTRKPVSRA 78 >gi|297184344|gb|ADI20461.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L43F08] Length = 1151 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MQFSKLRLTGFKSFVDPTELTIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|94969665|ref|YP_591713.1| chromosome segregation protein SMC [Candidatus Koribacter versatilis Ellin345] gi|94551715|gb|ABF41639.1| condensin subunit Smc [Candidatus Koribacter versatilis Ellin345] Length = 1308 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Query: 36 HFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---DSIKKRS 91 F+ F + +++F D + + G NG GKS++++AI W+ + + G + Sbjct: 11 GFKSFCDRTELKFPGDGIAAIVGPNGCGKSNIADAISWVLGEQSAKSLRGIHMQDVIFAG 70 Query: 92 IKTPMPMCMA 101 + P MA Sbjct: 71 TRDRKPTGMA 80 >gi|56698060|ref|YP_168431.1| SMC protein [Ruegeria pomeroyi DSS-3] gi|56679797|gb|AAV96463.1| SMC protein [Ruegeria pomeroyi DSS-3] Length = 1151 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ F+ F + + AD LT + G NG GKS+L EA+ W+ + G Sbjct: 1 MRFNRLKLTGFKSFVDPTDLIIADGLTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|289643133|ref|ZP_06475262.1| chromosome segregation protein SMC [Frankia symbiont of Datisca glomerata] gi|289507025|gb|EFD27995.1| chromosome segregation protein SMC [Frankia symbiont of Datisca glomerata] Length = 1253 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G + Sbjct: 1 MHLKSLTLRGFKSFASSTTLHLEPGITCVVGPNGSGKSNVVDAMAWVLGEQGAKALRGGT 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|296536550|ref|ZP_06898635.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296263115|gb|EFH09655.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 308 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + I+ F+ F E ++ LT + G NG GKS++ EA+ W R G + Sbjct: 51 LVRLRIAGFKSFAEPTTLDVLPGLTGIVGPNGCGKSNVVEALRWAMGETNARAMRGGEMD 110 Query: 89 K 89 Sbjct: 111 D 111 >gi|42561011|ref|NP_975462.1| P115-like protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492508|emb|CAE77104.1| P115-like protein with SMC_C motif [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320894|gb|ADK69537.1| chromosome segregation protein SMC [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 988 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I S F+ F ++ ++F +T V G NG GKS++++AI W + + G Sbjct: 1 MLFLKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRWTLGEQSTKTLRGS 60 Query: 86 SIKK 89 + Sbjct: 61 KMDD 64 >gi|229821032|ref|YP_002882558.1| chromosome segregation protein SMC [Beutenbergia cavernae DSM 12333] gi|229566945|gb|ACQ80796.1| chromosome segregation protein SMC [Beutenbergia cavernae DSM 12333] Length = 1191 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + +T V G NG GKS++ +A+ W+ + G + Sbjct: 1 MHLRTLTLRGFKSFASATTLHLEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGA 60 Query: 87 IKK 89 + Sbjct: 61 MSD 63 >gi|313665382|ref|YP_004047253.1| chromosome segregation protein SMC [Mycoplasma leachii PG50] gi|312949476|gb|ADR24072.1| chromosome segregation protein SMC [Mycoplasma leachii PG50] Length = 988 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I S F+ F ++ ++F +T V G NG GKS++++AI W + + G Sbjct: 1 MLFLKQIRASGFKSFADLTVMDFNYDMTGVVGPNGSGKSNITDAIRWTLGEQSTKTLRGS 60 Query: 86 SIKK 89 + Sbjct: 61 KMDD 64 >gi|302872006|ref|YP_003840642.1| chromosome segregation protein SMC [Caldicellulosiruptor obsidiansis OB47] gi|302574865|gb|ADL42656.1| chromosome segregation protein SMC [Caldicellulosiruptor obsidiansis OB47] Length = 1177 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI F+ F E +IE +T + G NG GKS++++AI W + + Sbjct: 1 MYIKWLEIYGFKSFCEKTRIELQKGITAIVGPNGCGKSNITDAIRWALGEQSLKILR 57 >gi|315604348|ref|ZP_07879414.1| SMC structural maintenance of chromosomes partitioning protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315314054|gb|EFU62105.1| SMC structural maintenance of chromosomes partitioning protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 1194 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + +T V G NG GKS++ +A+ W+ R G Sbjct: 1 MYLKNLTLRGFKSFASATTLALQPGITCVVGPNGSGKSNVVDALAWVMGEQGARALRGGQ 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|237814967|ref|ZP_04593965.1| chromosome segregation protein SMC [Brucella abortus str. 2308 A] gi|237789804|gb|EEP64014.1| chromosome segregation protein SMC [Brucella abortus str. 2308 A] Length = 1154 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MLMRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRA 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 SGMDDVIFSGSATRPARNTA 80 >gi|17987722|ref|NP_540356.1| chromosome segregation protein SMC2 [Brucella melitensis bv. 1 str. 16M] gi|17983440|gb|AAL52620.1| chromosome segregation protein smc2 [Brucella melitensis bv. 1 str. 16M] Length = 1154 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MLMRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRA 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 SGMDDVIFSGSATRPARNTA 80 >gi|149186058|ref|ZP_01864372.1| chromosome segregation protein [Erythrobacter sp. SD-21] gi|148830089|gb|EDL48526.1| chromosome segregation protein [Erythrobacter sp. SD-21] Length = 1140 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S F+ F E + LT V G NG GKS+L EAI W+ + + Sbjct: 1 MLIKQLRLSGFKSFVEPSTLRIEPGLTGVVGPNGCGKSNLLEAIRWVMGENSPKSMRSGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|328544980|ref|YP_004305089.1| RecF/RecN/SMC N terminal domain [polymorphum gilvum SL003B-26A1] gi|326414722|gb|ADZ71785.1| RecF/RecN/SMC N terminal domain, putative [Polymorphum gilvum SL003B-26A1] Length = 1152 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + D LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRVVGFKSFVEPMEFIIGDGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|269926523|ref|YP_003323146.1| chromosome segregation protein SMC [Thermobaculum terrenum ATCC BAA-798] gi|269790183|gb|ACZ42324.1| chromosome segregation protein SMC [Thermobaculum terrenum ATCC BAA-798] Length = 1181 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ ++I F+ F+ +EF +T + G NG GKS++ EAI W+ + Sbjct: 1 MKINSLKIQGFKSFSNHTLLEFDHGITAIVGPNGSGKSNILEAIRWVLGEQSYSLLR 57 >gi|118590783|ref|ZP_01548184.1| Chromosome segregation ATPase [Stappia aggregata IAM 12614] gi|118436759|gb|EAV43399.1| Chromosome segregation ATPase [Stappia aggregata IAM 12614] Length = 1152 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + I F+ F E + + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFSKLRIVGFKSFVEPMEFIIGNGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|56479085|ref|YP_160674.1| chromosome segregation ATPase [Aromatoleum aromaticum EbN1] gi|56315128|emb|CAI09773.1| chromosome segregation ATPase [Aromatoleum aromaticum EbN1] Length = 1176 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + +L V G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLSKLKLAGFKTFVDPTTVLTPGNLVGVVGPNGCGKSNIIDAVRWVLGETRASALRGES 60 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 61 MQDVIFNGSTTRKPVSRA 78 >gi|241203462|ref|YP_002974558.1| chromosome segregation protein SMC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857352|gb|ACS55019.1| chromosome segregation protein SMC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1153 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|218462074|ref|ZP_03502165.1| chromosome partition protein [Rhizobium etli Kim 5] Length = 445 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|190890715|ref|YP_001977257.1| chromosome partition protein [Rhizobium etli CIAT 652] gi|190695994|gb|ACE90079.1| chromosome partition protein [Rhizobium etli CIAT 652] Length = 1153 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|209548262|ref|YP_002280179.1| chromosome segregation protein SMC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534018|gb|ACI53953.1| chromosome segregation protein SMC [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 1153 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|116250856|ref|YP_766694.1| structural maintenance of chromosomes protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255504|emb|CAK06581.1| putative structural maintenance of chromosomes protein [Rhizobium leguminosarum bv. viciae 3841] Length = 1153 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|86356646|ref|YP_468538.1| chromosome partition protein [Rhizobium etli CFN 42] gi|86280748|gb|ABC89811.1| chromosome partition protein [Rhizobium etli CFN 42] Length = 1153 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|254471690|ref|ZP_05085091.1| chromosome segregation protein SMC [Pseudovibrio sp. JE062] gi|211958892|gb|EEA94091.1| chromosome segregation protein SMC [Pseudovibrio sp. JE062] Length = 1152 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + D LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKFQRLRVLGFKSFVEPMEFVIEDGLTGIVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|254475736|ref|ZP_05089122.1| chromosome segregation protein SMC [Ruegeria sp. R11] gi|214029979|gb|EEB70814.1| chromosome segregation protein SMC [Ruegeria sp. R11] Length = 1151 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|163738210|ref|ZP_02145626.1| Chromosome segregation protein SMC [Phaeobacter gallaeciensis BS107] gi|161388826|gb|EDQ13179.1| Chromosome segregation protein SMC [Phaeobacter gallaeciensis BS107] Length = 1151 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|163743804|ref|ZP_02151177.1| SMC protein [Phaeobacter gallaeciensis 2.10] gi|161382953|gb|EDQ07349.1| SMC protein [Phaeobacter gallaeciensis 2.10] Length = 1151 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|291530281|emb|CBK95866.1| chromosome segregation protein SMC, common bacterial type [Eubacterium siraeum 70/3] Length = 1192 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD Sbjct: 1 MFFKSMEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM A Sbjct: 61 MEDVIFHGTVRRKPMGFA 78 >gi|256372279|ref|YP_003110103.1| SMC domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008863|gb|ACU54430.1| SMC domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 1115 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 27/57 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + F+ F + + F + + G NG GKS++ +A+ W+ + R Sbjct: 1 MRLRALTMRGFKSFADPVTVRFGSGINAIVGPNGSGKSNVVDALTWVLGTQSPRMLR 57 >gi|167751474|ref|ZP_02423601.1| hypothetical protein EUBSIR_02470 [Eubacterium siraeum DSM 15702] gi|167655282|gb|EDR99411.1| hypothetical protein EUBSIR_02470 [Eubacterium siraeum DSM 15702] Length = 1192 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD Sbjct: 1 MFFKSMEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM A Sbjct: 61 MEDVIFHGTVRRKPMGFA 78 >gi|110633125|ref|YP_673333.1| condensin subunit Smc [Mesorhizobium sp. BNC1] gi|110284109|gb|ABG62168.1| condensin subunit Smc [Chelativorans sp. BNC1] Length = 1152 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFTKLRLLGFKSFVEPGEFVIEPGLTGVVGPNGCGKSNLVEALRWVMGESSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|261854789|ref|YP_003262072.1| chromosome segregation protein SMC [Halothiobacillus neapolitanus c2] gi|261835258|gb|ACX95025.1| chromosome segregation protein SMC [Halothiobacillus neapolitanus c2] Length = 1167 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 +L + ++ F+ F +I + G NG GKS+L +AI W+ + ++ G Sbjct: 1 MRLTRLYLAGFKSFAAPTEILLPAERVAIVGPNGCGKSNLIDAIRWVLGESSAKQLRGQS 60 Query: 85 -DSIKKRSIKTPMPMCMAV 102 D + AV Sbjct: 61 LDDVIFAGSGQRPAASQAV 79 >gi|261315262|ref|ZP_05954459.1| SMC protein [Brucella pinnipedialis M163/99/10] gi|261304288|gb|EEY07785.1| SMC protein [Brucella pinnipedialis M163/99/10] Length = 267 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MLMRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRA 60 Query: 85 ---DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 SGMDDVIFSGSATRPARNTA 80 >gi|217970594|ref|YP_002355828.1| chromosome segregation protein SMC [Thauera sp. MZ1T] gi|217507921|gb|ACK54932.1| chromosome segregation protein SMC [Thauera sp. MZ1T] Length = 1234 Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + +L V G NG GKS++ +A+ W+ G+S Sbjct: 27 VRLSKLKLAGFKTFVDPTTVLTPGNLVGVVGPNGCGKSNIIDAVRWVLGETRASALRGES 86 Query: 87 IK---KRSIKTPMPMCMA 101 ++ T P+ A Sbjct: 87 MQDVIFNGSTTRKPVSRA 104 >gi|293192415|ref|ZP_06609526.1| putative RecF/RecN/SMC N domain protein [Actinomyces odontolyticus F0309] gi|292820330|gb|EFF79324.1| putative RecF/RecN/SMC N domain protein [Actinomyces odontolyticus F0309] Length = 476 Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + F+ F + +T V G NG GKS++ +A+ W+ R G Sbjct: 1 MYLKNLTLRGFKSFASATTLVLQPGITCVVGPNGSGKSNVVDALAWVMGEQGARALRGGQ 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|291557096|emb|CBL34213.1| chromosome segregation protein SMC, common bacterial type [Eubacterium siraeum V10Sc8a] Length = 1192 Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +EI F+ F + + F +T V G NG GKS++S+A+ W+ + GD Sbjct: 1 MFFKSMEIYGFKSFPDKTILHFDKRMTAVVGSNGNGKSNISDALRWVMGEQGAKSLRGDK 60 Query: 87 I---KKRSIKTPMPMCMA 101 + PM A Sbjct: 61 MEDVIFHGTVRRKPMGFA 78 >gi|26553935|ref|NP_757869.1| structural maintenance of chromosomes SMC superfamily proteins [Mycoplasma penetrans HF-2] gi|26453943|dbj|BAC44273.1| structural maintenance of chromosomes SMC superfamily proteins [Mycoplasma penetrans HF-2] Length = 984 Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + L E F+ F + K+ F + + G NG GKS++ +AI+W+ + + G Sbjct: 1 MIFLKKFEAIGFKSFADFTKLNFDSTMIGIVGPNGAGKSNVIDAIKWVLGEQSIKSLRGK 60 Query: 85 --DSIKKRSIKTP 95 D I K+ Sbjct: 61 KSDDIIFHGSKSK 73 >gi|294678934|ref|YP_003579549.1| chromosome partition protein Smc [Rhodobacter capsulatus SB 1003] gi|294477754|gb|ADE87142.1| chromosome partition protein Smc [Rhodobacter capsulatus SB 1003] Length = 1152 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G+ Sbjct: 1 MRFTRLRLNGFKSFVDPTDLVIHDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGEG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|253996454|ref|YP_003048518.1| chromosome segregation protein SMC [Methylotenera mobilis JLW8] gi|253983133|gb|ACT47991.1| chromosome segregation protein SMC [Methylotenera mobilis JLW8] Length = 1182 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++S F+ F + + V G NG GKS++ E++ W+ + + D+ Sbjct: 1 MRLTHLKLSGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESVRWVLGESSAKEMRADA 60 Query: 87 I---KKRSIKTPMPMCMA 101 + P+ A Sbjct: 61 MDAVIFNGSGNRKPISRA 78 >gi|118594796|ref|ZP_01552143.1| Chromosome segregation protein SMC [Methylophilales bacterium HTCC2181] gi|118440574|gb|EAV47201.1| Chromosome segregation protein SMC [Methylophilales bacterium HTCC2181] Length = 1164 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I+++ F+ F + I+ L + G NG GKS++ E+++W+ + + G+S Sbjct: 1 MKLRQIKLAGFKTFVDPTTIKLDGELAGIVGPNGCGKSNIMESVKWVLGSSSAKDMRGES 60 Query: 87 I 87 + Sbjct: 61 M 61 >gi|297184263|gb|ADI20381.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L27A02] Length = 1151 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MQFSKLRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|297184040|gb|ADI20160.1| chromosome segregation ATPases [uncultured alpha proteobacterium EB080_L06A09] Length = 1151 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MQFSKLRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|114769591|ref|ZP_01447201.1| SMC protein [alpha proteobacterium HTCC2255] gi|114549296|gb|EAU52178.1| SMC protein [alpha proteobacterium HTCC2255] Length = 1151 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MQFSKLRLTGFKSFVDPTELIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|218680062|ref|ZP_03527959.1| chromosome partition protein [Rhizobium etli CIAT 894] Length = 115 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|217979921|ref|YP_002364068.1| chromosome segregation protein SMC [Methylocella silvestris BL2] gi|217505297|gb|ACK52706.1| chromosome segregation protein SMC [Methylocella silvestris BL2] Length = 1151 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + I+ F+ F + LT V G NG GKS+L EA+ W + + Sbjct: 1 MKFTKLRIAGFKTFVDPTDFLIEPGLTGVVGPNGCGKSNLVEAMRWAMGESSSKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + MA Sbjct: 61 MDDVIFSGGGNRPARNMA 78 >gi|227821139|ref|YP_002825109.1| chromosome segregation protein SMC [Sinorhizobium fredii NGR234] gi|227340138|gb|ACP24356.1| chromosome segregation protein SMC [Sinorhizobium fredii NGR234] Length = 1153 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLLGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|12045154|ref|NP_072965.1| chromosome segregation protein SMC [Mycoplasma genitalium G37] gi|1709512|sp|P47540|P115_MYCGE RecName: Full=Protein P115 homolog gi|1045996|gb|AAC71520.1| chromosome segregation protein SMC [Mycoplasma genitalium G37] gi|166079082|gb|ABY79700.1| chromosome segregation protein SMC [synthetic Mycoplasma genitalium JCVI-1.0] Length = 982 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-- 83 + L F+ + + I+F +T + G NG GKS++ +A++W+ + + Sbjct: 1 MVFLKRFRAYGFKSYADEITIDFTHSMTGIVGPNGSGKSNVVDALKWVLGERSMKHLRSK 60 Query: 84 -GDSIKKRSIKTP 95 GD + K Sbjct: 61 SGDDMIFFGSKDK 73 >gi|172040472|ref|YP_001800186.1| chromosome segregation protein [Corynebacterium urealyticum DSM 7109] gi|171851776|emb|CAQ04752.1| chromosome segregation protein [Corynebacterium urealyticum DSM 7109] Length = 1162 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASSTTLKLEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|182677738|ref|YP_001831884.1| chromosome segregation protein SMC [Beijerinckia indica subsp. indica ATCC 9039] gi|182633621|gb|ACB94395.1| chromosome segregation protein SMC [Beijerinckia indica subsp. indica ATCC 9039] Length = 1150 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + IS F+ F + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKFTKLHISGFKTFVDATDFLIEPGLTGIVGPNGCGKSNLVEAMRWVMGENSFKAMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|261417102|ref|YP_003250785.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] gi|32452356|emb|CAD66598.2| SMC protein [Fibrobacter succinogenes] gi|261373558|gb|ACX76303.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326426|gb|ADL25627.1| chromosome segregation protein SMC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1184 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++I F+ F + +I F LT V G NG GKS++++AI W+ Sbjct: 1 MQITKLKIFGFKSFAQRTEINFPTKGLTAVVGPNGCGKSNITDAIRWVLGEQKAAALRMG 60 Query: 86 SIK---KRSIKTPMPMCMA 101 ++ + M +A Sbjct: 61 KMQDVIFSGTEERAAMSLA 79 >gi|94984929|ref|YP_604293.1| SMC protein-like protein [Deinococcus geothermalis DSM 11300] gi|94555210|gb|ABF45124.1| SMC protein [Deinococcus geothermalis DSM 11300] Length = 1100 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---HGD 85 L I + F+ F + ++EF ++ V G NG GKS++ EA+ W + R G Sbjct: 2 LQSITLQGFKSFADRTRLEFGPGVSAVIGPNGSGKSNVVEALRWATHQARARELRAGRGT 61 Query: 86 SIKKRSIKTPMPMCMA 101 + P+ +A Sbjct: 62 ELIFHGSGGKAPLGLA 77 >gi|323136710|ref|ZP_08071791.1| chromosome segregation protein SMC [Methylocystis sp. ATCC 49242] gi|322398027|gb|EFY00548.1| chromosome segregation protein SMC [Methylocystis sp. ATCC 49242] Length = 1151 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFERLRLLGFKSFCEPTDFLIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|222100368|ref|YP_002534936.1| Condensin subunit Smc [Thermotoga neapolitana DSM 4359] gi|221572758|gb|ACM23570.1| Condensin subunit Smc [Thermotoga neapolitana DSM 4359] Length = 1170 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F +++ Sbjct: 1 MRLKKLFLKGFKSFGRPSLITFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60 Query: 86 --SIKKRSIKTPMP 97 + + P Sbjct: 61 KFDMIFSGSENLPP 74 >gi|304393526|ref|ZP_07375454.1| chromosome segregation protein SMC [Ahrensia sp. R2A130] gi|303294533|gb|EFL88905.1| chromosome segregation protein SMC [Ahrensia sp. R2A130] Length = 1153 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MEFDKLRLLGFKSFVEPTEFSIKAGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASA 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + MA Sbjct: 61 MDDVIFSGSGNRPSRNMA 78 >gi|260578980|ref|ZP_05846882.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602845|gb|EEW16120.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 376 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLKLEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|68536279|ref|YP_250984.1| chromosome segregation protein [Corynebacterium jeikeium K411] gi|68263878|emb|CAI37366.1| chromosome segregation protein [Corynebacterium jeikeium K411] Length = 1162 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F ++ + V G NG GKS++ +A+ W+ + G Sbjct: 1 MHLKSLTLKGFKSFASATTLKLEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|218672534|ref|ZP_03522203.1| chromosome partition protein [Rhizobium etli GR56] Length = 223 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRLVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|330970648|gb|EGH70714.1| SMC-like protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 882 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I +L +E+ HFRGF++ EF + T V G NG GKSSL EA+E+ Sbjct: 80 IVRLTKVEVEHFRGFSDKHTFEFKNPYTFVYGPNGTGKSSLCEALEYGLLASIHE 134 >gi|325830879|ref|ZP_08164263.1| chromosome segregation protein SMC [Eggerthella sp. HGA1] gi|325487286|gb|EGC89729.1| chromosome segregation protein SMC [Eggerthella sp. HGA1] Length = 457 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + + V G NG GKS++S+A+ W+ + G + Sbjct: 1 MYLKSLVLKGFKSFADRSVLALEPGIIAVVGPNGSGKSNISDAVLWVLGERNAKHLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|317488153|ref|ZP_07946727.1| RecF/RecN/SMC N terminal domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912740|gb|EFV34275.1| RecF/RecN/SMC N terminal domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 436 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + + V G NG GKS++S+A+ W+ + G + Sbjct: 1 MYLKSLVLKGFKSFADRSVLALEPGIIAVVGPNGSGKSNISDAVLWVLGERNAKHLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|257791119|ref|YP_003181725.1| chromosome segregation protein SMC [Eggerthella lenta DSM 2243] gi|257475016|gb|ACV55336.1| chromosome segregation protein SMC [Eggerthella lenta DSM 2243] Length = 1186 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + F+ F + + + V G NG GKS++S+A+ W+ + G + Sbjct: 1 MYLKSLVLKGFKSFADRSVLALEPGIIAVVGPNGSGKSNISDAVLWVLGERNAKHLRGQA 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|218295508|ref|ZP_03496321.1| SMC domain protein [Thermus aquaticus Y51MC23] gi|218244140|gb|EED10666.1| SMC domain protein [Thermus aquaticus Y51MC23] Length = 1007 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + + F+ F E ++F D +T + G NG GKS+L EAI ++ G + G + Sbjct: 5 RIDRLTLQGFKSFAERTVLDFPDPITGIIGPNGSGKSNLVEAIRFV-TGARAQELRGQEL 63 Query: 88 K 88 K Sbjct: 64 K 64 >gi|301633364|gb|ADK86918.1| chromosome segregation protein SMC [Mycoplasma pneumoniae FH] Length = 982 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-- 83 + L F+ + + I F +T + G NG GKS++ +A++W+ + + Sbjct: 1 MVFLKRFRAYGFKSYADEITINFTHSMTGIVGPNGSGKSNVVDALKWVLGERSMKHLRSK 60 Query: 84 -GDSIKKRSIKTP 95 GD + K Sbjct: 61 SGDDMIFFGSKDK 73 >gi|13508165|ref|NP_110114.1| SMC family chromosome/DNA binding/protecting protein [Mycoplasma pneumoniae M129] gi|2500795|sp|P75361|P115_MYCPN RecName: Full=Protein P115 homolog gi|1674099|gb|AAB96063.1| SMC family, chromosome/DNA binding/protecting functions [Mycoplasma pneumoniae M129] Length = 982 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-- 83 + L F+ + + I F +T + G NG GKS++ +A++W+ + + Sbjct: 1 MVFLKRFRAYGFKSYADEITINFTHSMTGIVGPNGSGKSNVVDALKWVLGERSMKHLRSK 60 Query: 84 -GDSIKKRSIKTP 95 GD + K Sbjct: 61 SGDDMIFFGSKDK 73 >gi|319784674|ref|YP_004144150.1| chromosome segregation protein SMC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170562|gb|ADV14100.1| chromosome segregation protein SMC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 1153 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + + F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKFSRLRLLGFKSFVEPGEFVIERGLTGIVGPNGCGKSNLVEALRWVMGESSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSGTRPARNTA 78 >gi|260460274|ref|ZP_05808526.1| chromosome segregation protein SMC [Mesorhizobium opportunistum WSM2075] gi|259033919|gb|EEW35178.1| chromosome segregation protein SMC [Mesorhizobium opportunistum WSM2075] Length = 1152 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + + F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKFSRLRLLGFKSFVEPGEFVIERGLTGIVGPNGCGKSNLVEALRWVMGESSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSGTRPARNTA 78 >gi|13476253|ref|NP_107823.1| chromosome segregation SMC protein [Mesorhizobium loti MAFF303099] gi|14027014|dbj|BAB53968.1| chromosome segregation SMC protein [Mesorhizobium loti MAFF303099] Length = 1152 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K + + F+ F E + LT + G NG GKS+L EA+ W+ + + Sbjct: 1 MKFSRLRLLGFKSFVEPGEFVIERGLTGIVGPNGCGKSNLVEALRWVMGESSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSGTRPARNTA 78 >gi|154151724|ref|YP_001405342.1| chromosome segregation protein SMC [Candidatus Methanoregula boonei 6A8] gi|154000276|gb|ABS56699.1| chromosome segregation protein SMC [Methanoregula boonei 6A8] Length = 1146 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 36/64 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++EI +F+ F++ KI F + T+++G NG GKS++ ++I ++ + R + Sbjct: 1 MHITELEIDNFKSFSKKTKIPFLEGFTVISGPNGSGKSNIIDSILFVLALSSSRNLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|114332087|ref|YP_748309.1| chromosome segregation protein SMC [Nitrosomonas eutropha C91] gi|114309101|gb|ABI60344.1| condensin subunit Smc [Nitrosomonas eutropha C91] Length = 1190 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +I+++ F+ F + + +L + G NG GKS++ +A+ W+ G+S Sbjct: 5 LRLTEIKLAGFKTFVDPTVVPVPGNLVGIVGPNGCGKSNVIDAVRWVLGESRASALRGES 64 Query: 87 ---IKKRSIKTPMPMCMA 101 + T P+ A Sbjct: 65 LQDVIFSGSVTRKPVGRA 82 >gi|84514557|ref|ZP_01001921.1| SMC protein [Loktanella vestfoldensis SKA53] gi|84511608|gb|EAQ08061.1| SMC protein [Loktanella vestfoldensis SKA53] Length = 1151 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGEHRASAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|306845125|ref|ZP_07477705.1| chromosome segregation protein SMC [Brucella sp. BO1] gi|306274540|gb|EFM56335.1| chromosome segregation protein SMC [Brucella sp. BO1] Length = 1152 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSKLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|254718670|ref|ZP_05180481.1| chromosome segregation protein SMC [Brucella sp. 83/13] gi|265983651|ref|ZP_06096386.1| chromosome segregation protein SMC [Brucella sp. 83/13] gi|306837781|ref|ZP_07470645.1| chromosome segregation protein SMC [Brucella sp. NF 2653] gi|264662243|gb|EEZ32504.1| chromosome segregation protein SMC [Brucella sp. 83/13] gi|306407122|gb|EFM63337.1| chromosome segregation protein SMC [Brucella sp. NF 2653] Length = 1152 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSKLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|159042719|ref|YP_001531513.1| chromosome segregation protein SMC [Dinoroseobacter shibae DFL 12] gi|157910479|gb|ABV91912.1| chromosome segregation protein SMC [Dinoroseobacter shibae DFL 12] Length = 1150 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTRLRLNGFKSFVDPTDLIIGDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|222085163|ref|YP_002543693.1| chromosome partition protein [Agrobacterium radiobacter K84] gi|221722611|gb|ACM25767.1| chromosome partition protein [Agrobacterium radiobacter K84] Length = 1153 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNRLRLVGFKSFVEPAEFVIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|307154953|ref|YP_003890337.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] gi|306985181|gb|ADN17062.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] Length = 1204 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 33/72 (45%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+SHF+ F I F T+++G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELSHFKSFGGTTSIPFLPGFTVISGPNGSGKSNILDALLFCLGLASSKGMRAE 60 Query: 86 SIKKRSIKTPMP 97 + P Sbjct: 61 RLPDLVNHNHTP 72 >gi|256159209|ref|ZP_05457020.1| chromosome segregation protein SMC [Brucella ceti M490/95/1] gi|256254536|ref|ZP_05460072.1| chromosome segregation protein SMC [Brucella ceti B1/94] gi|261221715|ref|ZP_05935996.1| chromosome segregation protein SMC [Brucella ceti B1/94] gi|265997677|ref|ZP_06110234.1| chromosome segregation protein SMC [Brucella ceti M490/95/1] gi|260920299|gb|EEX86952.1| chromosome segregation protein SMC [Brucella ceti B1/94] gi|262552145|gb|EEZ08135.1| chromosome segregation protein SMC [Brucella ceti M490/95/1] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|256368950|ref|YP_003106456.1| chromosome segregation protein SMC [Brucella microti CCM 4915] gi|255999108|gb|ACU47507.1| chromosome segregation protein SMC [Brucella microti CCM 4915] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|254712944|ref|ZP_05174755.1| chromosome segregation protein SMC [Brucella ceti M644/93/1] gi|254716702|ref|ZP_05178513.1| chromosome segregation protein SMC [Brucella ceti M13/05/1] gi|261218508|ref|ZP_05932789.1| chromosome segregation protein SMC [Brucella ceti M13/05/1] gi|261320642|ref|ZP_05959839.1| chromosome segregation protein SMC [Brucella ceti M644/93/1] gi|260923597|gb|EEX90165.1| chromosome segregation protein SMC [Brucella ceti M13/05/1] gi|261293332|gb|EEX96828.1| chromosome segregation protein SMC [Brucella ceti M644/93/1] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|254701300|ref|ZP_05163128.1| chromosome segregation protein SMC [Brucella suis bv. 5 str. 513] gi|261751842|ref|ZP_05995551.1| chromosome segregation protein SMC [Brucella suis bv. 5 str. 513] gi|261741595|gb|EEY29521.1| chromosome segregation protein SMC [Brucella suis bv. 5 str. 513] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|254693272|ref|ZP_05155100.1| SMC family protein [Brucella abortus bv. 3 str. Tulya] gi|261213522|ref|ZP_05927803.1| chromosome segregation protein SMC [Brucella abortus bv. 3 str. Tulya] gi|260915129|gb|EEX81990.1| chromosome segregation protein SMC [Brucella abortus bv. 3 str. Tulya] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|225852033|ref|YP_002732266.1| chromosome segregation protein SMC [Brucella melitensis ATCC 23457] gi|256044210|ref|ZP_05447117.1| chromosome segregation protein SMC [Brucella melitensis bv. 1 str. Rev.1] gi|256113025|ref|ZP_05453922.1| chromosome segregation protein SMC [Brucella melitensis bv. 3 str. Ether] gi|256264463|ref|ZP_05466995.1| SMC family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563569|ref|ZP_05834055.1| SMC family protein [Brucella melitensis bv. 1 str. 16M] gi|265990626|ref|ZP_06103183.1| chromosome segregation protein SMC [Brucella melitensis bv. 1 str. Rev.1] gi|265994458|ref|ZP_06107015.1| chromosome segregation protein SMC [Brucella melitensis bv. 3 str. Ether] gi|225640398|gb|ACO00312.1| chromosome segregation protein SMC [Brucella melitensis ATCC 23457] gi|260153585|gb|EEW88677.1| SMC family protein [Brucella melitensis bv. 1 str. 16M] gi|262765571|gb|EEZ11360.1| chromosome segregation protein SMC [Brucella melitensis bv. 3 str. Ether] gi|263001410|gb|EEZ13985.1| chromosome segregation protein SMC [Brucella melitensis bv. 1 str. Rev.1] gi|263094794|gb|EEZ18532.1| SMC family protein [Brucella melitensis bv. 2 str. 63/9] gi|326408527|gb|ADZ65592.1| chromosome segregation protein SMC [Brucella melitensis M28] gi|326538244|gb|ADZ86459.1| chromosome segregation protein SMC [Brucella melitensis M5-90] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|161618470|ref|YP_001592357.1| chromosome segregation protein SMC [Brucella canis ATCC 23365] gi|254703845|ref|ZP_05165673.1| chromosome segregation protein SMC [Brucella suis bv. 3 str. 686] gi|260566901|ref|ZP_05837371.1| SMC family protein [Brucella suis bv. 4 str. 40] gi|261754497|ref|ZP_05998206.1| chromosome segregation protein SMC [Brucella suis bv. 3 str. 686] gi|161335281|gb|ABX61586.1| chromosome segregation protein SMC [Brucella canis ATCC 23365] gi|260156419|gb|EEW91499.1| SMC family protein [Brucella suis bv. 4 str. 40] gi|261744250|gb|EEY32176.1| chromosome segregation protein SMC [Brucella suis bv. 3 str. 686] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|153007958|ref|YP_001369173.1| chromosome segregation protein SMC [Ochrobactrum anthropi ATCC 49188] gi|151559846|gb|ABS13344.1| chromosome segregation protein SMC [Ochrobactrum anthropi ATCC 49188] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|148560462|ref|YP_001258510.1| chromosome segregation protein SMC [Brucella ovis ATCC 25840] gi|163842779|ref|YP_001627183.1| chromosome segregation protein SMC [Brucella suis ATCC 23445] gi|254709640|ref|ZP_05171451.1| chromosome segregation protein SMC [Brucella pinnipedialis B2/94] gi|256031133|ref|ZP_05444747.1| chromosome segregation protein SMC [Brucella pinnipedialis M292/94/1] gi|256060630|ref|ZP_05450796.1| chromosome segregation protein SMC [Brucella neotomae 5K33] gi|260168264|ref|ZP_05755075.1| chromosome segregation protein SMC [Brucella sp. F5/99] gi|261317173|ref|ZP_05956370.1| chromosome segregation protein SMC [Brucella pinnipedialis B2/94] gi|261324627|ref|ZP_05963824.1| chromosome segregation protein SMC [Brucella neotomae 5K33] gi|261757728|ref|ZP_06001437.1| SMC family protein [Brucella sp. F5/99] gi|265988211|ref|ZP_06100768.1| chromosome segregation protein SMC [Brucella pinnipedialis M292/94/1] gi|294851872|ref|ZP_06792545.1| chromosome segregation protein SMC [Brucella sp. NVSL 07-0026] gi|148371719|gb|ABQ61698.1| chromosome segregation protein SMC [Brucella ovis ATCC 25840] gi|163673502|gb|ABY37613.1| chromosome segregation protein SMC [Brucella suis ATCC 23445] gi|261296396|gb|EEX99892.1| chromosome segregation protein SMC [Brucella pinnipedialis B2/94] gi|261300607|gb|EEY04104.1| chromosome segregation protein SMC [Brucella neotomae 5K33] gi|261737712|gb|EEY25708.1| SMC family protein [Brucella sp. F5/99] gi|264660408|gb|EEZ30669.1| chromosome segregation protein SMC [Brucella pinnipedialis M292/94/1] gi|294820461|gb|EFG37460.1| chromosome segregation protein SMC [Brucella sp. NVSL 07-0026] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|23501398|ref|NP_697525.1| SMC family protein [Brucella suis 1330] gi|23347295|gb|AAN29440.1| SMC family protein [Brucella suis 1330] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|62289478|ref|YP_221271.1| SMC family protein [Brucella abortus bv. 1 str. 9-941] gi|82699403|ref|YP_413977.1| ATP/GTP-binding domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|189023727|ref|YP_001934495.1| SMC family protein [Brucella abortus S19] gi|254688789|ref|ZP_05152043.1| SMC family protein [Brucella abortus bv. 6 str. 870] gi|254696919|ref|ZP_05158747.1| SMC family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729821|ref|ZP_05188399.1| SMC family protein [Brucella abortus bv. 4 str. 292] gi|256257035|ref|ZP_05462571.1| SMC family protein [Brucella abortus bv. 9 str. C68] gi|260545770|ref|ZP_05821511.1| SMC family protein [Brucella abortus NCTC 8038] gi|260754276|ref|ZP_05866624.1| chromosome segregation protein SMC [Brucella abortus bv. 6 str. 870] gi|260757495|ref|ZP_05869843.1| chromosome segregation protein SMC [Brucella abortus bv. 4 str. 292] gi|260761320|ref|ZP_05873663.1| chromosome segregation protein SMC [Brucella abortus bv. 2 str. 86/8/59] gi|260883300|ref|ZP_05894914.1| chromosome segregation protein SMC [Brucella abortus bv. 9 str. C68] gi|297247891|ref|ZP_06931609.1| chromosome segregation protein SMC [Brucella abortus bv. 5 str. B3196] gi|62195610|gb|AAX73910.1| SMC family protein [Brucella abortus bv. 1 str. 9-941] gi|82615504|emb|CAJ10478.1| Disease resistance protein:ATP/GTP-binding site motif A (P-loop):Peptidase family S16:SMC protein, N-terminal:Structural main [Brucella melitensis biovar Abortus 2308] gi|189019299|gb|ACD72021.1| SMC family protein [Brucella abortus S19] gi|260097177|gb|EEW81052.1| SMC family protein [Brucella abortus NCTC 8038] gi|260667813|gb|EEX54753.1| chromosome segregation protein SMC [Brucella abortus bv. 4 str. 292] gi|260671752|gb|EEX58573.1| chromosome segregation protein SMC [Brucella abortus bv. 2 str. 86/8/59] gi|260674384|gb|EEX61205.1| chromosome segregation protein SMC [Brucella abortus bv. 6 str. 870] gi|260872828|gb|EEX79897.1| chromosome segregation protein SMC [Brucella abortus bv. 9 str. C68] gi|297175060|gb|EFH34407.1| chromosome segregation protein SMC [Brucella abortus bv. 5 str. B3196] Length = 1152 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|254293428|ref|YP_003059451.1| chromosome segregation protein SMC [Hirschia baltica ATCC 49814] gi|254041959|gb|ACT58754.1| chromosome segregation protein SMC [Hirschia baltica ATCC 49814] Length = 1165 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++I F+ F + + LT + G NG GKS++ E++ W+ + R G Sbjct: 1 MHFTGLKIVGFKSFADPVDFAIREGLTGIVGPNGCGKSNILESLRWVMGATSARAMRGGE 60 Query: 87 IKKR 90 + Sbjct: 61 MDDL 64 >gi|255595159|ref|XP_002536238.1| conserved hypothetical protein [Ricinus communis] gi|223520335|gb|EEF26146.1| conserved hypothetical protein [Ricinus communis] Length = 344 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 31/55 (56%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I +L +E+ HFRGF+E EF + T V G NG GKSSL EA+E+ Sbjct: 80 IVRLTKLEVEHFRGFSEKHTFEFKNPYTFVYGPNGTGKSSLCEALEYGLLASIHE 134 >gi|15643938|ref|NP_228987.1| chromosome segregation SMC protein, putative [Thermotoga maritima MSB8] gi|4981731|gb|AAD36257.1|AE001774_14 chromosome segregation SMC protein, putative [Thermotoga maritima MSB8] Length = 1170 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F +++ Sbjct: 1 MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60 Query: 86 --SIKKRSIKTPMP 97 + + P Sbjct: 61 KFDMIFAGSENLPP 74 >gi|302383808|ref|YP_003819631.1| chromosome segregation protein SMC [Brevundimonas subvibrioides ATCC 15264] gi|302194436|gb|ADL02008.1| chromosome segregation protein SMC [Brevundimonas subvibrioides ATCC 15264] Length = 1145 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F + +++ LT V G NG GKS++ E++ W+ + + G Sbjct: 1 MQFQRLRLVGFKSFVDPAEVQIEPGLTGVVGPNGCGKSNVLESMRWVMGANSAKAMRGTG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + P A Sbjct: 61 MDDVIFAGASNRPPRNHA 78 >gi|325282892|ref|YP_004255433.1| SMC domain-containing protein [Deinococcus proteolyticus MRP] gi|324314701|gb|ADY25816.1| SMC domain protein [Deinococcus proteolyticus MRP] Length = 1101 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + F+ F++ IEF +T V G NG GKS++ EA+ W+ +G R Sbjct: 2 IDSLTLHGFKSFSQRTHIEFEPGITAVIGPNGSGKSNVVEALRWVTHGARARELR 56 >gi|50365048|ref|YP_053473.1| structural maintenance of chromosomes smc superfamily protein [Mesoplasma florum L1] gi|50363604|gb|AAT75589.1| structural maintenance of chromosomes smc superfamily protein [Mesoplasma florum L1] Length = 995 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L I F+ F E + F + V G NG GKS+++++I W + + G Sbjct: 1 MLFLKQIRAVGFKSFAEPTTLNFTKEMIGVVGPNGSGKSNITDSIRWALGEQSTKSLRGA 60 Query: 86 SIKK 89 ++ Sbjct: 61 NMDD 64 >gi|325292183|ref|YP_004278047.1| chromosome segregation protein [Agrobacterium sp. H13-3] gi|325060036|gb|ADY63727.1| chromosome segregation protein [Agrobacterium sp. H13-3] Length = 1155 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRVVGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|159184469|ref|NP_353825.2| chromosome segregation protein [Agrobacterium tumefaciens str. C58] gi|159139780|gb|AAK86610.2| chromosome segregation protein [Agrobacterium tumefaciens str. C58] Length = 1155 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MKFNKLRVVGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|320161646|ref|YP_004174871.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] gi|319995500|dbj|BAJ64271.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] Length = 1202 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---D 85 L +E+ ++ F EF +T + G NG GKS++++A+ W+ + G + Sbjct: 4 LKSLELHGYKTFASRTLFEFPGMVTAIVGPNGSGKSNIADAVRWVLGEQSFSLLRGRKTE 63 Query: 86 SIKKRSIKTPMPMCMA 101 + + MA Sbjct: 64 DMIFSGSELRPRAGMA 79 >gi|170289417|ref|YP_001739655.1| chromosome segregation protein SMC [Thermotoga sp. RQ2] gi|281412999|ref|YP_003347078.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10] gi|170176920|gb|ACB09972.1| chromosome segregation protein SMC [Thermotoga sp. RQ2] gi|281374102|gb|ADA67664.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10] Length = 1170 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F +++ Sbjct: 1 MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60 Query: 86 --SIKKRSIKTPMP 97 + + P Sbjct: 61 KFDMIFAGSENLPP 74 >gi|148270693|ref|YP_001245153.1| chromosome segregation protein SMC [Thermotoga petrophila RKU-1] gi|147736237|gb|ABQ47577.1| condensin subunit Smc [Thermotoga petrophila RKU-1] Length = 1170 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 +L + + F+ F I F+D +T + G NG GKS++ +AI+W+F +++ Sbjct: 1 MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60 Query: 86 --SIKKRSIKTPMP 97 + + P Sbjct: 61 KFDMIFAGSENLPP 74 >gi|89052865|ref|YP_508316.1| chromosome segregation protein SMC [Jannaschia sp. CCS1] gi|88862414|gb|ABD53291.1| Chromosome segregation protein SMC [Jannaschia sp. CCS1] Length = 1151 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTKLRLNGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|16329963|ref|NP_440691.1| chromosome segregation protein SMC1 [Synechocystis sp. PCC 6803] gi|1652449|dbj|BAA17371.1| chromosome segregation protein SMC1 [Synechocystis sp. PCC 6803] Length = 1200 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVYVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKRSIKT 94 + T Sbjct: 61 RLPDLVNNT 69 >gi|30250214|ref|NP_842284.1| chromosome segregation ATPase [Nitrosomonas europaea ATCC 19718] gi|30181009|emb|CAD86196.1| Chromosome segregation ATPases [Nitrosomonas europaea ATCC 19718] gi|42627761|tpe|CAD66176.1| TPA: SMC protein [Nitrosomonas europaea] Length = 1175 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +I+++ F+ F + + +L + G NG GKS++ +A+ W+ G+S Sbjct: 1 MRLTEIKLAGFKTFVDPAVVPVPGNLVGIVGPNGCGKSNVIDAVRWVLGESRASALRGES 60 Query: 87 ---IKKRSIKTPMPMCMA 101 + T P+ A Sbjct: 61 LQDVIFNGSATRKPIGRA 78 >gi|282857424|ref|ZP_06266657.1| RecF/RecN/SMC family protein [Pyramidobacter piscolens W5455] gi|282584709|gb|EFB90044.1| RecF/RecN/SMC family protein [Pyramidobacter piscolens W5455] Length = 879 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ F ++ FA T + G NG GKS++ + + W+ R Sbjct: 1 MFIERLTLKNFKSFGGTHELPFAPGFTAIVGPNGSGKSNILDGLRWVLGESGAARLR 57 >gi|294084668|ref|YP_003551426.1| chromosome segregation ATPase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664241|gb|ADE39342.1| Chromosome segregation ATPase [Candidatus Puniceispirillum marinum IMCC1322] Length = 1132 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---DSIKKR 90 ++ F+ F E+ ++E LT + G NG GKS++ E + W+ + R+ G D + Sbjct: 1 MAGFKSFAEVAEVEIESGLTGIVGPNGCGKSNVVEGLRWVMGESSARQMRGGEMDDVIFA 60 Query: 91 SIKTPMPMCMA 101 +A Sbjct: 61 GTDQRPARNLA 71 >gi|237745523|ref|ZP_04576003.1| chromosome segregation protein [Oxalobacter formigenes HOxBLS] gi|229376874|gb|EEO26965.1| chromosome segregation protein [Oxalobacter formigenes HOxBLS] Length = 1170 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +S F+ F + I+ L V G NG GKS++ +A+ W+ G+S+K Sbjct: 1 MSGFKSFVDPTTIQIGGKLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGESMKD 56 >gi|218441332|ref|YP_002379661.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424] gi|218174060|gb|ACK72793.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424] Length = 1190 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+SHF+ F I F T+++G NG GKS++ +A+ + T + + Sbjct: 1 MVHIKRVELSHFKSFGGTTSIPFLPGFTVISGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|254707775|ref|ZP_05169603.1| chromosome segregation protein SMC [Brucella pinnipedialis M163/99/10] Length = 265 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + + + F+ F E + LT V G NG GKS+L EA+ W+ + + Sbjct: 1 MRFSRLRLVGFKSFVEPMEFVIEGGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG 60 Query: 85 -DSIKKRSIKTPMPMCMA 101 D + T A Sbjct: 61 MDDVIFSGSATRPARNTA 78 >gi|163744745|ref|ZP_02152105.1| chromosome segregation protein, putative [Oceanibulbus indolifex HEL-45] gi|161381563|gb|EDQ05972.1| chromosome segregation protein, putative [Oceanibulbus indolifex HEL-45] Length = 1151 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLTGFKSFVDPTDLVISDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254459768|ref|ZP_05073184.1| chromosome segregation protein SMC [Rhodobacterales bacterium HTCC2083] gi|206676357|gb|EDZ40844.1| chromosome segregation protein SMC [Rhodobacteraceae bacterium HTCC2083] Length = 1151 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLKLQGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|166363849|ref|YP_001656122.1| chromosome segregation protein [Microcystis aeruginosa NIES-843] gi|166086222|dbj|BAG00930.1| chromosome segregation protein [Microcystis aeruginosa NIES-843] Length = 1176 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVYIKKVELSHFKSFGGTTPIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|159030905|emb|CAO88586.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1176 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVYIKKVELSHFKSFGGTTPIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|149201407|ref|ZP_01878382.1| SMC protein [Roseovarius sp. TM1035] gi|149145740|gb|EDM33766.1| SMC protein [Roseovarius sp. TM1035] Length = 1151 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + A LT V G NG GKS+L EA+ W+ GD Sbjct: 1 MQFSKLRLTGFKSFVDPTDLIIARGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGDG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|126179774|ref|YP_001047739.1| chromosome segregation protein SMC [Methanoculleus marisnigri JR1] gi|125862568|gb|ABN57757.1| condensin subunit Smc [Methanoculleus marisnigri JR1] Length = 1147 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +EI +F+ F KI F + T+V+G NG GKS++ +++ ++ R + Sbjct: 1 MYITQLEIDNFKSFARKTKIPFFEGFTVVSGPNGSGKSNIIDSLLFVLALSGARGLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|163733899|ref|ZP_02141341.1| chromosome segregation protein, putative [Roseobacter litoralis Och 149] gi|161393010|gb|EDQ17337.1| chromosome segregation protein, putative [Roseobacter litoralis Och 149] Length = 1151 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|219851402|ref|YP_002465834.1| chromosome segregation protein SMC [Methanosphaerula palustris E1-9c] gi|219545661|gb|ACL16111.1| chromosome segregation protein SMC [Methanosphaerula palustris E1-9c] Length = 1146 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++EI +F+ F I F + T+V+G NG GKS++ +AI ++ + R + Sbjct: 1 MFIKELEIDNFKSFGRKTTIPFFEGFTVVSGPNGSGKSNIIDAILFVLALSSSRNLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|158425882|ref|YP_001527174.1| chromosome segregation protein [Azorhizobium caulinodans ORS 571] gi|158332771|dbj|BAF90256.1| chromosome segregation protein [Azorhizobium caulinodans ORS 571] Length = 1150 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + + Sbjct: 1 MKFNRLRLVGFKTFVEPTDLLIEPGLTGVVGPNGCGKSNLVEALRWVMGESSHKAFRAND 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|84500325|ref|ZP_00998591.1| SMC protein [Oceanicola batsensis HTCC2597] gi|84392259|gb|EAQ04527.1| SMC protein [Oceanicola batsensis HTCC2597] Length = 1151 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLTGFKSFVDPTDLLIHDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|320334437|ref|YP_004171148.1| SMC domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755726|gb|ADV67483.1| SMC domain protein [Deinococcus maricopensis DSM 21211] Length = 1095 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---HGD 85 + I + F+ F + ++EF +T V G NG GKS++ EAI W + R Sbjct: 2 IASITLQGFKSFADRVRLEFGPGVTAVIGPNGSGKSNVVEAIRWATHNARARELRAGRAT 61 Query: 86 SIKKRSIKTPMPMCMA 101 + P+ +A Sbjct: 62 ELIFHGSGGKAPLGLA 77 >gi|83855048|ref|ZP_00948578.1| SMC protein [Sulfitobacter sp. NAS-14.1] gi|83842891|gb|EAP82058.1| SMC protein [Sulfitobacter sp. NAS-14.1] Length = 1151 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLTGFKSFVDPTDLIISDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|83941571|ref|ZP_00954033.1| SMC protein [Sulfitobacter sp. EE-36] gi|83847391|gb|EAP85266.1| SMC protein [Sulfitobacter sp. EE-36] Length = 1151 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + +D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLTGFKSFVDPTDLIISDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|240142897|ref|YP_002967410.1| chromosome segregation-like (SMC) protein [Methylobacterium extorquens AM1] gi|240012844|gb|ACS44069.1| chromosome segregation-like (SMC) protein [Methylobacterium extorquens AM1] Length = 1146 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + I F+ F + K+ T V G NG GKS+L EAI W + G Sbjct: 1 MRINGLVIDGFKSFADRVKLPIEAGTTGVVGPNGCGKSNLLEAIRWAMGEHRVAEFRGSG 60 Query: 87 IKK-----RSIKTPMPMC 99 ++ ++ +C Sbjct: 61 MEDVIFAGTQRRSERSIC 78 >gi|289597054|ref|YP_003483750.1| chromosome segregation protein SMC [Aciduliprofundum boonei T469] gi|289534841|gb|ADD09188.1| chromosome segregation protein SMC [Aciduliprofundum boonei T469] Length = 1184 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +F+ F ++EF + T ++G NG GKS++++AI ++ + ++ Sbjct: 7 MYLKAIELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAILFVLGPKSSKKIRAQR 66 Query: 87 IKKR 90 + Sbjct: 67 LTDL 70 >gi|284929413|ref|YP_003421935.1| condensin subunit Smc [cyanobacterium UCYN-A] gi|284809857|gb|ADB95554.1| condensin subunit Smc [cyanobacterium UCYN-A] Length = 1198 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHIKRIELSHFKSFGGTTSIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGLRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|254167241|ref|ZP_04874094.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] gi|197624097|gb|EDY36659.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] Length = 1178 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +F+ F ++EF + T ++G NG GKS++++AI ++ + ++ Sbjct: 1 MYLKAIELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAILFVLGPKSSKKIRAQR 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|146276201|ref|YP_001166360.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17025] gi|145554442|gb|ABP69055.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17025] Length = 1170 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 20 LRFTRLRLNGFKSFVDPTDLVIHDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 79 Query: 87 IKK 89 ++ Sbjct: 80 MED 82 >gi|254167742|ref|ZP_04874592.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] gi|197623270|gb|EDY35835.1| SMC proteins Flexible Hinge Domain [Aciduliprofundum boonei T469] Length = 1178 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +F+ F ++EF + T ++G NG GKS++++AI ++ + ++ Sbjct: 1 MYLKAIELENFKSFGRKTRLEFKEGFTAISGPNGSGKSNITDAILFVLGPKSSKKIRAQR 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|319941615|ref|ZP_08015939.1| hypothetical protein HMPREF9464_01158 [Sutterella wadsworthensis 3_1_45B] gi|319804845|gb|EFW01699.1| hypothetical protein HMPREF9464_01158 [Sutterella wadsworthensis 3_1_45B] Length = 1190 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I+ F+ F + IE D L + G NG GKS++ +A+ W+ G S Sbjct: 1 MHLRQIKIAGFKSFADPVVIELRDPLIAIVGPNGCGKSNIIDAVRWVLGEGRIGELRGSS 60 >gi|91775754|ref|YP_545510.1| condensin subunit Smc [Methylobacillus flagellatus KT] gi|91709741|gb|ABE49669.1| condensin subunit Smc [Methylobacillus flagellatus KT] Length = 1168 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ F+ F + + V G NG GKS++ E+I W+ + + +S Sbjct: 1 MRLTHLKLAGFKSFVDPTTLHIHGQRVGVVGPNGCGKSNVMESIRWVLGESSAKEMRSES 60 Query: 87 IKK 89 + Sbjct: 61 MAD 63 >gi|58040431|ref|YP_192395.1| chromosome partition protein Smc [Gluconobacter oxydans 621H] gi|58002845|gb|AAW61739.1| Chromosome partition protein Smc [Gluconobacter oxydans 621H] Length = 1511 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---D 85 + + I F+ F + +++ LT + G NG GKS++ E + W + R G D Sbjct: 8 IDRLSIGGFKSFADEVRLDILPGLTGIIGPNGCGKSNVVEGLRWAMGETSARALRGGELD 67 Query: 86 SIKKRSIKTPMPMCMA 101 + +A Sbjct: 68 DLIFAGTGARSARNIA 83 >gi|255263544|ref|ZP_05342886.1| chromosome segregation protein SMC [Thalassiobium sp. R2A62] gi|255105879|gb|EET48553.1| chromosome segregation protein SMC [Thalassiobium sp. R2A62] Length = 1151 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|126733815|ref|ZP_01749562.1| chromosome segregation protein, putative [Roseobacter sp. CCS2] gi|126716681|gb|EBA13545.1| chromosome segregation protein, putative [Roseobacter sp. CCS2] Length = 1151 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|110678649|ref|YP_681656.1| chromosome segregation protein, putative [Roseobacter denitrificans OCh 114] gi|109454765|gb|ABG30970.1| chromosome segregation protein, putative [Roseobacter denitrificans OCh 114] Length = 1169 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 17 IAVRFSKLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRG 76 Query: 85 DSIKK 89 ++ Sbjct: 77 GGMED 81 >gi|298294365|ref|YP_003696304.1| chromosome segregation protein SMC [Starkeya novella DSM 506] gi|296930876|gb|ADH91685.1| chromosome segregation protein SMC [Starkeya novella DSM 506] Length = 1150 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E ++ LT + G NG GKS+L EA+ W+ + + + Sbjct: 1 MKFTRLRLVGFKTFVEPTEMLIEPGLTGIVGPNGCGKSNLVEAMRWVMGESSYKAMRAEG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|154245924|ref|YP_001416882.1| chromosome segregation protein SMC [Xanthobacter autotrophicus Py2] gi|154160009|gb|ABS67225.1| chromosome segregation protein SMC [Xanthobacter autotrophicus Py2] Length = 1150 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + F+ F E + LT V G NG GKS+L EA+ W+ + + + Sbjct: 1 MKFDRLRLVGFKTFVEPTDLLIEPGLTGVVGPNGCGKSNLVEALRWVMGESSYKAMRAND 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254486515|ref|ZP_05099720.1| chromosome segregation protein SMC [Roseobacter sp. GAI101] gi|214043384|gb|EEB84022.1| chromosome segregation protein SMC [Roseobacter sp. GAI101] Length = 1156 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + AD LT V G NG GKS+L EA+ W+ G Sbjct: 6 LRFSKLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 65 Query: 87 IKK 89 ++ Sbjct: 66 MED 68 >gi|88601344|ref|YP_501522.1| chromosome segregation protein SMC [Methanospirillum hungatei JF-1] gi|88186806|gb|ABD39803.1| condensin subunit Smc [Methanospirillum hungatei JF-1] Length = 1146 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +EI +F+ F KI F T+++G NG GKS++ ++I ++ + R + Sbjct: 1 MHITQLEIDNFKSFGRKTKIPFLPGFTVISGPNGSGKSNIIDSILFVLALSSSRHLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|257059354|ref|YP_003137242.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] gi|256589520|gb|ACV00407.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] Length = 1226 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHIKRIELSHFKSFGGTTSIPFLTGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|154249899|ref|YP_001410724.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1] gi|154153835|gb|ABS61067.1| chromosome segregation protein SMC [Fervidobacterium nodosum Rt17-B1] Length = 1164 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---D 85 L +I I F+ F E ++E ++ +T + G NG GKS++ +AI W+ + + + Sbjct: 3 LKEIFIKGFKSFAEPVRLEISNRVTAIVGPNGSGKSNVVDAIRWVLGEQSMKEIRAQERE 62 Query: 86 SIKKRSIKTPMPMCMA 101 + + P A Sbjct: 63 DVVFWGNEKKPPAQFA 78 >gi|254451492|ref|ZP_05064929.1| chromosome segregation protein SMC [Octadecabacter antarcticus 238] gi|198265898|gb|EDY90168.1| chromosome segregation protein SMC [Octadecabacter antarcticus 238] Length = 1151 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSRLRLNGFKSFVDPTDLIIQDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|254437428|ref|ZP_05050922.1| chromosome segregation protein SMC [Octadecabacter antarcticus 307] gi|198252874|gb|EDY77188.1| chromosome segregation protein SMC [Octadecabacter antarcticus 307] Length = 1151 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFSRLRLNGFKSFVDPTDLIIQDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|332559345|ref|ZP_08413667.1| chromosome segregation protein SMC [Rhodobacter sphaeroides WS8N] gi|332277057|gb|EGJ22372.1| chromosome segregation protein SMC [Rhodobacter sphaeroides WS8N] Length = 1151 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTRLRLNGFKSFVDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|221640348|ref|YP_002526610.1| Chromosome segregation protein SMC [Rhodobacter sphaeroides KD131] gi|221161129|gb|ACM02109.1| Chromosome segregation protein SMC [Rhodobacter sphaeroides KD131] Length = 1151 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTRLRLNGFKSFVDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|77464456|ref|YP_353960.1| chromosome segregation protein SMC2 [Rhodobacter sphaeroides 2.4.1] gi|28375559|emb|CAD66603.1| SMC protein [Rhodobacter sphaeroides] gi|77388874|gb|ABA80059.1| Chromosome segregation protein SMC2 [Rhodobacter sphaeroides 2.4.1] Length = 1151 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTRLRLNGFKSFVDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|218246306|ref|YP_002371677.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] gi|218166784|gb|ACK65521.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] Length = 1226 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHIKRIELSHFKSFGGTTSIPFLTGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|237725014|ref|ZP_04555495.1| predicted protein [Bacteroides sp. D4] gi|229436752|gb|EEO46829.1| predicted protein [Bacteroides dorei 5_1_36/D4] Length = 722 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I+I +FR + E EF+D LT++ G NG GK++ EA+EWLF ++R Sbjct: 1 MRIKSIDIKNFRSYYGENNHFEFSDGLTLILGDNGDGKTTFFEALEWLFDTTSER 55 >gi|126732367|ref|ZP_01748167.1| SMC protein [Sagittula stellata E-37] gi|126707236|gb|EBA06302.1| SMC protein [Sagittula stellata E-37] Length = 1151 Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ F+ F + + + LT V G NG GKS+L EA+ W+ + G Sbjct: 1 MHFSRLRLTGFKSFVDSTDLIISSGLTGVVGPNGCGKSNLLEALRWVMGETRAKAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|67924337|ref|ZP_00517770.1| GTP-binding [Crocosphaera watsonii WH 8501] gi|67853823|gb|EAM49149.1| GTP-binding [Crocosphaera watsonii WH 8501] Length = 1221 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|172038210|ref|YP_001804711.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142] gi|171699664|gb|ACB52645.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142] Length = 1221 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F I F T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|159902606|ref|YP_001549950.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9211] gi|159887782|gb|ABX07996.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9211] Length = 1207 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L+ + +E+++F+ F I + T+V G NG GKS++ + I + T R Sbjct: 8 LLVYINQVELTNFKSFGGSMTIPLEEGFTVVTGPNGSGKSNILDGILFCLGLATSRGMRA 67 Query: 85 DSIKKR 90 D + Sbjct: 68 DRLPDL 73 >gi|167044939|gb|ABZ09605.1| putative RecF/RecN/SMC N terminal domain protein [uncultured marine microorganism HF4000_APKG8D23] Length = 1302 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 31/61 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ +F+ F I + T + G NG GKS+ +AI+++ + + + Sbjct: 1 MRLLRMELENFKSFAGEVTIPLEEGFTAITGPNGSGKSNSLDAIQFVLGPKSTKSIRAAN 60 Query: 87 I 87 + Sbjct: 61 V 61 >gi|126463296|ref|YP_001044410.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17029] gi|126104960|gb|ABN77638.1| chromosome segregation protein SMC [Rhodobacter sphaeroides ATCC 17029] Length = 1170 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G Sbjct: 20 LRFTRLRLNGFKSFVDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAG 79 Query: 87 IKK 89 ++ Sbjct: 80 MED 82 >gi|89067327|ref|ZP_01154840.1| Chromosome segregation protein [Oceanicola granulosus HTCC2516] gi|89046896|gb|EAR52950.1| Chromosome segregation protein [Oceanicola granulosus HTCC2516] Length = 1151 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFTRLRLNGFKSFVDPTDLVISQGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|160902796|ref|YP_001568377.1| SMC domain-containing protein [Petrotoga mobilis SJ95] gi|160360440|gb|ABX32054.1| SMC domain protein [Petrotoga mobilis SJ95] Length = 1174 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KLL +EI F+ F ++ + G NG GKS++ +AI WL +Q++ Sbjct: 1 MKLLSLEIEGFKSFGRRTYFNLDKNIIAIIGPNGSGKSNIVDAIRWLLGEQSQKQMR 57 >gi|254420613|ref|ZP_05034337.1| chromosome segregation protein SMC [Brevundimonas sp. BAL3] gi|196186790|gb|EDX81766.1| chromosome segregation protein SMC [Brevundimonas sp. BAL3] Length = 1145 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F + ++ LT V G NG GKS++ E++ W+ + + G Sbjct: 1 MQFQRLRLVGFKSFVDPAEVHIESGLTGVVGPNGCGKSNVLESLRWVMGANSAKAMRGQG 60 Query: 87 IKK 89 + Sbjct: 61 MDD 63 >gi|119385462|ref|YP_916518.1| chromosome segregation protein SMC [Paracoccus denitrificans PD1222] gi|119375229|gb|ABL70822.1| chromosome segregation protein SMC [Paracoccus denitrificans PD1222] Length = 1167 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + + LT V G NG GKS+L EA+ W+ G+ Sbjct: 21 LRFDRLRLNGFKSFVDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGEG 80 Query: 87 IKK 89 ++ Sbjct: 81 MED 83 >gi|119512656|ref|ZP_01631730.1| chromosome segregation protein [Nodularia spumigena CCY9414] gi|119462671|gb|EAW43634.1| chromosome segregation protein [Nodularia spumigena CCY9414] Length = 1206 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+++G NG GKS++ +A+ + + + D Sbjct: 1 MVHVKRVELTNFKSFGGTTSVPLLPGFTVISGPNGSGKSNILDALLFCLGLSSSKGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|310815120|ref|YP_003963084.1| chromosome segregation protein SMC [Ketogulonicigenium vulgare Y25] gi|308753855|gb|ADO41784.1| chromosome segregation protein SMC [Ketogulonicigenium vulgare Y25] Length = 729 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + ++ LT V G NG GKS+L EA+ W+ G Sbjct: 1 MQFTRLRLNGFKSFVDQTELVIQPGLTGVVGPNGCGKSNLLEALRWVMGETRPSAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|186685788|ref|YP_001868984.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102] gi|186468240|gb|ACC84041.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102] Length = 1223 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 32/70 (45%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+++G NG GKS++ +A+ + + + D Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLPGCTVISGPNGSGKSNILDALLFCLGLSSSKGMRAD 60 Query: 86 SIKKRSIKTP 95 + T Sbjct: 61 RLPDLVNNTQ 70 >gi|83951616|ref|ZP_00960348.1| SMC protein [Roseovarius nubinhibens ISM] gi|83836622|gb|EAP75919.1| SMC protein [Roseovarius nubinhibens ISM] Length = 1151 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ F+ F + + D LT V G NG GKS+L EA+ W+ G Sbjct: 1 MHFSKLRLTGFKSFVDPTDLIINDGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|320450440|ref|YP_004202536.1| chromosome segregation SMC protein [Thermus scotoductus SA-01] gi|320150609|gb|ADW21987.1| chromosome segregation SMC protein [Thermus scotoductus SA-01] Length = 1010 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + + F+ F E ++F D +T + G NG GKS+L EA+ ++ G G + Sbjct: 6 RIDRLVLQGFKSFAERTALDFPDPITGIIGPNGSGKSNLVEALRFV-TGARAHELRGQEL 64 >gi|149915537|ref|ZP_01904063.1| chromosome segregation protein, putative [Roseobacter sp. AzwK-3b] gi|149810429|gb|EDM70272.1| chromosome segregation protein, putative [Roseobacter sp. AzwK-3b] Length = 1151 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MQFTKLRLTGFKSFVDPTDLHIKHGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|217077222|ref|YP_002334940.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] gi|217037077|gb|ACJ75599.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] Length = 1155 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 KL +I I+ F+ F KI + +T + G NG GKS++ EAI+W+F ++ ++ Sbjct: 3 IKLKEIYINGFKSFGRPVKIPISPRITAIVGPNGSGKSNIVEAIQWVFGEHSLKQLRASE 62 Query: 85 --DSIKKRSIKTP 95 D I K + KTP Sbjct: 63 KFDMIFKGNGKTP 75 >gi|282897603|ref|ZP_06305603.1| Chromosome segregation protein SMC [Raphidiopsis brookii D9] gi|281197526|gb|EFA72422.1| Chromosome segregation protein SMC [Raphidiopsis brookii D9] Length = 1194 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+++G NG GKS++ +A+ + + + D Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLPGCTVISGPNGSGKSNILDALLFCLGLSSSKGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 KLPDL 65 >gi|282899440|ref|ZP_06307407.1| Chromosome segregation protein SMC [Cylindrospermopsis raciborskii CS-505] gi|281195704|gb|EFA70634.1| Chromosome segregation protein SMC [Cylindrospermopsis raciborskii CS-505] Length = 1193 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+++G NG GKS++ +A+ + + + D Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLPGCTVISGPNGSGKSNILDALLFCLGLSSSKGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 KLPDL 65 >gi|260574957|ref|ZP_05842959.1| chromosome segregation protein SMC [Rhodobacter sp. SW2] gi|259022962|gb|EEW26256.1| chromosome segregation protein SMC [Rhodobacter sp. SW2] Length = 1151 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ F+ F + + LT V G NG GKS+L EA+ W+ G Sbjct: 1 MRFARLRLNGFKSFVDPTDLVIHPGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG 60 Query: 87 IKK 89 ++ Sbjct: 61 MED 63 >gi|150020781|ref|YP_001306135.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] gi|149793302|gb|ABR30750.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] Length = 1153 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L I + F+ F + KI + ++T + G NG GKS++ EAI+W+ ++ + Sbjct: 5 LKGIFLKGFKSFGKPTKIPISPNITAIVGPNGSGKSNIVEAIQWVLGEHSLKNLRAS 61 >gi|294496457|ref|YP_003542950.1| condensin subunit Smc [Methanohalophilus mahii DSM 5219] gi|292667456|gb|ADE37305.1| condensin subunit Smc [Methanohalophilus mahii DSM 5219] Length = 1173 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 31/73 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +F+ F + KI F D T ++G NG GKS++ + I ++ + R + Sbjct: 1 MYIKKIEFMNFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGILFVLGLSSSRTLRAEK 60 Query: 87 IKKRSIKTPMPMC 99 + Sbjct: 61 LTDLIYNGEKSKN 73 >gi|75910885|ref|YP_325181.1| condensin subunit Smc [Anabaena variabilis ATCC 29413] gi|75704610|gb|ABA24286.1| condensin subunit Smc [Anabaena variabilis ATCC 29413] Length = 1208 Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+V+G NG GKS++ +A+ + + + D Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLSGFTVVSGPNGSGKSNILDALLFCLGLASSKGMRAD 60 Query: 86 SIKKRSIKTP 95 + T Sbjct: 61 RLPDLVNNTQ 70 >gi|17228623|ref|NP_485171.1| chromosome segregation protein [Nostoc sp. PCC 7120] gi|17130474|dbj|BAB73085.1| chromosome segregation protein [Nostoc sp. PCC 7120] Length = 1208 Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+V+G NG GKS++ +A+ + + + D Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLSGFTVVSGPNGSGKSNILDALLFCLGLASSKGMRAD 60 Query: 86 SIKKRSIKTP 95 + T Sbjct: 61 RLPDLVNNTQ 70 >gi|18978215|ref|NP_579572.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638] gi|18894028|gb|AAL81967.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638] Length = 1291 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 13 LSKSLTSYYARKLIF-KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAI 70 L SL +Y R I + +E+ F+ + + I F+ T + G NG GKS++ +AI Sbjct: 101 LYTSLLAYQYRCTIMPYIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAI 160 Query: 71 EWLFYGYTQRRKHG---DSIKKRSIKTPMPMCMA 101 ++ G + + + K P A Sbjct: 161 LFVLGGLSAKAMRASRISDLIFAGSKNEPPAKYA 194 >gi|254416888|ref|ZP_05030636.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC 7420] gi|196176252|gb|EDX71268.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC 7420] Length = 1274 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F +I T+V+G NG GKS++ +A+ + + + + Sbjct: 1 MVHVKRLELTNFKSFGGTTQIPMLPGFTVVSGPNGSGKSNILDALLFCLGLSSSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|147919561|ref|YP_686699.1| chromosome segregation/partition protein [uncultured methanogenic archaeon RC-I] gi|110622095|emb|CAJ37373.1| chromosome segregation/partition protein [uncultured methanogenic archaeon RC-I] Length = 1173 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE+S+F+ F K+ F D T ++G NG GKS++ ++I + R + Sbjct: 1 MHIKEIELSNFKSFARKVKVPFYDDFTTISGPNGSGKSNIIDSILFCLGLSNSRTMRAEK 60 Query: 87 IKKR--SIKTPMP 97 + S+ P Sbjct: 61 LTDLIYSVDGKSP 73 >gi|300865817|ref|ZP_07110567.1| condensin subunit Smc [Oscillatoria sp. PCC 6506] gi|300336183|emb|CBN55722.1| condensin subunit Smc [Oscillatoria sp. PCC 6506] Length = 1284 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + +E+++F+ F I T+V+G NG GKS++ +A+ + T + Sbjct: 27 IMVHIKRVELTNFKSFGGTTAIPLLPGFTVVSGPNGSGKSNILDALLFCLGLSTSKGMRA 86 Query: 85 DSIKKR 90 + + Sbjct: 87 ERLPDL 92 >gi|282163298|ref|YP_003355683.1| chromosome segregation protein SMC [Methanocella paludicola SANAE] gi|282155612|dbj|BAI60700.1| chromosome segregation protein SMC [Methanocella paludicola SANAE] Length = 1173 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE+++F+ F KI F D T ++G NG GKS++ ++I + R + Sbjct: 1 MHIKEIELNNFKSFGRKAKIPFFDDFTTISGPNGSGKSNVIDSILFCLGLSNSRSMRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|289523384|ref|ZP_06440238.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503076|gb|EFD24240.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 1140 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + F+ F E IE ++ T++ G NG GKS++ +A+ W + R Sbjct: 7 IERVALKGFKSFGEQVDIELSEKYTVIAGPNGSGKSNILDAVRWALGEQSPSRLR 61 >gi|237747721|ref|ZP_04578201.1| chromosome segregation protein [Oxalobacter formigenes OXCC13] gi|229379083|gb|EEO29174.1| chromosome segregation protein [Oxalobacter formigenes OXCC13] Length = 1169 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +S F+ F + I L V G NG GKS++ +A+ W+ G+S+ Sbjct: 1 MSGFKSFVDPTTIRVNGKLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGESMHD 56 >gi|48477928|ref|YP_023634.1| chromosome partition protein smc [Picrophilus torridus DSM 9790] gi|48430576|gb|AAT43441.1| chromosome partition protein smc [Picrophilus torridus DSM 9790] Length = 1150 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IEI +F+ + + KI F T++ G NG GKS++ +AI ++ + + + Sbjct: 1 MFIESIEIDNFKSYGKKTKIYFKPGFTVIIGPNGSGKSNIGDAILFVLGIRSNKTVRIER 60 Query: 87 IKKRSIKTPM 96 + K+ Sbjct: 61 LSDLIHKSEK 70 >gi|124485832|ref|YP_001030448.1| condensin subunit Smc [Methanocorpusculum labreanum Z] gi|124363373|gb|ABN07181.1| condensin subunit Smc [Methanocorpusculum labreanum Z] Length = 1149 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++I +F+ F+ KI F + T+++G NG GKS++ ++I ++ T R + Sbjct: 1 MHIVQVDIDNFKSFSRKTKIPFYEGFTVISGPNGSGKSNIIDSILFVLSLSTSRTLRAEK 60 Query: 87 IKK 89 + Sbjct: 61 LTD 63 >gi|13357697|ref|NP_077971.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762065|ref|YP_001752223.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920182|ref|ZP_02931569.1| p115 protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508750|ref|ZP_02958224.1| p115 protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186702010|ref|ZP_02971627.1| p115 protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356999|pir||C82930 p115 protein UU140 [imported] - Ureaplasma urealyticum gi|6899099|gb|AAF30546.1|AE002114_13 p115 protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827642|gb|ACA32904.1| p115 protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902559|gb|EDT48848.1| p115 protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675683|gb|EDT87588.1| p115 protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700790|gb|EDU19072.1| p115 protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 981 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E IEF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAHGFKSFGEPVVIEFKHPMTGIIGANGTGKSNIIDALKWVIGDQSLKSMR 58 >gi|113475243|ref|YP_721304.1| condensin subunit Smc [Trichodesmium erythraeum IMS101] gi|110166291|gb|ABG50831.1| condensin subunit Smc [Trichodesmium erythraeum IMS101] Length = 1219 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+V+G NG GKS++ +A+ + T + + Sbjct: 1 MVHIKCLELTNFKSFGGTTTIPLLPGFTVVSGPNGSGKSNILDALLFCLGLSTSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|332710639|ref|ZP_08430584.1| condensin subunit Smc [Lyngbya majuscula 3L] gi|332350694|gb|EGJ30289.1| condensin subunit Smc [Lyngbya majuscula 3L] Length = 1315 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+S F+ F KI + T+++G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELSRFKSFGGTTKIPLLEGFTVISGPNGSGKSNILDALLFCLGIASSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|269986901|gb|EEZ93177.1| SMC domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 382 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +E+ +F+ F K +F + + G NG GKS+L +A+ ++F G +++ D + Sbjct: 3 YIKQVELDNFKSFAGHIKFDFVNGFNAIAGANGSGKSNLIDALLFVFGGSSKKEMRSDIL 62 Query: 88 KKR 90 Sbjct: 63 TDL 65 >gi|257793002|ref|YP_003186401.1| SMC domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479694|gb|ACV60012.1| SMC domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 514 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHG 84 K+L I++ +FR FTE +F D +T+++G NG GKS+L+EA+ W +G R+K Sbjct: 1 MKILSIQLENFRSFTE-ASFQFHD-ITVISGHNGAGKSTLAEAVVWCLFGTDIAGRQKQD 58 Query: 85 DSIKKRSIK 93 + + + K Sbjct: 59 EKLMRLGEK 67 >gi|218289469|ref|ZP_03493697.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218240337|gb|EED07519.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 514 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHG 84 K+L I++ +FR FTE +F D +T+++G NG GKS+L+EA+ W +G R+K Sbjct: 1 MKILSIQLENFRSFTE-ASFQFHD-ITVISGHNGAGKSTLAEAVVWCLFGTDIAGRQKQD 58 Query: 85 DSIKKRSIK 93 + + + K Sbjct: 59 EKLMRLGEK 67 >gi|254468473|ref|ZP_05081879.1| chromosome segregation protein SMC [beta proteobacterium KB13] gi|207087283|gb|EDZ64566.1| chromosome segregation protein SMC [beta proteobacterium KB13] Length = 1161 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ F+ F + I L + G NG GKS++ E+++W+ + + G+S++ Sbjct: 1 MAGFKTFVDPTTISLPGQLVGIVGPNGCGKSNIMESVKWVLGSSSAKELRGESME 55 >gi|81300854|ref|YP_401062.1| condensin subunit Smc [Synechococcus elongatus PCC 7942] gi|81169735|gb|ABB58075.1| condensin subunit Smc [Synechococcus elongatus PCC 7942] Length = 1195 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F + T+V G NG GKS++ +A+ + + + D Sbjct: 1 MVYIKQIELSHFKSFGGTTSLPLLPEFTVVTGPNGSGKSNILDALLFALGLSSSKGMRAD 60 Query: 86 SIKKRSIKT 94 + T Sbjct: 61 RLPDLVNST 69 >gi|209526267|ref|ZP_03274797.1| chromosome segregation protein SMC [Arthrospira maxima CS-328] gi|209493364|gb|EDZ93689.1| chromosome segregation protein SMC [Arthrospira maxima CS-328] Length = 1199 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+V+G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELTNFKSFGGTTSIPLLPGFTVVSGPNGSGKSNILDALLFALGLSSSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|328950730|ref|YP_004368065.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451054|gb|AEB11955.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] Length = 1081 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHG 84 ++ + + F+ F E +EF L+ + G NG GKS++ EA+ ++ + R Sbjct: 1 MRIERLILHGFKSFAERTVLEFPHGLSGIIGPNGSGKSNVIEALRFVVGARARELRGGRA 60 Query: 85 DSIKKRSIKTPMPMCMA 101 + + PM A Sbjct: 61 EELIFHGGTGRPPMPFA 77 >gi|291567860|dbj|BAI90132.1| chromosome segregation protein SMC [Arthrospira platensis NIES-39] Length = 1202 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+V+G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELTNFKSFGGTTSIPLLPGFTVVSGPNGSGKSNILDALLFALGLSSSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|284053302|ref|ZP_06383512.1| condensin subunit Smc [Arthrospira platensis str. Paraca] Length = 1118 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+V+G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELTNFKSFGGTTSIPLLPGFTVVSGPNGSGKSNILDALLFALGLSSSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|58177330|pdb|1XEW|X Chain X, Structural Biochemistry Of Atp-Driven Dimerization And Dna Stimulated Activation Of Smc Atpases. gi|58177332|pdb|1XEX|A Chain A, Structural Biochemistry Of Atp-Driven Dimerization And Dna Stimulated Activation Of Smc Atpases Length = 182 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 63 ISDLIFAGSKNEPPAKYA 80 >gi|241758639|ref|ZP_04756753.1| chromosome segregation protein [Neisseria flavescens SK114] gi|241321150|gb|EER57346.1| chromosome segregation protein [Neisseria flavescens SK114] Length = 115 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK---KRSIKT 94 + FT+ I L V G NG GKS++ +A+ W+ + ++ G+S++ T Sbjct: 1 KSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESMQDVIFNGAAT 60 Query: 95 PMPMCMAVPRCKYQL 109 P PR +L Sbjct: 61 RRP----APRASVEL 71 >gi|16580622|emb|CAD10418.1| SMC protein [Deinococcus radiodurans] Length = 1100 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK- 82 + I + F+ F + ++EF+ + V G NG GKS++ EAI W +G R Sbjct: 2 IHAITLQGFKSFADRTRLEFSLSSGSGGVCAVIGPNGSGKSNVVEAIRWATHGARARDLR 61 Query: 83 --HGDSIKKRSIKTPMPMCMA 101 G + P+ +A Sbjct: 62 AGRGSELIFHGSGGKAPLGLA 82 >gi|294101613|ref|YP_003553471.1| SMC domain protein [Aminobacterium colombiense DSM 12261] gi|293616593|gb|ADE56747.1| SMC domain protein [Aminobacterium colombiense DSM 12261] Length = 1139 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 25/57 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + F+ F ++ F+ T + G NG GKS++ + + W+ + Sbjct: 1 MFIERLRLKGFKSFGGSHELTFSPGFTAIVGPNGSGKSNILDGLRWVLGEGSPNCLR 57 >gi|262282929|ref|ZP_06060696.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] gi|262261181|gb|EEY79880.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA] Length = 879 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 32/56 (57%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ +L + I +FR F + +F+ +TI G NG GKSS+ +AI+W G R Sbjct: 1 MMIRLKQVIIKNFRNFQGTHQFDFSKDVTIFLGDNGNGKSSVFDAIQWCLTGNVDR 56 >gi|269860042|ref|XP_002649744.1| chromosome segregation protein cut3 [Enterocytozoon bieneusi H348] gi|220066803|gb|EED44274.1| chromosome segregation protein cut3 [Enterocytozoon bieneusi H348] Length = 1082 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL +I + +F+ + KI F D T + G NG GKS+L +AI + GY+ ++ Sbjct: 1 MLKLKEIYLYNFKSYKGKHKIGPFCDKFTAIVGPNGCGKSNLLDAILFGL-GYSAKKLRH 59 Query: 85 DSIKKRSIKTPMPM 98 ++K K M Sbjct: 60 TNLKDTIYKGESEM 73 >gi|299856726|pdb|3KTA|A Chain A, Structural Basis For Adenylate Kinase Activity In Abc Atpases gi|299856728|pdb|3KTA|C Chain C, Structural Basis For Adenylate Kinase Activity In Abc Atpases Length = 182 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAXRASR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 63 ISDLIFAGSKNEPPAKYA 80 >gi|284164623|ref|YP_003402902.1| chromosome segregation protein SMC [Haloterrigena turkmenica DSM 5511] gi|284014278|gb|ADB60229.1| chromosome segregation protein SMC [Haloterrigena turkmenica DSM 5511] Length = 1196 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +F+ F KI F + T++ G NG GKS++ +A+ + R + Sbjct: 1 MYIKALVLDNFKSFGRKTKIPFYEDFTVITGPNGSGKSNIIDAVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|288574647|ref|ZP_06393004.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570388|gb|EFC91945.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 1135 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---H 83 + +++ +F+ F ++ ++ T + G NG GKS++ + + W R Sbjct: 1 MYIARLQLKNFKSFGGSHELPLSEGFTAIVGPNGSGKSNILDGLRWGLGDSNGGRLRITR 60 Query: 84 GDSIKKRSIKTPMP 97 + + T P Sbjct: 61 QSDLLFQGTTTRQP 74 >gi|85706675|ref|ZP_01037767.1| SMC protein [Roseovarius sp. 217] gi|85668733|gb|EAQ23602.1| SMC protein [Roseovarius sp. 217] Length = 1144 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F+ F + + A LT V G NG GKS+L EA+ W+ GD ++ Sbjct: 1 MTGFKSFVDPTDLIIAGGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGDGMED 56 >gi|91773464|ref|YP_566156.1| condensin subunit Smc [Methanococcoides burtonii DSM 6242] gi|91712479|gb|ABE52406.1| condensin subunit SMC [Methanococcoides burtonii DSM 6242] Length = 1174 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE +F+ F + KI F D T ++G NG GKS++ + I ++ R + Sbjct: 1 MYIKEIEFINFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGILFVLGLSNSRTLRAEK 60 Query: 87 IKKR---SIKTPMP 97 + K P Sbjct: 61 LTDLIYNGDKAKRP 74 >gi|254432485|ref|ZP_05046188.1| chromosome segregation protein SMC [Cyanobium sp. PCC 7001] gi|197626938|gb|EDY39497.1| chromosome segregation protein SMC [Cyanobium sp. PCC 7001] Length = 1203 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E++HF+ F I T+V G NG GKS++ +A+ + + R + Sbjct: 1 MVFINQVELTHFKSFGGSMTIPLEQGFTVVTGPNGSGKSNILDAVLFCLGLASSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|119489523|ref|ZP_01622284.1| Chromosome segregation protein SMC [Lyngbya sp. PCC 8106] gi|119454602|gb|EAW35749.1| Chromosome segregation protein SMC [Lyngbya sp. PCC 8106] Length = 1217 Score = 67.7 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+V+G NG GKS++ +A+ + + + + Sbjct: 1 MVHIKRVELTNFKSFGGTTDIPLLPGFTVVSGPNGSGKSNILDALLFALGLSSSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|284161167|ref|YP_003399790.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] gi|284011164|gb|ADB57117.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] Length = 1135 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I++ +F+ F + +IEF D+ T++ G NG GKS++ ++I + F + + D Sbjct: 1 MFIRKIKLRNFKSF-KKAEIEFRDNFTVITGPNGSGKSNIIDSILFCFGISSSKTLRADK 59 Query: 87 IKKR 90 + Sbjct: 60 LTDL 63 >gi|330685689|gb|EGG97330.1| chromosome segregation protein SMC [Staphylococcus epidermidis VCU121] Length = 1169 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI---KKRSIKTPMPMCMAV 102 ++F +T + G NG GKS++++AI+W+ + + G + + P A Sbjct: 1 MQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRKPQNFAE 60 Query: 103 PRCK 106 + K Sbjct: 61 VKLK 64 >gi|73668137|ref|YP_304152.1| condensin subunit Smc [Methanosarcina barkeri str. Fusaro] gi|72395299|gb|AAZ69572.1| condensin subunit Smc [Methanosarcina barkeri str. Fusaro] Length = 1175 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE +F+ F + KI F + T ++G NG GKS++ + I + + R + Sbjct: 1 MYIKEIEFVNFKSFGKKVKIPFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|20093122|ref|NP_619197.1| chromosome segregation protein [Methanosarcina acetivorans C2A] gi|19918459|gb|AAM07677.1| chromosome segregation protein [Methanosarcina acetivorans C2A] Length = 1175 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE +F+ F + KI F + T ++G NG GKS++ + I + + R + Sbjct: 1 MYIKEIEFVNFKSFGKKVKISFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|195867740|ref|ZP_03079741.1| p115 protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660595|gb|EDX53851.1| p115 protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 981 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSIR 58 >gi|188524094|ref|ZP_03004177.1| p115 protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273458|ref|ZP_03205994.1| p115 protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554096|ref|YP_002284563.1| p115 protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|195659955|gb|EDX53335.1| p115 protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249978|gb|EDY74758.1| p115 protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541597|gb|ACI59826.1| p115 protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 981 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSMR 58 >gi|185178803|ref|ZP_02964597.1| p115 protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024147|ref|ZP_02996877.1| p115 protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518544|ref|ZP_03004008.1| p115 protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|184209428|gb|EDU06471.1| p115 protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018774|gb|EDU56814.1| p115 protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997904|gb|EDU67001.1| p115 protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 981 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSMR 58 >gi|171920660|ref|ZP_02931893.1| p115 protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903393|gb|EDT49682.1| p115 protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 981 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSMR 58 >gi|322375789|ref|ZP_08050300.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] gi|321279057|gb|EFX56099.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C300] Length = 899 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ F I+F+D +T + G NGYGK+++ +AIE G R Sbjct: 1 MKIRKILLYNFKNFRNETVIDFSDGITFLVGPNGYGKTTIFDAIELGLTGNLSR 54 >gi|21227133|ref|NP_633055.1| chromosome partition protein [Methanosarcina mazei Go1] gi|20905464|gb|AAM30727.1| Chromosome partition protein [Methanosarcina mazei Go1] Length = 1175 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE +F+ F + +I F + T ++G NG GKS++ + I + + R + Sbjct: 1 MYIKEIEFVNFKSFGKKVRISFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|148642753|ref|YP_001273266.1| DNA repair ATPase SbcC [Methanobrevibacter smithii ATCC 35061] gi|148551770|gb|ABQ86898.1| ATPase involved in DNA repair, SbcC [Methanobrevibacter smithii ATCC 35061] Length = 658 Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L IEI++FR F QKI+F ++LTI+ NG GK+SL A+ W YG Sbjct: 1 MYLDSIEITNFRPFYGTQKIDFGFNDLENLTIILADNGSGKTSLVNALTWCLYGEELHDV 60 Query: 83 HGDSIKKRSIKTPMPM 98 S +++ + Sbjct: 61 RNKSEPLYNLRAAKEL 76 >gi|220905777|ref|YP_002481088.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7425] gi|219862388|gb|ACL42727.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7425] Length = 1198 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F I T+++G NG GKS+L +A+ + + + Sbjct: 1 MVYIKQLELTNFKSFGSTTAIPLLPGFTVISGPNGSGKSNLLDALLFALGLAGSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|225550432|ref|ZP_03771381.1| p115 protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379586|gb|EEH01948.1| p115 protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 816 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSMR 58 >gi|225551566|ref|ZP_03772512.1| p115 protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379381|gb|EEH01746.1| p115 protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 840 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L IE F+ F E EF +T + G NG GKS++ +A++W+ + + Sbjct: 1 MIFLKKIEAQGFKSFGEPIVAEFKHPMTGIVGANGTGKSNIVDALKWVIGDQSLKSMR 58 >gi|22299468|ref|NP_682715.1| chromosome segregation SMC protein [Thermosynechococcus elongatus BP-1] gi|22295651|dbj|BAC09477.1| chromosome segregation SMC protein [Thermosynechococcus elongatus BP-1] Length = 1168 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+++F+ F I T+++G NG GKS+L +A+ + + + Sbjct: 1 MYIKRLELTNFKSFGGTTVIPLLPGFTVISGPNGSGKSNLLDALLFALGLAGSKGMRAER 60 Query: 87 IKKR 90 + Sbjct: 61 LPDL 64 >gi|288931890|ref|YP_003435950.1| chromosome segregation protein SMC [Ferroglobus placidus DSM 10642] gi|288894138|gb|ADC65675.1| chromosome segregation protein SMC [Ferroglobus placidus DSM 10642] Length = 1166 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGD 85 + IE+ +F+ F+ +I F +++G NG GKS++ +AI + + + + Sbjct: 1 MHIEKIELKNFKSFSRKTEIPFVKGFNVISGPNGSGKSNIIDAILFCLGLSSSTKVLRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 KLTDL 65 >gi|28375557|emb|CAD66602.1| SMC protein [Pyrococcus furiosus] Length = 1177 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 63 ISDLIFAGSKNEPPAKYA 80 >gi|13541638|ref|NP_111326.1| chromosome segregation ATPase [Thermoplasma volcanium GSS1] gi|14325037|dbj|BAB59963.1| chromosome scaffold protein [smc1] [Thermoplasma volcanium GSS1] Length = 1141 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 34/75 (45%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE +F+ F + + I F+ L +++G NG GKS++ + + ++ + D + Sbjct: 4 YIERIEAYNFKSFRKKKTIYFSRGLNVISGPNGSGKSNIGDMLLFVLGTKSIHSVRADKL 63 Query: 88 KKRSIKTPMPMCMAV 102 K C + Sbjct: 64 SDLISKDSGNTCYVI 78 >gi|332158041|ref|YP_004423320.1| chromosome segregation protein smc1 [Pyrococcus sp. NA2] gi|331033504|gb|AEC51316.1| chromosome segregation protein smc1 [Pyrococcus sp. NA2] Length = 1178 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLELKGFKSYGNRKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K+ P A Sbjct: 63 ISDLIFAGSKSEGPAKYA 80 >gi|315925614|ref|ZP_07921824.1| recombination protein F [Pseudoramibacter alactolyticus ATCC 23263] gi|315621155|gb|EFV01126.1| recombination protein F [Pseudoramibacter alactolyticus ATCC 23263] Length = 372 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + D+++ HFR + Q +F+DH+ ++ G N GK++L EA+ +L GY+ R Sbjct: 3 ITDLQLKHFRNYASEQ-FDFSDHINVITGANAQGKTNLLEALFFLARGYSHR 53 >gi|14520575|ref|NP_126050.1| chromosome segregation protein smc1 [Pyrococcus abyssi GE5] gi|5457791|emb|CAB49281.1| smc1 chromosome segregation protein [Pyrococcus abyssi GE5] Length = 1177 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLELKGFKSYGNRKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K+ P A Sbjct: 63 ISDLIFAGSKSEPPAKYA 80 >gi|11499153|ref|NP_070387.1| chromosome segregation protein (smc1) [Archaeoglobus fulgidus DSM 4304] gi|2649004|gb|AAB89690.1| chromosome segregation protein (smc1) [Archaeoglobus fulgidus DSM 4304] Length = 1156 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGD 85 + I + +F+ F + +I F T++ G NG GKS++ ++I + + ++ + Sbjct: 1 MHIEKIRLKNFKSFGKKAEIPFFKGFTVITGPNGSGKSNIIDSILFCLGLSTSTKQLRAE 60 Query: 86 SIKKRSIKTPMPMCMAV 102 + +A+ Sbjct: 61 RLTDLVHNGRSEAEVAI 77 >gi|317967964|ref|ZP_07969354.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus sp. CB0205] Length = 1201 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E++HF+ F I + T+V G NG GKS++ + + + + R + Sbjct: 1 MVHINQVELTHFKSFGGSMSIPLDEGFTVVTGPNGSGKSNILDGVLFCLGLASSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|209881009|ref|XP_002141943.1| structural maintenance of chromosomes protein [Cryptosporidium muris RN66] gi|209557549|gb|EEA07594.1| structural maintenance of chromosomes protein, putative [Cryptosporidium muris RN66] Length = 1378 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 6 KKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKS 64 + ++C + + ++ + + +E+ +F+ + KI F+ T + G NG GKS Sbjct: 7 RNSSCDLEKADVINRKCQRTSYYIKMMELENFKSYKGKHKIGPFSKRFTCIVGPNGSGKS 66 Query: 65 SLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 +L +A+ ++ G + + G +IK + Sbjct: 67 NLMDALSFVL-GVSSGQIRGTNIKDFIFRQE 96 >gi|327401278|ref|YP_004342117.1| chromosome segregation protein SMC [Archaeoglobus veneficus SNP6] gi|327316786|gb|AEA47402.1| chromosome segregation protein SMC [Archaeoglobus veneficus SNP6] Length = 1170 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGD 85 + I I +F+ F + +I F T+++G NG GKS++ ++I + + + + Sbjct: 1 MHIKKIVIKNFKSFGKKVEIPFYRGFTVISGPNGSGKSNIVDSILFCLGLSTSTKALRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLTDL 65 >gi|170077736|ref|YP_001734374.1| chromosome segregation protein SMC [Synechococcus sp. PCC 7002] gi|28375561|emb|CAD66604.1| SMC protein [Synechococcus sp. PCC 7002] gi|169885405|gb|ACA99118.1| chromosome segregation protein SMC [Synechococcus sp. PCC 7002] Length = 1209 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + IE+SHF+ F + T+V+G NG GKS++ + I + + + + Sbjct: 1 MVHIKQIELSHFKSFGGTVAVPLRPGFTVVSGPNGSGKSNILDGILFCLGLASSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|312126265|ref|YP_003991139.1| DNA replication and repair protein recf [Caldicellulosiruptor hydrothermalis 108] gi|311776284|gb|ADQ05770.1| DNA replication and repair protein RecF [Caldicellulosiruptor hydrothermalis 108] Length = 353 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I I +FRG+ + EF D + ++ G N GK+SL EA+ + G + + + D+ Sbjct: 1 MKIKNIYIENFRGYKQRF-FEFKDKMNLIVGNNASGKTSLLEALYFCICGKSFKSRDVDA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I S + M V +Y + Sbjct: 60 INFDSYYFKLEMSAEVGNIEYNV 82 >gi|15789609|ref|NP_279433.1| chromosome segregation protein [Halobacterium sp. NRC-1] gi|169235321|ref|YP_001688521.1| chromosome segregation protein [Halobacterium salinarum R1] gi|10579965|gb|AAG18913.1| chromosome segregation [Halobacterium sp. NRC-1] gi|167726387|emb|CAP13170.1| chromosome segregation protein [Halobacterium salinarum R1] Length = 1190 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 30/64 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +F+ F +I F + T ++G NG GKS++ +AI + ++ Sbjct: 1 MYIEELVVENFKSFAGTTRIPFYEDFTTISGPNGSGKSNIIDAILFALGLARTTGMRAET 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|158335947|ref|YP_001517121.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] gi|158306188|gb|ABW27805.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] Length = 1220 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+SHF+ F I T+V+G NG GKS+L +A+ + R + Sbjct: 1 MYVKQLELSHFKSFGSTTAIPLLPGFTVVSGPNGSGKSNLLDALLFALGLAGSRGMRAER 60 Query: 87 IKKR 90 + Sbjct: 61 LPDL 64 >gi|313680022|ref|YP_004057761.1| smc domain protein [Oceanithermus profundus DSM 14977] gi|313152737|gb|ADR36588.1| SMC domain protein [Oceanithermus profundus DSM 14977] Length = 1080 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ + + F+ F + ++ F ++ V G NG GKS++ EAI ++ Sbjct: 1 MKIERLTLHGFKSFADRVELHFDRGISGVIGPNGSGKSNVVEAIRFVMG 49 >gi|116071378|ref|ZP_01468647.1| Chromosome segregation protein SMC [Synechococcus sp. BL107] gi|116066783|gb|EAU72540.1| Chromosome segregation protein SMC [Synechococcus sp. BL107] Length = 1204 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + + HF+ F I + T+V G NG GKS++ + + + R D Sbjct: 1 MVYINQVGLKHFKSFGGAMTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|78184004|ref|YP_376439.1| chromosome segregation protein SMC [Synechococcus sp. CC9902] gi|78168298|gb|ABB25395.1| condensin subunit Smc [Synechococcus sp. CC9902] Length = 1204 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + + HF+ F I + T+V G NG GKS++ + + + R D Sbjct: 1 MVYINQVGLKHFKSFGGAMTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|78213768|ref|YP_382547.1| condensin subunit Smc [Synechococcus sp. CC9605] gi|78198227|gb|ABB35992.1| chromosome segregation protein SMC [Synechococcus sp. CC9605] Length = 1202 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++HF+ F I + T+V G NG GKS++ + + + T R D Sbjct: 1 MVHINQVGLTHFKSFGGAMTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|258647377|ref|ZP_05734846.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260852738|gb|EEX72607.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 717 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +FR + EF+ LT++ G NG GK++ EA+EWLF T+ + + + Sbjct: 3 LKSMNIKNFRSYYGDNTFEFSQGLTLIIGDNGDGKTTFFEALEWLFDTATENKSATNISE 62 Query: 89 KRSIKTP 95 KR + Sbjct: 63 KRKSEME 69 >gi|312877902|ref|ZP_07737847.1| DNA replication and repair protein RecF [Caldicellulosiruptor lactoaceticus 6A] gi|311795328|gb|EFR11712.1| DNA replication and repair protein RecF [Caldicellulosiruptor lactoaceticus 6A] Length = 353 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +FR + + EF D + ++ G N GK+SL EA+ + G + + + D+ Sbjct: 1 MKIKRIYIENFRSYKQRF-FEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDVDA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I S + M V +Y + Sbjct: 60 INFDSYYFKLEMSAEVGDIEYSI 82 >gi|86607501|ref|YP_476264.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab] gi|86556043|gb|ABD01001.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab] Length = 1180 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE++ F+ F + T+++G NG GKS++ + I + + R + Sbjct: 1 MYIKRIELTRFKSFGSTTSLPLLPGFTVISGPNGSGKSNILDGILFALGLSSSRGMRAER 60 Query: 87 IKKR 90 + Sbjct: 61 LSDL 64 >gi|257077012|ref|ZP_05571373.1| chromosome partition protein smc [Ferroplasma acidarmanus fer1] Length = 1156 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 IE+ +F+ + + Q I+ T++ G NG GKS++ +++ ++ + D ++ Sbjct: 5 SIEMENFKSYGDKQSIKINKGFTVIIGPNGSGKSNIGDSMLFVLGIRANKTVRVDKLEDF 64 Query: 91 SIKTPMP 97 KT P Sbjct: 65 IHKTDPP 71 >gi|298676000|ref|YP_003727750.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] gi|298288988|gb|ADI74954.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] Length = 1174 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE +F+ F + KI F D T ++G NG GKS++ + I + R + Sbjct: 1 MYIKEIEFLNFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGILFALGLSNSRTMRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|290559280|gb|EFD92617.1| chromosome segregation protein SMC [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 56 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 32/54 (59%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + IE+ +F+ F K+ F + + G NG GKS++ +A+ ++F G +++R Sbjct: 3 YIKQIELENFKSFAGRTKLSFINGFNAIAGANGSGKSNVIDALLFVFGGSSKKR 56 >gi|224533039|ref|ZP_03673645.1| p115 protein [Borrelia burgdorferi WI91-23] gi|224512033|gb|EEF82428.1| p115 protein [Borrelia burgdorferi WI91-23] gi|312149174|gb|ADQ29245.1| P115 protein [Borrelia burgdorferi N40] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|312792286|ref|YP_004025209.1| DNA replication and repair protein recf [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179426|gb|ADQ39596.1| DNA replication and repair protein RecF [Caldicellulosiruptor kristjanssonii 177R1B] Length = 353 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +FR + + EF D + ++ G N GK+SL EA+ + G + + + D+ Sbjct: 1 MKIKRIYIENFRSYKQRF-FEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDVDA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I S + M V +Y + Sbjct: 60 INFDSYYFKLEMSAEVGDIEYSI 82 >gi|289582242|ref|YP_003480708.1| chromosome segregation protein SMC [Natrialba magadii ATCC 43099] gi|289531795|gb|ADD06146.1| chromosome segregation protein SMC [Natrialba magadii ATCC 43099] Length = 1189 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F KI F + T+V G NG GKS++ +A+ + R + Sbjct: 1 MYIKAVVLDKFKSFGRKTKIPFYEDFTVVTGPNGSGKSNIIDAVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|223889224|ref|ZP_03623813.1| p115 protein [Borrelia burgdorferi 64b] gi|223885473|gb|EEF56574.1| p115 protein [Borrelia burgdorferi 64b] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|298490140|ref|YP_003720317.1| chromosome segregation protein SMC ['Nostoc azollae' 0708] gi|298232058|gb|ADI63194.1| chromosome segregation protein SMC ['Nostoc azollae' 0708] Length = 1217 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 30/65 (46%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E+++F+ F + T+++G NG GKS++ + + + + + + Sbjct: 1 MVHIKRVELTNFKSFGGTTSVPLLPGCTVISGPNGSGKSNILDGLLFCLGLASSKGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|225552301|ref|ZP_03773241.1| p115 protein [Borrelia sp. SV1] gi|225371299|gb|EEH00729.1| p115 protein [Borrelia sp. SV1] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|224531716|ref|ZP_03672348.1| p115 protein [Borrelia valaisiana VS116] gi|224511181|gb|EEF81587.1| p115 protein [Borrelia valaisiana VS116] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + ++ Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVEN 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|37522891|ref|NP_926268.1| chromosome segregation SMC protein [Gloeobacter violaceus PCC 7421] gi|35213893|dbj|BAC91263.1| glr3322 [Gloeobacter violaceus PCC 7421] Length = 1165 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI F+ F +I + T+V+G NG GKS++ +A+ + T R + Sbjct: 1 MHLKCLEIERFKSFGPYTRIPLLEGFTVVSGPNGSGKSNIIDALLFALGLSTSRGMRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LSDL 64 >gi|66358594|ref|XP_626475.1| SMC1 structural maintenance of chromosomes 1 [Cryptosporidium parvum Iowa II] gi|46227810|gb|EAK88730.1| SMC1 structural maintenance of chromosomes 1 [Cryptosporidium parvum Iowa II] Length = 1349 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R L + + I +F+ + I F++ LT + G NG GKS+L +A+ + G + Sbjct: 25 RTLKCFIKKLIIENFKSYNGRHIIGPFSEGLTCIVGPNGSGKSNLMDALSFAL-GLSSND 83 Query: 82 KHGDSIKKRSIKTPMP 97 ++K + Sbjct: 84 MRSTNLKDLIYRPEQE 99 >gi|195941784|ref|ZP_03087166.1| P115 protein [Borrelia burgdorferi 80a] gi|216264295|ref|ZP_03436287.1| P115 protein [Borrelia burgdorferi 156a] gi|226320781|ref|ZP_03796337.1| p115 protein [Borrelia burgdorferi 29805] gi|215980768|gb|EEC21575.1| P115 protein [Borrelia burgdorferi 156a] gi|226233836|gb|EEH32561.1| p115 protein [Borrelia burgdorferi 29805] gi|312148111|gb|ADQ30770.1| P115 protein [Borrelia burgdorferi JD1] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|14591553|ref|NP_143635.1| chromosome assembly protein [Pyrococcus horikoshii OT3] gi|3258234|dbj|BAA30917.1| 1179aa long hypothetical chromosome assembly protein [Pyrococcus horikoshii OT3] Length = 1179 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ F+ + + I F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIERLELKGFKSYGNKKVVILFSRGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASR 62 Query: 87 IKKR 90 I Sbjct: 63 ISDL 66 >gi|225549219|ref|ZP_03770192.1| p115 protein [Borrelia burgdorferi 94a] gi|225370077|gb|EEG99517.1| p115 protein [Borrelia burgdorferi 94a] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|86610360|ref|YP_479122.1| chromosome segregation protein SMC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558902|gb|ABD03859.1| putative chromosome segregation protein SMC [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1188 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE++ F+ F + T+++G NG GKS++ + I + + R + Sbjct: 1 MYIKRIELTRFKSFGSTTSLPLLPGFTVISGPNGSGKSNILDGILFALGLSSSRGMRAER 60 Query: 87 IKKR 90 + Sbjct: 61 LLDL 64 >gi|218249696|ref|YP_002374578.1| P115 protein [Borrelia burgdorferi ZS7] gi|218164884|gb|ACK74945.1| P115 protein [Borrelia burgdorferi ZS7] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|226322041|ref|ZP_03797566.1| p115 protein [Borrelia burgdorferi Bol26] gi|226232631|gb|EEH31385.1| p115 protein [Borrelia burgdorferi Bol26] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|67609449|ref|XP_666991.1| Xenopus 14s cohesin smc1 subunit [Cryptosporidium hominis TU502] gi|54658074|gb|EAL36760.1| Xenopus 14s cohesin smc1 subunit [Cryptosporidium hominis] Length = 1349 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R L + + I +F+ + I F++ LT + G NG GKS+L +A+ + G + Sbjct: 25 RTLKCFIKKLIIENFKSYNGRHIIGPFSEGLTCIVGPNGSGKSNLMDALSFAL-GLSSND 83 Query: 82 KHGDSIKKRSIKTPMP 97 ++K + Sbjct: 84 MRSTNLKDLIYRPEQE 99 >gi|15594391|ref|NP_212179.1| P115 protein [Borrelia burgdorferi B31] gi|2687928|gb|AAC66436.1| P115 protein [Borrelia burgdorferi B31] Length = 819 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + I Sbjct: 7 LKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVEDIS 66 Query: 89 KR 90 Sbjct: 67 DL 68 >gi|257053797|ref|YP_003131630.1| chromosome segregation protein SMC [Halorhabdus utahensis DSM 12940] gi|256692560|gb|ACV12897.1| chromosome segregation protein SMC [Halorhabdus utahensis DSM 12940] Length = 1188 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +F+ F +I F + T ++G NG GKS++ +AI + + Sbjct: 1 MYITEVVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIVDAILFALGLARTSGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|221217511|ref|ZP_03588982.1| p115 protein [Borrelia burgdorferi 72a] gi|224533965|ref|ZP_03674550.1| p115 protein [Borrelia burgdorferi CA-11.2a] gi|225549774|ref|ZP_03770739.1| p115 protein [Borrelia burgdorferi 118a] gi|221192789|gb|EEE19005.1| p115 protein [Borrelia burgdorferi 72a] gi|224512968|gb|EEF83334.1| p115 protein [Borrelia burgdorferi CA-11.2a] gi|225369734|gb|EEG99182.1| p115 protein [Borrelia burgdorferi 118a] Length = 815 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|148241436|ref|YP_001226593.1| chromosome segregation ATPase [Synechococcus sp. RCC307] gi|147849746|emb|CAK27240.1| Chromosome segregation ATPase [Synechococcus sp. RCC307] Length = 1198 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++HF+ F I T+V G NG GKS++ + I + + R + Sbjct: 1 MVFIDQVSLTHFKSFGGSVTIPLEPGFTVVTGPNGSGKSNILDGILFCLGLASSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|87301336|ref|ZP_01084177.1| Chromosome segregation protein SMC [Synechococcus sp. WH 5701] gi|87284304|gb|EAQ76257.1| Chromosome segregation protein SMC [Synechococcus sp. WH 5701] Length = 1205 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E++ F+ F I T++ G NG GKS++ +A+ + + R + Sbjct: 1 MVYINQVELAQFKSFGGAMAIRLEPSFTVITGPNGSGKSNILDAVLFCLGLASSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|269792809|ref|YP_003317713.1| SMC domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100444|gb|ACZ19431.1| SMC domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 1134 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 27/57 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I ++ F+ F + ++ + + G NG GKS++ +A++W + R Sbjct: 1 MYIGRIGLNGFKSFGGVHELPLEMGMVAIVGPNGSGKSNILDALKWTLGEGSPSRLR 57 >gi|216263950|ref|ZP_03435944.1| P115 protein [Borrelia afzelii ACA-1] gi|215979994|gb|EEC20816.1| P115 protein [Borrelia afzelii ACA-1] Length = 816 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEVGENLSFIVGPNGCGKSNLIDAVRFCIGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|111114867|ref|YP_709485.1| P115 protein [Borrelia afzelii PKo] gi|110890141|gb|ABH01309.1| P115 protein [Borrelia afzelii PKo] Length = 816 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEVGENLSFIVGPNGCGKSNLIDAVRFCIGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|33860617|ref|NP_892178.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633559|emb|CAE18516.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 1194 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 1 MVYINQVEFENFKSFGGSVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|86609420|ref|YP_478182.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557962|gb|ABD02919.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1205 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +R+LI ++L + + +F+ + F + + G+NG GK+S+ EAI W+ + Y Sbjct: 3 SRRLIMRILSLALQNFKSHEDAV-FTFEPGINAICGENGAGKTSILEAIAWVLFDY 57 >gi|300711973|ref|YP_003737787.1| chromosome segregation protein SMC [Halalkalicoccus jeotgali B3] gi|299125656|gb|ADJ15995.1| chromosome segregation protein SMC [Halalkalicoccus jeotgali B3] Length = 1195 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +F+ F +I F + T V+G NG GKS++ +++ + R + Sbjct: 1 MHIRALVLENFKSFGRKTRIPFYEDFTTVSGPNGSGKSNIIDSVLFALGLARARGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|123965301|ref|YP_001010382.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9515] gi|123199667|gb|ABM71275.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9515] Length = 1194 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R D Sbjct: 1 MVHINQVEFENFKSFGGCVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|124024834|ref|YP_001013950.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. NATL1A] gi|123959902|gb|ABM74685.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. NATL1A] Length = 1201 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +++SHF+ F I + T+V G NG GKS++ + + + R D Sbjct: 1 MVHINHVDLSHFKSFGGSMSIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|313127260|ref|YP_004037530.1| condensin subunit smc [Halogeometricum borinquense DSM 11551] gi|312293625|gb|ADQ68085.1| condensin subunit Smc [Halogeometricum borinquense DSM 11551] Length = 1198 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F +I F + T+V G NG GKS++ + + + R + Sbjct: 1 MHIKELVLDGFKSFGRKTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|126695406|ref|YP_001090292.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9301] gi|126542449|gb|ABO16691.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9301] Length = 1196 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 3 LVHINQVEFENFKSFGGNVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLSNSRGMRAE 62 Query: 86 SIKKR 90 + Sbjct: 63 RLPDL 67 >gi|222478962|ref|YP_002565199.1| chromosome segregation protein SMC [Halorubrum lacusprofundi ATCC 49239] gi|222451864|gb|ACM56129.1| chromosome segregation protein SMC [Halorubrum lacusprofundi ATCC 49239] Length = 1193 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F +I F D T+V G NG GKS++ + + + R Sbjct: 1 MHITEVVLDGFKSFGRTTRIPFYDDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAKK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|16081854|ref|NP_394249.1| chromosome segregation protein related ptotein [Thermoplasma acidophilum DSM 1728] gi|10640066|emb|CAC11918.1| chromosome segregation protein related ptotein [Thermoplasma acidophilum] Length = 1140 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE +F+ F + I F L +++G NG GKS++ + + ++ + D + Sbjct: 4 YIERIEAHNFKSFRRKKVINFTKGLNVISGPNGSGKSNIGDMLLFVLGTKSIHAVRADRL 63 Query: 88 KKRSIK 93 K Sbjct: 64 SDLVSK 69 >gi|257413969|ref|ZP_04744813.2| putative RecF/RecN/SMC N domain protein [Roseburia intestinalis L1-82] gi|257201668|gb|EEU99952.1| putative RecF/RecN/SMC N domain protein [Roseburia intestinalis L1-82] Length = 805 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I+I +FRGF+E + EF ++ NG GK+S+ +AIEW G +R H Sbjct: 6 MNIKKIKIINFRGFSEEKIFEFEGKPFVMLTAPNGKGKTSVIDAIEWCMTGD-IKRLHEG 64 Query: 86 SIKKRSIKTPMPMC 99 + + T Sbjct: 65 YNDRNTNVTERKQN 78 >gi|332295829|ref|YP_004437752.1| SMC domain protein [Thermodesulfobium narugense DSM 14796] gi|332178932|gb|AEE14621.1| SMC domain protein [Thermodesulfobium narugense DSM 14796] Length = 1059 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG--YTQRRKHG 84 L ++ I F+ F + EF L ++ G NG GKS++ E+I+W G + R Sbjct: 1 MYLQNLRIFGFKSFYKEFIFEFDKKLNVIIGPNGSGKSNIGESIKWALGGRISSIRADSS 60 Query: 85 DSIKKRSIKTPMPMC 99 + K P+ Sbjct: 61 IELLFSGYKNFKPVN 75 >gi|323456696|gb|EGB12562.1| hypothetical protein AURANDRAFT_70503 [Aureococcus anophagefferens] Length = 1114 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EI +F+ F I F T V G NG GKS+L +A+ ++ ++ R + Sbjct: 6 RIRSLEIENFKSFGGKNVIAF-RGFTSVVGPNGAGKSNLMDAVSFVLGIHS-RHLRSSKL 63 Query: 88 KKRSIKTP 95 + K P Sbjct: 64 IELLHKGP 71 >gi|315230818|ref|YP_004071254.1| chromosome partition smc-like protein [Thermococcus barophilus MP] gi|315183846|gb|ADT84031.1| chromosome partition smc-like protein [Thermococcus barophilus MP] Length = 1087 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + +E+ F+ + + + F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YIEKLEMKGFKSYGSRKVVVPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRATR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + K P A Sbjct: 63 ISDLIFAGTKKEPPAKYA 80 >gi|157412408|ref|YP_001483274.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9215] gi|157386983|gb|ABV49688.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9215] Length = 1196 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 3 LVHINQVEFENFKSFGGNVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAE 62 Query: 86 SIKKR 90 + Sbjct: 63 RLPDL 67 >gi|256810817|ref|YP_003128186.1| chromosome segregation protein SMC [Methanocaldococcus fervens AG86] gi|256794017|gb|ACV24686.1| chromosome segregation protein SMC [Methanocaldococcus fervens AG86] Length = 1169 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L IE+ +F+ F + ++ T + G NG GKS++ +AI ++ + ++ Sbjct: 1 MVALERIELKNFKSF-KKLSLDIPKGFTAIVGPNGSGKSNIVDAILFVLGKTSAKKLRAS 59 >gi|148240460|ref|YP_001225847.1| chromosome segregation ATPase [Synechococcus sp. WH 7803] gi|147848999|emb|CAK24550.1| Chromosome segregation ATPase [Synechococcus sp. WH 7803] Length = 1201 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++HF+ F I T+V G NG GKS++ + + + R D Sbjct: 1 MVHINQVGLTHFKSFGGAMTIPLEPGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|308807783|ref|XP_003081202.1| putative chromosome associated protein (ISS) [Ostreococcus tauri] gi|116059664|emb|CAL55371.1| putative chromosome associated protein (ISS) [Ostreococcus tauri] Length = 1562 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ + + F+ + E ++F D L + G NG GKS+L AI ++ Sbjct: 366 VMRIKQVVVEGFKTYREQTVVDFDDGLNCIVGANGSGKSNLFHAIRFVL 414 >gi|289192395|ref|YP_003458336.1| chromosome segregation protein SMC [Methanocaldococcus sp. FS406-22] gi|288938845|gb|ADC69600.1| chromosome segregation protein SMC [Methanocaldococcus sp. FS406-22] Length = 1169 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L IE+ +F+ F + ++ T + G NG GKS++ +AI ++ + ++ + Sbjct: 1 MVTLEKIELKNFKSF-KKLSLDIPKGFTAIVGPNGSGKSNIVDAILFVLGKTSAKKLRAN 59 >gi|123967606|ref|YP_001008464.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. AS9601] gi|123197716|gb|ABM69357.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. AS9601] Length = 1196 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 3 LVHINQVEFENFKSFGGNVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAE 62 Query: 86 SIKKR 90 + Sbjct: 63 RLPDL 67 >gi|55378409|ref|YP_136259.1| chromosome segregation protein [Haloarcula marismortui ATCC 43049] gi|55231134|gb|AAV46553.1| chromosome segregation protein [Haloarcula marismortui ATCC 43049] Length = 1195 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +F+ F +I F + T ++G NG GKS++ +AI + + Sbjct: 1 MHIKELVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIIDAILFALGLARTSGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|254525598|ref|ZP_05137650.1| chromosome segregation protein SMC [Prochlorococcus marinus str. MIT 9202] gi|221537022|gb|EEE39475.1| chromosome segregation protein SMC [Prochlorococcus marinus str. MIT 9202] Length = 1194 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 1 MVHINQVEFENFKSFGGNVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|292654853|ref|YP_003534750.1| chromosome segregation protein SMC [Haloferax volcanii DS2] gi|291370379|gb|ADE02606.1| chromosome segregation protein SMC [Haloferax volcanii DS2] Length = 1240 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F+ F +I F + T+V G NG GKS++ + + + R + Sbjct: 1 MHIKELVLDGFKSFGRPTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|212224221|ref|YP_002307457.1| chromosome segregation ATPase [Thermococcus onnurineus NA1] gi|212009178|gb|ACJ16560.1| chromosome segregation ATPase [Thermococcus onnurineus NA1] Length = 1188 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + IE+ F+ + + + + T + G NG GKS++ +A+ ++ G + + Sbjct: 3 YIEKIEMKGFKSYGNRKVVVPLSKGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMRATR 62 Query: 85 -DSIKKRSIKTPMPMCMA 101 + KT P A Sbjct: 63 ISDLIFAGTKTEPPAKYA 80 >gi|291333631|gb|ADD93323.1| putative RecF/RecN/SMC N terminal domain protein [uncultured archaeon MedDCM-OCT-S09-C50] Length = 1304 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +F+ F + T + G NG GKS+ +AI+++ + R + Sbjct: 1 MYLKSLEVLNFKSFKGEVTVPLDRGFTAITGPNGSGKSNCGDAIQFVLGPKSNRVIRAQN 60 Query: 87 ---IKKRSIKTPMP 97 + K P Sbjct: 61 STDLIFNGGKNSKP 74 >gi|15669839|ref|NP_248653.1| chromosome segretation protein [Methanocaldococcus jannaschii DSM 2661] gi|18202582|sp|Q59037|SMC_METJA RecName: Full=Chromosome partition protein smc homolog gi|2826443|gb|AAB99663.1| chromosome segretation protein (smc1) [Methanocaldococcus jannaschii DSM 2661] Length = 1169 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L IE+ +F+ F + ++ T + G NG GKS++ +AI ++ + ++ + Sbjct: 1 MVTLEKIELKNFKSF-KKLSLDIPKGFTAIVGPNGSGKSNIVDAILFVLGKTSAKKLRAN 59 >gi|116073799|ref|ZP_01471061.1| chromosome segregation protein SMC [Synechococcus sp. RS9916] gi|116069104|gb|EAU74856.1| chromosome segregation protein SMC [Synechococcus sp. RS9916] Length = 1202 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + HF+ F I T+V G NG GKS++ + + + + R D Sbjct: 1 MVHINQVGFKHFKSFGGAVTIPLETGFTVVTGPNGSGKSNILDGVLFCLGLASSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|139436971|ref|ZP_01771131.1| Hypothetical protein COLAER_00104 [Collinsella aerofaciens ATCC 25986] gi|133776618|gb|EBA40438.1| Hypothetical protein COLAER_00104 [Collinsella aerofaciens ATCC 25986] Length = 1159 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI---KKRSIKTPMPMCMA 101 F LT++ G NG GKS++S++I W+ + ++ G ++ P+ +A Sbjct: 3 FEPGLTVIVGPNGSGKSNISDSILWVLGEQSAKQLRGQAMEDVIFSGSSARKPVGVA 59 >gi|224534950|ref|ZP_03675519.1| p115 protein [Borrelia spielmanii A14S] gi|224513890|gb|EEF84215.1| p115 protein [Borrelia spielmanii A14S] Length = 815 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q++E ++L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIALLGFKSFLNRQELEIGENLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|154150482|ref|YP_001404100.1| SMC domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999034|gb|ABS55457.1| SMC domain protein [Methanoregula boonei 6A8] Length = 812 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+++F+ F +I+F D +T + G NG GKSSL AI + YG D I Sbjct: 3 LDRLELTNFKRFR-HVEIKFQDGITGILGNNGTGKSSLVTAIFFALYGVKATGISADYIV 61 Query: 89 KRSIKTPMPMCMAV 102 +P C + Sbjct: 62 -SGFASPKEKCEVI 74 >gi|257389041|ref|YP_003178814.1| chromosome segregation protein SMC [Halomicrobium mukohataei DSM 12286] gi|257171348|gb|ACV49107.1| chromosome segregation protein SMC [Halomicrobium mukohataei DSM 12286] Length = 1192 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +F+ F +I F + T+V G NG GKS++ ++I + + Sbjct: 1 MHIKELVLDNFKSFGRKTRIPFYEDFTVVTGPNGSGKSNIIDSILFALGLARTSGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|325697439|gb|EGD39325.1| RecF/RecN/SMC N domain protein [Streptococcus sanguinis SK160] Length = 899 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ F + I+F+ +T + G NG+GK+++ +AIE G R Sbjct: 1 MKIKKILLYNFKNFRQKTIIDFSKDITFLVGPNGFGKTTIFDAIELGLTGNLSR 54 >gi|312214936|emb|CBX94890.1| similar to structural maintenance of chromosomes protein 1A [Leptosphaeria maculans] Length = 1283 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ ++ + F D T + G NG GKS+ +AI ++ + D Sbjct: 3 KLVRLELCNFKSYSGRHTLLFGDSYFTSIIGPNGAGKSNSMDAISFVLGVKSA-TLRSDK 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDMVYR 68 >gi|242398710|ref|YP_002994134.1| chromosome segregation ATPase [Thermococcus sibiricus MM 739] gi|242265103|gb|ACS89785.1| chromosome segregation ATPase [Thermococcus sibiricus MM 739] Length = 1177 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 + +E+ F+ + + + F+ T + G NG GKS++ +AI ++ G + + Sbjct: 3 YVEKLEMRGFKSYGSRKIVVPFSRGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRATR 62 Query: 86 --SIKKRSIKTPMPMCMA 101 + K P A Sbjct: 63 IGDLIFAGTKEEAPAKYA 80 >gi|330508914|ref|YP_004385342.1| hypothetical protein MCON_3242 [Methanosaeta concilii GP-6] gi|328929722|gb|AEB69524.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 1059 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +F+ + IEF + LT + G NG GKS++ EAI W YG + Sbjct: 1 MLLNKLVLRNFKKYR-RATIEFQEGLTGIIGSNGSGKSTIVEAIAWALYGNKASLIKRNL 59 Query: 87 IKKRSIKTPMPMCMAV 102 IK P+ + + Sbjct: 60 IKNTHANENEPVEITL 75 >gi|300707107|ref|XP_002995776.1| hypothetical protein NCER_101251 [Nosema ceranae BRL01] gi|239604988|gb|EEQ82105.1| hypothetical protein NCER_101251 [Nosema ceranae BRL01] Length = 871 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 30/50 (60%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++K+ +EI++F+ + I F H T + G NG GKS++ +A+ ++ Sbjct: 1 MYKIKSLEITNFKSYKSSHVIPFDSHFTCIIGPNGSGKSNILDAMVFVMT 50 >gi|312880403|ref|ZP_07740203.1| condensin subunit Smc [Aminomonas paucivorans DSM 12260] gi|310783694|gb|EFQ24092.1| condensin subunit Smc [Aminomonas paucivorans DSM 12260] Length = 1142 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 21/57 (36%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + F+ F + V G NG GKS+L +A+ W R Sbjct: 1 MYIARLHLRGFKSFGGSHDLALGSGFVAVVGPNGSGKSNLLDALRWTLGDSHPGRLR 57 >gi|78778444|ref|YP_396556.1| condensin subunit Smc [Prochlorococcus marinus str. MIT 9312] gi|78711943|gb|ABB49120.1| condensin subunit Smc [Prochlorococcus marinus str. MIT 9312] Length = 1196 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E +F+ F KI + T+V G NG GKS++ + I + R + Sbjct: 3 LVHINQVEFENFKSFGGSVKIPLEEGFTVVTGPNGSGKSNILDGILFCLGLANSRGMRAE 62 Query: 86 SIKKR 90 + Sbjct: 63 RLPDL 67 >gi|260434986|ref|ZP_05788956.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109] gi|260412860|gb|EEX06156.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109] Length = 1202 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++HF+ F I + T+V G NG GKS++ + + + T R + Sbjct: 1 MVHINQVGLTHFKSFGGAMTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAE 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|325860349|ref|ZP_08173468.1| hypothetical protein HMPREF9303_0079 [Prevotella denticola CRIS 18C-A] gi|325482143|gb|EGC85157.1| hypothetical protein HMPREF9303_0079 [Prevotella denticola CRIS 18C-A] Length = 83 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 29 LLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-----K 82 + +I I +FR + + IE LT++ G NG GK++ EA++WLF T++ Sbjct: 3 IKEIRIKNFRSYYGDNNHIEVTPGLTLILGDNGDGKTTFFEALQWLFNTTTEKGNLDPHV 62 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 IK + +T +C+ V Sbjct: 63 GNAKIKVGNWRTRRGLCLYV 82 >gi|58262882|ref|XP_568851.1| cohesin complex subunit psm1 [Cryptococcus neoformans var. neoformans JEC21] gi|57223501|gb|AAW41544.1| cohesin complex subunit psm1, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1202 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +E+ +F+ + E Q I F D + G NG GKS+L +AI ++ + + Sbjct: 1 MPLQRLELYNFKSYREKQVISFGDVPFVSIIGPNGAGKSNLMDAISFVLGVKSAQ-LRST 59 Query: 86 SIKKRSIKTPM 96 +K + Sbjct: 60 QLKDLIYRGRR 70 >gi|134108242|ref|XP_777072.1| hypothetical protein CNBB3040 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259757|gb|EAL22425.1| hypothetical protein CNBB3040 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1202 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +E+ +F+ + E Q I F D + G NG GKS+L +AI ++ + + Sbjct: 1 MPLQRLELYNFKSYREKQVISFGDVPFVSIIGPNGAGKSNLMDAISFVLGVKSAQ-LRST 59 Query: 86 SIKKRSIKTPM 96 +K + Sbjct: 60 QLKDLIYRGRR 70 >gi|33863851|ref|NP_895411.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9313] gi|33635434|emb|CAE21759.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9313] Length = 1202 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++ F+ F I + T+V G NG GKS++ + + + T R D Sbjct: 1 MVHINQVGLTQFKSFGGSMTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|300726126|ref|ZP_07059583.1| RecF/RecN/SMC N-terminal domain protein [Prevotella bryantii B14] gi|299776596|gb|EFI73149.1| RecF/RecN/SMC N-terminal domain protein [Prevotella bryantii B14] Length = 722 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +I I +FR + + K EF+D LT++ G NG GK++ EA++WLF + Sbjct: 3 IKEICIKNFRSYYGDNNKFEFSDGLTLILGDNGDGKTTFFEALQWLFNTTIDKG 56 >gi|108804223|ref|YP_644160.1| SMC protein-like protein [Rubrobacter xylanophilus DSM 9941] gi|108765466|gb|ABG04348.1| SMC protein-like protein [Rubrobacter xylanophilus DSM 9941] Length = 1091 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I F+ F ++ +T + G NG GKS++++A+ + + + Sbjct: 2 LSAIYIKGFKTFARPVRMPLEPGVTAIVGPNGSGKSNITDAVLFALGEQSPGVLRAGGMS 61 Query: 89 KR 90 Sbjct: 62 DL 63 >gi|22299987|ref|NP_683234.1| recombination protein F [Thermosynechococcus elongatus BP-1] gi|51316460|sp|Q8DG79|RECF_THEEB RecName: Full=DNA replication and repair protein recF gi|22296172|dbj|BAC09996.1| DNA repair and genetic recombination protein [Thermosynechococcus elongatus BP-1] Length = 379 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR ++E Q + FA TI+ G N GKS+L EA+EWL + R Sbjct: 1 MFLKSLHLRHFRNYSE-QSVTFAAPKTILVGDNAQGKSNLLEAVEWLATLQSHRTHRDRD 59 Query: 87 IKKRSIKT 94 + ++ ++ Sbjct: 60 LIQQGHES 67 >gi|298384285|ref|ZP_06993845.1| hypothetical protein HMPREF9007_00882 [Bacteroides sp. 1_1_14] gi|298262564|gb|EFI05428.1| hypothetical protein HMPREF9007_00882 [Bacteroides sp. 1_1_14] Length = 723 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I++FR + EF+ LT++ G NG GK++ EA+EWL Sbjct: 3 IKSVTINNFRSYYGENTFEFSKGLTLIIGGNGDGKTTFFEALEWLLDT 50 >gi|113954217|ref|YP_731649.1| chromosome segregation protein SMC [Synechococcus sp. CC9311] gi|113881568|gb|ABI46526.1| chromosome segregation protein SMC [Synechococcus sp. CC9311] Length = 1201 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++HF+ F I T+V G NG GKS++ + + + R D Sbjct: 1 MVHINQVGLTHFKSFGGAMTIPLETGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|260945191|ref|XP_002616893.1| hypothetical protein CLUG_02337 [Clavispora lusitaniae ATCC 42720] gi|238848747|gb|EEQ38211.1| hypothetical protein CLUG_02337 [Clavispora lusitaniae ATCC 42720] Length = 1190 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + KI F D T + G NG GKS++ +AI ++ + + Sbjct: 3 RLVGLELHNFKSYKGTAKIGFGDASFTSIIGPNGAGKSNMMDAISFVLGVQSS-HLRSQN 61 Query: 87 IKKRSIKTPMPM 98 +K + M Sbjct: 62 LKDLVYRGRAEM 73 >gi|219684901|ref|ZP_03539843.1| P115 protein [Borrelia garinii PBr] gi|219671846|gb|EED28901.1| P115 protein [Borrelia garinii PBr] Length = 815 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E + +L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLFGFKSFLNRQEFEISGNLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|218961815|ref|YP_001741590.1| putative putative DNA repair and genetic recombination (recF-like) [Candidatus Cloacamonas acidaminovorans] gi|167730472|emb|CAO81384.1| putative putative DNA repair and genetic recombination (recF-like) [Candidatus Cloacamonas acidaminovorans] Length = 358 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +FR + + + +F ++ G NG GK++L EAI + G + R H + Sbjct: 1 MNLAKIELENFRSYRQNE-FDFNPQGCLIIGPNGCGKTNLLEAIAYCSIGKSIRFHHDEE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|300521542|gb|ADK25982.1| SMC chromosome segregation ATPase [Candidatus Nitrososphaera gargensis] Length = 1186 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +E+ F+ F + + F L V G NG GKS++ +AI + + + Sbjct: 5 LVHIKKLEVYGFKSFGFKNTVVHFEKGLIAVTGPNGSGKSNILDAIMFAIGENSPKALRV 64 Query: 85 DSIK 88 D + Sbjct: 65 DKFQ 68 >gi|323343433|ref|ZP_08083660.1| ATPase [Prevotella oralis ATCC 33269] gi|323095252|gb|EFZ37826.1| ATPase [Prevotella oralis ATCC 33269] Length = 722 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +I I +FR + + EF+D LT++ G NG GK++ +A++WLF + Sbjct: 3 IKEIRIKNFRSYYGDNNIFEFSDGLTLILGDNGDGKTTFFDALQWLFNTTIDKG 56 >gi|324991598|gb|EGC23531.1| RecF/RecN/SMC N domain protein [Streptococcus sanguinis SK353] Length = 887 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I I +F+ + I+F D++T+ G NG+GK+++ +AIE G +R D Sbjct: 1 MRIQKILIKNFKNVKGTKVIDFQDNVTLFVGPNGFGKTTIFDAIELSLTGKIRRITESDY 60 Query: 87 IKKRS 91 RS Sbjct: 61 TDGRS 65 >gi|219685402|ref|ZP_03540221.1| p115 protein [Borrelia garinii Far04] gi|219673175|gb|EED30195.1| p115 protein [Borrelia garinii Far04] Length = 815 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E + +L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLFGFKSFLNRQEFEISGNLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|57640952|ref|YP_183430.1| chromosome segregation ATPase [Thermococcus kodakarensis KOD1] gi|57159276|dbj|BAD85206.1| chromosome segregation ATPase [Thermococcus kodakarensis KOD1] Length = 1189 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ + IE+ F+ + + + A T + G NG GKS++ +A+ ++ G + + Sbjct: 1 MMPYIEKIEMKGFKSYGNKKVVVPLARGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMR 60 Query: 84 GDSIKKR 90 I Sbjct: 61 ASRISDL 67 >gi|33322518|gb|AAQ06987.1|AF496312_2 chromosome partition protein Smc [Lactobacillus delbrueckii subsp. lactis] Length = 45 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 L + + F+ F + I+F +T + G NG GKS+++E+ Sbjct: 1 MPLTSLILEGFKSFADKTVIDFTKGITGIVGPNGSGKSNITES 43 >gi|51598307|ref|YP_072495.1| P115 protein [Borrelia garinii PBi] gi|51572878|gb|AAU06903.1| P115 protein [Borrelia garinii PBi] Length = 815 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + F+ F Q+ E +L+ + G NG GKS+L +A+ + + + Sbjct: 1 MVLKKIVLLGFKSFLNRQEFEIDGNLSFIVGPNGCGKSNLIDAVRFCMGEDNLKFLRVED 60 Query: 87 IKKR 90 I Sbjct: 61 ISDL 64 >gi|50553158|ref|XP_503989.1| YALI0E15620p [Yarrowia lipolytica] gi|49649858|emb|CAG79582.1| YALI0E15620p [Yarrowia lipolytica] Length = 1220 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IE+ +F+ + + +++ D + + G NG GKS++ +AI ++ + + + Sbjct: 4 LKAIELCNFKSYRDTHRVDLGDSSFSAIIGPNGSGKSNMMDAISFVLGVRSSQ-LRSTQL 62 Query: 88 KKRSIK 93 K + Sbjct: 63 KDLIYR 68 >gi|110667233|ref|YP_657044.1| chromosome partition protein [Haloquadratum walsbyi DSM 16790] gi|109624980|emb|CAJ51393.1| chromosome partition protein [Haloquadratum walsbyi DSM 16790] Length = 1198 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F +I F + T+V G NG GKS++ + + + R + Sbjct: 1 MHIKTLILDGFKSFGRATEIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|261402663|ref|YP_003246887.1| chromosome segregation protein SMC [Methanocaldococcus vulcanius M7] gi|261369656|gb|ACX72405.1| chromosome segregation protein SMC [Methanocaldococcus vulcanius M7] Length = 1172 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +F+ F + ++ T + G NG GKS++ +AI ++ + ++ + Sbjct: 4 LEKIELKNFKSF-KKLSLDIPKGFTAIVGPNGSGKSNIVDAILFVLGKTSAKKLRANK 60 >gi|254458045|ref|ZP_05071472.1| RecF/RecN/SMC N terminal domain, putative [Campylobacterales bacterium GD 1] gi|207085438|gb|EDZ62723.1| RecF/RecN/SMC N terminal domain, putative [Campylobacterales bacterium GD 1] Length = 789 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F+ +T IEF + L + G+NG GKS++ +AI + YG ++R + D ++ Sbjct: 3 LSKLHLENFKKYTSYD-IEFGEGLVGIIGKNGSGKSTIFDAILFALYGEAKKRGNKDILR 61 >gi|33864877|ref|NP_896436.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus sp. WH 8102] gi|33632400|emb|CAE06856.1| putative chromosome segregation protein, SMC ATPase superfamily [Synechococcus sp. WH 8102] Length = 1203 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + ++ F+ F I T+V G NG GKS++ + + + T R D Sbjct: 1 MVHINQVGLTQFKSFGGAMTIPLEQGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAD 60 Query: 86 SIKKR 90 + Sbjct: 61 RLPDL 65 >gi|322369946|ref|ZP_08044508.1| chromosome segregation protein SMC [Haladaptatus paucihalophilus DX253] gi|320550282|gb|EFW91934.1| chromosome segregation protein SMC [Haladaptatus paucihalophilus DX253] Length = 1192 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F+ F +I F + T+V G NG GKS++ +++ + R + Sbjct: 1 MHIKTLVLDKFKSFGRKTEIPFYEDFTVVTGPNGSGKSNIIDSVLFALGLARTRGIRAEK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|161528159|ref|YP_001581985.1| SMC domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339460|gb|ABX12547.1| SMC domain protein [Nitrosopumilus maritimus SCM1] Length = 1174 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +EI F+ F + ++F L ++G NG GKS++ +AI + + Sbjct: 1 MVHVKKVEIFGFKSFGFKNTTVQFEPGLVSISGPNGSGKSNILDAIIFAMGENKPKVMRV 60 Query: 85 DSIK 88 D ++ Sbjct: 61 DKLR 64 >gi|312621131|ref|YP_004022744.1| DNA replication and repair protein recf [Caldicellulosiruptor kronotskyensis 2002] gi|312201598|gb|ADQ44925.1| DNA replication and repair protein RecF [Caldicellulosiruptor kronotskyensis 2002] Length = 353 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + +FRG+ + EF D + ++ G N GK+SL EA+ + G + + + D+ Sbjct: 1 MKIKSIYVENFRGYKQRF-FEFKDKMNLIVGNNASGKTSLLEALYFCMCGKSFKSRDIDA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I S + M V +Y + Sbjct: 60 INFDSFYFKLEMLAEVGDTEYNV 82 >gi|224004996|ref|XP_002296149.1| smc1 [Thalassiosira pseudonana CCMP1335] gi|209586181|gb|ACI64866.1| smc1 [Thalassiosira pseudonana CCMP1335] Length = 1241 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ +F+ + Q+I + T V G NG GKS+L +AI ++ + R Sbjct: 5 MPVTYLELENFKSYAGTQRIGPFFNFTCVIGPNGSGKSNLMDAISFILGVQS-RDLRSSQ 63 Query: 87 IKKRSIKTP 95 +K + P Sbjct: 64 MKDLIFRPP 72 >gi|222528061|ref|YP_002571943.1| DNA replication and repair protein RecF [Caldicellulosiruptor bescii DSM 6725] gi|222454908|gb|ACM59170.1| DNA replication and repair protein RecF [Caldicellulosiruptor bescii DSM 6725] Length = 353 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + +FRG+ + EF D + ++ G N GK+SL EA+ + G + + + D+ Sbjct: 1 MKIKSIYVENFRGYKQRF-FEFKDKMNLIVGNNASGKTSLLEALYFCMCGKSFKSRDIDA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I S + M V +Y + Sbjct: 60 INFDSFYFKLEMLAEVGDTEYNV 82 >gi|300777524|ref|ZP_07087382.1| SMC domain protein [Chryseobacterium gleum ATCC 35910] gi|300503034|gb|EFK34174.1| SMC domain protein [Chryseobacterium gleum ATCC 35910] Length = 692 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+I++FR F E ++F D + +V G N GKS+L A+ + +R + D Sbjct: 1 MYISQIKITNFRNF-ENTTVDFNDGINVVIGHNNAGKSNLVSALSLVMDNSKSKRLNIDD 59 Query: 87 IKKR 90 K Sbjct: 60 FYKL 63 >gi|51891142|ref|YP_073833.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] gi|81692267|sp|Q67TK4|RECF_SYMTH RecName: Full=DNA replication and repair protein recF gi|51854831|dbj|BAD38989.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] Length = 375 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + + I F+ L ++ G N GK++L EAI +L G + R Sbjct: 1 MYLSTLQLGAFRNY-DSLTIHFSPGLNVLYGDNAQGKTNLLEAIHFLATGRSHRTSRDPD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 MVQEGRE 66 >gi|76152544|gb|AAX24235.2| SJCHGC07985 protein [Schistosoma japonicum] Length = 194 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 YY I + + I F+ + + +I+ F + G NG GKS++ +AI +L Sbjct: 3 YYRDFFIMYIKSLVIDGFKSYCQRTEIDGFDPQFNAITGLNGSGKSNILDAICFLLGITN 62 Query: 79 QRRKHGDSIKKRSIK 93 ++ + K Sbjct: 63 LSHVRAANLHELVYK 77 >gi|330508286|ref|YP_004384714.1| chromosome segregation protein SMC [Methanosaeta concilii GP-6] gi|328929094|gb|AEB68896.1| chromosome segregation protein SMC [Methanosaeta concilii GP-6] Length = 1171 Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 31/67 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ +F+ F + ++ + V G NG GKS++ +A+ + + R + Sbjct: 1 MYIKEVELKNFKSFGKSIRVPLKNDFVTVTGPNGSGKSNIVDALLFALCLSSSRAMRAER 60 Query: 87 IKKRSIK 93 + + Sbjct: 61 LPDLIYR 67 >gi|217966464|ref|YP_002351970.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] gi|217335563|gb|ACK41356.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] Length = 340 Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +FR F++ + F D + ++ G NG GK+S+ EA+ +L + R Sbjct: 6 MVIESIYLRNFRNFSDFKT-NFKDGINVIYGPNGSGKTSILEAVAYLSNPRSFRGARDHQ 64 Query: 87 IKKRSIK 93 + K K Sbjct: 65 LIKLGEK 71 >gi|296109742|ref|YP_003616691.1| chromosome segregation protein SMC [Methanocaldococcus infernus ME] gi|295434556|gb|ADG13727.1| chromosome segregation protein SMC [Methanocaldococcus infernus ME] Length = 1142 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ +F+ F + +E T + G NG GKS++ +AI ++ + R+ + Sbjct: 2 LKRIELKNFKSFKSL-SLEIPKGFTAIVGPNGSGKSNIVDAILFVLGKSSARKLRANK 58 >gi|240275919|gb|EER39432.1| chromosome segregation protein [Ajellomyces capsulatus H143] Length = 1219 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ + Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHMGREE 60 Query: 86 SIKKRSIKTPMPMCMAVPR 104 ++ P P+ + V R Sbjct: 61 RQALLHVRKPKPIQLIVGR 79 >gi|114563256|ref|YP_750769.1| ATPase involved in DNA repair-like protein [Shewanella frigidimarina NCIMB 400] gi|114334549|gb|ABI71931.1| ATPase involved in DNA repair-like protein [Shewanella frigidimarina NCIMB 400] Length = 686 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL+ +EI++FR F Q I+FA +T+++G+N GK++L A+ W Y T Sbjct: 1 MKLIKLEINNFRQFYGKQIIDFASESNKGVTLIHGENNGGKTALLNALRWCLYEETTDNL 60 Query: 83 HGDS 86 Sbjct: 61 QDSK 64 >gi|76801260|ref|YP_326268.1| chromosome partition protein [Natronomonas pharaonis DSM 2160] gi|76557125|emb|CAI48699.1| chromosome partition protein [Natronomonas pharaonis DSM 2160] Length = 1192 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +F+ F + KI + T ++G NG GKS++ ++I + D Sbjct: 1 MHIKALVLDNFKSFGQKTKIPLYEDFTTISGPNGSGKSNIIDSILFALGLARTSGIRADK 60 Query: 87 IKKR 90 + Sbjct: 61 LTDL 64 >gi|225563326|gb|EEH11605.1| chromosome segregation protein sudA [Ajellomyces capsulatus G186AR] Length = 1219 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ + Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHMGREE 60 Query: 86 SIKKRSIKTPMPMCMAVPR 104 ++ P P+ + V R Sbjct: 61 RQALLHVRKPKPIQLIVGR 79 >gi|325093282|gb|EGC46592.1| chromosome segregation protein [Ajellomyces capsulatus H88] Length = 1219 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ + Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHMGREE 60 Query: 86 SIKKRSIKTPMPMCMAVPR 104 ++ P P+ + V R Sbjct: 61 RQALLHVRKPKPIQLIVGR 79 >gi|315611794|ref|ZP_07886716.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] gi|315316209|gb|EFU64239.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] Length = 880 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +F+ + I+F +++T+ G NG+GK+++ +AIE G +R + D Sbjct: 1 MKIKKILIKNFKNIKGTRIIDFQENVTLFVGPNGFGKTTIFDAIELSLTGKIRRIEESDY 60 Query: 87 IK-KRSIKTP 95 + S TP Sbjct: 61 SDGRSSFSTP 70 >gi|118575575|ref|YP_875318.1| chromosome segregation ATPase [Cenarchaeum symbiosum A] gi|118194096|gb|ABK77014.1| chromosome segregation ATPase [Cenarchaeum symbiosum A] Length = 1175 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +EI F+ F +EF L ++G NG GKS++ +AI + + Sbjct: 1 MVHIRKVEIFGFKSFGFRNTSVEFRPGLVSISGPNGSGKSNILDAIIFALGENRPKAMR 59 >gi|156088035|ref|XP_001611424.1| RecF/RecN/SMC N terminal domain containing protein [Babesia bovis] gi|154798678|gb|EDO07856.1| RecF/RecN/SMC N terminal domain containing protein [Babesia bovis] Length = 1205 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 29/63 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + + +F+ ++ GQNG GKS++ A+ + ++ Sbjct: 1 MYIKEVNLCGFRTYRDQCSFQFSKGYNVIVGQNGSGKSNVLLAVSFALAENLEQTNREYY 60 Query: 87 IKK 89 + + Sbjct: 61 LYR 63 >gi|254173478|ref|ZP_04880150.1| chromosome segregation protein SMC [Thermococcus sp. AM4] gi|214032170|gb|EEB73000.1| chromosome segregation protein SMC [Thermococcus sp. AM4] Length = 1192 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ F+ + + + + T + G NG GKS++ +A+ ++ G + + Sbjct: 3 YIEKIEMKGFKSYGNRKVVVPLSKGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMRATR 62 Query: 87 IKKR 90 I Sbjct: 63 ISDL 66 >gi|303389012|ref|XP_003072739.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] gi|303301881|gb|ADM11379.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] Length = 1159 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +F+ + I D T + G NG GKS++ +A+ + G + ++ Sbjct: 1 MGLERVEVENFKSYAGFHIIGPFDRFTCIVGPNGSGKSNIMDAVTFCL-GIGSKHLRANN 59 Query: 87 IK 88 I+ Sbjct: 60 IR 61 >gi|240103229|ref|YP_002959538.1| Chromosome segregation protein SMC (smc1) [Thermococcus gammatolerans EJ3] gi|239910783|gb|ACS33674.1| Chromosome segregation protein SMC (smc1) [Thermococcus gammatolerans EJ3] Length = 1192 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ F+ + + + + T + G NG GKS++ +A+ ++ G + + Sbjct: 3 YIEKIEMKGFKSYGNRKVVVPLSKGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMRATR 62 Query: 87 IKKRSIKTPMPMCMAVPRCKY 107 I A P KY Sbjct: 63 ISDLIFAG----NRAEPPAKY 79 >gi|125624996|ref|YP_001033479.1| recombination protein F [Lactococcus lactis subsp. cremoris MG1363] gi|166220713|sp|A2RNA8|RECF_LACLM RecName: Full=DNA replication and repair protein recF gi|124493804|emb|CAL98796.1| DNA replication and repair protein recF [Lactococcus lactis subsp. cremoris MG1363] gi|300071794|gb|ADJ61194.1| recombination protein F [Lactococcus lactis subsp. cremoris NZ9000] Length = 359 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +FR + ++ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 1 MKLKQIELKNFRNYEDL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKE 59 Query: 87 IKKRS 91 + + S Sbjct: 60 LIRWS 64 >gi|297619488|ref|YP_003707593.1| chromosome segregation protein SMC [Methanococcus voltae A3] gi|297378465|gb|ADI36620.1| chromosome segregation protein SMC [Methanococcus voltae A3] Length = 1199 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 1 MISISEIHLKNFKSF-KNTKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|33578097|gb|AAQ22369.1| chromosomal segregation protein [Methanococcus voltae PS] Length = 1199 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 1 MISISEIHLKNFKSF-KNTKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|169841780|ref|ZP_02874889.1| chromosome segregation protein SMC [candidate division TM7 single-cell isolate TM7a] Length = 55 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E++ F+ F EF +T + G NG GKS++ +AI Sbjct: 1 MYLKALELTGFKSFANKTVEEFDSGITSIVGPNGSGKSNILDAI 44 >gi|55670515|pdb|1W1W|A Chain A, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670516|pdb|1W1W|B Chain B, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670517|pdb|1W1W|C Chain C, Sc Smc1hd:scc1-C Complex, Atpgs gi|55670518|pdb|1W1W|D Chain D, Sc Smc1hd:scc1-C Complex, Atpgs Length = 430 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|167044009|gb|ABZ08695.1| putative SMC family, C-terminal domain protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 1169 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++I F+ F + + F L ++G NG GKS++ +AI + R Sbjct: 1 MVHIKKVDIFGFKSFGFKNTSVNFEPGLVSISGPNGSGKSNILDAIVFAMGENKARVMRQ 60 Query: 85 DSIK 88 +++ Sbjct: 61 PNLR 64 >gi|167045288|gb|ABZ09946.1| putative SMC family, C-terminal domain protein [uncultured marine crenarchaeote HF4000_APKG9P22] Length = 1169 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++I F+ F + + F L ++G NG GKS++ +AI + R Sbjct: 1 MVHIKKVDIFGFKSFGFKNTSVNFEPGLVSISGPNGSGKSNILDAIVFAMGENKARVMRQ 60 Query: 85 DSIK 88 +++ Sbjct: 61 PNLR 64 >gi|66362948|ref|XP_628440.1| SMC3'SMC type chromosomal ABC ATpase' [Cryptosporidium parvum Iowa II] gi|46229806|gb|EAK90624.1| SMC3'SMC type chromosomal ABC ATpase' [Cryptosporidium parvum Iowa II] Length = 1304 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I + +++I F+ + + I F + G NG GKS++ AI++L Sbjct: 30 IMYIKELKICGFKTYRDETTISFHPGCNCIVGLNGSGKSNILAAIQFLL 78 >gi|302870735|ref|YP_003839371.1| DNA replication and repair protein RecF [Caldicellulosiruptor obsidiansis OB47] gi|302573594|gb|ADL41385.1| DNA replication and repair protein RecF [Caldicellulosiruptor obsidiansis OB47] Length = 353 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I I +FR + EF D + ++ G N GK+SL EA+ + G + + + D I Sbjct: 3 IKSIYIENFRSYH-QSFFEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDVDLIN 61 Query: 89 KRSIKTPMPMCMAVPRCKY 107 S + M V +Y Sbjct: 62 FDSQYFKLEMVAEVSGVEY 80 >gi|206900621|ref|YP_002251531.1| DNA replication and repair protein RecF, putative [Dictyoglomus thermophilum H-6-12] gi|206739724|gb|ACI18782.1| DNA replication and repair protein RecF, putative [Dictyoglomus thermophilum H-6-12] Length = 340 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +FR F++ F D + ++ G NG GK+S+ EAI +L + R Sbjct: 6 MLIESISLKNFRNFSDFST-SFKDGINVIYGPNGSGKTSILEAIAYLSNPRSFRSARDYQ 64 Query: 87 IKKRSIK 93 + K K Sbjct: 65 LIKIGEK 71 >gi|126179563|ref|YP_001047528.1| SMC domain-containing protein [Methanoculleus marisnigri JR1] gi|125862357|gb|ABN57546.1| SMC domain protein [Methanoculleus marisnigri JR1] Length = 1057 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +F+ F + Q+I F D +T + G NG GKSS+ A+ + YG GD Sbjct: 1 MLLNKLWMRNFKRFRD-QEIVFQDGITGIVGNNGTGKSSIVSAVLFALYGLQGTGLDGDY 59 Query: 87 IKKRSIKTPMPMC 99 I S P +C Sbjct: 60 IV-SSFAGPQDVC 71 >gi|145350307|ref|XP_001419553.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579785|gb|ABO97846.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1209 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E ++F D L + G NG GKS+L AI ++ Sbjct: 1 MHIKQVIVEGFKTYREQTVVDFDDGLNCIVGANGSGKSNLFHAIRFVL 48 >gi|325115837|emb|CBZ51392.1| putative structural maintenance of chromosome domain-containing protein [Neospora caninum Liverpool] Length = 1519 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 26/71 (36%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ I FR + I F+ + G NG GKS++ AI + Sbjct: 1 MYIKEVTIRGFRTYRHSTTIRFSPGYNCIVGTNGSGKSNVLLAIAFALGEGGHSSAERRM 60 Query: 87 IKKRSIKTPMP 97 + + +P Sbjct: 61 LLHEGVNERVP 71 >gi|22297672|ref|NP_680919.1| hypothetical protein tll0128 [Thermosynechococcus elongatus BP-1] gi|22293849|dbj|BAC07681.1| tll0128 [Thermosynechococcus elongatus BP-1] Length = 920 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+ + EF + ++ G+NG GK+SL EAI W+ + R +G Sbjct: 1 MEIQRLTLKNFKTHRDRT-FEFMPGVNVICGENGAGKTSLFEAIAWVLFD--ARSGYGSG 57 Query: 87 IKKRSIK 93 K I+ Sbjct: 58 FHKAIIR 64 >gi|326407512|gb|ADZ64583.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis CV56] Length = 358 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +FR + E K++F +L I GQN GK+++ EAI +L + R H Sbjct: 1 MKLKAIELKNFRNY-EELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKE 59 Query: 87 IKKRSIK 93 + S + Sbjct: 60 LISWSQQ 66 >gi|1107710|emb|CAA61549.1| recF [Lactococcus lactis] Length = 357 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +FR + E K++F +L I GQN GK+++ EAI +L + R H Sbjct: 1 MKLKAIELKNFRNY-EELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKE 59 Query: 87 IKKRSIK 93 + S + Sbjct: 60 LISWSQQ 66 >gi|15673957|ref|NP_268132.1| recombination protein F [Lactococcus lactis subsp. lactis Il1403] gi|281492578|ref|YP_003354558.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis KF147] gi|13959468|sp|Q9CE70|RECF_LACLA RecName: Full=DNA replication and repair protein recF gi|12725018|gb|AAK06073.1|AE006427_8 RecF protein [Lactococcus lactis subsp. lactis Il1403] gi|281376242|gb|ADA65733.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. lactis KF147] Length = 358 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +FR + E K++F +L I GQN GK+++ EAI +L + R H Sbjct: 1 MKLKAIELKNFRNY-EELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKE 59 Query: 87 IKKRSIK 93 + S + Sbjct: 60 LISWSQQ 66 >gi|159116977|ref|XP_001708709.1| Hypothetical protein, similar to SMC2 [Giardia lamblia ATCC 50803] gi|157436822|gb|EDO81035.1| hypothetical protein, similar to SMC2 [Giardia lamblia ATCC 50803] Length = 1576 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + +I F T + G NG GKS++ +AI ++ + R Sbjct: 1 MYIQEIILDGFKSYATQTRIGPFDPSFTAITGLNGTGKSNVLDAICFVLGISSLSRIRVT 60 Query: 86 SIKKRSIKT 94 S+ + K Sbjct: 61 SLTELIYKQ 69 >gi|315644210|ref|ZP_07897380.1| SMC-like protein [Paenibacillus vortex V453] gi|315280585|gb|EFU43874.1| SMC-like protein [Paenibacillus vortex V453] Length = 756 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKH 83 I +L I I +FRGF+ +F+ T++ G NG GK+S EA+E+ GY K Sbjct: 84 IKQLKKITIENFRGFSNQFFHDFSKPYTLIYGTNGSGKTSFCEALEYSLLGYISEAESKR 143 Query: 84 GDSIK 88 DS K Sbjct: 144 YDSNK 148 >gi|150866808|ref|XP_001386531.2| Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Scheffersomyces stipitis CBS 6054] gi|149388064|gb|ABN68502.2| Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Scheffersomyces stipitis CBS 6054] Length = 1240 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + KI F T + G NG GKS+L +AI ++ + + Sbjct: 3 RLIGLELHNFKSYRGTTKIGFGSSFFTSIIGPNGAGKSNLMDAISFVLGVRSS-HLRSQN 61 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 62 LKDLIYRGRR 71 >gi|261331644|emb|CBH14638.1| structural maintenance of chromosome 1, putative [Trypanosoma brucei gambiense DAL972] Length = 1275 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ ++ I T + G NG GKS+L +A+ ++ + G S Sbjct: 4 RIERVELFNFKSYSGHVTIGPLKDFTCIVGPNGSGKSNLMDALCFVLSSNSTATLRGGS 62 >gi|71745622|ref|XP_827441.1| structural maintenance of chromosome 1 [Trypanosoma brucei TREU927] gi|70831606|gb|EAN77111.1| structural maintenance of chromosome 1, putative [Trypanosoma brucei] Length = 1275 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ ++ I T + G NG GKS+L +A+ ++ + G S Sbjct: 4 RIERVELFNFKSYSGHVTIGPLKDFTCIVGPNGSGKSNLMDALCFVLSSNSTATLRGGS 62 >gi|324500227|gb|ADY40115.1| Structural maintenance of chromosomes protein 1A [Ascaris suum] Length = 1225 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ +F+ + I FAD T + G NG GKS+L +A+ ++ G ++ Sbjct: 3 RLLSLEVENFKSYKGKHVIGPFAD-FTAIVGPNGSGKSNLMDAVSFVL-GEDKKNLRVKK 60 Query: 87 IKKR 90 ++ Sbjct: 61 LQDL 64 >gi|261350818|ref|ZP_05976235.1| putative RecF/RecN/SMC N domain protein [Methanobrevibacter smithii DSM 2374] gi|288860436|gb|EFC92734.1| putative RecF/RecN/SMC N domain protein [Methanobrevibacter smithii DSM 2374] Length = 917 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + +++F+ + I+F D +T++ G+NG GKS++ EAI + + +K D ++ Sbjct: 4 TKLTLNNFKSYGHEV-IKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRN 62 Query: 90 RSIK 93 S + Sbjct: 63 GSDE 66 >gi|253741753|gb|EES98616.1| Hypothetical protein, similar to SMC2 [Giardia intestinalis ATCC 50581] Length = 1572 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + +I F T + G NG GKS++ +AI ++ + R Sbjct: 1 MYIQEIILDGFKSYATQTRIGPFDPSFTAITGLNGTGKSNVLDAICFVLGISSLSRIRVT 60 Query: 86 SIKKRSIKT 94 S+ K Sbjct: 61 SLTXLIYKQ 69 >gi|222444642|ref|ZP_03607157.1| hypothetical protein METSMIALI_00254 [Methanobrevibacter smithii DSM 2375] gi|222434207|gb|EEE41372.1| hypothetical protein METSMIALI_00254 [Methanobrevibacter smithii DSM 2375] Length = 917 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + +++F+ + I+F D +T++ G+NG GKS++ EAI + + +K D ++ Sbjct: 4 TKLTLNNFKSYGHEV-IKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRN 62 Query: 90 RSIK 93 S + Sbjct: 63 GSDE 66 >gi|148642180|ref|YP_001272693.1| purine NTPase involved in DNA repair, Rad50 [Methanobrevibacter smithii ATCC 35061] gi|148551197|gb|ABQ86325.1| purine NTPase involved in DNA repair, Rad50 [Methanobrevibacter smithii ATCC 35061] Length = 917 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + +++F+ + I+F D +T++ G+NG GKS++ EAI + + +K D ++ Sbjct: 4 TKLTLNNFKSYGHEV-IKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLVRN 62 Query: 90 RSIK 93 S + Sbjct: 63 GSDE 66 >gi|42740740|gb|AAS44544.1| structural maintenance of chromosome protein 4 [Trypanosoma cruzi] Length = 1215 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DIE+ +F+ + +I F T V G NG GKS++ +A+ ++F ++ Sbjct: 61 MVIRDIEVENFKSYAGKHRIGPFHKTFTAVIGPNGSGKSNVIDAMLFVFGRNAKK 115 >gi|303390903|ref|XP_003073682.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] gi|303302829|gb|ADM12322.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] Length = 1014 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 30/50 (60%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +F+ F + +EF +++ I+ G+NG GKSS+ AI ++ G Sbjct: 1 MHIKQIRLKNFKSFKDETLVEFTENVNIIVGRNGSGKSSIVSAIRFVLCG 50 >gi|316966287|gb|EFV50883.1| putative RecF/RecN/SMC N domain protein [Trichinella spiralis] Length = 1130 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ L IE+ F+ + + ++ F + + G NG GKS++ +AI ++ Sbjct: 23 IVMHLKRIELEGFKSYRQRTVLDNFNPNFNAITGLNGSGKSNILDAICFVLGITNLNHVR 82 Query: 84 GDSIKKRSIK 93 S++ Sbjct: 83 AASLQDLVSD 92 >gi|154281905|ref|XP_001541765.1| chromosome segregation protein sudA [Ajellomyces capsulatus NAm1] gi|150411944|gb|EDN07332.1| chromosome segregation protein sudA [Ajellomyces capsulatus NAm1] Length = 1267 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ + Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHMGREE 60 Query: 86 SIKKRSIKTPMPMCMAV 102 ++ P P+ + V Sbjct: 61 RQALLHVRKPKPIQLIV 77 >gi|308162307|gb|EFO64713.1| SMC multi domain protein [Giardia lamblia P15] Length = 1578 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + +I F T + G NG GKS++ +AI ++ + R Sbjct: 1 MYIQEIILDGFKSYATQTRIGPFDPSFTAITGLNGTGKSNVLDAICFVLGISSLSRIRVT 60 Query: 86 SIKKRSIKT 94 S+ + K Sbjct: 61 SLTELIYKQ 69 >gi|123504794|ref|XP_001328834.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121911782|gb|EAY16611.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1202 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I++ +F+ + ++ I F T + G NG GKS++ +A+ ++F GY R + + Sbjct: 10 IKSIQVENFKSYAGLKDIGPFHPSFTSIVGPNGSGKSNVIDAMLFVF-GYKARHMRQNVL 68 Query: 88 KKRSIKTPMPMCM 100 K K+ + Sbjct: 69 KDLIHKSTKYPNL 81 >gi|296166197|ref|ZP_06848638.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898445|gb|EFG78010.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 688 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL I + +FR F I +IEFA ++T++ G NG GK++L A W+ YG + Sbjct: 1 MKLHRIRLENFRQFQGISEIEFAQDKQQNVTLIWGANGAGKTTLLNAFTWVLYGQFTK 58 >gi|95928315|ref|ZP_01311063.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] gi|95135586|gb|EAT17237.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] Length = 814 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I + + + + + FA + +++G NG GKS++ EAI + +G + G Sbjct: 1 MQILSIHLKNIKSHRD-TTLNFAPGINVLSGPNGVGKSTVFEAIGYALFGVDAQSFVGKV 59 Query: 87 IKKRSIKTPM 96 + SI Sbjct: 60 ERFVSIGAKR 69 >gi|307595308|ref|YP_003901625.1| SMC domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550509|gb|ADN50574.1| SMC domain protein [Vulcanisaeta distributa DSM 14429] Length = 826 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 33/54 (61%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ ++ ++ I FRGF ++ F D + I++G G GK+S+ +AIE+ YG Sbjct: 2 RVKVRISELTIRDFRGFRGEHRVVFNDGINIIHGPVGSGKTSIVQAIEYALYGT 55 >gi|319940193|ref|ZP_08014546.1| DNA replication and repair protein recF [Streptococcus anginosus 1_2_62CV] gi|319810664|gb|EFW06994.1| DNA replication and repair protein recF [Streptococcus anginosus 1_2_62CV] Length = 365 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++I HFR + E +I+F L I GQN GK+++ EAI +L + R + Sbjct: 1 MWLKNLQIQHFRNY-EATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IKKRSIKT 94 + S T Sbjct: 60 LIYFSKDT 67 >gi|198421707|ref|XP_002129062.1| PREDICTED: similar to structural maintenance of chromosomes 1A [Ciona intestinalis] Length = 1225 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I F T + G NG GKS+L +AI ++ T Sbjct: 3 YLESIEVENFKSYRGKILIPFKK-FTAIIGPNGSGKSNLMDAISFVLGEKT 52 >gi|145344383|ref|XP_001416713.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576939|gb|ABO95006.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1225 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ IE+ +F+ + +I T V G NG GKS+L +AI ++ + + G + Sbjct: 10 RIDRIEVENFKSYKGKHQIGPFKSFTSVVGPNGSGKSNLMDAISFVLGVRSAQ-LRGTTF 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|119719441|ref|YP_919936.1| SMC domain-containing protein [Thermofilum pendens Hrk 5] gi|119524561|gb|ABL77933.1| SMC domain protein [Thermofilum pendens Hrk 5] Length = 784 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQRRKH 83 +E+ +R F + ++EF D +T++ G G GKSSL A+E+ YG Y +RR + Sbjct: 1 MEVEGYRFFKDPFRVEFGDGVTVIAGPVGSGKSSLLSAVEYALYGTDSYIERRVY 55 >gi|317120852|ref|YP_004100855.1| DNA replication and repair protein RecF [Thermaerobacter marianensis DSM 12885] gi|315590832|gb|ADU50128.1| DNA replication and repair protein RecF [Thermaerobacter marianensis DSM 12885] Length = 400 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E +E LT++ G NG GK++L EAI + G + R Sbjct: 1 MVIRRVVLRQFRSY-ERATLELEPGLTLLVGPNGIGKTNLLEAIHFAATGRSPRTSRDAD 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRNG 64 >gi|50287267|ref|XP_446063.1| hypothetical protein [Candida glabrata CBS 138] gi|49525370|emb|CAG58987.1| unnamed protein product [Candida glabrata] Length = 1223 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+ +E+ +F+ + ++F D + T + G NG GKS+L +AI ++ Sbjct: 3 RLVGLELYNFKSYKGTVNVDFGDSNFTSIIGPNGSGKSNLMDAISFVLG 51 >gi|189202178|ref|XP_001937425.1| structural maintenance of chromosomes protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984524|gb|EDU50012.1| structural maintenance of chromosomes protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1295 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +EI +F+ + + F D T + G NG GKS+ +AI ++ + + Sbjct: 3 KLVRLEIYNFKSYRGRHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGVRSS-HLRSEK 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDMVYR 68 >gi|170590714|ref|XP_001900116.1| SMC proteins Flexible Hinge Domain containing protein [Brugia malayi] gi|158592266|gb|EDP30866.1| SMC proteins Flexible Hinge Domain containing protein [Brugia malayi] Length = 1208 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ IEI F+ + + Q I+ F + G NG GKS++ +AI ++ + Sbjct: 5 MRIKRIEIDGFKSYAQRQIIDGFDAQFNAITGLNGSGKSNILDAICFVLGISNLSQVRAA 64 Query: 86 SIKKRSIKT 94 + K Sbjct: 65 QLSDLVYKQ 73 >gi|123501445|ref|XP_001328078.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121911016|gb|EAY15855.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1177 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + +F+ + Q + F + LT + G NG GKS+L +A+ ++F G+ +R + Sbjct: 7 VTQIVLENFKSYYGRQIVGPFNNQLTCIVGPNGSGKSNLIDALLFVF-GFRAKRMRHSKL 65 Query: 88 KKRSIKTPMPMCMAVPR 104 P ++ R Sbjct: 66 TGLIYNGPDHPNISYAR 82 >gi|207345681|gb|EDZ72426.1| YFL008Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1225 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|225848784|ref|YP_002728948.1| chromosome segregation protein SMC [Sulfurihydrogenibium azorense Az-Fu1] gi|225644251|gb|ACN99301.1| chromosome segregation protein SMC [Sulfurihydrogenibium azorense Az-Fu1] Length = 1171 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I + F+ + E I + T + G NG GKS+L +AI + + + Sbjct: 5 YIDRINVFGFKSYGERYLSIPLGEGFTAIVGPNGSGKSNLGDAIVFCLGIASAKAMR 61 >gi|238613454|ref|XP_002398446.1| hypothetical protein MPER_00958 [Moniliophthora perniciosa FA553] gi|215474997|gb|EEB99376.1| hypothetical protein MPER_00958 [Moniliophthora perniciosa FA553] Length = 130 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ IE+ F+ + Q I + T V G NG GKS+L +AI ++ + + Sbjct: 1 MPLVRIEVCDFKSYRGHQTIGPFKNFTSVIGPNGAGKSNLMDAISFVLGVKSAQ-LRSSQ 59 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 60 LKDLVYRGRK 69 >gi|190406566|gb|EDV09833.1| structural maintenance of chromosome 1 [Saccharomyces cerevisiae RM11-1a] Length = 1225 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|19074170|ref|NP_584776.1| CHROMOSOME SEGREGATION PROTEIN [Encephalitozoon cuniculi GB-M1] gi|19068812|emb|CAD25280.1| CHROMOSOME SEGREGATION PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 1162 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 7/80 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-------GYTQ 79 L IE+ +F+ + + I D T + G NG GKS++ +A+ + G + Sbjct: 1 MGLERIEVENFKSYLGVHVIGPFDRFTCIVGPNGSGKSNVMDAVMFCLGVGSRYLRGSSA 60 Query: 80 RRKHGDSIKKRSIKTPMPMC 99 R S+ + C Sbjct: 61 RSLINSKCNHCSVTLYIEGC 80 >gi|315221608|ref|ZP_07863528.1| recombination protein F [Streptococcus anginosus F0211] gi|315189442|gb|EFU23137.1| recombination protein F [Streptococcus anginosus F0211] Length = 365 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E +I+F L I GQN GK+++ EAI +L + R + Sbjct: 1 MWLKKLQIQHFRNY-EATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IKKRSIKT 94 + S T Sbjct: 60 LIYFSKDT 67 >gi|331235125|ref|XP_003330223.1| hypothetical protein PGTG_11133 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309213|gb|EFP85804.1| hypothetical protein PGTG_11133 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1239 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +F+ + +Q I H T V G NG GKS+L +AI ++ + + Sbjct: 1 MPLHSVEVDNFKSYKGVQTIGPFKHFTAVIGPNGAGKSNLMDAISFVLGVRSAQ-LRSTQ 59 Query: 87 IKKRSIK 93 +K K Sbjct: 60 LKDLIYK 66 >gi|308460860|ref|XP_003092729.1| CRE-DPY-27 protein [Caenorhabditis remanei] gi|308252566|gb|EFO96518.1| CRE-DPY-27 protein [Caenorhabditis remanei] Length = 1568 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 R++I K DI + +F+ + +I F +LT++ G NG GKS++ +AI ++F Q+ Sbjct: 106 RRMIIK--DIYVDNFKSYRGRHQIGPFHKNLTMILGPNGSGKSNVIDAILFVFGFRAQK 162 >gi|14318514|ref|NP_116647.1| Smc1p [Saccharomyces cerevisiae S288c] gi|417778|sp|P32908|SMC1_YEAST RecName: Full=Structural maintenance of chromosomes protein 1; AltName: Full=DA-box protein SMC1 gi|172621|gb|AAA16595.1| chromosome segregation protein [Saccharomyces cerevisiae] gi|836746|dbj|BAA09230.1| chromosome segregation protein SMC1 [Saccharomyces cerevisiae] gi|285811887|tpg|DAA12432.1| TPA: Smc1p [Saccharomyces cerevisiae S288c] gi|740138|prf||2004373A head rod tail protein Length = 1225 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|256268869|gb|EEU04220.1| Smc1p [Saccharomyces cerevisiae JAY291] Length = 1225 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|229172488|ref|ZP_04300047.1| SMC protein-like protein [Bacillus cereus MM3] gi|228610959|gb|EEK68222.1| SMC protein-like protein [Bacillus cereus MM3] Length = 1041 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ IE+ FR + E Q +F + +L ++ NG+GK+SL +AIEW R Sbjct: 3 IKIKRIELGAFRAYEEKQTFDFINSKGQIANLVVIFAPNGFGKTSLLDAIEWGLTKEIHR 62 Query: 81 RKHGDSIKKRSIK 93 + + +KK + K Sbjct: 63 FANNEVLKKVTKK 75 >gi|330936886|ref|XP_003305520.1| hypothetical protein PTT_18385 [Pyrenophora teres f. teres 0-1] gi|311317414|gb|EFQ86377.1| hypothetical protein PTT_18385 [Pyrenophora teres f. teres 0-1] Length = 1287 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +EI +F+ + + F D T + G NG GKS+ +AI ++ + + Sbjct: 3 KLVRLEIYNFKSYRGRHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGVRSS-HLRSEK 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDMVYR 68 >gi|151940755|gb|EDN59142.1| stability of minichromosomes [Saccharomyces cerevisiae YJM789] Length = 1225 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+S+F+ + + K+ F + + T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVL-GVRSNHLRSNI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|312134085|ref|YP_004001423.1| DNA replication and repair protein recf [Caldicellulosiruptor owensensis OL] gi|311774136|gb|ADQ03623.1| DNA replication and repair protein RecF [Caldicellulosiruptor owensensis OL] Length = 353 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I I +FR + + EF D + ++ G N GK+SL EA+ + G + + + D I Sbjct: 3 IKGIYIENFRSY-KQSFFEFKDKINLIVGNNASGKTSLLEALYFCMCGKSFKSRDIDLIN 61 Query: 89 KRSIKTPMPMCMAVPRCKY 107 S + M V +Y Sbjct: 62 FDSQYFKLEMVAEVEGVEY 80 >gi|195455807|ref|XP_002074875.1| GK23290 [Drosophila willistoni] gi|194170960|gb|EDW85861.1| GK23290 [Drosophila willistoni] Length = 1180 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +IE F T + G NG GKS++ +AI ++ + Sbjct: 1 MYVKKLILDGFKSYGKRTEIEGFDREFTAITGLNGSGKSNILDAICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|42783642|ref|NP_980889.1| hypothetical protein BCE_4596 [Bacillus cereus ATCC 10987] gi|42739571|gb|AAS43497.1| hypothetical protein BCE_4596 [Bacillus cereus ATCC 10987] Length = 879 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 F + ++ + +FRG+ + F + + +++G NGYGK++L +AIEW G +R Sbjct: 6 FFISEVNMENFRGYKSQKVKFFEEQSDKTGVVLISGPNGYGKTTLLDAIEWCLTGTVKRL 65 Query: 82 KHGDSIK 88 + +I+ Sbjct: 66 EREYNIR 72 >gi|225871678|ref|YP_002753036.1| RecF/RecN/SMC N domain protein [Bacillus cereus 03BB102] gi|225785565|gb|ACO25783.1| RecF/RecN/SMC N domain protein [Bacillus cereus 03BB102] Length = 688 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR F ++F + ++ G N GK+++ +A+E LF +R D Sbjct: 1 MYISRLTLKNFRTFKNETTVQFHEGTNVIVGHNNAGKTTIIKALELLFDANKSKRLSIDD 60 Query: 87 IKK 89 K Sbjct: 61 FNK 63 >gi|154345017|ref|XP_001568450.1| structural maintenance of chromosome (SMC) family protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065787|emb|CAM43561.1| putative structural maintenance of chromosome (SMC) family protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1322 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ K+ +E+ +F+ + I F D T + G NG GKS+L +A+ ++ + Sbjct: 1 MLSKIHRVELENFKSYYGKGVIGPFKD-FTCIVGPNGAGKSNLMDALSFVL-SSSVTPAR 58 Query: 84 GDSIK 88 S++ Sbjct: 59 ASSMR 63 >gi|39996824|ref|NP_952775.1| nuclease SbcCD subunit C [Geobacter sulfurreducens PCA] gi|39983712|gb|AAR35102.1| nuclease SbcCD, C subunit, putative [Geobacter sulfurreducens PCA] gi|298505833|gb|ADI84556.1| DNA repair exonuclease SbcCD, C subunit, putative [Geobacter sulfurreducens KN400] Length = 813 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I + + + + ++ F+ + +++G NG GKS++ EAI + +G R + Sbjct: 1 MRILSIHLKNIKSHRD-TELTFSAGINVLSGPNGVGKSTVFEAIGYALFGVDARDFVSNV 59 Query: 87 IKKRSIKTPM 96 + SI T Sbjct: 60 DRFLSIGTKK 69 >gi|256838545|ref|ZP_05544055.1| SMC domain-containing protein [Parabacteroides sp. D13] gi|256739464|gb|EEU52788.1| SMC domain-containing protein [Parabacteroides sp. D13] Length = 693 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Y+ ++ + +I+IS+FR F + + F + + ++ G N GKS+L AI + Sbjct: 6 YFGKEYNMYIKEIKISNFRNFRD-ASVPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYSDG 64 Query: 80 RRK------HGDSIKKRSIKTPM 96 RR + + ++P Sbjct: 65 RRLGTCDLFYETDVVTLQQQSPR 87 >gi|255710583|ref|XP_002551575.1| KLTH0A02706p [Lachancea thermotolerans] gi|238932952|emb|CAR21133.1| KLTH0A02706p [Lachancea thermotolerans] Length = 1228 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +LL IE+ +F+ + I F + + T V G NG GKS+L +AI ++ + Sbjct: 3 RLLGIELYNFKSYKGKVSIGFGESNFTSVIGPNGSGKSNLMDAISFVLGMKSI 55 >gi|303274994|ref|XP_003056807.1| condensin complex component [Micromonas pusilla CCMP1545] gi|226461159|gb|EEH58452.1| condensin complex component [Micromonas pusilla CCMP1545] Length = 1262 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E +EF HL + G NG GKS+L AI ++ Sbjct: 1 MHIKQVVVEGFKTYREQTVVEFEPHLNCIVGANGSGKSNLFHAIRFVL 48 >gi|289548463|ref|YP_003473451.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484] gi|289182080|gb|ADC89324.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484] Length = 1165 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + F+ + +I + T + G NG GKS++ +AI + T R + Sbjct: 7 YIEKIVVEGFKSYGMNRLEIPLGEGFTAIVGPNGSGKSNIGDAISFALGIATARMLRAKN 66 Query: 87 I 87 + Sbjct: 67 L 67 >gi|161528753|ref|YP_001582579.1| SMC domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340054|gb|ABX13141.1| SMC domain protein [Nitrosopumilus maritimus SCM1] Length = 693 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F ++ K+EF + +T+ G NG GKSS+ +AI + +G R+ + IK Sbjct: 2 ITSIELGDFLAHSD-TKLEFDNGVTVFVGHNGAGKSSIIDAITFALFGQHTRKSNKGLIK 60 Query: 89 KRSIKTPMPMCMAV 102 + + + + +V Sbjct: 61 RGANQGYSKVNFSV 74 >gi|315427572|dbj|BAJ49171.1| chromosome segregation protein SMC [Candidatus Caldiarchaeum subterraneum] Length = 1119 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 34 ISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 I+ F+ F I+ L ++ G NG GKS++ +A+++ + D K Sbjct: 3 ITGFKSFGNKRTVIKLPPGLVVITGPNGGGKSTVLDAVKFALGELSAHNLRVDRFSKLLH 62 Query: 93 KTPM 96 ++ Sbjct: 63 ESSK 66 >gi|315425670|dbj|BAJ47328.1| chromosome segregation protein SMC [Candidatus Caldiarchaeum subterraneum] Length = 1119 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 34 ISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 I+ F+ F I+ L ++ G NG GKS++ +A+++ + D K Sbjct: 3 ITGFKSFGNKRTVIKLPPGLVVITGPNGGGKSTVLDAVKFALGELSAHNLRVDRFSKLLH 62 Query: 93 KTPM 96 ++ Sbjct: 63 ESSK 66 >gi|42518088|ref|NP_964018.1| recombination protein F [Lactobacillus johnsonii NCC 533] gi|51316301|sp|Q74M31|RECF_LACJO RecName: Full=DNA replication and repair protein recF gi|41582372|gb|AAS07984.1| DNA replication and repair protein RecF [Lactobacillus johnsonii NCC 533] gi|329666395|gb|AEB92343.1| recombination protein F [Lactobacillus johnsonii DPC 6026] Length = 374 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E KI F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNF-EELKINFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|237756087|ref|ZP_04584664.1| chromosome segregation protein SMC [Sulfurihydrogenibium yellowstonense SS-5] gi|237691759|gb|EEP60790.1| chromosome segregation protein SMC [Sulfurihydrogenibium yellowstonense SS-5] Length = 1172 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + I + F+ + + I T + G NG GKS++ ++I + + R Sbjct: 4 YIDRINVYGFKSYGDRHLTIPLGPGFTAIVGPNGAGKSNIGDSIVFCLGIASARAMRALK 63 Query: 85 -DSIKKRSIKTPMP 97 + S P Sbjct: 64 LTDLIFSSKDKSAP 77 >gi|150402566|ref|YP_001329860.1| chromosome segregation protein SMC [Methanococcus maripaludis C7] gi|150033596|gb|ABR65709.1| chromosome segregation protein SMC [Methanococcus maripaludis C7] Length = 1189 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 4 LSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|27227801|emb|CAD59409.1| SMC1 protein [Oryza sativa] Length = 1264 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ + G Sbjct: 15 RIHRLEVENFKSYKGTQTIGPFFD-FTAIIGPNGAGKSNLMDAISFVLGVRSA-HLRGAQ 72 Query: 87 IKKR 90 +K Sbjct: 73 LKDL 76 >gi|330998402|ref|ZP_08322226.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] gi|329568508|gb|EGG50313.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] Length = 717 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ I+I +F+ + EIQ +EF+D L ++ G G GKS L A W+ +G Sbjct: 1 MRIRKIKIENFQSYYEIQTLEFSDGLNLIIGNGGKGKSKLFNAFYWVLFG 50 >gi|268318565|ref|YP_003292221.1| DNA replication and repair protein RecF [Lactobacillus johnsonii FI9785] gi|262396940|emb|CAX65954.1| DNA replication and repair protein RecF [Lactobacillus johnsonii FI9785] Length = 374 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E KI F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNF-EELKINFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|229029528|ref|ZP_04185609.1| hypothetical protein bcere0028_16180 [Bacillus cereus AH1271] gi|228731810|gb|EEL82711.1| hypothetical protein bcere0028_16180 [Bacillus cereus AH1271] Length = 1040 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ IE+ FR + E Q +F + +L ++ NG+GK+SL +AIEW R Sbjct: 3 IKIKRIELGAFRAYEENQTFDFINSKGQIANLVVIFAPNGFGKTSLLDAIEWGLTKEIHR 62 Query: 81 RKHGDSIKKRSIK 93 + + +KK + K Sbjct: 63 FANNEVLKKVTKK 75 >gi|45358960|ref|NP_988517.1| structural maintenance of chromosome protein [Methanococcus maripaludis S2] gi|45047826|emb|CAF30953.1| structural maintenance of chromosome protein [Methanococcus maripaludis S2] Length = 1189 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 4 LSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|227889154|ref|ZP_04006959.1| recombination protein F [Lactobacillus johnsonii ATCC 33200] gi|227850383|gb|EEJ60469.1| recombination protein F [Lactobacillus johnsonii ATCC 33200] Length = 374 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E KI F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNF-EELKINFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|219112113|ref|XP_002177808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410693|gb|EEC50622.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1237 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ +F+ + +Q I T V G NG GKS+L +A+ ++ + R Sbjct: 1 MPVTSLELENFKSYAGLQTIGPFRDFTSVIGPNGAGKSNLMDAVSFVLGVQS-RDLRSTV 59 Query: 87 IKKRSIKTP 95 + + P Sbjct: 60 LADLVFRPP 68 >gi|188996121|ref|YP_001930372.1| chromosome segregation protein SMC [Sulfurihydrogenibium sp. YO3AOP1] gi|188931188|gb|ACD65818.1| chromosome segregation protein SMC [Sulfurihydrogenibium sp. YO3AOP1] Length = 1172 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + I + F+ + + I T + G NG GKS++ ++I + + R Sbjct: 4 YIDRINVYGFKSYGDRHLTIPLGPGFTAIVGPNGAGKSNIGDSIVFCLGIASARAMRALK 63 Query: 85 -DSIKKRSIKTPMP 97 + S P Sbjct: 64 LTDLIFSSNDKSAP 77 >gi|18313677|ref|NP_560344.1| purine NTPase [Pyrobaculum aerophilum str. IM2] gi|18161228|gb|AAL64526.1| purine NTPase, probable [Pyrobaculum aerophilum str. IM2] Length = 702 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---- 84 + IE+ +F+ +F D + + G NG GK+S+ EAI +G RK G Sbjct: 2 IRRIELLNFKAHG-KASFKFGDGVNFIYGPNGSGKTSIMEAISVALFGSQWVRKVGGKWA 60 Query: 85 DSIKKRSIKTPMPMCMA 101 D +++ + + + M+ Sbjct: 61 DYLRRGATSGEVKLYMS 77 >gi|86607139|ref|YP_475902.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555681|gb|ABD00639.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. JA-3-3Ab] Length = 1198 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++L + + +F+ E EF + + G+NG GK+S+ EAI W+ + Y Sbjct: 1 MRILSLALQNFKSH-EDAFFEFEPGINAICGENGAGKTSILEAIAWVLFDY 50 >gi|116512900|ref|YP_811807.1| recombination protein F [Lactococcus lactis subsp. cremoris SK11] gi|123025165|sp|Q02WH8|RECF_LACLS RecName: Full=DNA replication and repair protein recF gi|116108554|gb|ABJ73694.1| DNA replication and repair protein RecF [Lactococcus lactis subsp. cremoris SK11] Length = 359 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +FR + ++ K++F +L I GQN GK+++ EAI +L + R H Sbjct: 1 MKLKQIELKNFRNYEDL-KLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|222617555|gb|EEE53687.1| hypothetical protein OsJ_37035 [Oryza sativa Japonica Group] Length = 1221 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ + G Sbjct: 15 RIHRLEVENFKSYKGTQTIGPFFD-FTAIIGPNGAGKSNLMDAISFVLGVRSA-HLRGAQ 72 Query: 87 IKKR 90 +K Sbjct: 73 LKDL 76 >gi|218187327|gb|EEC69754.1| hypothetical protein OsI_39293 [Oryza sativa Indica Group] Length = 1246 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ + G Sbjct: 15 RIHRLEVENFKSYKGTQTIGPFFD-FTAIIGPNGAGKSNLMDAISFVLGVRSA-HLRGAQ 72 Query: 87 IKKR 90 +K Sbjct: 73 LKDL 76 >gi|11498637|ref|NP_069865.1| chromosome segregation protein [Archaeoglobus fulgidus DSM 4304] gi|18201999|sp|O29230|RAD50_ARCFU RecName: Full=DNA double-strand break repair rad50 ATPase gi|2649562|gb|AAB90211.1| purine NTPase, putative [Archaeoglobus fulgidus DSM 4304] Length = 886 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +++I +FR ++ KIEF + ++ G+NG GKSS+ EAI FYG + Sbjct: 1 MILLKELQIKNFRSHSD-SKIEFDTGINLIAGRNGAGKSSILEAILVAFYGLKPATLRKN 59 Query: 86 SIKK 89 + + Sbjct: 60 DLVR 63 >gi|108863044|gb|ABA99633.2| RecF/RecN/SMC N terminal domain containing protein, expressed [Oryza sativa Japonica Group] Length = 573 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ + G Sbjct: 15 RIHRLEVENFKSYKGTQTIGPFFD-FTAIIGPNGAGKSNLMDAISFVLGVRSA-HLRGAQ 72 Query: 87 IKKR 90 +K Sbjct: 73 LKDL 76 >gi|254425299|ref|ZP_05039017.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] gi|196192788|gb|EDX87752.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] Length = 1007 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +++ +F + E+ ++F H+ V G NG GKSSL EAI W +G ++ D ++ Sbjct: 9 KQLKLQNFLSYQEVV-LDFAGLHVACVCGPNGAGKSSLLEAIAWCIWGQSRVSAEDDIVR 67 Query: 89 KRSIKTPMPMC 99 + S++ + C Sbjct: 68 QGSLEAQVSFC 78 >gi|302679988|ref|XP_003029676.1| hypothetical protein SCHCODRAFT_82895 [Schizophyllum commune H4-8] gi|300103366|gb|EFI94773.1| hypothetical protein SCHCODRAFT_82895 [Schizophyllum commune H4-8] Length = 1249 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ IE+ F+ + Q I + T V G NG GKS+L +AI ++ + + Sbjct: 1 MPLIQIEVCDFKSYRGHQTIGPFKNFTSVIGPNGAGKSNLMDAISFVLGVKSAQ-LRSSQ 59 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 60 LKDLVYRGRR 69 >gi|325680938|ref|ZP_08160475.1| putative DNA sulfur modification protein DndD [Ruminococcus albus 8] gi|324107402|gb|EGC01681.1| putative DNA sulfur modification protein DndD [Ruminococcus albus 8] Length = 676 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I + +FR F E + F+ ++TI+ G NG GK+S ++A W YG T Sbjct: 1 MYFKQITLQNFRQFKEKTTVTFSTDHVKNVTIIMGDNGTGKTSFAQAFTWCLYGRTD--F 58 Query: 83 HGDSIKKRSIKTPM 96 I +S K M Sbjct: 59 KDQDIFSKSKKAEM 72 >gi|237797328|ref|ZP_04585789.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020178|gb|EGI00235.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 1011 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L I +S+ R F KIE + TI+ NG GK+++ EA+E+ G R Sbjct: 3 QLKSITLSNIRRFGAETKIELSRGATILLAPNGTGKTAIFEAVEFALTGKISR 55 >gi|145591215|ref|YP_001153217.1| SMC domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282983|gb|ABP50565.1| SMC domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 702 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---- 84 + +E+ +F+ F + + + G NG GK+SL EAI +G T RK G Sbjct: 2 IRRVELINFKAHA-KAAFRFGEGVNFIYGPNGSGKTSLMEAISVALFGSTWVRKVGSKWS 60 Query: 85 DSIKKRSIKTPMPMCMA 101 D +++ S + + ++ Sbjct: 61 DYLRRGSTAGEVRLYLS 77 >gi|126699476|ref|YP_001088373.1| putative conjugative transposon DNA recombination protein [Clostridium difficile 630] gi|115250913|emb|CAJ68739.1| putative DNA recombination protein Tn1549-like,CTn5-Orf24 [Clostridium difficile] Length = 540 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 + ++I +F+ F++ ++F + + I+ G NG GKS++ EAI + G + + Sbjct: 1 MSIRKLKIKNFKCFSDWFTVDFENGINILVGNNGTGKSTILEAINLVLTGTYHGKNIRNE 60 >gi|134045227|ref|YP_001096713.1| condensin subunit Smc [Methanococcus maripaludis C5] gi|132662852|gb|ABO34498.1| condensin subunit Smc [Methanococcus maripaludis C5] Length = 1189 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 4 LSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|159905659|ref|YP_001549321.1| chromosome segregation protein SMC [Methanococcus maripaludis C6] gi|159887152|gb|ABX02089.1| chromosome segregation protein SMC [Methanococcus maripaludis C6] Length = 1189 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ D T + G NG GKS+ + I ++ + + Sbjct: 4 LSEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|301055832|ref|YP_003794043.1| hypothetical protein BACI_c43090 [Bacillus anthracis CI] gi|300378001|gb|ADK06905.1| hypothetical protein BACI_c43090 [Bacillus cereus biovar anthracis str. CI] Length = 1001 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ I I FR F + + +F + + I++G NG GKS++ ++I+W G R + D Sbjct: 1 MKIQKIIIKDFRIFNGMYEFDFKNKDVIIISGPNGNGKSTIFDSIQWCLTGKIPRYEGSD 60 Query: 86 SIKKRSI 92 +K + Sbjct: 61 EWRKFNY 67 >gi|261338544|ref|ZP_05966428.1| RecF protein [Bifidobacterium gallicum DSM 20093] gi|270276565|gb|EFA22419.1| RecF protein [Bifidobacterium gallicum DSM 20093] Length = 381 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + HFR + E+ ++F +T++ G NG GK++L EAIE L G + R Sbjct: 1 MRITRLALDHFRSWNEVV-LDFPSGITMLQGHNGLGKTNLVEAIEVLSTGSSHRTSSSLP 59 Query: 87 IKKRSIKT 94 + +R +T Sbjct: 60 LVQRGQQT 67 >gi|152992321|ref|YP_001358042.1| DNA double-strand break repair protein [Sulfurovum sp. NBC37-1] gi|151424182|dbj|BAF71685.1| DNA double-strand break repair protein [Sulfurovum sp. NBC37-1] Length = 788 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ + + ++FA+ LT + G+NG GKS++ +AI + YG R ++I+ Sbjct: 3 LTSLHMQNYKKYRDF-SLDFAEGLTGIIGRNGSGKSTIFDAITFALYGDV--RGEKETIR 59 Query: 89 KRSIKTPMPMCMAV 102 P+ + + Sbjct: 60 YAKADVKEPVKVTL 73 >gi|307353185|ref|YP_003894236.1| SMC domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156418|gb|ADN35798.1| SMC domain protein [Methanoplanus petrolearius DSM 11571] Length = 931 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IE +F+ +++ I F D +T + G NG GKS++ + I + YG GD I Sbjct: 3 LERIEFKNFKRYSDET-INFNDGITGIIGNNGSGKSTIVQGILFALYGVRA-GIEGDFIN 60 Query: 89 KRSIKTP 95 + Sbjct: 61 SSGSNSK 67 >gi|195027327|ref|XP_001986535.1| GH20475 [Drosophila grimshawi] gi|193902535|gb|EDW01402.1| GH20475 [Drosophila grimshawi] Length = 1176 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +I+ F T + G NG GKS++ +++ ++ + Sbjct: 1 MYVKKLVLDGFKSYGKRTEIDGFDPEFTAITGLNGSGKSNILDSVCFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|146295088|ref|YP_001178859.1| DNA replication and repair protein RecF [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408664|gb|ABP65668.1| DNA replication and repair protein RecF [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 349 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +FR E EF D + ++ G+N GK++L EAI + G + + K + I Sbjct: 3 IKSIYLENFRNHNERF-FEFKDGINLILGKNASGKTNLLEAIYFCLCGKSFKSKDTNLIS 61 Query: 89 KRSIKTPMPMCMAVPRCKY 107 S + + +Y Sbjct: 62 FDSEYFKLEASVLANDVEY 80 >gi|302817360|ref|XP_002990356.1| hypothetical protein SELMODRAFT_428807 [Selaginella moellendorffii] gi|300141918|gb|EFJ08625.1| hypothetical protein SELMODRAFT_428807 [Selaginella moellendorffii] Length = 1205 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ IE+ +F+ + Q I + T + G NG GKS+L +AI ++ + + G + Sbjct: 9 KIHRIEVENFKSYKGHQVIGPFKNFTAIIGPNGAGKSNLMDAISFVLGVRSMQ-LRGAQL 67 Query: 88 KKR 90 K Sbjct: 68 KDL 70 >gi|255513351|gb|EET89617.1| SMC domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 1133 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + I +F+ F I F+ + G NG GKS++ ++I + F + +R Sbjct: 1 MLYVDKVIIHNFKSFRHSV-IRFSRGFNCIIGPNGSGKSNIFDSILFGFGESSLKRIRAH 59 Query: 86 SIKKRSIK 93 + + Sbjct: 60 ATTDLISR 67 >gi|116754465|ref|YP_843583.1| chromosome segregation protein SMC [Methanosaeta thermophila PT] gi|116665916|gb|ABK14943.1| condensin subunit Smc [Methanosaeta thermophila PT] Length = 1171 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IE+ +F+ F ++ +V G NG GKS++ +A+ + + R + Sbjct: 1 MHIKEIELRNFKSFGRRALVQLKKDFIVVTGPNGSGKSNIIDALLFSLCLTSSRAMRAER 60 Query: 87 IKKRSIK 93 + + Sbjct: 61 LPDLIYR 67 >gi|330895391|gb|EGH27729.1| SMC domain-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 640 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I +S+ R F IE + TI+ NG GK+++ EAIE+ G R D Sbjct: 3 KLNSITLSNLRKFGADVTIELSPGATILLAPNGTGKTTVFEAIEFGLTGKVA-RLRDD 59 >gi|297621405|ref|YP_003709542.1| putative DNA replication and repair protein recF [Waddlia chondrophila WSU 86-1044] gi|297376706|gb|ADI38536.1| putative DNA replication and repair protein recF [Waddlia chondrophila WSU 86-1044] Length = 346 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +FR + E + F ++ G N GK+++ EAI L G + R ++ D Sbjct: 1 MQVKALLLRNFRSY-EKAQFTFGPQNNLIIGPNARGKTTILEAIYLLITGRSFRSRNLDE 59 Query: 87 IKKRS 91 + + Sbjct: 60 MVREG 64 >gi|19703785|ref|NP_603347.1| ABC transporter ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713927|gb|AAL94646.1| ABC transporter ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 671 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L I + +FR F ++ KI F ++T++ G NG GK++L+ AI W YG Sbjct: 1 MQLKSINLMNFRQFKDL-KISFPSSNDGKNVTLIFGDNGSGKTTLANAIIWCLYGQIDFE 59 Query: 82 KHGDSIKKRSIKTP 95 K KTP Sbjct: 60 KKELYNIHMKQKTP 73 >gi|324500969|gb|ADY40438.1| Structural maintenance of chromosomes protein 1A [Ascaris suum] Length = 1236 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKH 83 +L +E+ +F+ + Q I T + G NG GKS++ +AI ++ +R + Sbjct: 3 RLHTLELENFKSYKGKQIIGPFKQFTAIIGPNGSGKSNMMDAICFVLGEKASNLRVKRLN 62 Query: 84 G 84 Sbjct: 63 D 63 >gi|222528364|ref|YP_002572246.1| SMC domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455211|gb|ACM59473.1| SMC domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 427 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I IS F+ E IEF +T + G NGYGKS+L +A+E+ Y Sbjct: 1 MEILKITISGFKNI-ENTTIEFNHPITAIVGPNGYGKSNLLQALEFGNYFIKSDEIEKSF 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQLK 110 KR P+ M Y+++ Sbjct: 60 FMKRPSFIPINKNMINSEFHYEIE 83 >gi|255582489|ref|XP_002532030.1| Structural maintenance of chromosome 1 protein, putative [Ricinus communis] gi|223528300|gb|EEF30346.1| Structural maintenance of chromosome 1 protein, putative [Ricinus communis] Length = 1220 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +EI +F+ + Q I T + G NG GKS+L +AI ++ T + G + Sbjct: 9 KILKLEIENFKSYKGQQTIGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGAQL 67 Query: 88 KKR 90 K Sbjct: 68 KDL 70 >gi|321251833|ref|XP_003192194.1| cohesin complex subunit and chromosome segregation protein [Cryptococcus gattii WM276] gi|317458662|gb|ADV20407.1| Cohesin complex subunit and chromosome segregation protein, putative [Cryptococcus gattii WM276] Length = 1214 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +E+ F+ + Q I F D V G NG GKS+L +AI ++ + + Sbjct: 1 MPLQRLELYDFKSYRGKQVIYFGDAPFVSVIGPNGAGKSNLMDAISFVLGVKSAQ-LRST 59 Query: 86 SIKKRSIKTPM 96 +K + Sbjct: 60 QLKDLIYRGRR 70 >gi|46199226|ref|YP_004893.1| hypothetical protein TTC0922 [Thermus thermophilus HB27] gi|46196851|gb|AAS81266.1| hypothetical protein TT_C0922 [Thermus thermophilus HB27] Length = 966 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +E+ F + E Q ++F+D L + G G GKS+L +AI + YG R Sbjct: 1 MRPLRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVPRVGR 58 >gi|55981257|ref|YP_144554.1| exonuclease SbcC [Thermus thermophilus HB8] gi|55772670|dbj|BAD71111.1| exonuclease SbcC [Thermus thermophilus HB8] Length = 966 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +E+ F + E Q ++F+D L + G G GKS+L +AI + YG R Sbjct: 1 MRPLRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVPRVGR 58 >gi|164660398|ref|XP_001731322.1| hypothetical protein MGL_1505 [Malassezia globosa CBS 7966] gi|159105222|gb|EDP44108.1| hypothetical protein MGL_1505 [Malassezia globosa CBS 7966] Length = 957 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + + F + G NG GKS++ +AI ++ Sbjct: 1 MRIEELIIDGFKSYPVRTHVRGFDPSFNAITGLNGSGKSNILDAICFVLGLTNLSSVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NMQDLIYK 68 >gi|322495597|emb|CBZ30902.1| putative structural maintenance of chromosome (SMC) family protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1322 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQ 79 ++ K+ +E+ +F+ + I F D T + G NG GKS+L +A+ ++ + Sbjct: 1 MLSKIHRVELDNFKSYYGKAVIGPFKD-FTCIVGPNGAGKSNLMDALSFVLSNTVTQASA 59 Query: 80 RRKHGDS 86 G S Sbjct: 60 SSMRGKS 66 >gi|168029501|ref|XP_001767264.1| condensin complex component SMC1 [Physcomitrella patens subsp. patens] gi|162681519|gb|EDQ67945.1| condensin complex component SMC1 [Physcomitrella patens subsp. patens] Length = 1247 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EI +F+ + Q + + T + G NG GKS+L +AI ++ + + G + Sbjct: 9 RIERLEIENFKSYKGHQIVGPFKNFTAIIGPNGAGKSNLMDAISFVLGVRSMQ-LRGAQL 67 Query: 88 KKR 90 K Sbjct: 68 KDL 70 >gi|167629174|ref|YP_001679673.1| DNA replication and repair protein recf [Heliobacterium modesticaldum Ice1] gi|226737804|sp|B0TAL0|RECF_HELMI RecName: Full=DNA replication and repair protein recF gi|167591914|gb|ABZ83662.1| DNA replication and repair protein recf [Heliobacterium modesticaldum Ice1] Length = 372 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ IE++HFR + +Q ++F + I G NG GK++L E+I L G + R Sbjct: 1 MQIQAIELAHFRNYRGLQ-VDFMPGVNIFVGANGQGKTNLLESIALLSGGGSHRDARDAE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|47157021|gb|AAT12384.1| CUT3-like chromosome segregation protein-like protein [Antonospora locustae] Length = 186 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL I I++F+ F +I DH LT++ G NG GKS++ +A+ ++ G+ ++ Sbjct: 4 LKLTTIRINNFKSFEGEHEISGLDHSLTVIVGPNGSGKSNIIDAVLFVL-GFRAKKMR 60 >gi|154337252|ref|XP_001564859.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061897|emb|CAM38937.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1588 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F G ++ D + Sbjct: 175 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVF-GRNAKKIRLDKL 233 >gi|297618563|ref|YP_003706668.1| SMC domain-containing protein [Methanococcus voltae A3] gi|297618623|ref|YP_003706728.1| SMC domain-containing protein [Methanococcus voltae A3] gi|297377540|gb|ADI35695.1| SMC domain protein [Methanococcus voltae A3] gi|297377600|gb|ADI35755.1| SMC domain protein [Methanococcus voltae A3] Length = 1113 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +E+ +FR KIEF + +T + G+NG GKSS+ +AI + + ++R+++ Sbjct: 7 LKTLELQNFRSHR-NSKIEFKEGITTIVGKNGSGKSSIFQAINYALFAPSKRKEY 60 >gi|193202684|ref|NP_001040658.2| High Incidence of Males (increased X chromosome loss) family member (him-1) [Caenorhabditis elegans] gi|163914651|gb|AAK21378.3| High incidence of males (increased x chromosome loss) protein 1, isoform a [Caenorhabditis elegans] Length = 1262 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 16 LHTLEIENFKSYKGKHTIGPFTRFTAIIGPNGSGKSNLMDAISFVLGE 63 >gi|7500037|pir||T34063 chromosome segregation protein smc1 F28B3.7 [similarity] - Caenorhabditis elegans Length = 1310 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 45 LHTLEIENFKSYKGKHTIGPFTRFTAIIGPNGSGKSNLMDAISFVLGE 92 >gi|72548938|ref|XP_843456.1| structural maintenance of chromosome (SMC) family protein [Leishmania major strain Friedlin] gi|323363973|emb|CBZ12979.1| putative structural maintenance of chromosome (SMC) family protein [Leishmania major strain Friedlin] Length = 1321 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQ 79 ++ K+ +E+ +F+ + I F D T + G NG GKS+L +A+ ++ + Sbjct: 1 MLSKIHRVELDNFKSYYGKAVIGPFKD-FTCIVGPNGAGKSNLMDALSFVLSSTVTQASA 59 Query: 80 RRKHGDS 86 G S Sbjct: 60 SSMRGKS 66 >gi|254883810|ref|ZP_05256520.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|319641515|ref|ZP_07996204.1| hypothetical protein HMPREF9011_01802 [Bacteroides sp. 3_1_40A] gi|254836603|gb|EET16912.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|317386871|gb|EFV67761.1| hypothetical protein HMPREF9011_01802 [Bacteroides sp. 3_1_40A] Length = 285 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 28/51 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I I++FR + E + LT++ G NG GK++ EA+EWL + Sbjct: 3 IKKIVITNFRSYYGENTFELSKGLTLIIGGNGDGKTTFFEALEWLLNTSLE 53 >gi|301112485|ref|XP_002998013.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] gi|262112307|gb|EEY70359.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] Length = 1235 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +E+ +F+ + + T V G NG GKS+L +AI ++ ++ R+ + + Sbjct: 3 RIARLELENFKSYGGYHVVGPFHRFTAVIGPNGSGKSNLMDAISFVLGVHS-RQLRSNQL 61 Query: 88 KKRSIKTP 95 + K P Sbjct: 62 RDLVHKAP 69 >gi|146101622|ref|XP_001469160.1| structural maintenance of chromosome (SMC) family protein [Leishmania infantum] gi|134073529|emb|CAM72261.1| putative structural maintenance of chromosome (SMC) family protein [Leishmania infantum JPCM5] Length = 1322 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQ 79 ++ K+ +E+ +F+ + I F D T V G NG GKS+L +A+ ++ + Sbjct: 1 MLSKIHRVELDNFKSYYGKAVIGPFKD-FTCVVGPNGAGKSNLMDALSFVLSSTVTQTSA 59 Query: 80 RRKHGDS 86 G S Sbjct: 60 SSMRGKS 66 >gi|296420428|ref|XP_002839772.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635976|emb|CAZ83963.1| unnamed protein product [Tuber melanosporum] Length = 1245 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + Q I F D T + G NG GKS+ +AI ++ G + Sbjct: 8 KLVRLELFNFKSYKGHQTIYFGDSYFTSIIGPNGSGKSNCMDAISFVL-GIKSSQLRSAH 66 Query: 87 IKKRSIK 93 ++ + Sbjct: 67 LRDLIYR 73 >gi|322503172|emb|CBZ38256.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1322 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQ 79 ++ K+ +E+ +F+ + I F D T V G NG GKS+L +A+ ++ + Sbjct: 1 MLSKIHRVELDNFKSYYGKAVIGPFKD-FTCVVGPNGAGKSNLMDALSFVLSSTVTQTSA 59 Query: 80 RRKHGDS 86 G S Sbjct: 60 SSMRGKS 66 >gi|303244939|ref|ZP_07331264.1| SMC domain protein [Methanothermococcus okinawensis IH1] gi|302484704|gb|EFL47643.1| SMC domain protein [Methanothermococcus okinawensis IH1] Length = 347 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +I + +F+ F + K++ T + G NG GKS++ + I ++ + + Sbjct: 1 MVHLSEIHLKNFKSF-KNAKLKIPSGFTAILGPNGSGKSNIIDGICFVLGKTSAKSLR 57 >gi|197118682|ref|YP_002139109.1| DNA repair exonuclease SbcCD subunit C [Geobacter bemidjiensis Bem] gi|197088042|gb|ACH39313.1| DNA repair exonuclease SbcCD, C subunit, putative [Geobacter bemidjiensis Bem] Length = 987 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +++ +++ + + + + I F+ + +++G NG GKS++ EAI + +G + + + Sbjct: 1 MRIISVQLKNIKSHRDKE-IAFSPGINVLSGANGSGKSTIFEAIGYALFGVSAQDFVSKA 59 Query: 87 IKKRSIKTPM 96 + +I Sbjct: 60 DRFLTIGAKK 69 >gi|284041474|ref|YP_003391814.1| DNA replication and repair protein RecF [Conexibacter woesei DSM 14684] gi|283945695|gb|ADB48439.1| DNA replication and repair protein RecF [Conexibacter woesei DSM 14684] Length = 370 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +++ + + +FR + ++E LT+V+G+NG GK++L +A+ + G + R + Sbjct: 1 MRIVRLALRNFRSYP-TAEVELGAGLTVVSGRNGAGKTNLLDALYFGCTGRSARTTNDRE 59 Query: 87 IKKRSIKTPMPMCM 100 + + + + M Sbjct: 60 LVRFGEQVTRVVVM 73 >gi|322830494|gb|EFZ33497.1| structural maintenance of chromosome protein 4, putative [Trypanosoma cruzi] Length = 1404 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DIE+ +F+ + I F T V G NG GKS++ +A+ ++F ++ Sbjct: 63 MVIRDIEVENFKSYAGKHCIGPFHKTFTAVIGPNGSGKSNVIDAMLFVFGRNAKK 117 >gi|71667236|ref|XP_820569.1| structural maintenance of chromosome protein 4 [Trypanosoma cruzi strain CL Brener] gi|70885919|gb|EAN98718.1| structural maintenance of chromosome protein 4, putative [Trypanosoma cruzi] Length = 1402 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DIE+ +F+ + I F T V G NG GKS++ +A+ ++F ++ Sbjct: 61 MVIRDIEVENFKSYAGKHCIGPFHKTFTAVIGPNGSGKSNVIDAMLFVFGRNAKK 115 >gi|331700399|ref|YP_004397358.1| DNA replication and repair protein recF [Lactobacillus buchneri NRRL B-30929] gi|329127742|gb|AEB72295.1| DNA replication and repair protein recF [Lactobacillus buchneri NRRL B-30929] Length = 372 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +IE+ +FR + + Q +EF+D + + G+N GK++L EAI L + R + Sbjct: 1 MKLTEIELHNFRNYVD-QTLEFSDGINVFLGENAQGKTNLLEAIYVLALTRSHRTNNEKE 59 Query: 87 IKKRSIKT 94 + + +T Sbjct: 60 LINWNSQT 67 >gi|323703939|ref|ZP_08115569.1| DNA replication and repair protein RecF [Desulfotomaculum nigrificans DSM 574] gi|323531097|gb|EGB21006.1| DNA replication and repair protein RecF [Desulfotomaculum nigrificans DSM 574] Length = 367 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I +++FR + + + I+ G N GK++L E+I + G++ R Sbjct: 1 MRVENITLNNFRNYA-KVSFKPHPSINIITGHNAQGKTNLLESIYYSLKGHSFRADRDRD 59 Query: 87 IKKRSIKT 94 + K +T Sbjct: 60 VIKWQQET 67 >gi|316979644|gb|EFV62407.1| putative RecF/RecN/SMC N domain protein [Trichinella spiralis] Length = 1055 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +I I +F+ + I F T + G NG GKS++ +++ ++F GY +R I Sbjct: 77 IKEIWIENFKSYAGRHVIGPFHKSFTAIVGPNGSGKSNVIDSLLFVF-GYRAQRIRSKKI 135 >gi|19112841|ref|NP_596049.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces pombe 972h-] gi|27734444|sp|O94383|SMC1_SCHPO RecName: Full=Structural maintenance of chromosomes protein 1; AltName: Full=Chromosome segregation protein smc1; AltName: Full=Cohesin complex subunit psm1 gi|4007792|emb|CAA22432.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces pombe] Length = 1233 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +LL +E+ +F+ + Q I + T + G NG GKS+L +AI ++ G ++ Sbjct: 3 RLLRLEVENFKSYRGHQIIGPFEDFTSIIGPNGAGKSNLMDAISFVL-GVKSSHLRSTNV 61 Query: 88 KKRSIKTP 95 K+ + Sbjct: 62 KELIYRGK 69 >gi|304385858|ref|ZP_07368202.1| recombination protein F [Pediococcus acidilactici DSM 20284] gi|304328362|gb|EFL95584.1| recombination protein F [Pediococcus acidilactici DSM 20284] Length = 374 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +FR + ++ +EF + ++ G+N GK++L E+I +L + R + Sbjct: 1 MYLKTLELHNFRNYADL-SVEFGSGINVLLGENAQGKTNLLESIYFLALTRSHRTSNDRD 59 Query: 87 IKKRSIKTPMPM 98 + K + Sbjct: 60 LIGWKAKEARVL 71 >gi|270289889|ref|ZP_06196115.1| DNA replication and repair protein recF [Pediococcus acidilactici 7_4] gi|270281426|gb|EFA27258.1| DNA replication and repair protein recF [Pediococcus acidilactici 7_4] Length = 374 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +FR + ++ +EF + ++ G+N GK++L E+I +L + R + Sbjct: 1 MYLKTLELHNFRNYADL-SVEFGSGINVLLGENAQGKTNLLESIYFLALTRSHRTSNDRD 59 Query: 87 IKKRSIKTPMPM 98 + K + Sbjct: 60 LIGWKAKEARVL 71 >gi|227494191|ref|ZP_03924507.1| recombination protein F [Actinomyces coleocanis DSM 15436] gi|226831925|gb|EEH64308.1| recombination protein F [Actinomyces coleocanis DSM 15436] Length = 399 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + E IE +T++ G NG GK+++ EAI +L + + R + Sbjct: 1 MYVSHLALNDFRSYKE-TLIELKPGITVLLGYNGQGKTNVIEAIAYLAHLSSHRVNADTA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + + P AV R K Sbjct: 60 LVRYPQNGENPPAAAVIRAK 79 >gi|255084475|ref|XP_002508812.1| condensin complex component [Micromonas sp. RCC299] gi|226524089|gb|ACO70070.1| condensin complex component [Micromonas sp. RCC299] Length = 1240 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E +F HL + G NG GKS+L AI ++ Sbjct: 1 MHIKQVIVEGFKTYREQTAADFEPHLNCIVGANGSGKSNLFHAIRFVL 48 >gi|195150411|ref|XP_002016148.1| GL10652 [Drosophila persimilis] gi|194109995|gb|EDW32038.1| GL10652 [Drosophila persimilis] Length = 1181 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +I+ F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIDGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|218905695|ref|YP_002453529.1| RecF/RecN/SMC N domain, putative [Bacillus cereus AH820] gi|218539280|gb|ACK91678.1| RecF/RecN/SMC N domain, putative [Bacillus cereus AH820] Length = 875 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F + + I++FRG++ EF L ++ G NGYGK+SL +A+EW G +R Sbjct: 6 FLIKKVIINNFRGYSYGT-FEFFKDKDEKRGLILLGGPNGYGKTSLLDAVEWCLSGTIRR 64 Query: 81 RKHGDSIKKRSIKT 94 + I+K + T Sbjct: 65 IQEDYEIRKETSNT 78 >gi|156838994|ref|XP_001643193.1| hypothetical protein Kpol_1011p5 [Vanderwaltozyma polyspora DSM 70294] gi|156113792|gb|EDO15335.1| hypothetical protein Kpol_1011p5 [Vanderwaltozyma polyspora DSM 70294] Length = 1221 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+++F+ + + + F + + T + G NG GKS++ +AI ++ + + Sbjct: 3 RLLGLELNNFKSYKGVVNVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVQSS-HLRSNV 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|50306843|ref|XP_453397.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642531|emb|CAH00493.1| KLLA0D07502p [Kluyveromyces lactis] Length = 1243 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + + ++ F + T + G NG GKS+L +AI ++ G + + Sbjct: 3 RLIGLELHNFKSYKDTVQVGFGESYFTSIIGPNGSGKSNLMDAISFVL-GVRSNQLRSSA 61 Query: 87 IKKRSIKTPMP 97 + + + Sbjct: 62 LVDLIYRGRIE 72 >gi|328948497|ref|YP_004365834.1| hypothetical protein Tresu_1638 [Treponema succinifaciens DSM 2489] gi|328448821|gb|AEB14537.1| hypothetical protein Tresu_1638 [Treponema succinifaciens DSM 2489] Length = 666 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + I + +FR F +Q +EF++ ++TI+ G+NG GK++ ++A W YG T Sbjct: 1 MLIKKITLENFRQFKGLQSVEFSEDNVKNITIILGENGAGKTTFAQAFRWCLYGKT 56 >gi|324501951|gb|ADY40863.1| Structural maintenance of chromosomes protein 2 [Ascaris suum] Length = 1200 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ IEI F+ + + Q ++ F + G NG GKS++ +AI ++ + Sbjct: 1 MRIKKIEIDGFKSYAQRQVVDGFDAQFNAITGLNGSGKSNILDAICFVLGITNLNQVRAV 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 QLSDLVYKQ 69 >gi|170109175|ref|XP_001885795.1| condensin complex subunit SMC1 [Laccaria bicolor S238N-H82] gi|164639375|gb|EDR03647.1| condensin complex subunit SMC1 [Laccaria bicolor S238N-H82] Length = 1243 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ IE+ F+ + Q I T V G NG GKS+L +AI ++ + + Sbjct: 1 MPLVRIEVCDFKSYRGHQTIGPFRTFTSVIGPNGAGKSNLMDAISFVLGVKSAQ-LRSSQ 59 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 60 LKDLVYRGRR 69 >gi|159042437|ref|YP_001541689.1| SMC domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921272|gb|ABW02699.1| SMC domain protein [Caldivirga maquilingensis IC-167] Length = 805 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +E+ FR F F D L +++G G GKSS+ +AIE+ YG Sbjct: 7 IDSVELEGFRVFKSRVVFNFIDGLNVIHGPIGSGKSSIIQAIEFALYGN 55 >gi|329765638|ref|ZP_08257212.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137882|gb|EGG42144.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 692 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F + ++EF + +T+ GQNG GKSS+ +AI + +G R+ + IK Sbjct: 2 ITAIELGDFLSHS-QTRLEFGNGVTVFVGQNGAGKSSIIDAITFALFGQHTRKSNKGLIK 60 Query: 89 KRS 91 + S Sbjct: 61 RGS 63 >gi|332707257|ref|ZP_08427310.1| RecF/RecN/SMC protein [Lyngbya majuscula 3L] gi|332353991|gb|EGJ33478.1| RecF/RecN/SMC protein [Lyngbya majuscula 3L] Length = 718 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGF---TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++L+ ++I FRGF ++ F T++ G G GKSS AIEW +G K Sbjct: 4 YRLVSVKIKGFRGFPEQAGEREFRFDQACTLIVGAQGGGKSSTLNAIEWCLFGKDVANKS 63 Query: 84 GDSIKKR 90 I++R Sbjct: 64 ATKIEER 70 >gi|260102298|ref|ZP_05752535.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083895|gb|EEW68015.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 689 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +EI++FR F E Q I F + + I+ G N GK+++ AI +F + K G I Sbjct: 8 ISSVEITNFRTFKEKQIIRFTEGINILVGPNNIGKTTIISAIRLIFD----KNKFGLDIN 63 Query: 89 KRS-IKTPMPMCMAVPR 104 S +T + P+ Sbjct: 64 DFSKTETKEELKNCSPK 80 >gi|71983122|gb|AAZ57430.1| structural maintenance of chromosome 3 [Toxoplasma gondii] Length = 1491 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRK 82 + ++ I FR + I F+ + G NG GKS++ AI + T+RR Sbjct: 1 MHIKEVTIRGFRTYRHSTTIHFSPGYNCIVGANGSGKSNVLLAIAFALGEGGQSSTERRM 60 >gi|253700544|ref|YP_003021733.1| SMC domain protein [Geobacter sp. M21] gi|251775394|gb|ACT17975.1| SMC domain protein [Geobacter sp. M21] Length = 987 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +++ + + + + + + I F+ + +++G NG GKS++ EAI + +G + + + Sbjct: 1 MRIISVHLKNIKSHRDKE-IAFSPGINVLSGANGSGKSTIFEAIGYALFGVSAQDFVSKA 59 Query: 87 IKKRSIKTPM 96 + +I Sbjct: 60 DRFLTIGAKK 69 >gi|237842191|ref|XP_002370393.1| structural maintenance of chromosome domain-containing protein [Toxoplasma gondii ME49] gi|211968057|gb|EEB03253.1| structural maintenance of chromosome domain-containing protein [Toxoplasma gondii ME49] gi|221502848|gb|EEE28562.1| structural maintenance of chromosome domain-containing protein [Toxoplasma gondii VEG] Length = 1523 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRK 82 + ++ I FR + I F+ + G NG GKS++ AI + T+RR Sbjct: 1 MHIKEVTIRGFRTYRHSTTIHFSPGYNCIVGANGSGKSNVLLAIAFALGEGGQSSTERRM 60 >gi|203283973|ref|YP_002221713.1| P115 protein [Borrelia duttonii Ly] gi|203287516|ref|YP_002222531.1| P115 protein [Borrelia recurrentis A1] gi|201083416|gb|ACH93007.1| P115 protein [Borrelia duttonii Ly] gi|201084736|gb|ACH94310.1| P115 protein [Borrelia recurrentis A1] Length = 821 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ L I + F+ F ++Q+++ L + G NG GKS+L +AI + Sbjct: 3 VVLFLEKIGLLGFKSFVKMQELKLNSSLNFIVGPNGCGKSNLLDAIRFCIGEDNLSILRI 62 Query: 85 DSIKKR-SIKTPMPMCMA 101 I S+ A Sbjct: 63 KHITDLISVSKSKESNFA 80 >gi|325969543|ref|YP_004245735.1| SMC domain-containing protein [Vulcanisaeta moutnovskia 768-28] gi|323708746|gb|ADY02233.1| SMC domain-containing protein [Vulcanisaeta moutnovskia 768-28] Length = 827 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 31/51 (60%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ ++ I FRGF +I F D + I++G G GK+S+ ++IE+ YG Sbjct: 3 IRINELIIRDFRGFMGENRISFNDGINIIHGPVGSGKTSIVQSIEYALYGT 53 >gi|195123793|ref|XP_002006386.1| GI21017 [Drosophila mojavensis] gi|193911454|gb|EDW10321.1| GI21017 [Drosophila mojavensis] Length = 1177 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|156097979|ref|XP_001615022.1| chromosome associated protein [Plasmodium vivax SaI-1] gi|148803896|gb|EDL45295.1| chromosome associated protein, putative [Plasmodium vivax] Length = 1196 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I++ FR + I+F + + G NG GKS++ AIE++ Sbjct: 1 MYIKQIKLKGFRTYKNETTIDFTKGINCIVGFNGSGKSNILLAIEFIL 48 >gi|146421940|ref|XP_001486913.1| hypothetical protein PGUG_00290 [Meyerozyma guilliermondii ATCC 6260] Length = 1256 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + K+ F D T + G NG GKS++ +AI ++ + + + Sbjct: 48 RLVGLELYNFKSYRGTCKVGFGDSFFTSIIGPNGAGKSNMMDAISFVLGVNSSQ-LRSRN 106 Query: 87 IKKRSIK 93 ++ + Sbjct: 107 LQDLIYR 113 >gi|225438119|ref|XP_002273034.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1308 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ T + G Sbjct: 9 KIHRLELENFKSYKGFQTIGPFYD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGAQ 66 Query: 87 IKKRSI-----KTPMPMCMAVPRCKYQL 109 +K + A R YQL Sbjct: 67 LKDLIYAFDDKEKEQKGRRAFVRLVYQL 94 >gi|221053632|ref|XP_002258190.1| chromosome associated protein [Plasmodium knowlesi strain H] gi|193808023|emb|CAQ38727.1| chromosome associated protein, putative [Plasmodium knowlesi strain H] Length = 1196 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I++ FR + I+F + + G NG GKS++ AIE++ Sbjct: 1 MYIKQIKLKGFRTYKNETTIDFTKGINCIVGFNGSGKSNILLAIEFIL 48 >gi|224085641|ref|XP_002307647.1| condensin complex components subunit [Populus trichocarpa] gi|222857096|gb|EEE94643.1| condensin complex components subunit [Populus trichocarpa] Length = 1232 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L +E+ +F+ + +Q I F D T + G NG GKS+L +AI ++ G G Sbjct: 9 KILKLEMENFKSYKGLQTIGPFKD-FTAIIGPNGAGKSNLMDAISFVL-GVRTGHLRGAQ 66 Query: 87 IKKR 90 +K Sbjct: 67 LKDL 70 >gi|167042367|gb|ABZ07095.1| putative RecF/RecN/SMC N terminal domain protein [uncultured marine crenarchaeote HF4000_ANIW97M7] Length = 686 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +F + ++ F + +T+ G+NG GKSS+ EAI + +G T R D I+ Sbjct: 2 ITSVKLHNFLSHKD-TELSFDNGVTVFIGENGAGKSSIIEAITFALFGKTTRGAIEDVIR 60 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 + + V KYQ Sbjct: 61 DGETQAVTQIYFEVNGKKYQ 80 >gi|195382721|ref|XP_002050077.1| GJ21940 [Drosophila virilis] gi|194144874|gb|EDW61270.1| GJ21940 [Drosophila virilis] Length = 1177 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDREFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|71030088|ref|XP_764686.1| hypothetical protein [Theileria parva strain Muguga] gi|68351642|gb|EAN32403.1| hypothetical protein TP02_0117 [Theileria parva] Length = 1398 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+LI + + +++F+ + + I F T + G NG GKS++ +A+ ++F G+ ++ Sbjct: 39 RRLI--IHKVVLNNFKSYGGVTTIGPFHKRFTSIVGPNGSGKSNVIDAMLFVF-GFRAKQ 95 Query: 82 KHGDSIKKRSIKTPMPMC 99 D + + + + Sbjct: 96 IRFDKLSELIHNSKYYLN 113 >gi|119952850|ref|YP_945059.1| chromosome partition protein Smc [Borrelia turicatae 91E135] gi|119861621|gb|AAX17389.1| chromosome partition protein Smc [Borrelia turicatae 91E135] Length = 821 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + F+ F ++Q+++ L + G NG GKS+L +AI + I Sbjct: 7 LEKIGLLGFKSFVKMQELKLNSSLNFIVGPNGCGKSNLLDAIRFCIGEDNLSVLRVKYIT 66 Query: 89 KRSIKTP 95 Sbjct: 67 DLISDVK 73 >gi|219128749|ref|XP_002184568.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404018|gb|EEC43967.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1232 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I IS+FR F + +IE F+ H V G+NG GKS+L +A++++ + Sbjct: 1 MHIKQITISNFRSFRQQPEIEAFSTHTNCVVGRNGSGKSNLLDAVQFVLLAPRFANLRQE 60 >gi|254976971|ref|ZP_05273443.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-66c26] gi|255651889|ref|ZP_05398791.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-37x79] gi|260687153|ref|YP_003218287.1| putative conjugative transposon DNA recombination protein [Clostridium difficile R20291] gi|306520352|ref|ZP_07406699.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-32g58] gi|260213170|emb|CBE04624.1| putative conjugative transposon DNA recombination protein [Clostridium difficile R20291] Length = 540 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 + ++I +F+ F++ ++F + + I+ G NG GKS++ EAI + G + + Sbjct: 1 MSIRKLKIKNFKCFSDWFIVDFENGINILVGNNGTGKSTILEAINLVLTGTYHGKNIRNE 60 >gi|308801941|ref|XP_003078284.1| structural maintenance of chromosomes 1 protein (ISS) [Ostreococcus tauri] gi|116056735|emb|CAL53024.1| structural maintenance of chromosomes 1 protein (ISS) [Ostreococcus tauri] Length = 1131 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ IE+ +F+ + I T V G NG GKS+L +AI ++ + + G + Sbjct: 16 RISRIEVENFKSYKGQHVIGPFKTFTSVIGPNGSGKSNLMDAISFVLGVRSAQ-LRGTTF 74 Query: 88 KKR 90 K Sbjct: 75 KDL 77 >gi|221121736|ref|XP_002162125.1| PREDICTED: similar to structural maintenance of chromosomes 1A, partial [Hydra magnipapillata] Length = 164 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L +EI +F+ + I F+ + + G NG GKS++ +AI ++ T S+ Sbjct: 4 YLEKLEIINFKSYKGKHLIGFSK-FSAIIGPNGCGKSNMMDAISFVLGEKTS-NLRVKSV 61 Query: 88 KKRSIKTPMPMCMA 101 K+ P+ +A Sbjct: 62 KELIHGAPIKQPVA 75 >gi|117306688|gb|AAI26824.1| SMC1A protein [Bos taurus] Length = 176 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|198457205|ref|XP_001360588.2| GA10161 [Drosophila pseudoobscura pseudoobscura] gi|198135898|gb|EAL25163.2| GA10161 [Drosophila pseudoobscura pseudoobscura] Length = 1181 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +I+ F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIDGFDREFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|228478114|ref|ZP_04062725.1| DNA replication and repair protein RecF [Streptococcus salivarius SK126] gi|228250294|gb|EEK09547.1| DNA replication and repair protein RecF [Streptococcus salivarius SK126] Length = 366 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 1 MWLEKIDIQHFRNYTE-TSVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIQFQQNT 67 >gi|93006189|ref|YP_580626.1| SMC protein-like [Psychrobacter cryohalolentis K5] gi|92393867|gb|ABE75142.1| SMC protein-like [Psychrobacter cryohalolentis K5] Length = 875 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 S A LI +++ +E+ FRGF + + + ++ ++ G NG GK+S EA+E+ G Sbjct: 71 SSKANPLIKRIVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCEALEYGLLGSV 130 Query: 79 QRRKHGDSIKKRSIK 93 D+ + ++ Sbjct: 131 AE---ADNKRFKNQD 142 >gi|125974859|ref|YP_001038769.1| DNA replication and repair protein RecF [Clostridium thermocellum ATCC 27405] gi|256003885|ref|ZP_05428872.1| DNA replication and repair protein RecF [Clostridium thermocellum DSM 2360] gi|281418686|ref|ZP_06249705.1| DNA replication and repair protein RecF [Clostridium thermocellum JW20] gi|166220707|sp|A3DHZ7|RECF_CLOTH RecName: Full=DNA replication and repair protein recF gi|125715084|gb|ABN53576.1| DNA replication and repair protein RecF [Clostridium thermocellum ATCC 27405] gi|255992223|gb|EEU02318.1| DNA replication and repair protein RecF [Clostridium thermocellum DSM 2360] gi|281407770|gb|EFB38029.1| DNA replication and repair protein RecF [Clostridium thermocellum JW20] gi|316939070|gb|ADU73104.1| DNA replication and repair protein RecF [Clostridium thermocellum DSM 1313] Length = 369 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +FR + + I+F+ +L I+ GQN GK+++ EA+ G + R Sbjct: 1 MYIDRILLKNFRNYKDET-IKFSKNLNIIYGQNAQGKTNIIEAVFLCASGRSHRTSKDTE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|190344508|gb|EDK36192.2| hypothetical protein PGUG_00290 [Meyerozyma guilliermondii ATCC 6260] Length = 1256 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + K+ F D T + G NG GKS++ +AI ++ + + + Sbjct: 48 RLVGLELYNFKSYRGTCKVGFGDSFFTSIIGPNGAGKSNMMDAISFVLGVNSSQ-LRSRN 106 Query: 87 IKKRSIK 93 ++ + Sbjct: 107 LQDLIYR 113 >gi|19922276|ref|NP_610995.1| SMC2 [Drosophila melanogaster] gi|5815438|gb|AAD52673.1|AF179287_1 SMC2 [Drosophila melanogaster] gi|7303132|gb|AAF58197.1| SMC2 [Drosophila melanogaster] Length = 1179 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|309356249|emb|CAP37488.2| CBR-HIM-1 protein [Caenorhabditis briggsae AF16] Length = 1289 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 29 LHTLEIENFKSYKGKHIIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 76 >gi|291558077|emb|CBL35194.1| hypothetical protein ES1_23660 [Eubacterium siraeum V10Sc8a] Length = 660 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +FR F K++F+ ++TI+ G N +GK++L +A W FYG + Sbjct: 1 MLIKTLRMENFRQFRGTTKVDFSCDPNKNVTIILGDNTFGKTTLLQAFNWCFYGKVNFDQ 60 Query: 83 HGDSIKKRSIKTPM 96 D + + M Sbjct: 61 RPDFLLNYELSEEM 74 >gi|197301363|ref|ZP_03166444.1| hypothetical protein RUMLAC_00090 [Ruminococcus lactaris ATCC 29176] gi|197299520|gb|EDY34039.1| hypothetical protein RUMLAC_00090 [Ruminococcus lactaris ATCC 29176] Length = 1083 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 Y R+ K + IS F + +I+F + ++ G G GK+++ +AI + YG Sbjct: 3 YERRDQMKPEKLVISAFGPYAGRTEIDFTKLGGQGIYLITGDTGAGKTTIFDAITFALYG 62 Query: 77 YTQRRKHGDSIKKRSIKTP 95 + ++ + Sbjct: 63 EASGQVRDSAMFRSKYAAE 81 >gi|194755383|ref|XP_001959971.1| GF11775 [Drosophila ananassae] gi|190621269|gb|EDV36793.1| GF11775 [Drosophila ananassae] Length = 688 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|66809611|ref|XP_638528.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|74996882|sp|Q54PK4|SMC2_DICDI RecName: Full=Structural maintenance of chromosomes protein 2 gi|60467140|gb|EAL65176.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1184 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + DI I F+ + IE F + G NG GKS++ ++I ++ + D Sbjct: 1 MYIEDIIIDGFKSYANRTVIEGFDPTFNAITGLNGSGKSNILDSICFVLGISNLSQVRVD 60 Query: 86 SIKKRSIK 93 S+++ K Sbjct: 61 SLQELVYK 68 >gi|254422702|ref|ZP_05036420.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] gi|196190191|gb|EDX85155.1| RecF/RecN/SMC N terminal domain, putative [Synechococcus sp. PCC 7335] Length = 921 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L + +++F+ E Q+ +F + G+NG GK+S+ EAI W+ + Y K D Sbjct: 1 MQILSVALTNFKTHKE-QQFDFQLGTNAICGENGAGKTSILEAIAWVLFNYQGSYKKEDL 59 Query: 87 IK 88 I+ Sbjct: 60 IR 61 >gi|307181546|gb|EFN69108.1| Structural maintenance of chromosomes protein 1A [Camponotus floridanus] Length = 955 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L I + +F+ F I+ T + G NG GKS++ +AI ++ Sbjct: 3 ISLKAITLFNFKSFRGKVVIDHFHPFTAIIGPNGSGKSNIMDAISFVLGET 53 >gi|194882959|ref|XP_001975577.1| GG22392 [Drosophila erecta] gi|190658764|gb|EDV55977.1| GG22392 [Drosophila erecta] Length = 1179 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|268562094|ref|XP_002646601.1| C. briggsae CBR-HIM-1 protein [Caenorhabditis briggsae] Length = 1270 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 12 LHTLEIENFKSYKGKHIIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 59 >gi|150401409|ref|YP_001325175.1| chromosome segregation protein SMC [Methanococcus aeolicus Nankai-3] gi|150014112|gb|ABR56563.1| chromosome segregation protein SMC [Methanococcus aeolicus Nankai-3] Length = 1191 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ T + G NG GKS++ + I ++ + + Sbjct: 4 LSEIHLKNFKSF-KNVKLKIPSGFTAILGPNGSGKSNIIDGICFVLGKTSAKSLR 57 >gi|68051267|gb|AAY84898.1| LD32453p [Drosophila melanogaster] Length = 1190 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 12 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 71 Query: 86 SIKKRSIK 93 +++ K Sbjct: 72 ALQDLVYK 79 >gi|282896236|ref|ZP_06304259.1| RecF protein [Raphidiopsis brookii D9] gi|281198925|gb|EFA73803.1| RecF protein [Raphidiopsis brookii D9] Length = 371 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +FR + E QK+EF TI+ G N GKS+L E++E L + R Sbjct: 1 MYLQSLELRNFRNYQE-QKVEFTAPKTILVGNNAQGKSNLLESVELLATLRSHRLGKDSD 59 Query: 87 IKKRSIKTPM 96 + Sbjct: 60 FIQEGQDMAR 69 >gi|195334479|ref|XP_002033905.1| GM20175 [Drosophila sechellia] gi|194125875|gb|EDW47918.1| GM20175 [Drosophila sechellia] Length = 1179 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|206976162|ref|ZP_03237071.1| ATPase involved in DNA repair, putative [Bacillus cereus H3081.97] gi|206745616|gb|EDZ57014.1| ATPase involved in DNA repair, putative [Bacillus cereus H3081.97] Length = 898 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I +F+ + + + + + ++ G NG+GKSS +AIEW G R Sbjct: 1 MKIERLIIKNFKNYMGEVEFDLSKEVILLYGANGFGKSSFFDAIEWCLTGKINR 54 >gi|148675530|gb|EDL07477.1| structural maintenance of chromosomes 1A, isoform CRA_b [Mus musculus] Length = 1043 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 SY + ++ L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 28 SYASAAVMGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 87 >gi|209879826|ref|XP_002141353.1| structural maintenance of chromosomes protein [Cryptosporidium muris RN66] gi|209556959|gb|EEA07004.1| structural maintenance of chromosomes protein, putative [Cryptosporidium muris RN66] Length = 1330 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIE 71 LS + T+ +R +I +E+ +F+ + + I F T + G NG GKS++ +A+ Sbjct: 11 LSGTTTNSSSRLII---HKLELENFKSYGGKKIIGPFHKSFTAIVGPNGSGKSNVIDAML 67 Query: 72 WLFYGYTQRRKHGDSIKKRSIKTPM 96 ++F G R + + + Sbjct: 68 FVF-GKRARHMRLNKVSDLVHNSKQ 91 >gi|195486110|ref|XP_002091365.1| GE12281 [Drosophila yakuba] gi|194177466|gb|EDW91077.1| GE12281 [Drosophila yakuba] Length = 1179 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 ALQDLVYK 68 >gi|82593920|ref|XP_725208.1| chromosome-associated polypeptide [Plasmodium yoelii yoelii str. 17XNL] gi|23480124|gb|EAA16773.1| chromosome-associated polypeptide, putative [Plasmodium yoelii yoelii] Length = 971 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I++ FR + IEF + + G NG GKS++ AIE++ ++ Sbjct: 1 MYIKQIKLKGFRTYKNETVIEFTKGINCIVGFNGSGKSNILMAIEFILSDMSE 53 >gi|116628687|ref|YP_813859.1| recombination protein F [Lactobacillus gasseri ATCC 33323] gi|238853342|ref|ZP_04643722.1| DNA replication and repair protein RecF [Lactobacillus gasseri 202-4] gi|311111573|ref|ZP_07712970.1| DNA replication and repair protein RecF [Lactobacillus gasseri MV-22] gi|122274315|sp|Q047F1|RECF_LACGA RecName: Full=DNA replication and repair protein recF gi|116094269|gb|ABJ59421.1| DNA replication and repair protein RecF [Lactobacillus gasseri ATCC 33323] gi|238834030|gb|EEQ26287.1| DNA replication and repair protein RecF [Lactobacillus gasseri 202-4] gi|311066727|gb|EFQ47067.1| DNA replication and repair protein RecF [Lactobacillus gasseri MV-22] Length = 374 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E++ +F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNFKELKT-DFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|15606061|ref|NP_213438.1| chromosome assembly protein [Aquifex aeolicus VF5] gi|2983243|gb|AAC06839.1| chromosome assembly protein homolog [Aquifex aeolicus VF5] Length = 1156 Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + F+ + +K I + V G NG GKS++ +AI + + + + Sbjct: 6 YIEKIVVEGFKSYGTKRKEIPLGEGFIAVVGPNGAGKSNIGDAISFALGLSSAKALRAKN 65 Query: 87 I 87 + Sbjct: 66 L 66 >gi|116754779|ref|YP_843897.1| SMC domain-containing protein [Methanosaeta thermophila PT] gi|116666230|gb|ABK15257.1| SMC domain protein [Methanosaeta thermophila PT] Length = 1061 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + I F D LT + G NG GKS++ EAI W YG Sbjct: 1 MHLNRLVLRNFKKYR-RADITFQDGLTGIIGGNGAGKSTIVEAIAWALYGSRA 52 >gi|322818970|gb|EFZ26236.1| structural maintenance of chromosome (SMC) family protein, putative [Trypanosoma cruzi] Length = 1265 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + +E+ +F+ + I T + G NG GKS+L +A+ ++ G Sbjct: 1 MLSHIDRVELYNFKSYAGNVTIGPLKDFTCIVGPNGAGKSNLMDALCFVLSPSATTTLRG 60 Query: 85 DSIKKR 90 Sbjct: 61 KDATDL 66 >gi|294673766|ref|YP_003574382.1| hypothetical protein PRU_1052 [Prevotella ruminicola 23] gi|294473447|gb|ADE82836.1| conserved hypothetical protein [Prevotella ruminicola 23] Length = 719 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++EI +FR + + + EF LT++ G NG GK++ EA+EWLF R K Sbjct: 3 LKELEIRNFRSYYGNENRFEFNPTGLTLIIGDNGDGKTTFFEALEWLFDTTGLREK 58 >gi|154250041|ref|YP_001410866.1| DNA replication and repair protein RecF [Fervidobacterium nodosum Rt17-B1] gi|154153977|gb|ABS61209.1| DNA replication and repair protein RecF [Fervidobacterium nodosum Rt17-B1] Length = 339 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR F+E + + F D + ++ G NG GK+S+ EAI +L + R Sbjct: 6 MLIESLRLRNFRCFSEYE-VNFKDGINVIYGPNGAGKTSILEAIAYLSNPRSFRGGRDYH 64 Query: 87 IKKRS 91 + K Sbjct: 65 LIKFG 69 >gi|320580922|gb|EFW95144.1| chromosomal ATPase, putative [Pichia angusta DL-1] Length = 1216 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I I F T + G NG GKS++ +AI ++ G ++ Sbjct: 3 RLVGLELYNFKSYRGISSIGFGSSFFTSIIGPNGSGKSNMMDAISFVL-GIKSSHLRSNN 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|71661871|ref|XP_817950.1| structural maintenance of chromosome (SMC) family protein [Trypanosoma cruzi strain CL Brener] gi|70883173|gb|EAN96099.1| structural maintenance of chromosome (SMC) family protein, putative [Trypanosoma cruzi] Length = 1267 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + +E+ +F+ + I T + G NG GKS+L +A+ ++ G Sbjct: 1 MLSHIDRVELYNFKSYAGNVTIGPLKDFTCIVGPNGAGKSNLMDALCFVLSPSATTTLRG 60 Query: 85 DSIKKR 90 Sbjct: 61 KDATDL 66 >gi|321257716|ref|XP_003193684.1| chromosome segregation protein [Cryptococcus gattii WM276] gi|317460154|gb|ADV21897.1| Chromosome segregation protein, putative [Cryptococcus gattii WM276] Length = 1208 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + ++ F+ +V G+NG GKS+ AI ++ + + Sbjct: 1 MYIKTITIQGFKSYRDQVAVDPFSPGHNVVVGRNGSGKSNFFSAIRFVLSDQYTKLSREE 60 Query: 86 SIK 88 + Sbjct: 61 RQR 63 >gi|313904728|ref|ZP_07838102.1| DNA replication and repair protein RecF [Eubacterium cellulosolvens 6] gi|313470521|gb|EFR65849.1| DNA replication and repair protein RecF [Eubacterium cellulosolvens 6] Length = 362 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ +FR + E ++F ++ G N GK++L EAI L + + H Sbjct: 1 MHVESLELKNFRNY-ERIVLDFDSGTNVLYGDNAQGKTNLLEAIHVLGTTKSHKGSHDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 MIRFGED 66 >gi|222056263|ref|YP_002538625.1| SMC domain protein [Geobacter sp. FRC-32] gi|221565552|gb|ACM21524.1| SMC domain protein [Geobacter sp. FRC-32] Length = 992 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I + + + + + I F+ + +++G NG GKS++ EAI + +G R + Sbjct: 1 MQILSIHLKNIKSHRDSE-IHFSPGINVLSGPNGIGKSTIFEAIGYAMFGVDARDFVSNV 59 Query: 87 IKKRSIKTPM 96 + +I Sbjct: 60 DRFLTIGAKR 69 >gi|260911970|ref|ZP_05918534.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633917|gb|EEX52043.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 658 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F+G + I+F + +T ++G+NG GK+++ +A WL +G + + IK Sbjct: 6 IKKLSLVNFKGIRSLT-IDFNEGVTTISGRNGLGKTTIFDAFTWLLFGKDSKERKQFGIK 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 +PR +++ Sbjct: 65 TYGKDGK-----TIPRLPHEV 80 >gi|291480605|gb|ADE06380.1| structural maintenance of chromosomes 1-like 1 [Microtus arvalis] gi|291480607|gb|ADE06381.1| structural maintenance of chromosomes 1-like 1 [Microtus levis] Length = 104 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|71412992|ref|XP_808655.1| structural maintenance of chromosome (SMC) family protein [Trypanosoma cruzi strain CL Brener] gi|42740744|gb|AAS44546.1| structural maintenance of chromosome protein 1 [Trypanosoma cruzi] gi|70872905|gb|EAN86804.1| structural maintenance of chromosome (SMC) family protein, putative [Trypanosoma cruzi] Length = 1262 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + +E+ +F+ + I T + G NG GKS+L +A+ ++ G Sbjct: 1 MLSHIDRVELYNFKSYAGNVTIGPLKDFTCIVGPNGAGKSNLMDALCFVLSPSATTTLRG 60 Query: 85 DSIKKR 90 Sbjct: 61 KDATDL 66 >gi|195583502|ref|XP_002081556.1| GD25652 [Drosophila simulans] gi|194193565|gb|EDX07141.1| GD25652 [Drosophila simulans] Length = 1179 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE--FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + F+ + +IE F T + G NG GKS++ ++I ++ + Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGEFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRA 60 Query: 85 DSIKKRSIK 93 +++ K Sbjct: 61 SALQDLVYK 69 >gi|316978493|gb|EFV61475.1| putative RecF/RecN/SMC N domain protein [Trichinella spiralis] Length = 1819 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +IE+ +F+ + Q+I T + G NG GKS+L +AI ++ T Sbjct: 4 LREIELENFKSYKGYQRIGPFKKFTAIIGPNGSGKSNLMDAICFVLGEKT 53 >gi|326430832|gb|EGD76402.1| hypothetical protein PTSG_07521 [Salpingoeca sp. ATCC 50818] Length = 1240 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E+ +F+ + I + V G NG GKS+L +AI ++ G R G Sbjct: 1 MRLDRLELENFKSYGGHCVIGPFTAFSAVIGPNGSGKSNLMDAISFVL-GVRARELRGAQ 59 Query: 87 IKKRSIKT 94 +K + Sbjct: 60 LKDLIYSS 67 >gi|313902782|ref|ZP_07836179.1| DNA replication and repair protein RecF [Thermaerobacter subterraneus DSM 13965] gi|313466902|gb|EFR62419.1| DNA replication and repair protein RecF [Thermaerobacter subterraneus DSM 13965] Length = 377 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E +E LT++ G NG GK++L EAI + G + R Sbjct: 1 MVIRRVVLRQFRSY-EQATLELDSGLTLLAGPNGIGKTNLLEAIHFAATGRSPRTTRDTD 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRHG 64 >gi|123471672|ref|XP_001319034.1| SMC flexible hinge domain protein [Trichomonas vaginalis G3] gi|121901808|gb|EAY06811.1| SMC flexible hinge domain protein, putative [Trichomonas vaginalis G3] Length = 1169 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I +S F+ + + ++ F + + G NG GKS++ +AI ++ + Sbjct: 1 MYIERIILSGFKSYRDHTVVDGFDPYFNAITGLNGSGKSNVLDAICFVLGMSNISNLRAE 60 Query: 86 SIKKRSIKT 94 ++ K+ Sbjct: 61 GLQGLIYKS 69 >gi|159485144|ref|XP_001700607.1| structural maintenance of chromosomes protein 1 [Chlamydomonas reinhardtii] gi|158272131|gb|EDO97936.1| structural maintenance of chromosomes protein 1 [Chlamydomonas reinhardtii] Length = 818 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +E+ +F+ + Q I T V G NG GKS+L +AI ++ Sbjct: 13 RIDRLEVENFKSYRGRQFIGPFKPFTAVIGPNGSGKSNLMDAISFVLG 60 >gi|58266090|ref|XP_570201.1| chromosome associated protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110944|ref|XP_775936.1| hypothetical protein CNBD3430 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258602|gb|EAL21289.1| hypothetical protein CNBD3430 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226434|gb|AAW42894.1| chromosome associated protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1208 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + ++ F+ +V G+NG GKS+ AI ++ + + Sbjct: 1 MYIKTITIQGFKSYRDQVAVDPFSPGHNVVVGRNGSGKSNFFSAIRFVLSDQYTKLSREE 60 Query: 86 SIK 88 + Sbjct: 61 RQR 63 >gi|45382553|ref|NP_990561.1| structural maintenance of chromosomes protein 2 [Gallus gallus] gi|2500794|sp|Q90988|SMC2_CHICK RecName: Full=Structural maintenance of chromosomes protein 2; Short=SMC protein 2; Short=SMC-2; AltName: Full=Chromosome scaffold protein ScII gi|572692|emb|CAA56767.1| chicken SCII [Gallus gallus] Length = 1189 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + +I +F + G NG GKS++ ++I +L + Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLVYK 68 >gi|220927524|ref|YP_002504433.1| SMC domain protein [Clostridium cellulolyticum H10] gi|219997852|gb|ACL74453.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 985 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++KL IE+ +FR F + IEF + + + G NG GK++L +A EWL G Sbjct: 1 MYKLSKIELDNFRVFKGHKTIEFLNRTGSPYNFICIYGSNGSGKTALVDAFEWLATGKLH 60 Query: 80 RRKHGDSIKKRSIK 93 R ++ +S + Sbjct: 61 RIDSDMQVQGKSYE 74 >gi|124505413|ref|XP_001351448.1| chromosome associated protein, putative [Plasmodium falciparum 3D7] gi|75015107|sp|Q8I1U7|SMC3_PLAF7 RecName: Full=Structural maintenance of chromosomes protein 3 homolog gi|23498206|emb|CAD49177.1| chromosome associated protein, putative [Plasmodium falciparum 3D7] Length = 1193 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I + FR + I+F + + G NG GKS++ AIE++ Sbjct: 1 MYIKQIRLKGFRTYKNETTIDFTRGINCIVGFNGSGKSNILLAIEFIL 48 >gi|331091348|ref|ZP_08340188.1| hypothetical protein HMPREF9477_00831 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404509|gb|EGG84053.1| hypothetical protein HMPREF9477_00831 [Lachnospiraceae bacterium 2_1_46FAA] Length = 908 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L +++S F + + I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MKPLQLKLSAFGPYADETVIDFTLLGEKGLYLITGDTGAGKTTIFDAITFALYGEASGNN 60 Query: 83 HGDSIKKRSIKTP 95 G + + P Sbjct: 61 RGADMLRSQYANP 73 >gi|295395933|ref|ZP_06806118.1| possible nuclease sbcCD subunit C [Brevibacterium mcbrellneri ATCC 49030] gi|294971206|gb|EFG47096.1| possible nuclease sbcCD subunit C [Brevibacterium mcbrellneri ATCC 49030] Length = 991 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++L++ I F F ++I+F + L +++G G GK+S+ +AI + YG + Sbjct: 1 MRILNLTIEGFGPFAGKEQIDFDHLTQEGLFLISGPTGAGKTSILDAICFALYGKVPGSR 60 Query: 83 HGDSIKKRSIKTP 95 + TP Sbjct: 61 GKVKQLRSQFATP 73 >gi|321470665|gb|EFX81640.1| hypothetical protein DAPPUDRAFT_211085 [Daphnia pulex] Length = 1217 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L IE+ +F+ + + Q+I ++ + V G NG GKS+ +A+ ++ + Sbjct: 7 RLKYIEVDNFKSYKDFQRIGPFENFSAVIGPNGSGKSNFMDAVSFVMGEKS 57 >gi|296242551|ref|YP_003650038.1| SMC domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095135|gb|ADG91086.1| SMC domain protein [Thermosphaera aggregans DSM 11486] Length = 937 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + F E I F + + G NG GKSS+ EAI + G R + + + Sbjct: 8 LHKITLEGFLSHGE-TSIVFEKGVNTIVGPNGAGKSSILEAIYYALTGDGWRIRRKEDLV 66 Query: 89 KRSIKTPM-PMCMAVPRCKYQLK 110 + ++ + + KYQ++ Sbjct: 67 NLTRRSARVELEFSHEGRKYQVE 89 >gi|84995744|ref|XP_952594.1| smc protein [Theileria annulata strain Ankara] gi|65302755|emb|CAI74862.1| smc protein, putative [Theileria annulata] Length = 1348 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+LI + + +++F+ + + I F T + G NG GKS++ +A+ ++F G+ ++ Sbjct: 39 RRLI--IHKVVLNNFKSYGGVTTIGPFHKRFTSIVGPNGSGKSNVIDAMLFVF-GFRAKQ 95 Query: 82 KHGDSIKKRSIKTPMPMC 99 D + + + + Sbjct: 96 IRFDKLSELIHNSKYYLN 113 >gi|127139521|ref|NP_955836.2| structural maintenance of chromosomes 2 [Danio rerio] gi|220678594|emb|CAX14295.1| novel protein similar to fibroblast growth factor receptor 4 (FGFR4, zgc:55326) [Danio rerio] Length = 1199 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + E +I F + G NG GKS++ ++I +L + Sbjct: 1 MYIKSIVLEGFKSYAERTEINGFDPFFNAITGLNGSGKSNILDSICFLLGISNLSQVRAT 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|261333168|emb|CBH16163.1| structural maintenance of chromosome 2, putative [Trypanosoma brucei gambiense DAL972] Length = 1175 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + + I+ + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKVIDDLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|71748400|ref|XP_823255.1| structural maintenance of chromosome 2 [Trypanosoma brucei TREU927] gi|70832923|gb|EAN78427.1| structural maintenance of chromosome 2, putative [Trypanosoma brucei] Length = 1175 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + + I+ + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKVIDDLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|126726140|ref|ZP_01741982.1| Chromosome segregation protein SMC2 [Rhodobacterales bacterium HTCC2150] gi|126705344|gb|EBA04435.1| Chromosome segregation protein SMC2 [Rhodobacterales bacterium HTCC2150] Length = 1132 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 21/41 (51%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 D LT V G NG GKS+L EA+ W+ R G ++ Sbjct: 4 NDGLTGVVGPNGCGKSNLLEALRWVMGENRPRAMRGGGMED 44 >gi|307106393|gb|EFN54639.1| hypothetical protein CHLNCDRAFT_52951 [Chlorella variabilis] Length = 1256 Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++L +E++ F+ + I T + G NG GKS++ +A+ ++ T + G Sbjct: 8 RILRLEVNSFKSYRGRNTIGPFRKFTTIIGPNGSGKSNVMDAVSFVLGVRTAQ-LRGS 64 >gi|303240060|ref|ZP_07326581.1| DNA replication and repair protein RecF [Acetivibrio cellulolyticus CD2] gi|302592329|gb|EFL62056.1| DNA replication and repair protein RecF [Acetivibrio cellulolyticus CD2] Length = 372 Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +++ +FR + E I+F+ + I+ G+N GK+++ EAI G + R Sbjct: 1 MYIDSLQLRNFRNYKENV-IDFSKNYNIIYGENAQGKTNIVEAIFLCASGRSHRTSKD 57 >gi|325185009|emb|CCA19500.1| ATSMC2 transporter putative [Albugo laibachii Nc14] Length = 1192 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I I F+ + I F H + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIIIDGFKSYATRTVISGFDPHFNAITGFNGSGKSNILDAICFVLGISNLSQVRAG 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|330795458|ref|XP_003285790.1| hypothetical protein DICPUDRAFT_29916 [Dictyostelium purpureum] gi|325084254|gb|EGC37686.1| hypothetical protein DICPUDRAFT_29916 [Dictyostelium purpureum] Length = 1183 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + DI I F+ + IE F + G NG GKS++ ++I ++ + D Sbjct: 1 MYIQDIVIDGFKSYANRTVIEGFDPTFNAITGLNGSGKSNILDSICFVLGISNLSQVRVD 60 Query: 86 SIKKRSIK 93 S+++ K Sbjct: 61 SLQELVYK 68 >gi|187917926|ref|YP_001883489.1| chromosome partition protein Smc [Borrelia hermsii DAH] gi|119860774|gb|AAX16569.1| chromosome partition protein Smc [Borrelia hermsii DAH] Length = 821 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + F+ F ++Q+++ L + G NG GKS+L +AI + I Sbjct: 7 LEKIGLLGFKSFVKMQELKLNSSLNFIVGPNGCGKSNLLDAIRFCIGEDNLSILRVKYIT 66 Query: 89 KR 90 Sbjct: 67 DL 68 >gi|331246889|ref|XP_003336075.1| structural maintenance of chromosomes protein 3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315065|gb|EFP91656.1| structural maintenance of chromosomes protein 3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1221 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I F+ + + +E F+ + +V G+NG GKS+ AI +L D Sbjct: 1 MHIESLTIQGFKSYRDATSVEHFSPGVNVVVGRNGSGKSNFFSAIRFLLNDQYGSLTRED 60 >gi|238768522|dbj|BAH66834.1| hypothetical protein [Staphylococcus aureus] Length = 687 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---- 82 + ++I +FR F + I+F + + ++ G N GKS+L A+ +F G +++ Sbjct: 1 MYISSVKIKNFRNF-DNIDIDFHEGVNVLIGHNNSGKSNLLRALSLIFDGSVRKQLSVED 59 Query: 83 HGDSIKKRSIKTPMP 97 +S+ K S+K P Sbjct: 60 FNNSLTKESLKKEAP 74 >gi|261332002|emb|CBH14995.1| structural maintenance of chromosome 4, putative [Trypanosoma brucei gambiense DAL972] Length = 1366 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 24 KLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +LI + DI++ +F+ + +I F V G NG GKS++ +A+ ++F ++ Sbjct: 19 RLIIR--DIDVENFKSYAGKHRIGPFHKTFATVVGPNGSGKSNVIDAMLFVFGKNARK 74 >gi|171692189|ref|XP_001911019.1| hypothetical protein [Podospora anserina S mat+] gi|170946043|emb|CAP72844.1| unnamed protein product [Podospora anserina S mat+] Length = 1262 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLLRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSSH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|71746554|ref|XP_822332.1| structural maintenance of chromosome 4 [Trypanosoma brucei TREU927] gi|70832000|gb|EAN77504.1| structural maintenance of chromosome 4, putative [Trypanosoma brucei] Length = 1366 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 24 KLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +LI + DI++ +F+ + +I F V G NG GKS++ +A+ ++F ++ Sbjct: 19 RLIIR--DIDVENFKSYAGKHRIGPFHKTFATVVGPNGSGKSNVIDAMLFVFGKNARK 74 >gi|116491822|ref|YP_803557.1| recombination protein F [Pediococcus pentosaceus ATCC 25745] gi|122266714|sp|Q03I57|RECF_PEDPA RecName: Full=DNA replication and repair protein recF gi|116101972|gb|ABJ67115.1| DNA replication and repair protein RecF [Pediococcus pentosaceus ATCC 25745] Length = 374 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +FR + ++ +EF + ++ G+N GK++L E+I +L + R Sbjct: 1 MYLKTLELHNFRNYADLV-VEFGSGINVLLGENAQGKTNLLESIYFLALTRSHRTNSDRD 59 Query: 87 IKKRSIKTPM 96 + K Sbjct: 60 LISWKTKAAR 69 >gi|317140719|ref|XP_001818375.2| subunit of the multiprotein cohesin complex [Aspergillus oryzae RIB40] Length = 1242 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|170078873|ref|YP_001735511.1| recombination protein F [Synechococcus sp. PCC 7002] gi|226737845|sp|B1XJ90|RECF_SYNP2 RecName: Full=DNA replication and repair protein recF gi|169886542|gb|ACB00256.1| DNA repair and genetic recombination protein [Synechococcus sp. PCC 7002] Length = 388 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR + + Q ++F+ TI+ G N GKS+L EA+E L T R Sbjct: 1 MYLQTLHLRNFRNY-QHQHVDFSAQKTILIGNNAQGKSNLLEAVELLASLKTHRTSRDAD 59 Query: 87 IKKRSIKTPM 96 + K+ T Sbjct: 60 LVKQGEATAR 69 >gi|83766230|dbj|BAE56373.1| unnamed protein product [Aspergillus oryzae] Length = 1279 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|322419444|ref|YP_004198667.1| SMC domain-containing protein [Geobacter sp. M18] gi|320125831|gb|ADW13391.1| SMC domain protein [Geobacter sp. M18] Length = 987 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +++ + + + + + + + FA + +++G NG GKS++ EAI + +G + + + Sbjct: 1 MRIVSVHLKNIKSHRDKE-LTFAPGINVLSGANGSGKSTIFEAIGYALFGVSAQDFVSKA 59 Query: 87 IKKRSIKTPM 96 + +I Sbjct: 60 ERFLTIGAKR 69 >gi|121705166|ref|XP_001270846.1| cohesin complex subunit (Psm1), putative [Aspergillus clavatus NRRL 1] gi|119398992|gb|EAW09420.1| cohesin complex subunit (Psm1), putative [Aspergillus clavatus NRRL 1] Length = 1260 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|309356248|emb|CAP37487.2| hypothetical protein CBG_20484 [Caenorhabditis briggsae AF16] Length = 673 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 52 LHTLEIENFKSYKGKHIIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 99 >gi|67525011|ref|XP_660567.1| hypothetical protein AN2963.2 [Aspergillus nidulans FGSC A4] gi|40744358|gb|EAA63534.1| hypothetical protein AN2963.2 [Aspergillus nidulans FGSC A4] gi|259486092|tpe|CBF83658.1| TPA: subunit of the multiprotein cohesin complex (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1261 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELYNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLIYR 68 >gi|299473405|emb|CBN77803.1| structural maintenance of chromosomes 1 protein [Ectocarpus siliculosus] Length = 1295 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ IE +F+ + Q I F D T V G NG GKS+L +AI ++ + + Sbjct: 3 RLIRIEAENFKSYAGTQIIGPFKD-FTAVIGPNGAGKSNLMDAISFVLGVQS-KHLRSTK 60 Query: 87 IKKRSIK 93 + + Sbjct: 61 LSDLVFR 67 >gi|229002236|dbj|BAH57702.1| hypothetical protein [Staphylococcus aureus] Length = 698 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---- 82 + ++I +FR F + I+F + + ++ G N GKS+L A+ +F G +++ Sbjct: 12 MYISSVKIKNFRNF-DNIDIDFHEGVNVLIGHNNSGKSNLLRALSLIFDGSVRKQLSVED 70 Query: 83 HGDSIKKRSIKTPMP 97 +S+ K S+K P Sbjct: 71 FNNSLTKESLKKEAP 85 >gi|71020611|ref|XP_760536.1| hypothetical protein UM04389.1 [Ustilago maydis 521] gi|46100334|gb|EAK85567.1| hypothetical protein UM04389.1 [Ustilago maydis 521] Length = 1218 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +E F+ H +V G+NG GKS+ AI ++ Sbjct: 1 MYIKTLTIQGFKSYRDQTAVEPFSPHHNVVVGRNGSGKSNFFSAIRFVL 49 >gi|322496433|emb|CBZ31503.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1210 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|322488151|emb|CBZ23397.1| structural maintenance of chromosome (SMC),putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1212 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|321398912|emb|CAM65349.2| putative structural maintenance of chromosome (SMC) [Leishmania infantum JPCM5] Length = 1210 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|146076788|ref|XP_001463003.1| structural maintenance of chromosome (SMC) [Leishmania infantum JPCM5] Length = 1151 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|154332077|ref|XP_001561855.1| structural maintenance of chromosome (SMC) [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059176|emb|CAM36875.1| putative structural maintenance of chromosome (SMC) [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1208 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|110678163|ref|YP_681170.1| hypothetical protein RD1_0806 [Roseobacter denitrificans OCh 114] gi|109454279|gb|ABG30484.1| hypothetical protein RD1_0806 [Roseobacter denitrificans OCh 114] Length = 683 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++L ++I +FR F ++EF +T+++G+NG GK+SL A +W+ YG T Sbjct: 1 MRILRLKIKNFRQFYGDCELEFLSDDTSRITVIHGENGSGKTSLLNAFKWVLYGKT 56 >gi|157863934|ref|XP_001687517.1| structural maintenance of chromosome (SMC) [Leishmania major strain Friedlin] gi|68223728|emb|CAJ01960.1| putative structural maintenance of chromosome (SMC) [Leishmania major strain Friedlin] Length = 1210 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + +++ + + H + G NG GKS++ +AI ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKELADLSPHFNAITGLNGSGKSNIFDAICFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|325478881|gb|EGC81991.1| putative DNA replication and repair protein RecF [Anaerococcus prevotii ACS-065-V-Col13] Length = 359 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++++FR + Q +EF + I G N GK++L E++ +L G + ++ + Sbjct: 1 MWIKDLKLNNFRNYF-YQSVEFNEDYNIFIGDNAQGKTNLLESVYYLANGTSFKKIRDND 59 Query: 87 IKKRSIKTPM 96 I + S Sbjct: 60 IIRFSQSQMR 69 >gi|227820724|ref|YP_002824694.1| hypothetical protein NGR_c01380 [Sinorhizobium fredii NGR234] gi|227339723|gb|ACP23941.1| hypothetical protein NGR_c01380 [Sinorhizobium fredii NGR234] Length = 1018 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RK 82 L +E+S+FR + + E +T++ G NG GK+S + +EW G R Sbjct: 4 IFLRSVELSNFRVYGDSYVFELPAEPGVTLITGANGLGKTSFFDGVEWALTGQVGRFSDI 63 Query: 83 HGDSIKKRS 91 DS ++ + Sbjct: 64 RTDSRRREA 72 >gi|284048973|ref|YP_003399312.1| DNA repair ATPase-like protein protein [Acidaminococcus fermentans DSM 20731] gi|283953194|gb|ADB47997.1| DNA repair ATPase-like protein protein [Acidaminococcus fermentans DSM 20731] Length = 757 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L++ ++ F + + I+F + ++ G G GK+++ +AI + YG Sbjct: 1 MRPLELVMNAFGPYAGEETIDFTRLGENRFFLITGPTGSGKTTILDAITFALYGTASGDL 60 Query: 83 HGDSIKKRSIKTP 95 + + TP Sbjct: 61 RDNRSLRSDYATP 73 >gi|322498897|emb|CBZ33970.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1600 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F ++ Sbjct: 180 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVFGRNAKK 232 >gi|322491627|emb|CBZ26900.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1535 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F ++ Sbjct: 176 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVFGRNAKK 228 >gi|321399424|emb|CAM67843.2| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1599 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F ++ Sbjct: 180 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVFGRNAKK 232 >gi|146086010|ref|XP_001465422.1| hypothetical protein [Leishmania infantum JPCM5] Length = 1599 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F ++ Sbjct: 180 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVFGRNAKK 232 >gi|150399459|ref|YP_001323226.1| chromosome segregation protein SMC [Methanococcus vannielii SB] gi|150012162|gb|ABR54614.1| chromosome segregation protein SMC [Methanococcus vannielii SB] Length = 1189 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I + +F+ F + K++ + T + G NG GKS+ + I ++ + + Sbjct: 4 LSEIHMKNFKSF-KNAKLKIQNGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLR 57 >gi|157869068|ref|XP_001683086.1| hypothetical protein [Leishmania major strain Friedlin] gi|68223969|emb|CAJ04753.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1592 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + DI++ +F+ + +I F T V G NG GKS++ +++ ++F ++ Sbjct: 176 IRDIDVENFKSYYGTHRIGPFHKTFTAVIGPNGSGKSNVIDSMLFVFGRNAKK 228 >gi|303271873|ref|XP_003055298.1| condensin complex component [Micromonas pusilla CCMP1545] gi|226463272|gb|EEH60550.1| condensin complex component [Micromonas pusilla CCMP1545] Length = 1335 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE +F+ + Q I T + G NG GKS+L +AI ++ + + G +K Sbjct: 29 IQRIECDNFKSYKGHQVIGPFKQFTSIIGPNGSGKSNLMDAISFVLGVQSAQ-LRGTQLK 87 Query: 89 KRSI 92 Sbjct: 88 DLVY 91 >gi|147860968|emb|CAN78748.1| hypothetical protein VITISV_033290 [Vitis vinifera] Length = 213 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + + G NG GKS++ ++I ++ ++ Sbjct: 1 MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60 Query: 86 SIKKRSIKT 94 +++ K Sbjct: 61 NLQDLVYKQ 69 >gi|326436734|gb|EGD82304.1| Smc4l1 protein [Salpingoeca sp. ATCC 50818] Length = 1294 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + +Q++ F + V G NG GKS++ +A+ ++F G+ ++ + Sbjct: 20 ITKMRLENFKSYYGVQEVGPFHKCFSAVVGPNGSGKSNVIDAMLFVF-GFRAKKIRQAKL 78 Query: 88 KKRSIKTPMPMCMAVPRCK 106 K + + P C+ Sbjct: 79 KDLIHNSEHHQNL--PSCR 95 >gi|302689273|ref|XP_003034316.1| hypothetical protein SCHCODRAFT_81630 [Schizophyllum commune H4-8] gi|300108011|gb|EFI99413.1| hypothetical protein SCHCODRAFT_81630 [Schizophyllum commune H4-8] Length = 1192 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +IE F+ +V G+NG GKS+ AI ++ Sbjct: 1 MYIKTLTIQGFKSYRDQTQIEPFSPKHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|170112746|ref|XP_001887574.1| structural maintenance of chromosome protein 3 [Laccaria bicolor S238N-H82] gi|164637476|gb|EDR01761.1| structural maintenance of chromosome protein 3 [Laccaria bicolor S238N-H82] Length = 1240 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +IE F+ +V G+NG GKS+ AI ++ Sbjct: 1 MYIKTLTIQGFKSYRDQTQIEPFSPRHNVVVGRNGSGKSNFFSAIRFVL 49 >gi|260655697|ref|ZP_05861170.1| putative RecF/RecN/SMC N domain protein [Jonquetella anthropi E3_33 E1] gi|260629614|gb|EEX47808.1| putative RecF/RecN/SMC N domain protein [Jonquetella anthropi E3_33 E1] Length = 1114 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + FA T + G NG GKS++ + + W + R Sbjct: 1 MPFAPGFTAIVGPNGSGKSNILDGLRWALGESSASRLR 38 >gi|118384729|ref|XP_001025504.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila] gi|89307271|gb|EAS05259.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1296 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ +F+ F +I +T + G NG GKS++ +A+ + F R H S Sbjct: 1 MNIYFIEVENFKSFRGKHQIGPFTQMTGIIGPNGCGKSNIVDALTFAFNIENARNHHPIS 60 Query: 87 IKKRSIKTPM 96 + K M Sbjct: 61 SITQQSKPDM 70 >gi|297570616|ref|YP_003696390.1| DNA replication and repair protein RecF [Arcanobacterium haemolyticum DSM 20595] gi|296930963|gb|ADH91771.1| DNA replication and repair protein RecF [Arcanobacterium haemolyticum DSM 20595] Length = 410 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ ++ FR + ++ + F+ +T G+NG GK++L EAI +L + R + Sbjct: 1 MYISDLALNDFRSYRDVV-VSFSPGITTFVGENGQGKTNLVEAIGYLATFSSHRVNADAA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + ++ AV R K Sbjct: 60 LVRQGA------NAAVVRAK 73 >gi|242019635|ref|XP_002430265.1| structural maintenance of chromosomes smc1, putative [Pediculus humanus corporis] gi|212515372|gb|EEB17527.1| structural maintenance of chromosomes smc1, putative [Pediculus humanus corporis] Length = 1228 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + Q I T + G NG GKS+L +AI ++ T +R Sbjct: 4 LKLIELENFKSYKGKQIIGPLKSFTAIIGPNGSGKSNLMDAISFVMGEKTTSLRVKRL-S 62 Query: 85 DSIKKRSIKTPMPMCMAV 102 D I SI P+ +V Sbjct: 63 DLIHGASINQPVSKTASV 80 >gi|119871816|ref|YP_929823.1| SMC domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673224|gb|ABL87480.1| SMC domain protein [Pyrobaculum islandicum DSM 4184] Length = 702 Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKHG--- 84 + IE+ +F+ +F + + + G NG GK+S+ EA+ +G RR G Sbjct: 2 IRKIELYNFKAHA-KAVFKFGEGVNFIYGPNGSGKTSIMEAVSIALFGSQWVRRVGGRWS 60 Query: 85 DSIKK 89 D +K+ Sbjct: 61 DYLKR 65 >gi|325959801|ref|YP_004291267.1| SMC domain-containing protein [Methanobacterium sp. AL-21] gi|325331233|gb|ADZ10295.1| SMC domain protein [Methanobacterium sp. AL-21] Length = 900 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + ++E+ +F+ + KI+F +TI+ G NG GKSS+ EA+ + + Sbjct: 3 IENLEMKNFKSHKD-TKIDFDTGITIIMGGNGAGKSSILEAVSFALFKQ 50 >gi|319427655|gb|ADV55729.1| SMC domain protein [Shewanella putrefaciens 200] Length = 872 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRKH 83 +L + + FRGF + + L ++ G NG GKSS EA+E+ G +R Sbjct: 81 RLKTLTVGPFRGFARQELFDLNSRLVLIYGPNGTGKSSFCEALEYTLLGNVAEAESKRFR 140 Query: 84 GDS 86 + Sbjct: 141 DQN 143 >gi|282889709|ref|ZP_06298248.1| hypothetical protein pah_c004o056 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500283|gb|EFB42563.1| hypothetical protein pah_c004o056 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 236 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E K F+ + ++ G N GK+++ EAI +L G + R + Sbjct: 1 MFLHTLHLHQFRSYRE-AKFTFSPSINLICGPNAIGKTTILEAIHFLMTGRSFRTSQIND 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LIQKG 64 >gi|239826793|ref|YP_002949417.1| ATP-dependent OLD family endonuclease [Geobacillus sp. WCH70] gi|239807086|gb|ACS24151.1| ATP-dependent OLD family endonuclease [Geobacillus sp. WCH70] Length = 634 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + +FRG+ E I F++++ ++ G+N GKS+L EA+E F G + Sbjct: 1 MKLHSLYLKNFRGYREEV-INFSENMNVIIGKNDIGKSTLMEALEIFFNGENKDALVKPE 59 Query: 87 IKKRSIKT 94 I+ ++ + Sbjct: 60 IEDCNVNS 67 >gi|331265720|ref|YP_004325350.1| ATPase involved in DNA repair, putative [Streptococcus oralis Uo5] gi|326682392|emb|CBZ00009.1| ATPase involved in DNA repair, putative [Streptococcus oralis Uo5] Length = 880 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I +F+ + I+F +++T+ G NG+GK+++ +A+E G +R + D Sbjct: 1 MKIQKKFIKNFKNIKGTRIIDFQENVTLFVGPNGFGKTTIFDALELSLTGRIRRIEESDY 60 Query: 87 IK-KRSIKTP 95 + S TP Sbjct: 61 SDGRSSFSTP 70 >gi|160878166|ref|YP_001557134.1| DNA replication and repair protein RecF [Clostridium phytofermentans ISDg] gi|189039622|sp|A9KPP4|RECF_CLOPH RecName: Full=DNA replication and repair protein recF gi|160426832|gb|ABX40395.1| DNA replication and repair protein RecF [Clostridium phytofermentans ISDg] Length = 360 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+S+FR + E +EF+ I+ G N GK+++ EA+ + + I Sbjct: 3 VKSLELSNFRNY-ENLSLEFSPSTNILYGDNAQGKTNILEAVFLCATTKSHKGSKDREII 61 Query: 89 KRSIK 93 K + Sbjct: 62 KLQSE 66 >gi|33667844|gb|AAQ24522.1| Rad18 [Giardia intestinalis] Length = 1283 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I++F + ++F +++++G NG GKSS+ +AI ++ G + + Sbjct: 22 YILRLHITNFLTHRDKV-VDFECPVSLIHGPNGAGKSSILQAIHFVLGGK-AKNIRDNCE 79 Query: 88 KKRSIKT 94 + ++KT Sbjct: 80 RFSNLKT 86 >gi|159108258|ref|XP_001704401.1| SMC6 protein [Giardia lamblia ATCC 50803] gi|157432463|gb|EDO76727.1| SMC6 protein [Giardia lamblia ATCC 50803] Length = 1305 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I++F + ++F +++++G NG GKSS+ +AI ++ G + + Sbjct: 44 YILRLHITNFLTHRDKV-VDFECPVSLIHGPNGAGKSSILQAIHFVLGGK-AKNIRDNCE 101 Query: 88 KKRSIKT 94 + ++KT Sbjct: 102 RFSNLKT 108 >gi|70929827|ref|XP_736915.1| chromosome associated protein [Plasmodium chabaudi chabaudi] gi|218751460|emb|CAH85458.2| chromosome associated protein, putative [Plasmodium chabaudi chabaudi] Length = 225 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I++ FR + IEF + + G NG GKS++ AIE++ ++ Sbjct: 1 MHIKQIKLKGFRTYKNETVIEFTKGINCIVGFNGSGKSNILMAIEFILSDMSE 53 >gi|268562088|ref|XP_002646600.1| Hypothetical protein CBG20484 [Caenorhabditis briggsae] Length = 531 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 45 LHTLEIENFKSYKGKHIIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 92 >gi|328351729|emb|CCA38128.1| Structural maintenance of chromosomes protein 4 [Pichia pastoris CBS 7435] Length = 1441 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +++F+ + Q I F + + G NG GKS++ +A+ ++F G+ + I Sbjct: 234 IDKLVLTNFKSYAGKQTIGPFNPSFSAIVGPNGSGKSNVIDALLFVF-GFRATKMRQSKI 292 Query: 88 KKRSIKTP 95 K+ + Sbjct: 293 KELIHNSE 300 >gi|327264311|ref|XP_003216957.1| PREDICTED: structural maintenance of chromosomes protein 1A-like isoform 1 [Anolis carolinensis] Length = 1233 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQSFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|254569324|ref|XP_002491772.1| Subunit of the condensin complex, which reorganizes chromosomes during cell division [Pichia pastoris GS115] gi|238031569|emb|CAY69492.1| Subunit of the condensin complex, which reorganizes chromosomes during cell division [Pichia pastoris GS115] Length = 1428 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +++F+ + Q I F + + G NG GKS++ +A+ ++F G+ + I Sbjct: 234 IDKLVLTNFKSYAGKQTIGPFNPSFSAIVGPNGSGKSNVIDALLFVF-GFRATKMRQSKI 292 Query: 88 KKRSIKTP 95 K+ + Sbjct: 293 KELIHNSE 300 >gi|71032343|ref|XP_765813.1| hypothetical protein [Theileria parva strain Muguga] gi|68352770|gb|EAN33530.1| SMC protein, putative [Theileria parva] Length = 1322 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +F+ + I+ + G NG GKS+L +AI ++ T G++++ Sbjct: 74 IHAIELHNFKSYFGTVLIDKFASFNAIIGPNGSGKSNLMDAISFVLCIRTS-TLRGNNLR 132 Query: 89 KRSIKTPMP 97 K P P Sbjct: 133 DLINKVPDP 141 >gi|327264313|ref|XP_003216958.1| PREDICTED: structural maintenance of chromosomes protein 1A-like isoform 2 [Anolis carolinensis] Length = 1234 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQSFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|299483502|gb|ADJ19583.1| SMC domain-containing protein [Treponema primitia ZAS-2] Length = 887 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ ++EI FRGFT + F T + G NG GKSS E +E+ G Sbjct: 84 RIYELEIGPFRGFTSQEHFIFDKKYTFLYGPNGSGKSSFCEGLEYALLG 132 >gi|298708399|emb|CBJ48462.1| smc4 [Ectocarpus siliculosus] Length = 177 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +KL + +S F+ +T ++ F D L+ + G NG GKS+L AI + Sbjct: 34 YKLQSVTVSGFKSWTSTARVVFGHDGLSCITGPNGSGKSTLLNAILFGLGENA 86 >gi|170577573|ref|XP_001894059.1| SMC family, C-terminal domain containing protein [Brugia malayi] gi|158599537|gb|EDP37102.1| SMC family, C-terminal domain containing protein [Brugia malayi] Length = 1238 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ +F+ + Q + T + G NG GKS+L +A+ ++ Sbjct: 3 RLHTLELENFKSYKGNQIVGPFKQFTAIIGPNGSGKSNLMDAMCFVLGE 51 >gi|50307571|ref|XP_453765.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642899|emb|CAH00861.1| KLLA0D16005p [Kluyveromyces lactis] Length = 1170 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGISSMATVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|320162926|gb|EFW39825.1| XCAP-E [Capsaspora owczarzaki ATCC 30864] Length = 1253 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +I I F+ + + + F + + G NG GKS++ ++I ++ + Sbjct: 1 MHLHEIIIEGFKSYAQRTTVGPFDERFNAITGLNGSGKSNILDSICFVLGISNLTQVRAG 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|282852317|ref|ZP_06261659.1| DNA replication and repair protein RecF [Lactobacillus gasseri 224-1] gi|282556059|gb|EFB61679.1| DNA replication and repair protein RecF [Lactobacillus gasseri 224-1] Length = 177 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E++ +F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNFKELKT-DFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|299743960|ref|XP_002910729.1| hypothetical protein CC1G_15063 [Coprinopsis cinerea okayama7#130] gi|298405899|gb|EFI27235.1| hypothetical protein CC1G_15063 [Coprinopsis cinerea okayama7#130] Length = 1182 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +IE F+ +V G+NG GKS+ AI ++ Sbjct: 1 MYIKTLTIQGFKSYRDQTQIEPFSPKHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|289191877|ref|YP_003457818.1| SMC domain protein [Methanocaldococcus sp. FS406-22] gi|288938327|gb|ADC69082.1| SMC domain protein [Methanocaldococcus sp. FS406-22] Length = 1006 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I++++F+ E +I F + + + G+NG GKSS+ EA+ + +G R+ G S Sbjct: 3 LKEIKMNNFKSH-ENTRITFDEGIIAIIGENGSGKSSIFEAVFFALFGADALRRMGLSYD 61 Query: 89 KRSIKTPMPMCM 100 + K M + Sbjct: 62 EVITKGKKVMSV 73 >gi|156839145|ref|XP_001643267.1| hypothetical protein Kpol_1063p20 [Vanderwaltozyma polyspora DSM 70294] gi|156113869|gb|EDO15409.1| hypothetical protein Kpol_1063p20 [Vanderwaltozyma polyspora DSM 70294] Length = 1171 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNILDAICFVLGISSMATVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|156230203|gb|AAI52522.1| Smc2 protein [Danio rerio] Length = 449 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + E +I F + G NG GKS++ ++I +L + Sbjct: 1 MYIKSIVLEGFKSYAERTEINGFDPFFNAITGLNGSGKSNILDSICFLLGISNLSQVRAT 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|310791633|gb|EFQ27160.1| RecF/RecN/SMC N terminal domain-containing protein [Glomerella graminicola M1.001] Length = 1199 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKEQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|256075737|ref|XP_002574173.1| chondroitin sulfate proteoglycan [Schistosoma mansoni] gi|238659371|emb|CAZ30406.1| Structural maintenance of chromosome 3 (Chondroitin sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) (Mad member-interacting protein 1), putative [Schistosoma mansoni] Length = 1234 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKH 83 +L IE+ +++ + Q I T + G NG GKS+L +AI ++ T RR + Sbjct: 7 RLKYIELENYKSYKGKQVIGPFSVFTAIIGPNGSGKSNLMDAISFVLGENTRHLRVRRLN 66 Query: 84 G 84 Sbjct: 67 D 67 >gi|188533875|ref|YP_001907672.1| hypothetical protein ETA_17370 [Erwinia tasmaniensis Et1/99] gi|188028917|emb|CAO96783.1| Hypothetical protein ETA_17370 [Erwinia tasmaniensis Et1/99] Length = 814 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVN-GQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F++ I +++F+ F+E ++ F DH I+ G NG+GK+++ +AIE G R + D Sbjct: 13 FRIGRIRLTNFKSFSEPLELNFGDHQLIILDGPNGFGKTTIFDAIEISMTGKLLRVRDSD 72 >gi|12851088|dbj|BAB28937.1| unnamed protein product [Mus musculus] gi|26353126|dbj|BAC40193.1| unnamed protein product [Mus musculus] Length = 199 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|296531698|ref|ZP_06894532.1| recombination protein F [Roseomonas cervicalis ATCC 49957] gi|296267973|gb|EFH13766.1| recombination protein F [Roseomonas cervicalis ATCC 49957] Length = 259 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR + ++ + F + ++ G+NG GK++L EAI L G R Sbjct: 7 LRLTRLMLQDFRSYAQLD-LRFQAGVVVIAGRNGVGKTNLLEAISLLTPGRGLRNARAGE 65 Query: 87 IKKRSIKTPMPMCMA 101 + +R + P +A Sbjct: 66 LGRREGEESRPWTIA 80 >gi|255714819|ref|XP_002553691.1| KLTH0E04774p [Lachancea thermotolerans] gi|238935073|emb|CAR23254.1| KLTH0E04774p [Lachancea thermotolerans] Length = 1170 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNILDAICFVLGISSMATVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|221043536|dbj|BAH13445.1| unnamed protein product [Homo sapiens] Length = 516 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|158335965|ref|YP_001517139.1| RecF/RecN/SMC domain-containing protein [Acaryochloris marina MBIC11017] gi|158306206|gb|ABW27823.1| RecF/RecN/SMC N-terminal domain protein, putative [Acaryochloris marina MBIC11017] Length = 913 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++L + + +F+ + EF + G+NG GK+S+ EAI W+ + +++ Sbjct: 1 MEVLSVTLKNFKAHRDRY-YEFRPGANAICGENGSGKTSILEAIAWVLFDHSE 52 >gi|332664151|ref|YP_004446939.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332965|gb|AEE50066.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 420 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 32/48 (66%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ ++ IS+FRGF E K F++H T++ G NG GK+++ + + LF Sbjct: 1 MRIRELTISNFRGFGETVKFPFSEHFTVIAGVNGRGKTAILDGLVLLF 48 >gi|255657907|ref|ZP_05403316.1| putative ABC transporter ATP-binding protein [Mitsuokella multacida DSM 20544] gi|260850099|gb|EEX70106.1| putative ABC transporter ATP-binding protein [Mitsuokella multacida DSM 20544] Length = 673 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 29 LLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +FR F ++F ++T++ G+NG GK++L +A W YG R Sbjct: 6 IKSMTLENFRQFKGESTLDFATDSHKNVTVIMGENGAGKTTLEQAFMWCLYGTNTFRLK 64 >gi|322515803|ref|ZP_08068748.1| recombination protein F [Streptococcus vestibularis ATCC 49124] gi|322125765|gb|EFX97083.1| recombination protein F [Streptococcus vestibularis ATCC 49124] Length = 366 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 1 MWLEKIDIQHFRNYTE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIQFQQNT 67 >gi|312864128|ref|ZP_07724363.1| DNA replication and repair protein RecF [Streptococcus vestibularis F0396] gi|311100360|gb|EFQ58568.1| DNA replication and repair protein RecF [Streptococcus vestibularis F0396] Length = 366 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR +TE + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 1 MWLEKIDIQHFRNYTE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIQFQQNT 67 >gi|300362675|ref|ZP_07058851.1| recombination protein F [Lactobacillus gasseri JV-V03] gi|300353666|gb|EFJ69538.1| recombination protein F [Lactobacillus gasseri JV-V03] Length = 374 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + E+ FR F E++ F H+ I G N GK++L EAI +L + R Sbjct: 1 MYLANFELKDFRNFKELKT-NFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGSK 66 >gi|156408029|ref|XP_001641659.1| predicted protein [Nematostella vectensis] gi|156228799|gb|EDO49596.1| predicted protein [Nematostella vectensis] Length = 1216 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ +F+ + I T + G NG GKS+L +AI ++F T ++K Sbjct: 4 LERLELENFKSYKGNHTIGPFYRFTAIIGPNGCGKSNLMDAISFVFGERTS-SLRVKTVK 62 Query: 89 KRSIKTP 95 P Sbjct: 63 DLIHGAP 69 >gi|312077059|ref|XP_003141137.1| hypothetical protein LOAG_05552 [Loa loa] gi|307763699|gb|EFO22933.1| hypothetical protein LOAG_05552 [Loa loa] Length = 1226 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+ +F+ + Q + T + G NG GKS+L +A+ ++ Sbjct: 3 RLHTLELENFKSYKGNQIVGPFKQFTAIIGPNGSGKSNLMDAMCFVLGE 51 >gi|302406530|ref|XP_003001101.1| chromosome segregation protein sudA [Verticillium albo-atrum VaMs.102] gi|261360359|gb|EEY22787.1| chromosome segregation protein sudA [Verticillium albo-atrum VaMs.102] Length = 1081 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|169850873|ref|XP_001832128.1| cohesin complex subunit psm1 [Coprinopsis cinerea okayama7#130] gi|116506788|gb|EAU89683.1| cohesin complex subunit psm1 [Coprinopsis cinerea okayama7#130] Length = 1243 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ IE+ F+ + Q I + T V G NG GKS+L +AI ++ + + Sbjct: 1 MPLIRIEVCDFKSYRGHQVIGPFSNFTSVIGPNGAGKSNLMDAISFVLGVKSAQ-LRSAQ 59 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 60 LKDLVYRGRR 69 >gi|309356422|emb|CAP37231.2| CBR-DPY-27 protein [Caenorhabditis briggsae AF16] Length = 1575 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + DI + +F+ + ++ F +LT+V G NG GKS++ +A+ ++F G+ +R S+ Sbjct: 100 IQDIIVHNFKSYKGSHQLGPFHKNLTMVMGPNGSGKSNIIDALLFVF-GFKSKRIRAQSL 158 >gi|302897327|ref|XP_003047542.1| condensin complex component SMC1 [Nectria haematococca mpVI 77-13-4] gi|256728473|gb|EEU41829.1| condensin complex component SMC1 [Nectria haematococca mpVI 77-13-4] Length = 1254 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSAH 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLVYR 68 >gi|126340324|ref|XP_001362224.1| PREDICTED: similar to SMC1 protein [Monodelphis domestica] Length = 1233 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGKQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|291407498|ref|XP_002720089.1| PREDICTED: structural maintenance of chromosomes 1A [Oryctolagus cuniculus] Length = 1168 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|294947292|ref|XP_002785315.1| SMC4'SMC4,, putative [Perkinsus marinus ATCC 50983] gi|239899088|gb|EER17111.1| SMC4'SMC4,, putative [Perkinsus marinus ATCC 50983] Length = 1349 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 40/66 (60%), Gaps = 4/66 (6%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++L+ + DI + +F+ + + I F+++ +++ G NG GKS++ +A+ ++F G ++ Sbjct: 364 KRLVIR--DIVLENFKSYGGHKYIGTFSNNFSVIVGPNGSGKSNIIDAMLFVF-GKKAKQ 420 Query: 82 KHGDSI 87 + + Sbjct: 421 IRQNKL 426 >gi|220907659|ref|YP_002482970.1| recombination protein F [Cyanothece sp. PCC 7425] gi|254790473|sp|B8HVF7|RECF_CYAP4 RecName: Full=DNA replication and repair protein recF gi|219864270|gb|ACL44609.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7425] Length = 377 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ +FR + E Q I+FA TI+ GQN GKS+L EA+E L + R Sbjct: 1 MYLKSLQLRYFRNYRE-QVIDFAAPKTILVGQNAQGKSNLLEAVELLSTLRSHRSHRDRE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVLSGQE 66 >gi|164426312|ref|XP_961409.2| hypothetical protein NCU01323 [Neurospora crassa OR74A] gi|157071285|gb|EAA32173.2| hypothetical protein NCU01323 [Neurospora crassa OR74A] Length = 1263 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|11595593|emb|CAC18213.1| related to SMC1 protein [Neurospora crassa] Length = 1241 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|219127758|ref|XP_002184096.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404327|gb|EEC44274.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1213 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I I F+ + +E F H + G NG GKS++ +AI ++ + Sbjct: 1 MFIQEIVIDGFKSYARRTVVEGFDPHFNAITGLNGSGKSNILDAICFVLGITNLSQVRAG 60 Query: 86 SIKKRSIKT 94 ++ + K Sbjct: 61 NLSELVYKQ 69 >gi|320589019|gb|EFX01487.1| cohesin complex subunit [Grosmannia clavigera kw1407] Length = 1925 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E+ +F+ + + F D T V G NG GKS+ +AI ++ G Sbjct: 157 KLNRLELFNFKSYKGHHVLLFGDSYFTSVVGPNGSGKSNSMDAISFVL-GIKSSHLRSSH 215 Query: 87 IKKRSIK 93 +K + Sbjct: 216 LKDLVYR 222 >gi|294658874|ref|XP_002770854.1| DEHA2F20020p [Debaryomyces hansenii CBS767] gi|202953454|emb|CAR66374.1| DEHA2F20020p [Debaryomyces hansenii] Length = 1240 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I F T + G NG GKS++ +AI ++ G + Sbjct: 3 RLVGLELENFKSYRGTSCIGFGTSFFTSIIGPNGAGKSNMMDAISFVL-GVKSSHLRSHN 61 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 62 LKDLIYRGRR 71 >gi|75909597|ref|YP_323893.1| recombination protein F [Anabaena variabilis ATCC 29413] gi|97180310|sp|Q3M7N8|RECF_ANAVT RecName: Full=DNA replication and repair protein recF gi|75703322|gb|ABA22998.1| DNA replication and repair protein RecF [Anabaena variabilis ATCC 29413] Length = 376 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + + QK+EF TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLRHFRNYYD-QKVEFTAAKTILVGNNAQGKSNLLEAVELLATLRSHRMARDRD 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|268571445|ref|XP_002641048.1| C. briggsae CBR-DPY-27 protein [Caenorhabditis briggsae] Length = 1449 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + DI + +F+ + ++ F +LT+V G NG GKS++ +A+ ++F G+ +R S+ Sbjct: 73 IQDIIVHNFKSYKGSHQLGPFHKNLTMVMGPNGSGKSNIIDALLFVF-GFKSKRIRAQSL 131 >gi|323341104|ref|ZP_08081352.1| recombination protein F [Lactobacillus ruminis ATCC 25644] gi|323091525|gb|EFZ34149.1| recombination protein F [Lactobacillus ruminis ATCC 25644] Length = 386 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ +FR + E K+EF+ ++ ++ G+N GK++L E+I L + R + Sbjct: 1 MRLSNLKLKNFRNYHE-TKLEFSPNINVLIGENAQGKTNLLESIYVLAMTKSHRTTNDRE 59 Query: 87 IKKRSIKT 94 + + S K+ Sbjct: 60 LIEFSEKS 67 >gi|254582250|ref|XP_002497110.1| ZYRO0D15642p [Zygosaccharomyces rouxii] gi|238940002|emb|CAR28177.1| ZYRO0D15642p [Zygosaccharomyces rouxii] Length = 1170 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKIEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNVLDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLIYK 68 >gi|255072357|ref|XP_002499853.1| condensin complex component [Micromonas sp. RCC299] gi|226515115|gb|ACO61111.1| condensin complex component [Micromonas sp. RCC299] Length = 1271 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE +F+ + Q I T + G NG GKS+L +AI ++ + + G ++ Sbjct: 23 ISRIECDNFKSYKGHQVIGPFKQFTSIIGPNGSGKSNLMDAISFVLGVQSAQ-LRGTVLR 81 Query: 89 KRSI 92 Sbjct: 82 DLVY 85 >gi|322820745|gb|EFZ27274.1| structural maintenance of chromosome (SMC), putative [Trypanosoma cruzi] Length = 1289 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + + + + + H + G NG GKS++ +A+ ++ +R + Sbjct: 118 MRVKSIVIDGFKSYAHRKALEDLSPHFNAITGLNGSGKSNIFDAVCFVMGITNLKRVRAE 177 Query: 86 SIKKR 90 ++ Sbjct: 178 DPREL 182 >gi|257215854|emb|CAX83079.1| Structural maintenance of chromosomes protein 2 [Schistosoma japonicum] Length = 568 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I F+ + + +I+ F + G NG GKS++ +AI +L Sbjct: 1 MYIKSLVIDGFKSYCQRTEIDGFDPQFNAITGLNGSGKSNILDAICFLLGITNLSHVRAA 60 Query: 86 SIKKRSIK 93 ++ + K Sbjct: 61 NLHELVYK 68 >gi|42740738|gb|AAS44543.1| structural maintenance of chromosome protein 2 [Trypanosoma cruzi] Length = 1172 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + + + + + H + G NG GKS++ +A+ ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKALEDLSPHFNAITGLNGSGKSNIFDAVCFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|71414964|ref|XP_809565.1| structural maintenance of chromosome (SMC) [Trypanosoma cruzi strain CL Brener] gi|70873967|gb|EAN87714.1| structural maintenance of chromosome (SMC), putative [Trypanosoma cruzi] Length = 1172 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I I F+ + + + + + H + G NG GKS++ +A+ ++ +R + Sbjct: 1 MRVKSIVIDGFKSYAHRKALEDLSPHFNAITGLNGSGKSNIFDAVCFVMGITNLKRVRAE 60 Query: 86 SIKKR 90 ++ Sbjct: 61 DPREL 65 >gi|74007448|ref|XP_538049.2| PREDICTED: similar to Structural maintenance of chromosome 1-like 1 protein (SMC1alpha protein) (SB1.8/DXS423E protein) (Sb1.8) [Canis familiaris] Length = 1295 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 66 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 115 >gi|242016837|ref|XP_002428912.1| structural maintenance of chromosomes smc1, putative [Pediculus humanus corporis] gi|212513707|gb|EEB16174.1| structural maintenance of chromosomes smc1, putative [Pediculus humanus corporis] Length = 79 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIELENFKSYKGKQIIGPLKSFTAIIGPNGSGKSNLMDAISFVMGEKT 53 >gi|29336930|sp|Q9CU62|SMC1A_MOUSE RecName: Full=Structural maintenance of chromosomes protein 1A; Short=SMC protein 1A; Short=SMC-1-alpha; Short=SMC-1A; AltName: Full=Chromosome segregation protein SmcB; AltName: Full=Sb1.8 gi|4689088|gb|AAD27753.1|AF047600_1 chromosome segregation protein SmcB [Mus musculus] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|39940504|ref|XP_359789.1| hypothetical protein MGG_04988 [Magnaporthe oryzae 70-15] gi|145010772|gb|EDJ95428.1| hypothetical protein MGG_04988 [Magnaporthe oryzae 70-15] Length = 1204 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKEQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|999380|gb|AAB34405.1| mitosis-specific chromosome segregation protein SMC1 homolog [Homo sapiens] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|315042508|ref|XP_003170630.1| chromosomes protein 1 structural maintenance [Arthroderma gypseum CBS 118893] gi|311344419|gb|EFR03622.1| chromosomes protein 1 structural maintenance [Arthroderma gypseum CBS 118893] Length = 1289 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|30581135|ref|NP_006297.2| structural maintenance of chromosomes protein 1A [Homo sapiens] gi|296235557|ref|XP_002762949.1| PREDICTED: structural maintenance of chromosomes protein 1A [Callithrix jacchus] gi|29336622|sp|Q14683|SMC1A_HUMAN RecName: Full=Structural maintenance of chromosomes protein 1A; Short=SMC protein 1A; Short=SMC-1-alpha; Short=SMC-1A; AltName: Full=Sb1.8 gi|20521836|dbj|BAA11495.2| KIAA0178 [Homo sapiens] gi|57209018|emb|CAI42089.1| structural maintenance of chromosomes 1A [Homo sapiens] gi|57210025|emb|CAI42646.1| structural maintenance of chromosomes 1A [Homo sapiens] gi|85567570|gb|AAI12128.1| SMC1 structural maintenance of chromosomes 1-like 1 [Homo sapiens] gi|119613556|gb|EAW93150.1| SMC1 structural maintenance of chromosomes 1-like 1 (yeast), isoform CRA_b [Homo sapiens] gi|168278535|dbj|BAG11147.1| structural maintenance of chromosomes protein 1A [synthetic construct] gi|313883910|gb|ADR83441.1| structural maintenance of chromosomes 1A [synthetic construct] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|332980608|ref|YP_004462049.1| DNA replication and repair protein RecF [Mahella australiensis 50-1 BON] gi|332698286|gb|AEE95227.1| DNA replication and repair protein RecF [Mahella australiensis 50-1 BON] Length = 363 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++ +R + KI F + + G NG GK+++ EAI G + R Sbjct: 1 MYIKELTLTDYRNYN-NVKINFNIGINVFWGDNGAGKTNILEAIYLTSAGRSHRTSRDKD 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 MIRQGAQ 66 >gi|321260645|ref|XP_003195042.1| nuclear condensin complex protein [Cryptococcus gattii WM276] gi|317461515|gb|ADV23255.1| Nuclear condensin complex protein, putative [Cryptococcus gattii WM276] Length = 1213 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ + F+ + I F + + G NG GKS++ +AI ++ + + Sbjct: 1 MRIEELILDGFKSYPVRTTISGFDESFNAITGLNGSGKSNILDAICFVLGITNMQSVRAN 60 Query: 86 SIKKRSIK 93 ++ K Sbjct: 61 NLMDLIYK 68 >gi|289617716|emb|CBI61439.1| putative SMC1 protein [Sordaria macrospora] Length = 1263 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|301782839|ref|XP_002926833.1| PREDICTED: structural maintenance of chromosomes protein 1A-like [Ailuropoda melanoleuca] gi|281339628|gb|EFB15212.1| hypothetical protein PANDA_016538 [Ailuropoda melanoleuca] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|281204953|gb|EFA79147.1| structural maintenance of chromosome protein [Polysphondylium pallidum PN500] Length = 1217 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+++F+ + I + + G NG GKS+L EAI ++ GY + G + Sbjct: 1 MVIVSLEVNNFKSYKGHHVIGTFKQFSCIIGPNGSGKSNLMEAIIFVL-GYKSSQIRGTN 59 Query: 87 IKKRSIKTPMP 97 + K Sbjct: 60 LTDLIFKPMKE 70 >gi|149031310|gb|EDL86308.1| structural maintenance of chromosomes 1 like 1 (S. cerevisiae), isoform CRA_b [Rattus norvegicus] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|258613892|ref|NP_062684.2| structural maintenance of chromosomes protein 1A [Mus musculus] gi|123220915|emb|CAM23830.1| structural maintenance of chromosomes 1A [Mus musculus] gi|124297187|gb|AAI31668.1| Structural maintenance of chromosomes 1A [Mus musculus] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|13928946|ref|NP_113871.1| structural maintenance of chromosomes protein 1A [Rattus norvegicus] gi|29336527|sp|Q9Z1M9|SMC1A_RAT RecName: Full=Structural maintenance of chromosomes protein 1A; Short=SMC protein 1A; Short=SMC-1A gi|4138416|emb|CAA06377.1| SMC-protein [Rattus norvegicus] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|30172566|ref|NP_777039.1| structural maintenance of chromosomes protein 1A [Bos taurus] gi|311276328|ref|XP_003135172.1| PREDICTED: structural maintenance of chromosomes protein 1A-like [Sus scrofa] gi|29336595|sp|O97593|SMC1A_BOVIN RecName: Full=Structural maintenance of chromosomes protein 1A; Short=SMC protein 1A; Short=SMC-1A gi|4235253|gb|AAD13141.1| SMC1 protein [Bos taurus] gi|296470682|gb|DAA12797.1| structural maintenance of chromosomes protein 1A [Bos taurus] Length = 1233 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|327285298|ref|XP_003227371.1| PREDICTED: structural maintenance of chromosomes protein 2-like [Anolis carolinensis] Length = 1202 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ +F + G NG GKS++ ++I +L + Sbjct: 1 MYIKSIVLEGFKSYAQRTEVNDFDPLFNAITGLNGSGKSNILDSICFLLGITNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|302848078|ref|XP_002955572.1| structural maintenance of chromosomes protein 1 [Volvox carteri f. nagariensis] gi|300259195|gb|EFJ43425.1| structural maintenance of chromosomes protein 1 [Volvox carteri f. nagariensis] Length = 1169 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +E+ +F+ + +I T V G NG GKS+L +AI ++ Sbjct: 12 YIKRLEVENFKSYKGHHRIGPFVSFTAVIGPNGSGKSNLMDAISFVLG 59 >gi|331270253|ref|YP_004396745.1| DNA sulfur modification protein DndD [Clostridium botulinum BKT015925] gi|329126803|gb|AEB76748.1| DNA sulfur modification protein DndD [Clostridium botulinum BKT015925] Length = 719 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I + +FR + + F ++T++ G+NG GKS+L EAI+ YG T G Sbjct: 3 INSITLKNFRSYEDETTFSFTPKDNKNITLIGGENGAGKSTLFEAIKLCIYGPTTYGYLG 62 Query: 85 DS 86 ++ Sbjct: 63 EN 64 >gi|327292781|ref|XP_003231088.1| SMC protein [Trichophyton rubrum CBS 118892] gi|326466718|gb|EGD92171.1| SMC protein [Trichophyton rubrum CBS 118892] Length = 1309 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 40 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 98 Query: 87 IKKRSIK 93 ++ + Sbjct: 99 LRDLVYR 105 >gi|109130919|ref|XP_001091228.1| PREDICTED: structural maintenance of chromosomes protein 1A [Macaca mulatta] Length = 1196 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|148675529|gb|EDL07476.1| structural maintenance of chromosomes 1A, isoform CRA_a [Mus musculus] Length = 1189 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|326482363|gb|EGE06373.1| cohesin complex subunit [Trichophyton equinum CBS 127.97] Length = 1271 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|325187989|emb|CCA22531.1| hypothetical protein CHGG_09697 [Albugo laibachii Nc14] Length = 1386 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 10 CACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSE 68 C ++S TS R +I +++ +F+ + I +I F ++ + V G NG GKS++ + Sbjct: 46 CPNPTQSPTSSSTRLVI---TKMQLENFKSYAGIIEIGPFHNNFSAVVGPNGSGKSNVID 102 Query: 69 AIEWLFYGYTQR 80 A+ ++F + Sbjct: 103 AMLFVFGKRASK 114 >gi|281212226|gb|EFA86386.1| putative non-transporter ABC protein [Polysphondylium pallidum PN500] Length = 1090 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR----- 81 K+ +E+S+F G ++F + ++ G+ G GKSS+ EA+ W YG T R Sbjct: 428 VKITKMELSNFSGVKGDFSVDFNPGMFMIRGKMGVGKSSIFEALVWSLYGSTSPRKSNAT 487 Query: 82 --KHGDSIKKRSIKT 94 GD + S K Sbjct: 488 SSLKGDEVINDSAKQ 502 >gi|254583594|ref|XP_002497365.1| ZYRO0F03828p [Zygosaccharomyces rouxii] gi|238940258|emb|CAR28432.1| ZYRO0F03828p [Zygosaccharomyces rouxii] Length = 1217 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + ++ F D + + G NG GKS++ +AI ++ G Sbjct: 3 RLVGLELYNFKSYRGTVRVGFGDSNFISIIGPNGSGKSNMMDAISFVL-GVKSSHLRSQI 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLIYR 68 >gi|156089495|ref|XP_001612154.1| SMC family, C-terminal domain containing protein [Babesia bovis] gi|154799408|gb|EDO08586.1| SMC family, C-terminal domain containing protein [Babesia bovis] Length = 1346 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+LI + + + +F+ + I F T + G NG GKS++ +A+ ++F G+ ++ Sbjct: 41 RRLI--INKVVLRNFKSYGGTTVIGPFHKRFTSIVGPNGSGKSNVIDAMLFVF-GFRAKQ 97 Query: 82 KHGDSIKKR 90 D + Sbjct: 98 MRFDKLSDL 106 >gi|134287273|ref|YP_001110969.1| ATPase [Heliothis virescens ascovirus 3e] gi|133722181|gb|ABO37303.1| ATPase [Heliothis virescens ascovirus 3e] Length = 885 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +FR F +I FAD +T+++ +G GK+++ +AIE++ Y T G+ Sbjct: 2 KLILENFRIFGTRTEINFADTGVTLLSAPSGTGKTTILDAIEFVLYNSTCHTAAGNYENP 61 Query: 90 RSIKTPMPMCMAVPRCK 106 ++ T + + A R K Sbjct: 62 KTKTTSVTLEHAGIRVK 78 >gi|50286419|ref|XP_445638.1| hypothetical protein [Candida glabrata CBS 138] gi|49524943|emb|CAG58549.1| unnamed protein product [Candida glabrata] Length = 1170 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNILDAICFVLGISSMATVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|229818506|ref|YP_002880032.1| DNA replication and repair protein RecF [Beutenbergia cavernae DSM 12333] gi|259563356|sp|C5BUP6|RECF_BEUC1 RecName: Full=DNA replication and repair protein recF gi|229564419|gb|ACQ78270.1| DNA replication and repair protein RecF [Beutenbergia cavernae DSM 12333] Length = 397 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ ++ FR + ++ I +T G NG GK++L EAI + ++ R GD+ Sbjct: 1 MYVSDLALTDFRSYADLV-IGLEPGITAFVGPNGQGKTNLVEAIGY-LGTFSSHRVSGDA 58 >gi|295672530|ref|XP_002796811.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226282183|gb|EEH37749.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1298 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|46447340|ref|YP_008705.1| putative DNA replication and repair protein recF [Candidatus Protochlamydia amoebophila UWE25] gi|51316228|sp|Q6MAG9|RECF_PARUW RecName: Full=DNA replication and repair protein recF gi|46400981|emb|CAF24430.1| putative DNA replication and repair protein recF [Candidatus Protochlamydia amoebophila UWE25] Length = 359 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + E +EF+ ++ G N GK++L EAI L G + R H Sbjct: 1 MTLRSLYLQHFRNY-EEAYLEFSPQFNLICGPNAKGKTTLLEAIHCLMIGRSFRTSHYPD 59 Query: 87 IKKRSIKT 94 + ++ ++ Sbjct: 60 LIQQQFES 67 >gi|255944913|ref|XP_002563224.1| Pc20g06990 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587959|emb|CAP86028.1| Pc20g06990 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1266 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G ++ Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSNN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|146417278|ref|XP_001484608.1| hypothetical protein PGUG_02337 [Meyerozyma guilliermondii ATCC 6260] Length = 1170 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNILDAICFVLGIASMTTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|77918977|ref|YP_356792.1| DNA repair ATPase [Pelobacter carbinolicus DSM 2380] gi|77545060|gb|ABA88622.1| ATPase involved in DNA repair [Pelobacter carbinolicus DSM 2380] Length = 814 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + + + + + F+ + +++G NG GKS++ EAI + +G R + + Sbjct: 4 IETIHLKNIKSHRD-TTLSFSAGINVLSGPNGVGKSTVFEAIGYALFGVDARDFVSNIER 62 Query: 89 KRSIKTPM 96 SI Sbjct: 63 FLSIGAKR 70 >gi|302839240|ref|XP_002951177.1| structural maintenance of chromosomes protein 4 [Volvox carteri f. nagariensis] gi|300263506|gb|EFJ47706.1| structural maintenance of chromosomes protein 4 [Volvox carteri f. nagariensis] Length = 1239 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + ++ + +F+ + QK+ F + V G NG GKS++ +A+ ++F G + Sbjct: 11 APKQRLMIREMILENFKSYAGEQKVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GRRAK 69 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPR 104 + + + + + + + R Sbjct: 70 QLRFNKVSELIHNSQNHRNLELAR 93 >gi|150391670|ref|YP_001321719.1| SMC domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149951532|gb|ABR50060.1| SMC domain protein [Alkaliphilus metalliredigens QYMF] Length = 985 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I IS+ R F + +I F TI+ NG GK+++ EAIE G + + K GD Sbjct: 4 IHLNKISISNARRFAKDVEINFGKGATILLAPNGTGKTTIFEAIELALSG-SLKSKLGDP 62 Query: 87 IKKRSIKTPMPMCM 100 + + Sbjct: 63 PNALIRDGKKELDI 76 >gi|20808433|ref|NP_623604.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] gi|20517049|gb|AAM25208.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] Length = 549 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +F+ + I F D T++ G NG GK+S+ EAI W G Sbjct: 3 IKSITLKNFKSH-KNTIINFNDKNTVIYGDNGTGKTSIGEAIAWCLTG 49 >gi|225680949|gb|EEH19233.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 1279 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|154483308|ref|ZP_02025756.1| hypothetical protein EUBVEN_01009 [Eubacterium ventriosum ATCC 27560] gi|149735818|gb|EDM51704.1| hypothetical protein EUBVEN_01009 [Eubacterium ventriosum ATCC 27560] Length = 934 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + IS F + E + I+F L ++ G G GK+++ +AI ++ YG + + Sbjct: 1 MRPIKLIISAFGPYAECETIDFEKLGNKGLYLITGDTGAGKTTIFDAITYVLYGKSSGKT 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 RSSSMLRSKYAKP 73 >gi|239052720|ref|NP_001155103.1| structural maintenance of chromosomes protein 1A [Danio rerio] Length = 1232 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T ++ Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTS-NLRVKTL 61 Query: 88 KKRSIKTP 95 K P Sbjct: 62 KDLIHGAP 69 >gi|72163067|ref|YP_290724.1| hypothetical protein Tfu_2668 [Thermobifida fusca YX] gi|71916799|gb|AAZ56701.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 695 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 28 KLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L + + FRG +EF LT++ G+NG GKSS +EA+E G R + Sbjct: 85 YLRRVRVQGFRGIGRAATLEFPPGPGLTVIVGRNGSGKSSFAEAVEAALTG---RNLRWE 141 Query: 86 SI 87 ++ Sbjct: 142 AM 143 >gi|310825639|ref|YP_003957996.1| DNA replication and repair protein RecF [Eubacterium limosum KIST612] gi|308737373|gb|ADO35033.1| DNA replication and repair protein RecF [Eubacterium limosum KIST612] Length = 371 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + H+R + + +EF+ + ++ GQN GK++L E+I L GY+ + Sbjct: 3 LTRLHLVHYRNYRDET-LEFSPGINVICGQNAQGKTNLVESIHLLSRGYSHKTG 55 >gi|224089430|ref|XP_002188956.1| PREDICTED: structural maintenance of chromosomes 2 [Taeniopygia guttata] Length = 1217 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + +I F + G NG GKS++ ++I ++ + Sbjct: 1 MYIKSIVLEGFKSYAQRTEISNFDPLFNAITGLNGSGKSNILDSICFVLGISNLSQVRAS 60 Query: 86 SIKKRSIKT 94 ++ K+ Sbjct: 61 NLHDLIYKS 69 >gi|196005895|ref|XP_002112814.1| hypothetical protein TRIADDRAFT_25837 [Trichoplax adhaerens] gi|190584855|gb|EDV24924.1| hypothetical protein TRIADDRAFT_25837 [Trichoplax adhaerens] Length = 320 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +EI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LTQLEIENFKSYKGKQIIGPFKRFTAIIGPNGSGKSNLMDAICFVLGEKT 53 >gi|7258371|emb|CAB77587.1| structural maintenance of chromosomes (SMC)-like protein [Arabidopsis thaliana] Length = 1265 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|301612084|ref|XP_002935560.1| PREDICTED: structural maintenance of chromosomes protein 1A-like [Xenopus (Silurana) tropicalis] Length = 1232 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|303316059|ref|XP_003068034.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107710|gb|EER25889.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1286 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|48477311|ref|YP_023017.1| chromosome segregation protein [Picrophilus torridus DSM 9790] gi|48429959|gb|AAT42824.1| DNA repair protein Rad50 [Picrophilus torridus DSM 9790] Length = 880 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +F + + +IEF +TI+ G+NG GK+S+ +AI++ + T+ + + + Sbjct: 3 IKSLKLKNFVSY-DDAEIEFTPGITIITGKNGAGKTSIVDAIKFALFTETRNSEKIEEMV 61 Query: 89 KRS 91 K+ Sbjct: 62 KKG 64 >gi|218442160|ref|YP_002380489.1| recombination protein F [Cyanothece sp. PCC 7424] gi|226737786|sp|B7KID4|RECF_CYAP7 RecName: Full=DNA replication and repair protein recF gi|218174888|gb|ACK73621.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7424] Length = 384 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + E Q++ F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTVQLRSFRNYRE-QQVNFESQKTIIVGNNAQGKSNLLEAVELLATLKSHRVSRDRD 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LVLEGATT 67 >gi|47228706|emb|CAG07438.1| unnamed protein product [Tetraodon nigroviridis] Length = 1277 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T ++ Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAERTS-NLRVKTL 61 Query: 88 KKRSIKTP 95 K P Sbjct: 62 KDLIHGAP 69 >gi|326475369|gb|EGD99378.1| SMC protein [Trichophyton tonsurans CBS 112818] Length = 1260 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|296807506|ref|XP_002844217.1| mitotic cohesin complex subunit Psm1 [Arthroderma otae CBS 113480] gi|238843700|gb|EEQ33362.1| mitotic cohesin complex subunit Psm1 [Arthroderma otae CBS 113480] Length = 1281 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|269860020|ref|XP_002649733.1| chromosome segregation protein SMC1 [Enterocytozoon bieneusi H348] gi|220066792|gb|EED44263.1| chromosome segregation protein SMC1 [Enterocytozoon bieneusi H348] Length = 1062 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +LL I++ +F+ + I D T + G NG GKS++ +AI + Sbjct: 1 MQLLKIQVRNFKSYKGKHTIGPFDKFTCIIGPNGSGKSNILDAISFA 47 >gi|164657177|ref|XP_001729715.1| hypothetical protein MGL_3259 [Malassezia globosa CBS 7966] gi|159103608|gb|EDP42501.1| hypothetical protein MGL_3259 [Malassezia globosa CBS 7966] Length = 1169 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + ++I F+ F + I F+ L +V G+NG GKS+ AI ++ Sbjct: 1 MFIKALKIHGFKSFRDADSITSFSPGLNVVVGRNGSGKSNFFAAIRFVLG 50 >gi|153811990|ref|ZP_01964658.1| hypothetical protein RUMOBE_02383 [Ruminococcus obeum ATCC 29174] gi|149831889|gb|EDM86975.1| hypothetical protein RUMOBE_02383 [Ruminococcus obeum ATCC 29174] Length = 362 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ +FR + ++Q ++F I G N GK+++ E++ + + Sbjct: 1 MYIESIELKNFRNYQDLQ-LDFDKGTNIFYGDNAQGKTNILESVYICGTTKSHKGSKDKE 59 Query: 87 IKKRSIK 93 I + + Sbjct: 60 IIRFGEE 66 >gi|148232365|ref|NP_001080490.1| structural maintenance of chromosomes 1A [Xenopus laevis] gi|28436771|gb|AAH46691.1| Smc1l1 protein [Xenopus laevis] Length = 1232 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|332645744|gb|AEE79265.1| structural maintenance of chromosomes 1 [Arabidopsis thaliana] Length = 1239 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|320449872|ref|YP_004201968.1| exonuclease SbcC [Thermus scotoductus SA-01] gi|320150041|gb|ADW21419.1| exonuclease SbcC [Thermus scotoductus SA-01] Length = 976 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +E+ F + E Q ++F+D L + G G GKS+L +A+ + YG R Sbjct: 1 MRPLRLELEGFGPYRERQGVDFSDVELFAITGPTGSGKSTLLDAMAFALYGVVPRVGR 58 >gi|307298907|ref|ZP_07578709.1| SMC domain protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915332|gb|EFN45717.1| SMC domain protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 945 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I++ +FR + + F + ++ G+NG GKSS+ EAI +G R K D+ Sbjct: 1 MRVTSIDLENFRSHSRYSE-TFEKGINLILGRNGSGKSSIIEAIGLALFGGGLRDKQEDA 59 Query: 87 IK 88 IK Sbjct: 60 IK 61 >gi|79444781|ref|NP_191027.3| TTN8 (TITAN8); ATP binding / transporter [Arabidopsis thaliana] gi|332645742|gb|AEE79263.1| structural maintenance of chromosomes 1 [Arabidopsis thaliana] Length = 1238 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|68481803|ref|XP_715143.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] gi|68481906|ref|XP_715092.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] gi|46436700|gb|EAK96058.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] gi|46436753|gb|EAK96110.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] Length = 1240 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I F T + G NG GKS++ +AI ++ + + Sbjct: 3 RLIGLELFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSY-HLRSQN 61 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 62 LKDLIYRGRR 71 >gi|298490844|ref|YP_003721021.1| DNA replication and repair protein RecF ['Nostoc azollae' 0708] gi|298232762|gb|ADI63898.1| DNA replication and repair protein RecF ['Nostoc azollae' 0708] Length = 371 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + QKIEF TI+ G N GKS+ EA+E L + R Sbjct: 1 MYLKTLHLRQFRNYQD-QKIEFTAPKTILVGNNAQGKSNFLEAVELLATLRSHRLARDHD 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRDG 64 >gi|241958420|ref|XP_002421929.1| chromosomal ATPase, putative; structural maintenance of chromosomes protein, putative; subunit of the multiprotein cohesin complex, putative [Candida dubliniensis CD36] gi|223645274|emb|CAX39930.1| chromosomal ATPase, putative [Candida dubliniensis CD36] Length = 1240 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I F T + G NG GKS++ +AI ++ + + Sbjct: 3 RLIGLELFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSY-HLRSQN 61 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 62 LKDLIYRGRR 71 >gi|145347925|ref|XP_001418410.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578639|gb|ABO96703.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1224 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ARK + + + +F+ + Q + F + V G NG GKS++ +A+ ++F G + Sbjct: 9 ARKPRLAIKKMVLENFKSYAGAQHVGPFHKSFSSVVGPNGSGKSNVIDAMMFVF-GKRAK 67 Query: 81 RKH 83 + Sbjct: 68 QLR 70 >gi|71983209|gb|AAZ57432.1| structural maintenance of chromosome 4 [Toxoplasma gondii] Length = 1479 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 RK + + + + +F+ + + + I F T + G NG GKS++ +A+ ++F Sbjct: 149 RKRLM-IERVVLENFKSYGKKKTIGPFHKRFTAIVGPNGSGKSNVIDAMLFVFG 201 >gi|17230866|ref|NP_487414.1| recombination protein F [Nostoc sp. PCC 7120] gi|20978593|sp|Q8YRR9|RECF_ANASP RecName: Full=DNA replication and repair protein recF gi|17132469|dbj|BAB75073.1| DNA repair and genetic recombination protein [Nostoc sp. PCC 7120] Length = 376 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + + HFR + + QK+EF TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLRHFRNYYD-QKVEFTAAKTILVGNNAQGKSNLLEAVELLATLRSHRMARD 57 >gi|190346209|gb|EDK38239.2| hypothetical protein PGUG_02337 [Meyerozyma guilliermondii ATCC 6260] Length = 1170 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISDWDPQFNAITGLNGSGKSNILDAICFVLGIASMTTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|164686443|ref|ZP_02210471.1| hypothetical protein CLOBAR_00008 [Clostridium bartlettii DSM 16795] gi|164604454|gb|EDQ97919.1| hypothetical protein CLOBAR_00008 [Clostridium bartlettii DSM 16795] Length = 371 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ +FR + + + F ++ ++ G+NG GK+++ EAI L +G + R Sbjct: 1 MRLNNLQLINFRNY-DNLHLNFKRNINLLVGKNGQGKTNIVEAIYMLSFGKSFRTNKDKE 59 Query: 87 IKKRSIK 93 I K + Sbjct: 60 IIKFGSE 66 >gi|74177551|dbj|BAB31016.3| unnamed protein product [Mus musculus] Length = 301 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|289063426|ref|NP_001165905.1| structural maintenance of chromosomes protein 1A [Xenopus laevis] gi|29336591|sp|O93308|SMC1A_XENLA RecName: Full=Structural maintenance of chromosomes protein 1A; Short=SMC protein 1A; Short=SMC-1A; Short=xSMC1 gi|3328231|gb|AAC26807.1| 14S cohesin SMC1 subunit [Xenopus laevis] Length = 1232 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|312887308|ref|ZP_07746910.1| SMC domain protein [Mucilaginibacter paludis DSM 18603] gi|311300204|gb|EFQ77271.1| SMC domain protein [Mucilaginibacter paludis DSM 18603] Length = 622 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EWLFYGYTQR 80 +I KL IEI +FRG + IE D L + G NG GKS++ ++I WL ++ Sbjct: 1 MIMKLERIEIKNFRGIEDAT-IELNDQLNLFVGINGSGKSTILDSIVISLSWLVARIQRQ 59 Query: 81 RKHGDSIKKRSIKTPMPM 98 G I +SIK P Sbjct: 60 NAPGKPITLQSIKNDTPF 77 >gi|227508131|ref|ZP_03938180.1| recombination protein F [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192360|gb|EEI72427.1| recombination protein F [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 373 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL DI + +FR + + Q ++F+D + + G+N GK++L EAI L + R + Sbjct: 1 MKLKDISLHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAIYVLALTRSHRTSNEKE 59 Query: 87 IKKRSIKT 94 + +T Sbjct: 60 LINWQSQT 67 >gi|149928193|ref|ZP_01916438.1| Chromosome segregation protein SMC [Limnobacter sp. MED105] gi|149823084|gb|EDM82324.1| Chromosome segregation protein SMC [Limnobacter sp. MED105] Length = 1154 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +L V G NG GKS++ +A+ W+ G+S++ Sbjct: 4 NLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESMQD 42 >gi|49618927|gb|AAT68048.1| chromosome adhesion protein SMC1-like [Danio rerio] Length = 1233 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T ++ Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTS-NLRVKTL 61 Query: 88 KKRSIKTP 95 K P Sbjct: 62 KDLIHGAP 69 >gi|17552844|ref|NP_497771.1| DumPY : shorter than wild-type family member (dpy-27) [Caenorhabditis elegans] gi|1352297|sp|P48996|DPY27_CAEEL RecName: Full=Chromosome condensation protein dpy-27; AltName: Full=Protein dumpy-27 gi|529385|gb|AAA62647.1| chromosome condensation protein [Caenorhabditis elegans] gi|3879216|emb|CAA84669.1| C. elegans protein R13G10.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1469 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+I + +F+ + + F +LT++ G NG GKS++ +A+ ++F Sbjct: 93 ILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFG 140 >gi|302669378|ref|YP_003829338.1| DNA replication and repair protein RecF [Butyrivibrio proteoclasticus B316] gi|302393851|gb|ADL32756.1| DNA replication and repair protein RecF [Butyrivibrio proteoclasticus B316] Length = 372 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E++ FR + E KI+F+ I+ G N GK+++ EAI + + I Sbjct: 3 IKSLELADFRNY-ENVKIDFSSGTNILYGDNAQGKTNILEAIFVSATTKSHKGSKDKEII 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGKD 66 >gi|302391435|ref|YP_003827255.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] gi|302203512|gb|ADL12190.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] Length = 684 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSEAIEWLFYG--- 76 K+ DIE+ +F+ + Q IEF ++++T+V G+NG GK+SL A+ + YG Sbjct: 1 MKIKDIELCNFKQYYGKQNIEFAGYDTDSSENVTVVYGENGRGKTSLYRALMFALYGDKF 60 Query: 77 -YTQRRKHGDSIKKRSIK 93 + G K + Sbjct: 61 LDQDKNLQGSRNKDLNPD 78 >gi|238879829|gb|EEQ43467.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1240 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I F T + G NG GKS++ +AI ++ + + Sbjct: 3 RLIGLELFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSY-HLRSQN 61 Query: 87 IKKRSIKTPM 96 +K + Sbjct: 62 LKDLIYRGRR 71 >gi|213404596|ref|XP_002173070.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces japonicus yFS275] gi|212001117|gb|EEB06777.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces japonicus yFS275] Length = 1232 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + Q I F D T + G NG GKS+L +AI ++ G + Sbjct: 3 RLVRLEVENFKSYRGFQVIGPFYD-FTSIIGPNGAGKSNLMDAISFVV-GIKSSHLRSSN 60 Query: 87 IKKRSIK 93 +K + Sbjct: 61 LKDLIYR 67 >gi|269926979|ref|YP_003323602.1| SMC domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269790639|gb|ACZ42780.1| SMC domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 1021 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+L + +++ + + + IEF ++G+NG GK+++ EAI W + Sbjct: 1 MKILKLHLTNIKSY-DNTTIEFEPGTNSIHGENGAGKTTILEAIGWALF 48 >gi|91216544|ref|ZP_01253510.1| ATPase involved in DNA repair [Psychroflexus torquis ATCC 700755] gi|91185338|gb|EAS71715.1| ATPase involved in DNA repair [Psychroflexus torquis ATCC 700755] Length = 700 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K ++EI++FR + + KI+ ++ ++ G+NGYGK++ ++ W YG + Sbjct: 1 MKFSNVEINNFRQYYDKVKIDLTTSTDQNIILIGGKNGYGKTNFLISVVWCLYGKLIEKV 60 Query: 83 HGDSIKKRSIKTP 95 D+ K+ K Sbjct: 61 -DDNFKQEIRKEK 72 >gi|45594277|gb|AAS68515.1| structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] Length = 1218 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|327348439|gb|EGE77296.1| cohesin complex subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1270 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAFFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|320032397|gb|EFW14350.1| cohesin complex subunit Psm1 [Coccidioides posadasii str. Silveira] Length = 1261 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|261205002|ref|XP_002627238.1| cohesin complex subunit [Ajellomyces dermatitidis SLH14081] gi|239592297|gb|EEQ74878.1| cohesin complex subunit [Ajellomyces dermatitidis SLH14081] Length = 1260 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAFFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|227523342|ref|ZP_03953391.1| recombination protein F [Lactobacillus hilgardii ATCC 8290] gi|227089448|gb|EEI24760.1| recombination protein F [Lactobacillus hilgardii ATCC 8290] Length = 373 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L DI + +FR + + Q ++F+D + + G+N GK++L EAI L + R + Sbjct: 1 MRLKDIALHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAIYVLALTRSHRTSNEKE 59 Query: 87 IKKRSIKT 94 + +T Sbjct: 60 LINWQSQT 67 >gi|227511155|ref|ZP_03941204.1| recombination protein F [Lactobacillus buchneri ATCC 11577] gi|227085637|gb|EEI20949.1| recombination protein F [Lactobacillus buchneri ATCC 11577] Length = 373 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L DI + +FR + + Q ++F+D + + G+N GK++L EAI L + R + Sbjct: 1 MRLKDIALHNFRNYID-QTLQFSDGINVFLGENAQGKTNLLEAIYVLALTRSHRTSNEKE 59 Query: 87 IKKRSIKT 94 + +T Sbjct: 60 LINWQSQT 67 >gi|86143164|ref|ZP_01061566.1| hypothetical protein MED217_08280 [Leeuwenhoekiella blandensis MED217] gi|85830069|gb|EAQ48529.1| hypothetical protein MED217_08280 [Leeuwenhoekiella blandensis MED217] Length = 700 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +I+I++FR + I+ ++ ++ G+NGYGK++L +I W YG + Sbjct: 1 MKFSNIKINNFRQYYNAVNIDLTTDTDRNIVVIGGRNGYGKTNLLLSIVWCLYGEKISQI 60 Query: 83 HGDSIKKRSIKTP 95 D+ KK K Sbjct: 61 -DDNFKKEIQKEK 72 >gi|117938776|gb|AAH03279.1| Smc1a protein [Mus musculus] gi|118599981|gb|AAH25590.1| Smc1a protein [Mus musculus] Length = 679 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|297196732|ref|ZP_06914130.1| exonuclease SbcC [Streptomyces pristinaespiralis ATCC 25486] gi|197720095|gb|EDY64003.1| exonuclease SbcC [Streptomyces pristinaespiralis ATCC 25486] Length = 1117 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +E++ F GF ++F + + G G GKS++ +A+ + YG R + Sbjct: 1 MRPVRLELNGFAGFRAPTVVDFTNADYFALVGPTGSGKSTVLDALTFALYGSAYRWGRSN 60 Query: 86 SI 87 +I Sbjct: 61 AI 62 >gi|126458979|ref|YP_001055257.1| SMC domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248700|gb|ABO07791.1| SMC domain protein [Pyrobaculum calidifontis JCM 11548] Length = 700 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---- 84 + +E+ +F+ +F + + V G NG GK+SL EA+ +G RK G Sbjct: 2 IKRLEVVNFKAHA-RAVFKFGEGVNFVYGPNGSGKTSLMEAVAVALFGSQWVRKVGGKWA 60 Query: 85 DSIKKRSIKTPMPMCM 100 D +++ S + + + Sbjct: 61 DFLRRGSPHGEVKLTL 76 >gi|3098266|gb|AAC15582.1| mitosis-specific chromosome segregation protein SMC1 homolog [Takifugu rubripes] Length = 1233 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T ++ Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAERTS-NLRVKTL 61 Query: 88 KKRSIKTP 95 K P Sbjct: 62 KDLIHGAP 69 >gi|228909107|ref|ZP_04072936.1| hypothetical protein bthur0013_32620 [Bacillus thuringiensis IBL 200] gi|228850615|gb|EEM95440.1| hypothetical protein bthur0013_32620 [Bacillus thuringiensis IBL 200] Length = 966 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ IE+ FRGF + ++ + + ++ G NG+GKSS+ +AIEW G R Sbjct: 1 MKITSIELQAFRGFNKKEEFCLENVDVIVLYGPNGHGKSSIYDAIEWGLTGGIYR 55 >gi|167761257|ref|ZP_02433384.1| hypothetical protein CLOSCI_03662 [Clostridium scindens ATCC 35704] gi|167660923|gb|EDS05053.1| hypothetical protein CLOSCI_03662 [Clostridium scindens ATCC 35704] Length = 1059 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K + + +S F + E+ I+F L ++ G G GK+++ +AI + Y T Sbjct: 1 MKPIRLVMSAFGSYAEVTTIDFQGVQQGLFLITGDTGSGKTTIFDAITYALYDQTSGGAR 60 Query: 84 GDSIKKRSIKTP 95 ++ + + Sbjct: 61 DGNMMRSQYASE 72 >gi|313885421|ref|ZP_07819171.1| DNA replication and repair protein RecF [Eremococcus coleocola ACS-139-V-Col8] gi|312619151|gb|EFR30590.1| DNA replication and repair protein RecF [Eremococcus coleocola ACS-139-V-Col8] Length = 327 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I +SH+R ++ +Q +E D LTI+ G N GK++L EAI L + R H Sbjct: 1 MKLKSIHLSHYRNYSNLQ-LELNDGLTILVGNNAQGKTNLLEAIFLLSVTKSHRTNHDQE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIQWGQD 66 >gi|268678674|ref|YP_003303105.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268616705|gb|ACZ11070.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 440 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ IEI +F+ F + + F +H ++ G NG GKSSL A+ G+ D Sbjct: 1 MRIDKIEIENFKLF-DKVEFSFNEHFNLIIGINGSGKSSLLRALAVALGGWANAYIKDD 58 >gi|47213556|emb|CAF91830.1| unnamed protein product [Tetraodon nigroviridis] Length = 1110 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + +I F + G NG GKS++ ++I +L Sbjct: 1 MHIKSIIIEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTHVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|86606664|ref|YP_475427.1| recombination protein F [Synechococcus sp. JA-3-3Ab] gi|97181044|sp|Q2JQG8|RECF_SYNJA RecName: Full=DNA replication and repair protein recF gi|86555206|gb|ABD00164.1| DNA replication and repair protein RecF [Synechococcus sp. JA-3-3Ab] Length = 380 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + + QKI F TI+ G+N GK++L EA+E L ++R Sbjct: 1 MYLRFLHLWHFRNYRD-QKISFEAPKTILVGENAQGKTNLLEAVELLATLRSRRAGRDRE 59 Query: 87 IKKRSIKTPM 96 + ++ + Sbjct: 60 LVQQGAEKAR 69 >gi|134111681|ref|XP_775376.1| hypothetical protein CNBE0920 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258035|gb|EAL20729.1| hypothetical protein CNBE0920 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1541 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQN 59 +T LR +T A + K + + + +F+ + Q+I F + + G N Sbjct: 218 VTPLRSPHTSAPAPAPRPAQSGPKSRLTIHKLVLVNFKSYAGRQEIGPFHKSFSAIVGPN 277 Query: 60 GYGKSSLSEAIEWLFYGYTQRRKHG 84 G GKS+ +A+ ++F + + G Sbjct: 278 GSGKSNTIDALLFVFGYRASKMRQG 302 >gi|255722029|ref|XP_002545949.1| hypothetical protein CTRG_00730 [Candida tropicalis MYA-3404] gi|240136438|gb|EER35991.1| hypothetical protein CTRG_00730 [Candida tropicalis MYA-3404] Length = 1253 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I F T + G NG GKS++ +AI ++ + + Sbjct: 3 RLIGLELYNFKSYKGKSVIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSY-HLRSHN 61 Query: 87 IKKRSIK----TPMP 97 +K + TP P Sbjct: 62 LKDLIYRGRKSTPTP 76 >gi|58268024|ref|XP_571168.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227402|gb|AAW43861.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1540 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQN 59 +T LR +T A + K + + + +F+ + Q+I F + + G N Sbjct: 218 VTPLRSPHTSAPAPAPRPAQSGPKSRLTIHKLVLVNFKSYAGRQEIGPFHKSFSAIVGPN 277 Query: 60 GYGKSSLSEAIEWLFYGYTQRRKHG 84 G GKS+ +A+ ++F + + G Sbjct: 278 GSGKSNTIDALLFVFGYRASKMRQG 302 >gi|326430299|gb|EGD75869.1| hypothetical protein PTSG_07983 [Salpingoeca sp. ATCC 50818] Length = 1206 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + E +E F+ H ++ G+NG GKS+ AI ++ Sbjct: 1 MHIKRVTIKGFRSYREQTFVEPFSPHHNVIVGRNGSGKSNFFFAIRFVL 49 >gi|149031309|gb|EDL86307.1| structural maintenance of chromosomes 1 like 1 (S. cerevisiae), isoform CRA_a [Rattus norvegicus] Length = 1001 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|74095929|ref|NP_001027796.1| SMC2 protein [Takifugu rubripes] gi|27805179|emb|CAD58848.2| SMC2 protein [Takifugu rubripes] Length = 1200 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + +I F + G NG GKS++ ++I +L Sbjct: 1 MHIKSIILEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSHVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|50556870|ref|XP_505843.1| YALI0F24783p [Yarrowia lipolytica] gi|49651713|emb|CAG78654.1| YALI0F24783p [Yarrowia lipolytica] Length = 1172 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ T Sbjct: 1 MKVEELVIDGFKSYATRTVISGWDPQFNCITGLNGSGKSNILDAICFVLGITTMATVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|116207744|ref|XP_001229681.1| hypothetical protein CHGG_03165 [Chaetomium globosum CBS 148.51] gi|88183762|gb|EAQ91230.1| hypothetical protein CHGG_03165 [Chaetomium globosum CBS 148.51] Length = 1169 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|322799968|gb|EFZ21094.1| hypothetical protein SINV_13550 [Solenopsis invicta] Length = 111 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L IEIS+F+ F I + G NG GKS++ +AI + Sbjct: 4 LNTIEISNFKSFKGKTVISPIPRFLAIIGPNGSGKSNIMDAISFALGE 51 >gi|58270030|ref|XP_572171.1| nuclear condensin complex protein [Cryptococcus neoformans var. neoformans JEC21] gi|57228407|gb|AAW44864.1| nuclear condensin complex protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1215 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ + F+ + I F + + G NG GKS++ +AI ++ + + Sbjct: 1 MRVEELILDGFKSYPVRTTISGFDESFNAITGLNGSGKSNILDAICFVLGITNMQSVRAN 60 Query: 86 SIKKRSIK 93 ++ K Sbjct: 61 NLMDLIYK 68 >gi|325117816|emb|CBZ53367.1| putative chromosome condensation protein [Neospora caninum Liverpool] Length = 1574 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 RK + + + + +F+ + + + I F T + G NG GKS++ +A+ ++F Sbjct: 139 RKRLM-IERVVLENFKSYGKKKTIGPFHKRFTAIVGPNGSGKSNVIDAMLFVFG 191 >gi|300123990|emb|CBK25261.2| unnamed protein product [Blastocystis hominis] Length = 1201 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MYLEEIILDGFKSYANRTVISGFDSKFNAITGLNGSGKSNILDAICFVLGITNLSQVRVK 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|282900535|ref|ZP_06308479.1| Exonuclease SbcC [Cylindrospermopsis raciborskii CS-505] gi|281194588|gb|EFA69541.1| Exonuclease SbcC [Cylindrospermopsis raciborskii CS-505] Length = 1005 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + ++F H + G NG GKSSL E+I W +G ++ D I Sbjct: 5 RLILKNFLSYRDAT-LDFTGLHTACICGPNGAGKSSLLESITWAIWGQSRANIEDDVIYA 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 S + + KY++ Sbjct: 64 GSQEVRVDFTFYNNSQKYRV 83 >gi|218296446|ref|ZP_03497189.1| SMC domain protein [Thermus aquaticus Y51MC23] gi|218243240|gb|EED09771.1| SMC domain protein [Thermus aquaticus Y51MC23] Length = 962 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L +E+ F + E Q ++F+D L + G G GKS+L +A+ + YG R Sbjct: 1 MRPLRLELEGFGPYREKQGVDFSDVELFAITGPTGSGKSTLLDAMAFALYGLVPR 55 >gi|47086417|ref|NP_997975.1| structural maintenance of chromosomes 1A, like [Danio rerio] gi|44890312|gb|AAH66674.1| Structural maintenance of chromosomes 1A [Danio rerio] Length = 285 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T ++ Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTS-NLRVKTL 61 Query: 88 KKRSIKTP 95 K P Sbjct: 62 KDLIHGAP 69 >gi|317027943|ref|XP_001400318.2| subunit of the multiprotein cohesin complex [Aspergillus niger CBS 513.88] Length = 1238 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|221488726|gb|EEE26940.1| structural maintenance of chromosomes smc4, putative [Toxoplasma gondii GT1] Length = 1644 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 RK + + + + +F+ + + + I F T + G NG GKS++ +A+ ++F Sbjct: 149 RKRLM-IERVVLENFKSYGKKKTIGPFHKRFTAIVGPNGSGKSNVIDAMLFVFG 201 >gi|242822652|ref|XP_002487931.1| cohesin complex subunit (Psm1), putative [Talaromyces stipitatus ATCC 10500] gi|218712852|gb|EED12277.1| cohesin complex subunit (Psm1), putative [Talaromyces stipitatus ATCC 10500] Length = 1265 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLVRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLVYR 68 >gi|84999442|ref|XP_954442.1| SMC (structural maintenance of chromosome) protein (type 1) [Theileria annulata] gi|65305440|emb|CAI73765.1| SMC (structural maintenance of chromosome) protein (type 1), putative [Theileria annulata] Length = 1299 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +F+ + I+ V G NG GKS+L +AI ++ T G +++ Sbjct: 74 IHAIELHNFKSYFGTVLIDKFASFNAVIGPNGSGKSNLMDAISFVLCIRTS-TLRGSNLR 132 Query: 89 KRSIKTPMP 97 K P P Sbjct: 133 DLINKVPDP 141 >gi|219113225|ref|XP_002186196.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583046|gb|ACI65666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1356 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +E+ +F+ + ++ I F + V G NG GKS++ +A+ ++F G ++ + + Sbjct: 39 ISKMELENFKSYAGVKTIGPFHKCFSAVVGPNGSGKSNVIDAMLFVF-GKRAKKLRLNKV 97 Query: 88 KKRSIKTP 95 + K+ Sbjct: 98 SELIHKSQ 105 >gi|196250345|ref|ZP_03149038.1| SMC domain protein [Geobacillus sp. G11MC16] gi|196210234|gb|EDY05000.1| SMC domain protein [Geobacillus sp. G11MC16] Length = 629 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I FR F E +I LT++ G+NG GKS++ +AI + Sbjct: 1 MHLSKLVIEGFRCFNEKAEIPLNKGLTVILGENGSGKSAIVDAIRLIL 48 >gi|5541713|emb|CAB51218.1| chromosome-associated protein-E homolog (fragment) [Arabidopsis thaliana] Length = 317 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|85703697|ref|ZP_01034801.1| hypothetical protein ROS217_23187 [Roseovarius sp. 217] gi|85672625|gb|EAQ27482.1| hypothetical protein ROS217_23187 [Roseovarius sp. 217] Length = 674 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKHG 84 + ++ + +FR F + + I +T G NG GK+++ +A++ LF + +R Sbjct: 1 MYIRELRLKNFRCFGDHEEVISLDPEMTAFIGDNGSGKTTVLKALQRLFGSTSNERSLRR 60 Query: 85 DSIKKRSIKTPMPMC 99 D + + + P P Sbjct: 61 DDVHFGAGEVPGPAN 75 >gi|310830919|ref|YP_003966020.1| ATPase involved in DNA repair [Paenibacillus polymyxa SC2] gi|309250386|gb|ADO59952.1| ATPase involved in DNA repair [Paenibacillus polymyxa SC2] Length = 700 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L+ +++ FRGF + I F G NG GKSS+ E + W+ G K + Sbjct: 10 LIQLIKVQVQGFRGFKDTVTIPFDLGKNEFLGDNGKGKSSIGELLAWIMTGRNIAGKQKE 69 >gi|134113643|ref|XP_774556.1| hypothetical protein CNBG0520 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257196|gb|EAL19909.1| hypothetical protein CNBG0520 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1215 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ + F+ + I F + + G NG GKS++ +AI ++ + + Sbjct: 1 MRVEELILDGFKSYPVRTTISGFDESFNAITGLNGSGKSNILDAICFVLGITNMQSVRAN 60 Query: 86 SIKKRSIK 93 ++ K Sbjct: 61 NLMDLIYK 68 >gi|212546681|ref|XP_002153494.1| cohesin complex subunit (Psm1), putative [Penicillium marneffei ATCC 18224] gi|210065014|gb|EEA19109.1| cohesin complex subunit (Psm1), putative [Penicillium marneffei ATCC 18224] Length = 1265 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLVRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLVYR 68 >gi|325478751|gb|EGC81862.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 1144 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 55 VNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---DSIKKRSIKTPMPMCMA 101 + G NG GKS++S+AI W+ + + G D + + + + +A Sbjct: 1 MVGPNGSGKSNISDAIRWVLGEQSAKSLRGNKMDDVIFQGGENSKSLNLA 50 >gi|300124053|emb|CBK25324.2| unnamed protein product [Blastocystis hominis] Length = 1199 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MYLEEIILDGFKSYANRTVISGFDSKFNAITGLNGSGKSNILDAICFVLGITNLSQVRVK 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|223983626|ref|ZP_03633804.1| hypothetical protein HOLDEFILI_01085 [Holdemania filiformis DSM 12042] gi|223964393|gb|EEF68727.1| hypothetical protein HOLDEFILI_01085 [Holdemania filiformis DSM 12042] Length = 368 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + +FR + Q I H+ ++ G+N GK++L E+I L + R Sbjct: 1 MKINQIRLKNFRNYDSCQFIP-DPHMNVIIGKNAQGKTNLLESIVLLSTTRSHRAVRDQD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 MIREGQD 66 >gi|164423946|ref|XP_957879.2| hypothetical protein NCU07554 [Neurospora crassa OR74A] gi|157070300|gb|EAA28643.2| hypothetical protein NCU07554 [Neurospora crassa OR74A] Length = 1117 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MHIKQIIIQGFKSYKEQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|158257274|dbj|BAF84610.1| unnamed protein product [Homo sapiens] Length = 842 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|320588084|gb|EFX00559.1| chromosome segregation protein [Grosmannia clavigera kw1407] Length = 1209 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + I F+ + + +E F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQLIIQGFKSYKDQTVMEPFSPGTNVIVGRNGSGKSNFFAAIRFVLG 50 >gi|237837441|ref|XP_002368018.1| chromosome condensation protein, putative [Toxoplasma gondii ME49] gi|211965682|gb|EEB00878.1| chromosome condensation protein, putative [Toxoplasma gondii ME49] gi|221509219|gb|EEE34788.1| SMC protein, putative [Toxoplasma gondii VEG] Length = 1640 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 RK + + + + +F+ + + + I F T + G NG GKS++ +A+ ++F Sbjct: 149 RKRLM-IERVVLENFKSYGKKKTIGPFHKRFTAIVGPNGSGKSNVIDAMLFVFG 201 >gi|253681218|ref|ZP_04862016.1| DNA replication and repair protein RecF [Clostridium botulinum D str. 1873] gi|253562456|gb|EES91907.1| DNA replication and repair protein RecF [Clostridium botulinum D str. 1873] Length = 360 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +FR + E +EF++ + + G N GK+++ E+I + G + R Sbjct: 1 MYIKNLQLVNFRNY-ENLVLEFSEGINVFIGNNAQGKTNILESIYYCSIGKSHRTNKDKE 59 Query: 87 IKKRSIK 93 + K K Sbjct: 60 LIKWGSK 66 >gi|33338074|gb|AAQ13659.1|AF176781_1 MSTP142 [Homo sapiens] Length = 205 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|227824925|ref|ZP_03989757.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905424|gb|EEH91342.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 757 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + F + + + I+F L ++ G G GK+++ +A+ + YG Sbjct: 1 MKPRRLMMQAFGPYADKETIDFTVLKNHQLFLITGPTGSGKTTILDAMTFALYGTASGDL 60 Query: 83 HGDSIKKRSIKTPM 96 + + +P Sbjct: 61 RENRSLRSDYASPK 74 >gi|291546963|emb|CBL20071.1| hypothetical protein CK1_20480 [Ruminococcus sp. SR1/5] Length = 415 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + IS F + + +I+F+ L ++ G G GK+++ +AI + YG Sbjct: 1 MRPEKLTISAFGPYADKTEIDFSKLGEGGLYLITGDTGAGKTTIFDAITFALYGRASGEV 60 Query: 83 HGDSIKKRSI 92 ++ + Sbjct: 61 RESAMFRSKY 70 >gi|94984930|ref|YP_604294.1| SMC protein-like protein [Deinococcus geothermalis DSM 11300] gi|94555211|gb|ABF45125.1| SbcC, ATPase involved in DNA repair [Deinococcus geothermalis DSM 11300] Length = 910 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L +E+ F F + ++F+D L + G G GKSSL +A+ + YG T R Sbjct: 1 MRPLSLELQGFTAFRQHTTLDFSDLELFALVGPTGSGKSSLLDAMTFALYGTTPR 55 >gi|74179914|dbj|BAE36517.1| unnamed protein product [Mus musculus] Length = 173 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|319411599|emb|CBQ73643.1| probable SMC1-chromosome segregation protein [Sporisorium reilianum] Length = 1243 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI +F+ + Q + + V G NG GKS+L +AI ++ + + Sbjct: 1 MPLKRLEIENFKSYRGHQVVGPFNAFAAVIGPNGSGKSNLMDAISFVLGVRSAQ-LRSSQ 59 Query: 87 IKKR 90 +K Sbjct: 60 LKDL 63 >gi|313234281|emb|CBY10348.1| unnamed protein product [Oikopleura dioica] Length = 1169 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + IE+ F+ + +I +F + G NG GKS++ ++I +L + Sbjct: 1 MFIKSIELDGFKSYARRTEIKDFDPLFNAITGLNGSGKSNILDSICFLLGISQLTQVRAT 60 Query: 86 SIKKRSIK 93 S+ K Sbjct: 61 SLNDLVYK 68 >gi|257067226|ref|YP_003153481.1| DNA replication and repair protein RecF [Brachybacterium faecium DSM 4810] gi|256558044|gb|ACU83891.1| DNA replication and repair protein RecF [Brachybacterium faecium DSM 4810] Length = 414 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++++ FR ++ + +T++ GQNG GK+++ EA+ +L + R H + Sbjct: 1 MQLTSLDLTDFRSYS-RLTLPVRPGITVLVGQNGQGKTNVVEAVWYLATLSSHRVPHDAA 59 Query: 87 IKKRSIKT 94 + R T Sbjct: 60 LVHRGEST 67 >gi|151940792|gb|EDN59179.1| structural maintenance of chromosomes [Saccharomyces cerevisiae YJM789] gi|190406603|gb|EDV09870.1| structural maintenance of chromosome 2 [Saccharomyces cerevisiae RM11-1a] gi|207345626|gb|EDZ72387.1| YFR031Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256268815|gb|EEU04169.1| Smc2p [Saccharomyces cerevisiae JAY291] Length = 1170 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLIYK 68 >gi|56756200|gb|AAW26275.1| SJCHGC07244 protein [Schistosoma japonicum] Length = 219 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKH 83 +L IE+ +++ + Q I T + G NG GKS+L +AI ++ T RR + Sbjct: 7 RLKYIELENYKSYKGKQVIGPFSVFTAIIGPNGSGKSNLMDAISFVLGENTRHLRVRRLN 66 Query: 84 G 84 Sbjct: 67 D 67 >gi|14318554|ref|NP_116687.1| Smc2p [Saccharomyces cerevisiae S288c] gi|730753|sp|P38989|SMC2_YEAST RecName: Full=Structural maintenance of chromosomes protein 2; AltName: Full=DA-box protein SMC2 gi|468040|gb|AAA17416.1| Smc2p [Saccharomyces cerevisiae] gi|836786|dbj|BAA09270.1| chromosome segregation protein SMC2p [Saccharomyces cerevisiae] gi|285811926|tpg|DAA12471.1| TPA: Smc2p [Saccharomyces cerevisiae S288c] Length = 1170 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLIYK 68 >gi|45201073|ref|NP_986643.1| AGL023Wp [Ashbya gossypii ATCC 10895] gi|44985856|gb|AAS54467.1| AGL023Wp [Ashbya gossypii ATCC 10895] Length = 1222 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + + + F + + G NG GKS++ +AI ++ G + Sbjct: 3 RLIGLEVKNFKSYKGVHNVGFGGKNFISIVGPNGSGKSNMMDAISFVL-GIRSSHLRSSA 61 Query: 87 IKKRSIKTPMP 97 + + M Sbjct: 62 LVDLIYRGRME 72 >gi|296109493|ref|YP_003616442.1| SMC domain protein [Methanocaldococcus infernus ME] gi|295434307|gb|ADG13478.1| SMC domain protein [Methanocaldococcus infernus ME] Length = 873 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +++I +FR +EF D + ++ G NG GKSS+ EAI Y R K D Sbjct: 1 MKIEELKIINFRSHKSSV-LEFTDGINLIVGPNGSGKSSILEAILVGLYWDKPRNKIKDF 59 Query: 87 IKK-RSIKTPMPMCMAVPRCK 106 + + + M + + CK Sbjct: 60 HRDGKKAEIEMKLKLNNRSCK 80 >gi|198419101|ref|XP_002119958.1| PREDICTED: similar to XCAP-E [Ciona intestinalis] Length = 1202 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + I+ F + G NG GKS++ +AI +L + Sbjct: 1 MYIKSVTVDGFKSYAQQTDIKGFDPLFNAITGLNGSGKSNILDAICFLLGITNLSQVRAT 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|134057256|emb|CAK96419.1| unnamed protein product [Aspergillus niger] Length = 1252 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|259146222|emb|CAY79481.1| Smc2p [Saccharomyces cerevisiae EC1118] Length = 1170 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I ++ + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLIYK 68 >gi|110743857|dbj|BAE99763.1| structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] Length = 332 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|300865939|ref|ZP_07110676.1| hypothetical protein OSCI_2500011 [Oscillatoria sp. PCC 6506] gi|300336058|emb|CBN55834.1| hypothetical protein OSCI_2500011 [Oscillatoria sp. PCC 6506] Length = 1013 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-- 83 + +++ + F F Q+++F++ L + G G GKSSL +A+ + +G T R Sbjct: 1 MRPIELYLEGFTSFRREQRLDFSELDLFAITGATGAGKSSLLDAMTYALFGTTIRSGKQI 60 Query: 84 GDSIKKRSIKTPMPMCMAVPRCKYQL 109 GD + + S + + +V +Y++ Sbjct: 61 GDLVSQGSETLKVKLHFSVGNAQYRV 86 >gi|324989568|gb|EGC21514.1| recombination protein F [Streptococcus sanguinis SK353] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|323350818|ref|ZP_08086477.1| recombination protein F [Streptococcus sanguinis VMC66] gi|322122992|gb|EFX94695.1| recombination protein F [Streptococcus sanguinis VMC66] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|290999839|ref|XP_002682487.1| structural maintenance of chromosome 1 [Naegleria gruberi] gi|284096114|gb|EFC49743.1| structural maintenance of chromosome 1 [Naegleria gruberi] Length = 1214 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ IE +F+ + Q I D T V G NG GKS+L +AI ++ G + Sbjct: 2 KIVRIEAENFKSYKGRQIIGPFDDFTCVIGPNGSGKSNLMDAISFVM-GLRATYLRSSHL 60 Query: 88 KKR 90 K+ Sbjct: 61 KQL 63 >gi|307150124|ref|YP_003885508.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7822] gi|306980352|gb|ADN12233.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 7822] Length = 384 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + E Q++ F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTVQLRSFRNYRE-QRVNFDSQKTIIVGNNAQGKSNLLEAVELLATLKSHRVSRDRD 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|125719147|ref|YP_001036280.1| recombination protein F [Streptococcus sanguinis SK36] gi|166221875|sp|A3CRC5|RECF_STRSV RecName: Full=DNA replication and repair protein recF gi|125499064|gb|ABN45730.1| DNA replication and repair protein recF, putative [Streptococcus sanguinis SK36] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|39963673|gb|AAH64368.1| SMC1A protein [Homo sapiens] Length = 847 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|297816760|ref|XP_002876263.1| hypothetical protein ARALYDRAFT_323999 [Arabidopsis lyrata subsp. lyrata] gi|297322101|gb|EFH52522.1| hypothetical protein ARALYDRAFT_323999 [Arabidopsis lyrata subsp. lyrata] Length = 1257 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F+ + Q + T + G NG GKS+L +AI ++ T + G + Sbjct: 10 KILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGSQL 68 Query: 88 KKR 90 K Sbjct: 69 KDL 71 >gi|281206402|gb|EFA80589.1| structural maintenance of chromosome protein [Polysphondylium pallidum PN500] Length = 1324 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+L+ K+ +E+ +F+ + Q I F T V G NG GKS++ +A+ ++F G ++ Sbjct: 67 RRLMIKM--MELENFKSYAGKQVIGPFHKCFTSVIGPNGSGKSNVIDAMLFVF-GRRAKQ 123 Query: 82 KHGDSIKKRSIKTPMPMCMAVPR 104 + + + + + R Sbjct: 124 IRLNKVSELVHNSSQHRNVQSAR 146 >gi|327197619|ref|YP_004301310.1| gp34 [Brochothrix phage NF5] gi|296245442|gb|ADH03056.1| gp34 [Brochothrix phage NF5] Length = 660 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I KL +E+ +F+G E+ I F D+ T + G NG GK+++ +A WLFYG + Sbjct: 3 IIKLKSLELENFKGVKELL-INFDDN-TQILGANGSGKTTVVDAFYWLFYGKDSNNRADF 60 Query: 86 SIK 88 ++K Sbjct: 61 ALK 63 >gi|159127797|gb|EDP52912.1| cohesin complex subunit (Psm1), putative [Aspergillus fumigatus A1163] Length = 1289 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|330503730|ref|YP_004380599.1| hypothetical protein MDS_2816 [Pseudomonas mendocina NK-01] gi|328918016|gb|AEB58847.1| hypothetical protein MDS_2816 [Pseudomonas mendocina NK-01] Length = 888 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL + + FRGF + + + + + G NG GK+SL E +E+ G + + Sbjct: 84 VKLRHLTLGPFRGFRTPEPFDLSKQIILFYGPNGSGKTSLCEGLEYALLGDVEEAGNK 141 >gi|324991876|gb|EGC23799.1| recombination protein F [Streptococcus sanguinis SK405] gi|324996234|gb|EGC28144.1| recombination protein F [Streptococcus sanguinis SK678] gi|327458500|gb|EGF04850.1| recombination protein F [Streptococcus sanguinis SK1] gi|327471598|gb|EGF17041.1| recombination protein F [Streptococcus sanguinis SK408] gi|327490328|gb|EGF22115.1| recombination protein F [Streptococcus sanguinis SK1058] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|71000142|ref|XP_754788.1| cohesin complex subunit (Psm1) [Aspergillus fumigatus Af293] gi|66852425|gb|EAL92750.1| cohesin complex subunit (Psm1), putative [Aspergillus fumigatus Af293] Length = 1289 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|330915009|ref|XP_003296873.1| hypothetical protein PTT_07081 [Pyrenophora teres f. teres 0-1] gi|311330803|gb|EFQ95045.1| hypothetical protein PTT_07081 [Pyrenophora teres f. teres 0-1] Length = 1215 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + E +IE F+ + +V G+NG GKS+ A+ ++ + Sbjct: 3 YIKQITIQGFKSYKEQLQIEPFSPNCNVVVGRNGSGKSNFFAAVRFVLGDDYHNLGREE 61 >gi|256831258|ref|YP_003159985.1| DNA replication and repair protein RecF [Jonesia denitrificans DSM 20603] gi|256684789|gb|ACV07682.1| DNA replication and repair protein RecF [Jonesia denitrificans DSM 20603] Length = 415 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +R + E IEFA + ++ G NG GK+++ EAI +L + R H + Sbjct: 1 MYVSHLSLVDYRSY-EHVDIEFAPGVNVLVGHNGQGKTNIVEAIGYLATLASHRVAHDTA 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRVGAQ 66 >gi|224074645|ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa] gi|222841837|gb|EEE79384.1| condensin complex components subunit [Populus trichocarpa] Length = 1176 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + ++ F + G NG GKS++ ++I ++ ++ Sbjct: 1 MYIKEICLEGFKSYATRTVVQGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|119492495|ref|XP_001263613.1| cohesin complex subunit (Psm1), putative [Neosartorya fischeri NRRL 181] gi|119411773|gb|EAW21716.1| cohesin complex subunit (Psm1), putative [Neosartorya fischeri NRRL 181] Length = 1260 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G + Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTN 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|160941458|ref|ZP_02088793.1| hypothetical protein CLOBOL_06349 [Clostridium bolteae ATCC BAA-613] gi|158435604|gb|EDP13371.1| hypothetical protein CLOBOL_06349 [Clostridium bolteae ATCC BAA-613] Length = 361 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R + E+ +EF I+ G N GK+++ EA+ + + I Sbjct: 3 IESIELKNYRNYKELH-MEFNQGTNILYGDNAQGKTNILEAVYVCCTSKSHKSAKDRDII 61 Query: 89 KRSIK 93 + + Sbjct: 62 RFNQD 66 >gi|149246692|ref|XP_001527771.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447725|gb|EDK42113.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1282 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +E+ +F+ + I + T + G NG GKS+L +AI + G + + S Sbjct: 3 RLIGLELENFKSYKGRTVIGLGSSNFTSIIGPNGSGKSNLMDAISFAL-GLSSSQLRSQS 61 Query: 87 IKKRSIKTPM 96 ++ + Sbjct: 62 MRDLIYRGRR 71 >gi|312070433|ref|XP_003138144.1| SMC protein Flexible Hinge Domain containing protein [Loa loa] gi|307766691|gb|EFO25925.1| SMC protein Flexible Hinge Domain containing protein [Loa loa] Length = 1160 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ IS FR + E +F+ +V G+NG GKS+ AI+++ Sbjct: 1 MYIKEVNISGFRSYRETTVNDFSPRHNVVVGRNGSGKSNFFFAIQFVL 48 >gi|195952860|ref|YP_002121150.1| chromosome segregation protein SMC [Hydrogenobaculum sp. Y04AAS1] gi|195932472|gb|ACG57172.1| chromosome segregation protein SMC [Hydrogenobaculum sp. Y04AAS1] Length = 1148 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I +++F+ + TE +I + + G NG GKS++ +AI + T + + Sbjct: 5 YIEKIVVTNFKSYGTEKLEIPIGEGFIGIVGPNGAGKSNIGDAISFGLGLSTSKTMRAKN 64 Query: 87 I 87 + Sbjct: 65 L 65 >gi|239931597|ref|ZP_04688550.1| hypothetical protein SghaA1_25482 [Streptomyces ghanaensis ATCC 14672] gi|291439969|ref|ZP_06579359.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342864|gb|EFE69820.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 807 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHG 84 L + +S FRG ++ LT+V G+NG GKSS +EA+E G R R Sbjct: 65 YLQSVTVSGFRGIGRTARLPLTPGPGLTLVTGRNGSGKSSFAEAVEIALTGDNARWRGRS 124 Query: 85 DSIKKR 90 D ++ Sbjct: 125 DIWRRS 130 >gi|294866984|ref|XP_002764916.1| structural maintenance of chromosomes smc3, putative [Perkinsus marinus ATCC 50983] gi|239864752|gb|EEQ97633.1| structural maintenance of chromosomes smc3, putative [Perkinsus marinus ATCC 50983] Length = 304 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LI L + I ++ + + I + + + G NG GKS++ AI + G Sbjct: 44 LIMHLKTLTIKGYKTYRDRTSIVDLHAGVNVFVGLNGSGKSNIYSAIRFALGG 96 >gi|193591985|ref|XP_001948129.1| PREDICTED: structural maintenance of chromosomes protein 1A-like [Acyrthosiphon pisum] Length = 1239 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I + T V G NG GKS+ +AI ++ T Sbjct: 5 LKCIEMDNFKSYRGHHMIGPLKNFTAVIGPNGSGKSNFMDAISFVMGEKT 54 >gi|189191974|ref|XP_001932326.1| structural maintenance of chromosomes protein 3 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973932|gb|EDU41431.1| structural maintenance of chromosomes protein 3 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1206 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 28 KLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + E +IE F+ + +V G+NG GKS+ A+ ++ + Sbjct: 3 YIKQITIQGFKSYKEQLQIEPFSPNCNVVVGRNGSGKSNFFAAVRFVLGDDYHNLGREE 61 >gi|240147291|ref|ZP_04745892.1| conserved hypothetical protein [Roseburia intestinalis L1-82] gi|257200517|gb|EEU98801.1| conserved hypothetical protein [Roseburia intestinalis L1-82] Length = 521 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ I+I +FR + E I F D+LT++ G+N GKS++ EA+ Sbjct: 1 MKIESIKIKNFRSYKEETIIRF-DNLTVLVGRNDIGKSTILEAL 43 >gi|303244904|ref|ZP_07331230.1| SMC domain protein [Methanothermococcus okinawensis IH1] gi|302484721|gb|EFL47659.1| SMC domain protein [Methanothermococcus okinawensis IH1] Length = 997 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRRKHGDSI 87 + I I +FR + +I F +T + G NG GKSS+ EA+ + Y + + D + Sbjct: 3 IKAINIRNFRSH-KNTQISFDKGITTIIGHNGSGKSSIFEAMNYALYARGSVSNVNIDDL 61 Query: 88 KKRSIKT 94 KR Sbjct: 62 IKRGTNQ 68 >gi|282898562|ref|ZP_06306550.1| RecF protein [Cylindrospermopsis raciborskii CS-505] gi|281196430|gb|EFA71339.1| RecF protein [Cylindrospermopsis raciborskii CS-505] Length = 369 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + E QK+EF TI+ G N GKS+L E++E L + R Sbjct: 1 MYLQSLELRHFRNYQE-QKVEFTAPKTILVGNNAQGKSNLLESVELLATLRSHRLGKDRD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 FIQEGAE 66 >gi|268679582|ref|YP_003304013.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617613|gb|ACZ11978.1| SMC domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 789 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F+ ++ IEF + L + G+NG GKS+L EAI + YG + +K + I+ Sbjct: 3 LSKLHLENFKRYSSFD-IEFGEGLIGIIGKNGSGKSTLFEAILFALYGELRNKKFKEVIR 61 Query: 89 KRS 91 S Sbjct: 62 NAS 64 >gi|210624033|ref|ZP_03294150.1| hypothetical protein CLOHIR_02102 [Clostridium hiranonis DSM 13275] gi|210153240|gb|EEA84246.1| hypothetical protein CLOHIR_02102 [Clostridium hiranonis DSM 13275] Length = 368 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++++ ++R + + IEF D + ++ G NG GK++++E+I L +G + R Sbjct: 1 MKLKNLQLVNYRNY-DKLYIEFNDRINLLLGSNGQGKTNIAESIYLLAFGKSFRTNRDRE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 LIKFNTE 66 >gi|332365084|gb|EGJ42849.1| recombination protein F [Streptococcus sanguinis SK355] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|332364154|gb|EGJ41931.1| recombination protein F [Streptococcus sanguinis SK49] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|332363594|gb|EGJ41375.1| recombination protein F [Streptococcus sanguinis SK1059] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|327467748|gb|EGF13242.1| recombination protein F [Streptococcus sanguinis SK330] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|327463824|gb|EGF10140.1| recombination protein F [Streptococcus sanguinis SK1057] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|325698042|gb|EGD39923.1| recombination protein F [Streptococcus sanguinis SK160] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|325689344|gb|EGD31350.1| recombination protein F [Streptococcus sanguinis SK115] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|325686466|gb|EGD28495.1| recombination protein F [Streptococcus sanguinis SK72] Length = 364 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|322373988|ref|ZP_08048522.1| DNA replication and repair protein RecF [Streptococcus sp. C150] gi|321276954|gb|EFX54025.1| DNA replication and repair protein RecF [Streptococcus sp. C150] Length = 367 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R + Sbjct: 1 MWLEKIDIQHFRNYSE-AYVTFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIQFQQST 67 >gi|300765830|ref|ZP_07075804.1| hypothetical protein LMHG_12470 [Listeria monocytogenes FSL N1-017] gi|300513407|gb|EFK40480.1| hypothetical protein LMHG_12470 [Listeria monocytogenes FSL N1-017] Length = 647 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL +++ +F+G E++ I+F D+ T + G N GK+++ +A WL + K + Sbjct: 4 IKLLKLQLENFKGIKELE-IDFQDN-TSIYGANASGKTTILDAFTWLLFDKDSTNKKDFA 61 Query: 87 IKKRSIK 93 IK + Sbjct: 62 IKTLGAE 68 >gi|225466149|ref|XP_002269854.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1176 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + + G NG GKS++ ++I ++ ++ Sbjct: 1 MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|134095199|ref|YP_001100274.1| hypothetical protein HEAR2007 [Herminiimonas arsenicoxydans] gi|133739102|emb|CAL62151.1| Conserved hypothetical protein, putative ATPase involved in DNA repair [Herminiimonas arsenicoxydans] Length = 874 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G + Sbjct: 82 RLRQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSISEA----QV 137 Query: 88 KKRSIKT 94 K+ +T Sbjct: 138 KRVDQRT 144 >gi|107102069|ref|ZP_01365987.1| hypothetical protein PaerPA_01003118 [Pseudomonas aeruginosa PACS2] Length = 823 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G + Sbjct: 31 RLRQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSISEA----QV 86 Query: 88 KKRSIKT 94 K+ +T Sbjct: 87 KRVDQRT 93 >gi|242214587|ref|XP_002473115.1| predicted protein [Postia placenta Mad-698-R] gi|220727776|gb|EED81685.1| predicted protein [Postia placenta Mad-698-R] Length = 275 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +IE F+ +V G+NG GKS+ AI ++ Sbjct: 1 MYIKTLTIQGFKSYRDQTQIEPFSPRHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|157325333|ref|YP_001468753.1| gp49 [Listeria phage B054] gi|66733338|gb|AAY53154.1| gp49 [Listeria phage B054] Length = 647 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL +++ +F+G E++ I+F D+ T + G N GK+++ +A WL + K + Sbjct: 4 IKLLKLQLENFKGIKELE-IDFQDN-TSIYGANASGKTTILDAFTWLLFDKDSTNKKDFA 61 Query: 87 IKKRSIK 93 IK + Sbjct: 62 IKTLGAE 68 >gi|15232802|ref|NP_190330.1| ATSMC2; transporter [Arabidopsis thaliana] gi|75337454|sp|Q9SN90|SMC22_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-2; Short=AtSMC2-2; AltName: Full=Chromosome-associated protein E-2; Short=AtCAP-E2 gi|6522529|emb|CAB61972.1| chromosome assembly protein homolog [Arabidopsis thaliana] gi|332644763|gb|AEE78284.1| structural maintenance of chromosomes protein 2-2 [Arabidopsis thaliana] Length = 1171 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|325695750|gb|EGD37649.1| recombination protein F [Streptococcus sanguinis SK150] gi|328945164|gb|EGG39319.1| recombination protein F [Streptococcus sanguinis SK1087] Length = 364 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EA+ +L + R + Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAVYFLALTRSHRTRSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|320527131|ref|ZP_08028318.1| putative recombination protein F [Solobacterium moorei F0204] gi|320132459|gb|EFW25002.1| putative recombination protein F [Solobacterium moorei F0204] Length = 363 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ +FR + E IEF + ++ G N GK++L E++ +L + R Sbjct: 1 MYIKNIQLRNFRNY-ENAYIEFNPSINLITGANAQGKTNLLESLVYLSLTRSHRIVDDKK 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|147833306|emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera] Length = 1137 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + + G NG GKS++ ++I ++ ++ Sbjct: 1 MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|220907751|ref|YP_002483062.1| SMC domain-containing protein [Cyanothece sp. PCC 7425] gi|219864362|gb|ACL44701.1| SMC domain protein [Cyanothece sp. PCC 7425] Length = 912 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++L + + +F+ ++ + F + + G NG GK+S+ EAI W+ + Y Sbjct: 1 MEILSVTLKNFKVHSDRE-FTFQPGMNAICGVNGAGKTSILEAIAWVLFDY 50 >gi|154292859|ref|XP_001546997.1| hypothetical protein BC1G_14462 [Botryotinia fuckeliana B05.10] gi|150845739|gb|EDN20932.1| hypothetical protein BC1G_14462 [Botryotinia fuckeliana B05.10] Length = 1227 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I I F+ + + I+ F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MVYIKQINIQGFKSYKDQTLIDEFSPATNVIVGRNGSGKSNFFAAIRFVL 50 >gi|332359507|gb|EGJ37326.1| recombination protein F [Streptococcus sanguinis SK1056] Length = 287 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + E I+F L + GQN GK+++ EAI +L + R Sbjct: 1 MWLQSLKIKHFRNYQE-ADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTCSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|32766679|gb|AAH55212.1| Smc1a protein [Danio rerio] Length = 414 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKT 53 >gi|328870533|gb|EGG18907.1| structural maintenance of chromosome protein [Dictyostelium fasciculatum] Length = 1372 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + F+ + K++ F + G NG GKS++ +AI ++ + + Sbjct: 194 IESITLEGFKSYARKIKLDNFDPSFNAITGMNGSGKSNILDAICFVLGISKLGQVRATKL 253 Query: 88 KKRSIKT 94 K Sbjct: 254 DDLVYKQ 260 >gi|288817659|ref|YP_003432006.1| chromosome segregation ATPase [Hydrogenobacter thermophilus TK-6] gi|288787058|dbj|BAI68805.1| chromosome segregation ATPase [Hydrogenobacter thermophilus TK-6] gi|308751257|gb|ADO44740.1| chromosome segregation protein SMC [Hydrogenobacter thermophilus TK-6] Length = 1154 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + F+ + +I + G NG GKS++ +AI + T + ++ Sbjct: 5 IEKIVVEGFKSYGKGRVEIPLGPGFVGIVGPNGAGKSNIGDAISFALSLATAKTLRAKNL 64 >gi|89892749|ref|YP_516236.1| DNA replication and repair protein recF [Desulfitobacterium hafniense Y51] gi|219666074|ref|YP_002456509.1| DNA replication and repair protein RecF [Desulfitobacterium hafniense DCB-2] gi|122484263|sp|Q252K0|RECF_DESHY RecName: Full=DNA replication and repair protein recF gi|254790474|sp|B8FXW8|RECF_DESHD RecName: Full=DNA replication and repair protein recF gi|89332197|dbj|BAE81792.1| DNA replication and repair protein recF [Desulfitobacterium hafniense Y51] gi|219536334|gb|ACL18073.1| DNA replication and repair protein RecF [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + FR + + Q+++F LTI+ G+NG GK+++ E I +L G + R Sbjct: 1 MEIKWLHLKSFRNYQD-QEVDFRPGLTILQGENGQGKTNILEGIYYLLTGKSYRVHREQE 59 Query: 87 IKK 89 + + Sbjct: 60 LAR 62 >gi|308163233|gb|EFO65589.1| SMC6 protein [Giardia lamblia P15] Length = 1303 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I++F + ++F +++++G NG GKSS+ +AI ++ G + + Sbjct: 44 YILRLHITNFLTHRDKI-VDFTCPVSLIHGPNGAGKSSILQAIHFVLGGK-AKNIRDNCE 101 Query: 88 KKRSIKT 94 + ++KT Sbjct: 102 RFSNLKT 108 >gi|170589952|ref|XP_001899737.1| SMC proteins Flexible Hinge Domain containing protein [Brugia malayi] gi|158592863|gb|EDP31459.1| SMC proteins Flexible Hinge Domain containing protein [Brugia malayi] Length = 1204 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ IS FR + E +F+ +V G+NG GKS+ AI+++ Sbjct: 1 MYIKEVNISGFRSYRETTVNDFSPRHNVVVGRNGSGKSNFFFAIQFVL 48 >gi|85014499|ref|XP_955745.1| chromosome segregation protein [Encephalitozoon cuniculi GB-M1] gi|19171439|emb|CAD27164.1| CHROMOSOME SEGREGATION PROTEIN OF THE SMC FAMILY [Encephalitozoon cuniculi GB-M1] Length = 1017 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I + +FR F + + ++H I+ G+NG GKSS+ A+ ++ G Sbjct: 1 MHIKQIRLKNFRSFRDEVVVPLSEHTNIIVGRNGSGKSSIVSAVHFVLCGEKH 53 >gi|300123109|emb|CBK24116.2| unnamed protein product [Blastocystis hominis] Length = 1330 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ + +++I F + T + G NG GKS++ +A+ ++F + Sbjct: 32 IDKLVLENFKSYAGVKEIGPFHKNFTSIVGPNGSGKSNVIDAMLFVFGKRASK 84 >gi|300781881|ref|YP_003739116.1| hypothetical protein EbC_pEb10200590 [Erwinia billingiae Eb661] gi|299060147|emb|CAX53337.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 875 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR----- 80 I +LL +E+ FRGF + + + +T++ G NG GKSS EA+E G Sbjct: 80 IGRLLQLEVGPFRGFMRQETFDLSYDITLIYGANGTGKSSFFEALELAMLGSISEAQIKR 139 Query: 81 ---RKHGDSIKKRSIKTPMPM 98 R + ++ + +S TP+ M Sbjct: 140 IDGRVYCNNARLQSHVTPVLM 160 >gi|227506185|ref|ZP_03936234.1| recombination protein F [Corynebacterium striatum ATCC 6940] gi|227197209|gb|EEI77257.1| recombination protein F [Corynebacterium striatum ATCC 6940] Length = 392 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ FR + E+ IE +T+ G+NGYGK+++ EAI ++ + + R H Sbjct: 1 MFIRELDVRDFRSWPEL-SIELGPGITLFVGRNGYGKTNIVEAIGYVAHLSSHRVSHDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++S AV Sbjct: 60 LVRQSAVNARISTTAV 75 >gi|258510024|ref|YP_003183458.1| DNA replication and repair protein RecF [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476750|gb|ACV57069.1| DNA replication and repair protein RecF [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 371 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + +IE + + ++ G+NG GK++ EA+ + G + R Sbjct: 1 MDIRRVELHDFRNYA-KAEIELSPGVNVLVGENGQGKTNALEAMLLIAVGKSHRAHRDRD 59 Query: 87 IKKRSIKTPMPMCMAVPR 104 + + + A R Sbjct: 60 LIRWEQDRARILLEASTR 77 >gi|256851677|ref|ZP_05557065.1| recombination protein F [Lactobacillus jensenii 27-2-CHN] gi|260661606|ref|ZP_05862518.1| recombination protein F [Lactobacillus jensenii 115-3-CHN] gi|282934239|ref|ZP_06339516.1| DNA replication and repair protein RecF [Lactobacillus jensenii 208-1] gi|297205286|ref|ZP_06922682.1| recombination protein F [Lactobacillus jensenii JV-V16] gi|256615635|gb|EEU20824.1| recombination protein F [Lactobacillus jensenii 27-2-CHN] gi|260547663|gb|EEX23641.1| recombination protein F [Lactobacillus jensenii 115-3-CHN] gi|281301713|gb|EFA93980.1| DNA replication and repair protein RecF [Lactobacillus jensenii 208-1] gi|297149864|gb|EFH30161.1| recombination protein F [Lactobacillus jensenii JV-V16] Length = 374 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ ++R F E++ +F+ ++ I GQN GK++L EA+ +L + R Sbjct: 1 MYLKQLKLQNWRNFEELET-DFSPNVNIFIGQNAQGKTNLLEAVYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGQK 66 >gi|268574232|ref|XP_002642093.1| C. briggsae CBR-SMC-4 protein [Caenorhabditis briggsae] Length = 1551 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++++E+++F+ + I F T + G NG GKS+L +++ ++F Sbjct: 98 IMNVEVNNFKSYYGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFG 145 >gi|19112972|ref|NP_596180.1| condensin subunit Cut14 [Schizosaccharomyces pombe 972h-] gi|13124693|sp|P41003|SMC2_SCHPO RecName: Full=Structural maintenance of chromosomes protein 2; AltName: Full=Cell untimely torn protein 14; AltName: Full=Chromosome segregation protein cut14 gi|7363183|emb|CAB83164.1| condensin subunit Cut14 [Schizosaccharomyces pombe] Length = 1172 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + D + G NG GKS++ +AI ++ Sbjct: 1 MKIEELIIDGFKSYAVRTVISNWDDQFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|6177744|dbj|BAA06453.2| cut14 protein [Schizosaccharomyces pombe] Length = 1172 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + D + G NG GKS++ +AI ++ Sbjct: 1 MKIEELIIDGFKSYAVRTVISNWDDQFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|330802950|ref|XP_003289474.1| hypothetical protein DICPUDRAFT_80252 [Dictyostelium purpureum] gi|325080432|gb|EGC33988.1| hypothetical protein DICPUDRAFT_80252 [Dictyostelium purpureum] Length = 1357 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +EI +F+ + I F D + V G NG GKS++ +AI ++ T + G Sbjct: 1 MGIRLLEICNFKSYRGKHLIGPFKD-FSCVIGPNGSGKSNIMDAIIFVLGHKTAQ-IRGT 58 Query: 86 SIKKRSIKTP 95 + Sbjct: 59 KLSDLVNNQE 68 >gi|309357322|emb|CAP35561.2| CBR-SMC-4 protein [Caenorhabditis briggsae AF16] Length = 1572 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++++E+++F+ + I F T + G NG GKS+L +++ ++F Sbjct: 98 IMNVEVNNFKSYYGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFG 145 >gi|254520975|ref|ZP_05133030.1| hypothetical protein SSKA14_97 [Stenotrophomonas sp. SKA14] gi|219718566|gb|EED37091.1| hypothetical protein SSKA14_97 [Stenotrophomonas sp. SKA14] Length = 855 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 63 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 113 >gi|226530720|ref|NP_001140280.1| hypothetical protein LOC100272324 [Zea mays] gi|194698834|gb|ACF83501.1| unknown [Zea mays] Length = 395 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 28 KLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+ + Q I F D T + G NG GKS+L +AI ++ + G Sbjct: 21 RIDRLVVENFKSYKGEQTIGPFVD-FTAIIGPNGAGKSNLMDAISFVLGVRST-HLRGAQ 78 Query: 87 IKKR 90 +K Sbjct: 79 LKDL 82 >gi|221064749|ref|ZP_03540854.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gi|220709772|gb|EED65140.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 874 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 132 >gi|121593676|ref|YP_985572.1| hypothetical protein Ajs_1272 [Acidovorax sp. JS42] gi|120605756|gb|ABM41496.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 874 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 132 >gi|218891392|ref|YP_002440259.1| COG1196: Chromosome segregation ATPases [Pseudomonas aeruginosa LESB58] gi|218771618|emb|CAW27391.1| COG1196: Chromosome segregation ATPases [Pseudomonas aeruginosa LESB58] Length = 860 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 68 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 118 >gi|94311274|ref|YP_584484.1| hypothetical protein Rmet_2338 [Cupriavidus metallidurans CH34] gi|254241425|ref|ZP_04934747.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|24461586|gb|AAN62157.1|AF440523_64 hypothetical protein [Pseudomonas aeruginosa] gi|93355126|gb|ABF09215.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] gi|126194803|gb|EAZ58866.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 874 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLHQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 132 >gi|256810611|ref|YP_003127980.1| SMC domain protein [Methanocaldococcus fervens AG86] gi|256793811|gb|ACV24480.1| SMC domain protein [Methanocaldococcus fervens AG86] Length = 1007 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I++F+ KI F D + + G+NG GKSS+ EA+ + +G R+ G Sbjct: 3 INSITINNFKSHV-NTKITFNDGIIAIIGENGSGKSSIFEAMFFALFGADALRRMG 57 >gi|242398089|ref|YP_002993513.1| DNA double-strand break repair rad50 ATPase [Thermococcus sibiricus MM 739] gi|242264482|gb|ACS89164.1| DNA double-strand break repair rad50 ATPase [Thermococcus sibiricus MM 739] Length = 895 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I +FR E +EF D + ++ GQNG GKSS+ EA+ Y Sbjct: 9 MRIRSLKIKNFRAH-ENSHVEFNDGINLIIGQNGSGKSSILEAVFASLY 56 >gi|313127099|ref|YP_004037369.1| ATPase involved in DNA repair [Halogeometricum borinquense DSM 11551] gi|312293464|gb|ADQ67924.1| ATPase involved in DNA repair [Halogeometricum borinquense DSM 11551] Length = 894 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +F+ + E ++ D +T+++G NG GKSSL EA + YG Sbjct: 1 MRFDRIRLQNFKPYAE-TDLDLTDGVTVIHGLNGSGKSSLLEACFFALYG 49 >gi|126338810|ref|XP_001378464.1| PREDICTED: similar to structural maintenance of chromosomes 1B [Monodelphis domestica] Length = 1240 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + + +F+ + Q + T + G NG GKS++ +A+ ++ T Sbjct: 3 RLDRLLVENFKSWRGRQVLGPFRGFTCIVGPNGSGKSNVMDALSFVMGERT 53 >gi|331270703|ref|YP_004397195.1| DNA replication and repair protein RecF [Clostridium botulinum BKT015925] gi|329127253|gb|AEB77198.1| DNA replication and repair protein RecF [Clostridium botulinum BKT015925] Length = 360 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +FR + + +EF + + G N GK+++ E+I + G + R Sbjct: 1 MYIKNLQVINFRNY-DNLVLEFNKGINVFVGDNAQGKTNILESIYYCGLGKSHRTNKDKE 59 Query: 87 IKKRSIK 93 + K K Sbjct: 60 LIKWGSK 66 >gi|156540772|ref|XP_001600265.1| PREDICTED: similar to LP09268p [Nasonia vitripennis] Length = 1307 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Query: 28 KLLDIEISHFRGFTE---IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ D+EI R F + I F+ LT++ G NG GK+++ EA++++ G Sbjct: 3 RIKDLEIRGIRNFGDERAKVLIHFSKPLTLILGPNGTGKTTIIEALKFVTSG 54 >gi|12850267|dbj|BAB28654.1| unnamed protein product [Mus musculus] Length = 270 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|297625207|ref|YP_003686970.1| DNA replication and repair protein recF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296920972|emb|CBL55509.1| DNA replication and repair protein recF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 433 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E K++ +++ G NG+GK++L EA+E+L + R Sbjct: 1 MFVDHLELKDFRSY-EAAKLDIGPGVSVFVGPNGHGKTNLVEAVEYLSTLSSHRVSADAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIRAGTSQ 67 >gi|14279543|gb|AAK58634.1|AF271731_1 SMC2-like condensin [Arabidopsis thaliana] gi|13449986|gb|AAG27593.2| SMC2-like condensin [Arabidopsis thaliana] Length = 1177 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|322418046|ref|YP_004197269.1| SMC domain-containing protein [Geobacter sp. M18] gi|320124433|gb|ADW11993.1| SMC domain protein [Geobacter sp. M18] Length = 637 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ + I +FRG+ + F D+ T + G NG GKS++ A+ Sbjct: 1 MKIESVRIKNFRGYADETI--FFDNYTCLVGPNGAGKSTILSAL 42 >gi|145533158|ref|XP_001452329.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420017|emb|CAK84932.1| unnamed protein product [Paramecium tetraurelia] Length = 1222 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + ++ + +F+ + +I H + G NG GKS+ +AI+++F Sbjct: 6 IKEVILENFKSYYGEHRIICGSHFNSIIGPNGSGKSNFIDAIQFVFG 52 >gi|15241831|ref|NP_201047.1| SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2); transporter [Arabidopsis thaliana] gi|146325733|sp|Q9C5Y4|SMC21_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-1; Short=AtSMC2-1; AltName: Full=Chromosome-associated protein E-1; Short=AtCAP-E1; AltName: Full=Protein TITAN 3 gi|10178072|dbj|BAB11491.1| chromosome assembly protein homolog [Arabidopsis thaliana] gi|332010222|gb|AED97605.1| structural maintenance of chromosomes protein 2-1 [Arabidopsis thaliana] Length = 1175 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|326430011|gb|EGD75581.1| SMC2 protein [Salpingoeca sp. ATCC 50818] Length = 1212 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I I F+ + + + +F + G NG GKS++ +AI ++ + Sbjct: 1 MFISEIIIDGFKSYAQRTVVSDFDPFFNAITGLNGSGKSNILDAICFVLGISNLSQVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 TLQELIYKQ 69 >gi|116283354|gb|AAH17845.1| SMC2 protein [Homo sapiens] Length = 289 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|28376978|ref|NP_783870.1| recombination protein F [Lactobacillus plantarum WCFS1] gi|254555173|ref|YP_003061590.1| recombination protein F [Lactobacillus plantarum JDM1] gi|300769109|ref|ZP_07078998.1| recombination protein F [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179195|ref|YP_003923323.1| recombination protein F [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258550|sp|Q890K5|RECF_LACPL RecName: Full=DNA replication and repair protein recF gi|28269809|emb|CAD62706.1| DNA repair and genetic recombination protein RecF [Lactobacillus plantarum WCFS1] gi|254044100|gb|ACT60893.1| recombination protein F [Lactobacillus plantarum JDM1] gi|300493349|gb|EFK28528.1| recombination protein F [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308044686|gb|ADN97229.1| recombination protein F [Lactobacillus plantarum subsp. plantarum ST-III] Length = 374 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + FR + ++ I F+ + ++ G+N GK++L EAI L + R + Sbjct: 1 MYLENLVLHDFRNYADLT-INFSQGVNVLLGENAQGKTNLLEAIYVLALTRSHRTANDKE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIRWQTTT 67 >gi|324500751|gb|ADY40344.1| Structural maintenance of chromosomes protein 4 [Ascaris suum] Length = 1544 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE+ +F+ + + F +L+ + G NG GKS++ +++ ++F GY + I Sbjct: 79 IHSIEVENFKSYYGKHVLGPFHHNLSAIIGPNGSGKSNVIDSLLFVF-GYRASKIRSKKI 137 >gi|321469575|gb|EFX80555.1| hypothetical protein DAPPUDRAFT_318525 [Daphnia pulex] Length = 1247 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 KL L IE+ +F+ + Q+I + + V G NG GKS+ +A+ ++ TQ Sbjct: 3 KLRSNLKYIEVENFKSYLGFQRIGPLKNFSAVIGPNGSGKSNFMDAVSFVMGEKTQ 58 >gi|300711798|ref|YP_003737612.1| chromosome segregation protein [Halalkalicoccus jeotgali B3] gi|299125481|gb|ADJ15820.1| chromosome segregation protein [Halalkalicoccus jeotgali B3] Length = 890 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ + +++F+ + + + +++++G NG GKSSL EA + YG + Sbjct: 1 MRIERVRLTNFKPYRD-TDLRLERGVSVIHGLNGSGKSSLLEACFFALYGSSA 52 >gi|239624130|ref|ZP_04667161.1| DNA replication and repair protein RecF [Clostridiales bacterium 1_7_47_FAA] gi|239520516|gb|EEQ60382.1| DNA replication and repair protein RecF [Clostridiales bacterium 1_7_47FAA] Length = 361 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R + E+ +EF I+ G N GK+++ EA+ + + I Sbjct: 3 IESIELKNYRNYQELH-MEFNQGTNILYGDNAQGKTNILEAVYVCCTSKSHKSAKDRDII 61 Query: 89 KRSIK 93 + Sbjct: 62 RFDQD 66 >gi|293392448|ref|ZP_06636770.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291425102|gb|EFE98309.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 871 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +E+ FRGF + + + + +T++ G NG GKSS EA+E G + Sbjct: 82 RLHQLEVGPFRGFMQQEIFDLSYDITLIYGANGTGKSSFCEALEVAMLGSISEA----QV 137 Query: 88 KKRSIKT 94 K+ +T Sbjct: 138 KRVDQRT 144 >gi|254567706|ref|XP_002490963.1| Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an [Pichia pastoris GS115] gi|238030760|emb|CAY68683.1| Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an [Pichia pastoris GS115] gi|328352504|emb|CCA38903.1| Structural maintenance of chromosomes protein 4 [Pichia pastoris CBS 7435] Length = 1225 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ + + +F+ + + +I F + T + G NG GKS+L +AI ++ + + Sbjct: 3 RLIGLNLYNFKSYRGLNRIGFGSANFTSIMGTNGSGKSNLMDAISFVLGLQS-NSLRSTN 61 Query: 87 IKKRSIK 93 K + Sbjct: 62 AKDLIYR 68 >gi|51327185|gb|AAH80185.1| SMC1A protein [Homo sapiens] Length = 417 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + G NG GKS+L +AI ++ T Sbjct: 4 LKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKT 53 >gi|86610145|ref|YP_478907.1| recombination protein F [Synechococcus sp. JA-2-3B'a(2-13)] gi|97181049|sp|Q2JIB8|RECF_SYNJB RecName: Full=DNA replication and repair protein recF gi|86558687|gb|ABD03644.1| DNA replication and repair protein RecF [Synechococcus sp. JA-2-3B'a(2-13)] Length = 380 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + + Q+I F TI+ G+N GK++L EA+E L ++R Sbjct: 1 MYLRSLHLRHFRNYRD-QEITFDAPKTILVGENAQGKTNLLEAVELLATLRSRRASRDRE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LVYQEERQ 67 >gi|331266271|ref|YP_004325901.1| conserved hypothetical protein, P-loop NTPase,putative [Streptococcus oralis Uo5] gi|326682943|emb|CBZ00560.1| conserved hypothetical protein, P-loop NTPase,putative [Streptococcus oralis Uo5] Length = 238 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I++ +F+ F IEF++ + G N GK+++ +AIE++ G Sbjct: 1 MYISKIKLVNFKSFKGEHVIEFSEGVNFFVGNNNCGKTTIFKAIEFIQSG 50 >gi|313240570|emb|CBY32899.1| unnamed protein product [Oikopleura dioica] Length = 658 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + IE+ F+ + +I +F + G NG GKS++ ++I +L + Sbjct: 1 MFIKSIELDGFKSYARRTEIKDFDPLFNAITGLNGSGKSNILDSICFLLGISQLTQVRAT 60 Query: 86 SIKKRSIK 93 S+ K Sbjct: 61 SLNDLVYK 68 >gi|328874190|gb|EGG22556.1| structural maintenance of chromosome protein [Dictyostelium fasciculatum] Length = 1442 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R+LI + +EI +F+ + ++ F + V G NG GKS++ ++I ++F + Sbjct: 188 RRLI--IEKLEIENFKSYAGKVELGPFHKCFSSVIGPNGSGKSNVLDSIRFVFGER-AKN 244 Query: 82 KHGDSI 87 + I Sbjct: 245 IRFNKI 250 >gi|209880004|ref|XP_002141442.1| structural maintenance of chromosomes protein [Cryptosporidium muris RN66] gi|209557048|gb|EEA07093.1| structural maintenance of chromosomes protein, putative [Cryptosporidium muris RN66] Length = 1268 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ I F+ + + I F + G NG GKS++ AI++LF Sbjct: 1 MYIKEVRIKGFKTYRDETVITFDPGCNCIVGLNGSGKSNILAAIQFLF 48 >gi|74208366|dbj|BAE26376.1| unnamed protein product [Mus musculus] Length = 1233 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|46110056|ref|XP_382086.1| hypothetical protein FG01910.1 [Gibberella zeae PH-1] Length = 1263 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHVLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSAH 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLVYR 68 >gi|307320645|ref|ZP_07600058.1| SMC domain protein [Sinorhizobium meliloti AK83] gi|306893680|gb|EFN24453.1| SMC domain protein [Sinorhizobium meliloti AK83] Length = 1018 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RK 82 L +E S+FR + + + +T++ G NG GK+S + +EW G R Sbjct: 4 IFLRSVEFSNFRVYGDSYVFKLPAEPGVTLITGANGLGKTSFFDGVEWALTGQVSRFSDI 63 Query: 83 HGDSIKKRS 91 D+ ++ + Sbjct: 64 RTDNRRREA 72 >gi|299470718|emb|CBN79764.1| similar to Structural maintenance of chromosome 3 [Ectocarpus siliculosus] Length = 1388 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +S FR F +IE F+ ++ G+NG GKS+ +AI++ + Sbjct: 1 MHIKQVSMSGFRSFRSQPEIESFSPRHNVIVGRNGSGKSNFFDAIQFALLNQRFSNLRQE 60 >gi|27227572|emb|CAD59403.1| SMC1 protein [Anopheles gambiae] Length = 1229 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ L IE+ +F+ + I + V G NG GKS+ +AI ++ T Sbjct: 5 KMSAFLQCIEVENFKSYRGRTTIGPLKRFSAVIGPNGSGKSNFMDAISFVMGEKT 59 >gi|134297885|ref|YP_001111381.1| recombination protein F [Desulfotomaculum reducens MI-1] gi|172044201|sp|A4J0F3|RECF_DESRM RecName: Full=DNA replication and repair protein recF gi|134050585|gb|ABO48556.1| DNA replication and repair protein RecF [Desulfotomaculum reducens MI-1] Length = 371 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +FR + E Q I + I+ G N GK++L EAI + G + R + Sbjct: 1 MRVKKLSLRNFRNYKEAQFIP-HPSINIITGPNAQGKTNLLEAIYYSLRGCSFRAEKDRD 59 Query: 87 I 87 + Sbjct: 60 V 60 >gi|323483633|ref|ZP_08089017.1| hypothetical protein HMPREF9474_00766 [Clostridium symbiosum WAL-14163] gi|323403060|gb|EGA95374.1| hypothetical protein HMPREF9474_00766 [Clostridium symbiosum WAL-14163] Length = 1069 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + +S F + I +I+F L ++ G G GK+++ +A+ + YG T Sbjct: 1 MKPLKVTMSAFSSYAGITEIDFEKVDHGLFLITGDTGAGKTTIFDAVSFALYGETSSDSR 60 Query: 84 GDSIKKRSI 92 ++ + Sbjct: 61 DGTMMRSQY 69 >gi|295086014|emb|CBK67537.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length = 717 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I I +F+ + E Q +EF+ L ++ G G GKS L A W+ +G Sbjct: 3 IKNITIENFQSYYESQTMEFSKGLNLIIGNGGKGKSKLFNAFYWVLFG 50 >gi|12382276|gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thaliana] Length = 1175 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|253744802|gb|EET00952.1| SMC6 protein [Giardia intestinalis ATCC 50581] Length = 1302 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I++F + ++F +++++G NG GKSS+ +AI ++ G + + Sbjct: 44 YILRLHITNFLTHRDKV-VDFECPVSLIHGPNGAGKSSILQAIHFVLCGK-AKNIRDNCE 101 Query: 88 KKRSIKT 94 K ++KT Sbjct: 102 KFSNLKT 108 >gi|79154018|gb|AAI07892.1| SMC2 protein [Homo sapiens] Length = 291 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|118781930|ref|XP_311953.3| AGAP002947-PA [Anopheles gambiae str. PEST] gi|116129328|gb|EAA07609.3| AGAP002947-PA [Anopheles gambiae str. PEST] Length = 1244 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ L IE+ +F+ + I + V G NG GKS+ +AI ++ T Sbjct: 5 KMSAFLQCIEVENFKSYRGRTTIGPLKRFSAVIGPNGSGKSNFMDAISFVMGEKT 59 >gi|71027371|ref|XP_763329.1| hypothetical protein [Theileria parva strain Muguga] gi|68350282|gb|EAN31046.1| hypothetical protein TP03_0311 [Theileria parva] Length = 992 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +FR + ++ + + + G NG GKS++ A+ ++ D Sbjct: 1 MYIKLIRLKNFRTYKDLTLFSLSPNYNAIVGLNGSGKSNVLLAVSFVLGDSVPGFTRSDY 60 Query: 87 IKKRSIKTPMP 97 + K + P Sbjct: 61 LFKGDQSSTSP 71 >gi|297793811|ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata] gi|297310625|gb|EFH41049.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata] Length = 1175 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F H + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|62990166|ref|NP_032043.3| structural maintenance of chromosomes protein 2 [Mus musculus] gi|62871715|gb|AAH94380.1| Structural maintenance of chromosomes 2 [Mus musculus] gi|122890022|emb|CAM14006.1| structural maintenance of chromosomes 2 [Mus musculus] gi|148670352|gb|EDL02299.1| structural maintenance of chromosomes 2 [Mus musculus] Length = 1191 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|26990687|ref|NP_746112.1| hypothetical protein PP_3982 [Pseudomonas putida KT2440] gi|24985678|gb|AAN69576.1|AE016591_4 hypothetical protein PP_3982 [Pseudomonas putida KT2440] Length = 881 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I FRGF + + L + G NG GK+SL EA+E+ G Sbjct: 86 LSELTIGPFRGFRSPETFDLTKRLILFYGPNGSGKTSLCEALEYALLG 133 >gi|297623341|ref|YP_003704775.1| SMC domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164521|gb|ADI14232.1| SMC domain protein [Truepera radiovictrix DSM 17093] Length = 930 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +E+ F F E+ + F D L ++G G GKS+L +A+ + YG T R Sbjct: 1 MRPLRLELQGFGCFREVTAVSFDDLELFAISGPTGAGKSTLLDAMTYALYGSTARLGR 58 >gi|253578169|ref|ZP_04855441.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850487|gb|EES78445.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 1117 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F + + I+F L +V G G GK+++ + I + YG T Sbjct: 1 MKPLKLTLSAFGPYADETVIDFTQLGGQGLFLVTGDTGAGKTTIFDGITFALYGETSGGV 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 REASMLRSKYAKP 73 >gi|12860408|dbj|BAB31946.1| unnamed protein product [Mus musculus] Length = 284 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|16081317|ref|NP_393635.1| chromosome segregation protein [Thermoplasma acidophilum DSM 1728] gi|18202976|sp|Q9HLR8|RAD50_THEAC RecName: Full=DNA double-strand break repair rad50 ATPase gi|10639302|emb|CAC11304.1| myosin heavy chain (mhcA) related protein [Thermoplasma acidophilum] Length = 896 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + F + I+ G NG GKSS+ +AI + +G + +K D I+ Sbjct: 3 IDRIRLINFLSHEDSEIF-FDTGVNIIVGHNGAGKSSIIDAIRFALFGDKRTKKIEDMIR 61 Query: 89 KRSIKTPMPM 98 K + + M Sbjct: 62 KGAKSLEVEM 71 >gi|117938807|gb|AAH03396.1| SMC2 protein [Homo sapiens] Length = 289 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|327200673|pdb|3QKT|A Chain A, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200674|pdb|3QKT|B Chain B, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200675|pdb|3QKT|C Chain C, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp gi|327200676|pdb|3QKT|D Chain D, Rad50 Abc-Atpase With Adjacent Coiled-Coil Region In Complex With Amp- Pnp Length = 339 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|323692596|ref|ZP_08106829.1| hypothetical protein HMPREF9475_01692 [Clostridium symbiosum WAL-14673] gi|323503462|gb|EGB19291.1| hypothetical protein HMPREF9475_01692 [Clostridium symbiosum WAL-14673] Length = 1069 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + +S F + I +I+FA L ++ G G GK+++ +A+ + YG T Sbjct: 1 MKPLKVTMSAFSSYAGITEIDFAKVDHGLFLITGDTGAGKTTIFDAVSFALYGETSSDSR 60 Query: 84 GDSIKKRSI 92 ++ + Sbjct: 61 DGTMMRSQY 69 >gi|300707231|ref|XP_002995833.1| hypothetical protein NCER_101178 [Nosema ceranae BRL01] gi|239605055|gb|EEQ82162.1| hypothetical protein NCER_101178 [Nosema ceranae BRL01] Length = 972 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + IEI +F+ F I+ + TI+ G+NG GKS++ AI + Sbjct: 1 MHIQKIEIENFKSFKSFTSIDLSPKFTIIIGKNGSGKSNIIHAIRTVI 48 >gi|308487890|ref|XP_003106140.1| CRE-SMC-4 protein [Caenorhabditis remanei] gi|308254714|gb|EFO98666.1| CRE-SMC-4 protein [Caenorhabditis remanei] Length = 1072 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L++E+++F+ + I F T + G NG GKS+L +++ ++F Sbjct: 99 ILNVEVNNFKSYYGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFG 146 >gi|255523807|ref|ZP_05390772.1| RecF/RecN/SMC domain-containing protein [Clostridium carboxidivorans P7] gi|255512510|gb|EET88785.1| RecF/RecN/SMC domain-containing protein [Clostridium carboxidivorans P7] Length = 74 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + I +FRG + EF + + +++ NG GK+++ +AIEW G R I Sbjct: 3 ISSVIIENFRGVEGKKTFEFENRNFILLSASNGKGKTTVIDAIEWCLTGDIGRLSSSYDI 62 Query: 88 KKRSIKTPMPMC 99 + + + C Sbjct: 63 RSTNNEEKKKKC 74 >gi|241691395|ref|XP_002411782.1| SMC protein, putative [Ixodes scapularis] gi|215504627|gb|EEC14121.1| SMC protein, putative [Ixodes scapularis] Length = 1229 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE +F+ + + I F + T + G NG GKS++ +++ ++F GY ++ + Sbjct: 29 ISRIENLNFKSYAGKRVIGPFHKNFTAIVGPNGSGKSNVIDSLLFVF-GYRAQKIRSKKV 87 >gi|218245953|ref|YP_002371324.1| recombination protein F [Cyanothece sp. PCC 8801] gi|257059001|ref|YP_003136889.1| recombination protein F [Cyanothece sp. PCC 8802] gi|226737787|sp|B7K127|RECF_CYAP8 RecName: Full=DNA replication and repair protein recF gi|218166431|gb|ACK65168.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 8801] gi|256589167|gb|ACV00054.1| DNA replication and repair protein RecF [Cyanothece sp. PCC 8802] Length = 380 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + +S FR + E Q+IEF TI+ G N GKS++ EA+E L + R Sbjct: 1 MYLKTLHLSAFRNYRE-QQIEFDHQKTILLGNNAQGKSNVLEAVELLATLKSHRTNRD 57 >gi|158711736|ref|NP_001102136.2| structural maintenance of chromosomes protein 2 [Rattus norvegicus] Length = 1191 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|321258803|ref|XP_003194122.1| subunit of the condensin complex; Smc4p [Cryptococcus gattii WM276] gi|317460593|gb|ADV22335.1| Subunit of the condensin complex, putative; Smc4p [Cryptococcus gattii WM276] Length = 1548 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q+I F + + G NG GKS+ +A+ ++F + + G Sbjct: 248 IHKLVLVNFKSYAGRQEIGPFHKSFSAIVGPNGSGKSNTIDALLFVFGYRASKMRQG 304 >gi|307181547|gb|EFN69109.1| Structural maintenance of chromosomes protein 1A [Camponotus floridanus] Length = 1229 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I T V G NG GKS+ +AI ++ T Sbjct: 5 LKHIEVENFKSYKGKLIIGPLKSFTAVVGPNGSGKSNFMDAISFVMGEKT 54 >gi|313680123|ref|YP_004057862.1| smc domain protein [Oceanithermus profundus DSM 14977] gi|313152838|gb|ADR36689.1| SMC domain protein [Oceanithermus profundus DSM 14977] Length = 897 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L +++ F F ++F+D L + G G GK++L +A+ + YG T R Sbjct: 1 MRPLRLDLEGFGAFARHASVDFSDVELFAITGPTGSGKTTLLDAMTFALYGETPRMGRK 59 >gi|256962366|ref|ZP_05566537.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|293385316|ref|ZP_06631129.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293386572|ref|ZP_06631155.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312908106|ref|ZP_07767086.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312979001|ref|ZP_07790721.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256952862|gb|EEU69494.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|291077422|gb|EFE14786.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291083977|gb|EFE20940.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310625917|gb|EFQ09200.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311288180|gb|EFQ66736.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 700 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 + ++EI +FRGF KI + + ++ GQN GK+++ +A+E LF ++++ GD Sbjct: 1 MFISELEIENFRGFNYKTKILLNNSINVLIGQNNSGKTTIIKAMELLFSDGSKKKLSVGD 60 Query: 86 SIKKRSIKTPMPM 98 K +I + Sbjct: 61 FYKNITIDDIKAL 73 >gi|242079535|ref|XP_002444536.1| hypothetical protein SORBIDRAFT_07g023430 [Sorghum bicolor] gi|241940886|gb|EES14031.1| hypothetical protein SORBIDRAFT_07g023430 [Sorghum bicolor] Length = 1253 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + Q I F D T + G NG GKS+L +AI ++ + G + Sbjct: 22 IDRLVVENFKSYKGEQTIGPFVD-FTAIIGPNGAGKSNLMDAISFVLGVRSA-HLRGAQL 79 Query: 88 KKR 90 K Sbjct: 80 KDL 82 >gi|301093678|ref|XP_002997684.1| chromosome segregation protein, putative [Phytophthora infestans T30-4] gi|262109933|gb|EEY67985.1| chromosome segregation protein, putative [Phytophthora infestans T30-4] Length = 1211 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + FR + + + F++ +V G+NG GKS+ +AI + D Sbjct: 1 MHIKQVIVCGFRSYKDQVAVAPFSNQHNVVIGRNGTGKSNFFDAIRFGLLTSRFANLRPD 60 >gi|66506890|ref|XP_395059.2| PREDICTED: structural maintenance of chromosomes protein 1A isoform 1 [Apis mellifera] Length = 1230 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I T V G NG GKS+ +AI ++ T Sbjct: 5 LKHIEVENFKSYKGKLIIGPLKSFTAVVGPNGSGKSNFMDAISFVMGEKT 54 >gi|329117358|ref|ZP_08246075.1| DNA replication and repair protein RecF [Streptococcus parauberis NCFD 2020] gi|326907763|gb|EGE54677.1| DNA replication and repair protein RecF [Streptococcus parauberis NCFD 2020] Length = 364 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++HFR + ++ I F++ L I G N GK+++ EAI ++ + R + Sbjct: 1 MWLKELTLNHFRNYNDLN-INFSEGLNIFIGNNAQGKTNILEAIYFIALTRSHRTRSDKE 59 Query: 87 IKKRSIK 93 + + S Sbjct: 60 LIQFSTD 66 >gi|290992671|ref|XP_002678957.1| structural maintenance of chromosome 4 [Naegleria gruberi] gi|284092572|gb|EFC46213.1| structural maintenance of chromosome 4 [Naegleria gruberi] Length = 858 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE+ +F+ + + + F L + G NG GKS++ ++I ++ G+ + ++ Sbjct: 403 IHSIEMKNFKSYKDNTLVGPFTTGLNCIIGSNGSGKSNIIDSICFVL-GFESKELRAKNL 461 >gi|225375886|ref|ZP_03753107.1| hypothetical protein ROSEINA2194_01522 [Roseburia inulinivorans DSM 16841] gi|225212321|gb|EEG94675.1| hypothetical protein ROSEINA2194_01522 [Roseburia inulinivorans DSM 16841] Length = 930 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + +S F + I+F + ++ G G GK+++ +AI + Y T + Sbjct: 1 MKPLKLTMSAFGSYAGKNVIDFTGQQQGIFLITGDTGAGKTTIFDAITYALYNQTSGGER 60 Query: 84 GDSIKKRSIKTP 95 ++ + P Sbjct: 61 NGNMMRSQYAQP 72 >gi|91088785|ref|XP_967679.1| PREDICTED: similar to structural maintenance of chromosomes protein 1A [Tribolium castaneum] gi|270011628|gb|EFA08076.1| hypothetical protein TcasGA2_TC005672 [Tribolium castaneum] Length = 1222 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L IE+ +F+ + + I V G NG GKS+ +AI ++ TQ Sbjct: 4 RLKHIEVENFKSYKGHRIIGPLKPFNAVIGPNGSGKSNFMDAISFVMGEKTQ 55 >gi|166032887|ref|ZP_02235716.1| hypothetical protein DORFOR_02608 [Dorea formicigenerans ATCC 27755] gi|166027244|gb|EDR46001.1| hypothetical protein DORFOR_02608 [Dorea formicigenerans ATCC 27755] Length = 361 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +++ +FR + E+ +EF D I G N GK+++ EA+ + R Sbjct: 1 MKIKSLKLKNFRNY-ELLNLEFDDSTNIFYGDNAQGKTNILEAVYLSGTTKSHRGSKDRD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 MIRFGAE 66 >gi|310790618|gb|EFQ26151.1| RecF/RecN/SMC N terminal domain-containing protein [Glomerella graminicola M1.001] Length = 1253 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHILLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSAH 61 Query: 87 IKKRSIK 93 +K + Sbjct: 62 LKDLVYR 68 >gi|238497153|ref|XP_002379812.1| chromosome segregation protein SudA, putative [Aspergillus flavus NRRL3357] gi|220694692|gb|EED51036.1| chromosome segregation protein SudA, putative [Aspergillus flavus NRRL3357] Length = 1199 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLG 50 >gi|194333293|ref|YP_002015153.1| SMC domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311111|gb|ACF45506.1| SMC domain protein [Prosthecochloris aestuarii DSM 271] Length = 877 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 I +L + + FRGFT + + + +T+V G NG GKSS EA+E G Sbjct: 80 IGRLHQLIVGPFRGFTNQEIFDLSKPITLVYGANGTGKSSFCEALETALLGSI 132 >gi|238814365|ref|NP_001154943.1| structural maintenance of chromosomes 2 [Nasonia vitripennis] Length = 1177 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I F+ + + +I F + G NG GKS++ ++I ++ Sbjct: 1 MYIKSMVIEGFKSYGKRVEINGFDREFNAITGLNGSGKSNILDSICFVLGISNLSNVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K+ Sbjct: 61 NLQELVYKS 69 >gi|255280427|ref|ZP_05344982.1| putative exonuclease SbcC [Bryantella formatexigens DSM 14469] gi|255268892|gb|EET62097.1| putative exonuclease SbcC [Bryantella formatexigens DSM 14469] Length = 752 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + +I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MRPLKLVMSAFGPYAGKTEIDFEKLGTQGLYLITGDTGAGKTTIFDAIIFALYGEASGSF 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 RDASMFRSKYALP 73 >gi|117620939|ref|YP_856566.1| RecF/RecN/SMC family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562346|gb|ABK39294.1| RecF/RecN/SMC family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 556 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EWL 73 T YY + F L +I + +FR F + K+ ++T+ G NG GK+++ +AI W+ Sbjct: 61 TEYYVPENRFVLSEINLVNFRRF-DSIKVRLESNVTVFIGGNGIGKTTIIDAISKVLSWI 119 Query: 74 FYGYTQRRKHGDSIKKRSI 92 G + K+G IK + I Sbjct: 120 VSGIEKEGKNGSPIKYQEI 138 >gi|46124753|ref|XP_386930.1| hypothetical protein FG06754.1 [Gibberella zeae PH-1] Length = 1202 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSSKTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|282898117|ref|ZP_06306112.1| Exonuclease SbcC [Raphidiopsis brookii D9] gi|281197261|gb|EFA72162.1| Exonuclease SbcC [Raphidiopsis brookii D9] Length = 1005 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F + + ++F H + G NG GKSSL E+I W +G ++ D I Sbjct: 5 RLILKNFLSYRDAT-LDFTGLHTACICGPNGAGKSSLLESITWAIWGQSRANIEDDVI 61 >gi|260886534|ref|ZP_05897797.1| hypothetical ATP-binding protein [Selenomonas sputigena ATCC 35185] gi|330839624|ref|YP_004414204.1| SMC domain protein [Selenomonas sputigena ATCC 35185] gi|260863677|gb|EEX78177.1| hypothetical ATP-binding protein [Selenomonas sputigena ATCC 35185] gi|329747388|gb|AEC00745.1| SMC domain protein [Selenomonas sputigena ATCC 35185] Length = 429 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY------GYTQR 80 + +++ +FR F E I+F T++ G NG GKSS+ +A+ G Sbjct: 1 MYIKRLQLENFRCF-EQLTIDFPKDYTVLIGGNGAGKSSILDAVAIAMASFLAGCGIQAA 59 Query: 81 RKHGDSIKKRSIKTPM 96 H ++ + Sbjct: 60 NFHKTDVRFLTYTYEK 75 >gi|260437692|ref|ZP_05791508.1| DNA replication and repair protein RecF [Butyrivibrio crossotus DSM 2876] gi|292809918|gb|EFF69123.1| DNA replication and repair protein RecF [Butyrivibrio crossotus DSM 2876] Length = 361 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR + E +KIEF ++ I+ G N GK+++ EAI + + I Sbjct: 3 IKSIDLQNFRNY-ETEKIEFDENTNILYGDNAQGKTNILEAIFLSGTSKSHKGSKDSEII 61 >gi|292655017|ref|YP_003534914.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii DS2] gi|49036440|sp|P62133|RAD50_HALVO RecName: Full=DNA double-strand break repair rad50 ATPase gi|46309119|emb|CAG25775.1| DNA double-strand break repair Rad50 ATPase [Haloferax volcanii] gi|291371675|gb|ADE03902.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii DS2] Length = 893 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I I +F+ + E +++ D +T+++G NG GKSSL EA + YG Sbjct: 1 MRFTRIAIRNFKPY-EDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKA 52 >gi|291087026|ref|ZP_06345187.2| putative RecF/RecN/SMC N domain protein [Clostridium sp. M62/1] gi|291076242|gb|EFE13606.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. M62/1] Length = 1054 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 34 ISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +S F + + +I+F D + ++ G G GK+++ +AI + YG T ++ S+ + Sbjct: 1 MSAFGSYLKQTEIDFEALGDGIFLITGDTGAGKTTIFDAIAFALYGETSGQRRDGSMMRS 60 Query: 91 SIKTPMP 97 P Sbjct: 61 QSALPKQ 67 >gi|169774329|ref|XP_001821632.1| chromosome segregation protein sudA [Aspergillus oryzae RIB40] gi|83769495|dbj|BAE59630.1| unnamed protein product [Aspergillus oryzae] Length = 1199 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLG 50 >gi|170289870|ref|YP_001736686.1| SMC domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170173950|gb|ACB07003.1| SMC domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 758 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +F+ F + I L + G NG GKS++ +AI +L G+ +R Sbjct: 1 MMIEELQLINFKSF-KRATIVIPKGLIAITGPNGSGKSNILDAIAFLM-GWRAKRLRASR 58 Query: 87 IK 88 ++ Sbjct: 59 LE 60 >gi|300783637|ref|YP_003763928.1| exonuclease SbcC [Amycolatopsis mediterranei U32] gi|299793151|gb|ADJ43526.1| exonuclease SbcC [Amycolatopsis mediterranei U32] Length = 961 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E++ F F E ++ F D + G G GKS++ +A+ + YG R Sbjct: 3 LEMTGFASFREKTEVSFEDTDYFALVGPTGAGKSTVIDALTFALYGSVAR 52 >gi|220927463|ref|YP_002504372.1| DNA replication and repair protein RecF [Clostridium cellulolyticum H10] gi|254790470|sp|B8I3R5|RECF_CLOCE RecName: Full=DNA replication and repair protein recF gi|219997791|gb|ACL74392.1| DNA replication and repair protein RecF [Clostridium cellulolyticum H10] Length = 372 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + ++R T +I F+D I G NG GK+++ EAI G + R + Sbjct: 3 VKNLVLENYRNHT-NTRILFSDRFNIFYGDNGQGKTNILEAIYLCASGRSHRTSRDSELI 61 Query: 89 KRSIK 93 K + Sbjct: 62 KFGCE 66 >gi|28492970|ref|NP_787131.1| recombination protein F [Tropheryma whipplei str. Twist] gi|28572178|ref|NP_788958.1| DNA replication and repair protein recF [Tropheryma whipplei TW08/27] gi|51316419|sp|Q83N51|RECF_TROWT RecName: Full=DNA replication and repair protein recF gi|51316420|sp|Q83NZ4|RECF_TROW8 RecName: Full=DNA replication and repair protein recF gi|28410309|emb|CAD66695.1| DNA replication and repair protein recF [Tropheryma whipplei TW08/27] gi|28476010|gb|AAO44100.1| recF protein [Tropheryma whipplei str. Twist] Length = 363 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +FR + E Q I F D L ++ G NG GK++L+EAI +L + R + Sbjct: 6 ISHINLRNFRNY-EYQSISFTDGLNLIRGDNGQGKTNLAEAIYFLSGFGSHRTYKNQPLI 64 Query: 89 KRSIK 93 K + Sbjct: 65 KSGEQ 69 >gi|306820917|ref|ZP_07454537.1| recombination protein F [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551031|gb|EFM39002.1| recombination protein F [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 356 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I + ++R + E ++F++++ ++ GQNG GK+++ EA+ +L + + R Sbjct: 1 MQINNINLKNYRNY-ENLSLDFSENINMIIGQNGQGKTNIVEAVHFLSFAKSFRTNRDKE 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 VINFGKDS 67 >gi|284040343|ref|YP_003390273.1| DNA replication and repair protein RecF [Spirosoma linguale DSM 74] gi|283819636|gb|ADB41474.1| DNA replication and repair protein RecF [Spirosoma linguale DSM 74] Length = 368 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + +++F+ + E + F+ + ++ G NG GK++L +A+ +L + Sbjct: 1 MHLEKLSLTNFKNY-EDVRYTFSRQVNVLVGPNGSGKTNLLDAVYFLSLSKSA 52 >gi|167521305|ref|XP_001744991.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776605|gb|EDQ90224.1| predicted protein [Monosiga brevicollis MX1] Length = 1214 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +I I F+ + + +F + G NG GKS++ +AI ++ + ++ Sbjct: 1 MQEIIIDGFKSYAHRTVVPDFDPLFNAITGLNGSGKSNILDAICFVLGISNLSQVRAGNL 60 Query: 88 KKRSIKT 94 + K Sbjct: 61 QDLVYKQ 67 >gi|307103262|gb|EFN51524.1| hypothetical protein CHLNCDRAFT_59234 [Chlorella variabilis] Length = 1206 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + + I F V G NG GKS++ ++I ++ ++ + Sbjct: 1 MWVREVTIDGFKSYAQRAVIGPFDSQFNAVTGLNGSGKSNILDSICFVLGIQNLQQVRAN 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|306834801|ref|ZP_07467865.1| recombination protein F [Corynebacterium accolens ATCC 49726] gi|304569329|gb|EFM44830.1| recombination protein F [Corynebacterium accolens ATCC 49726] Length = 397 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ K+E +T+ G+NG+GK+++ EA+ + + + R H Sbjct: 1 MFIRDLDVRDFRSWPEL-KLELGPGITLFVGRNGFGKTNIVEAVGYTAHLSSHRVSHDSP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ ++ AV Sbjct: 60 LVRQGAQSARVSLTAV 75 >gi|293376097|ref|ZP_06622348.1| putative DNA sulfur modification protein DndD [Turicibacter sanguinis PC909] gi|292645299|gb|EFF63358.1| putative DNA sulfur modification protein DndD [Turicibacter sanguinis PC909] Length = 666 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K I I +FR F+ +EF+ +LTI++ NG GK++L +A W YG + Sbjct: 1 MKFKSINIINFRQFSGENLLEFSVNDEKNLTIIHAMNGSGKTTLLQAFNWCLYGK-MKLP 59 Query: 83 HGDSIKKRSIKTPMPMCMAVP 103 D I +I + ++P Sbjct: 60 DPDKIINETIFQQLEKHSSLP 80 >gi|227502244|ref|ZP_03932293.1| recombination protein F [Corynebacterium accolens ATCC 49725] gi|227077068|gb|EEI15031.1| recombination protein F [Corynebacterium accolens ATCC 49725] Length = 396 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ K+E +T+ G+NG+GK+++ EA+ + + + R H Sbjct: 1 MFIRDLDVRDFRSWPEL-KLELGPGITLFVGRNGFGKTNIVEAVGYTAHLSSHRVSHDSP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ ++ AV Sbjct: 60 LVRQGAQSARVSLTAV 75 >gi|172037526|ref|YP_001804027.1| recombination protein F [Cyanothece sp. ATCC 51142] gi|254790472|sp|B1WT39|RECF_CYAA5 RecName: Full=DNA replication and repair protein recF gi|171698980|gb|ACB51961.1| DNA repair and genetic recombination protein [Cyanothece sp. ATCC 51142] Length = 380 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + FR + E Q ++ TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKHIHLYGFRNYHE-QTLDLQSQKTILLGNNAQGKSNLLEAVELLATLKSHRTNRDRD 59 Query: 87 IKKRSIKTPMPMCM 100 + KT + M Sbjct: 60 LILEGKKTGQILAM 73 >gi|167522549|ref|XP_001745612.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775961|gb|EDQ89583.1| predicted protein [Monosiga brevicollis MX1] Length = 177 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + +Q++ F + V G NG GKS++ +A+ ++F GY ++ + Sbjct: 2 ITHMRMENFKSYLGVQEVGPFHQCFSSVVGPNGSGKSNVIDALLFVF-GYRAKKIRQAKL 60 Query: 88 KKRSIKTPMPMCM 100 K K+ + Sbjct: 61 KDLIHKSEGHTNL 73 >gi|66531869|ref|XP_396284.2| PREDICTED: structural maintenance of chromosomes protein 2 [Apis mellifera] Length = 1177 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +I +F + G NG GKS++ +AI ++ + Sbjct: 1 MYIKSMVLEGFKSYGKRIEINDFNKEFNAITGFNGSGKSNILDAICFVLGISNLGQVRAT 60 Query: 86 SIKKRSIKT 94 S++ K+ Sbjct: 61 SLQDLVYKS 69 >gi|328876060|gb|EGG24424.1| structural maintenance of chromosome protein [Dictyostelium fasciculatum] Length = 1957 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 25 LIFKLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + I+I F+ + ++ F+ ++ G+NG GKS+L AI +L ++ Sbjct: 541 IMVFIKLIKIEGFKSYKHLDLSSTSFSPGFNVITGRNGSGKSNLFAAIRFLLGDWSNLSL 600 >gi|37521974|ref|NP_925351.1| recombination protein F [Gloeobacter violaceus PCC 7421] gi|51316323|sp|Q7NHY0|RECF_GLOVI RecName: Full=DNA replication and repair protein recF gi|35212973|dbj|BAC90346.1| DNA repair and genetic recombination protein [Gloeobacter violaceus PCC 7421] Length = 375 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + E +E TI+ G N GKS+L EA++ L G + R Sbjct: 1 MFLRSVQLHDFRNYAE-ADLELTSPKTILVGDNAQGKSNLLEAVQLLATGRSTRALRDRE 59 Query: 87 IKKRSIKTPM 96 + R + Sbjct: 60 LIARGKEQAR 69 >gi|297685015|ref|XP_002820101.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-like [Pongo abelii] Length = 1198 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|212527382|ref|XP_002143848.1| chromosome segregation protein SudA, putative [Penicillium marneffei ATCC 18224] gi|210073246|gb|EEA27333.1| chromosome segregation protein SudA, putative [Penicillium marneffei ATCC 18224] Length = 1199 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|313900878|ref|ZP_07834368.1| DNA replication and repair protein RecF [Clostridium sp. HGF2] gi|312954298|gb|EFR35976.1| DNA replication and repair protein RecF [Clostridium sp. HGF2] Length = 366 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +FR + ++ + F D + I+ G+N GK++L E+I +L + R Sbjct: 1 MRLESLRLHNFRNYADVN-VSFTDGIHILTGKNAQGKTNLLESILYLSTTRSHRTSEDKD 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 LIKEGEQ 66 >gi|301093748|ref|XP_002997719.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] gi|262109968|gb|EEY68020.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] Length = 1183 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ +AI ++ + + Sbjct: 1 MHIEEIILDGFKSYATRTVVSGFDPRFNAITGLNGSGKSNVLDAICFVLGITNLSQVRAN 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|242059587|ref|XP_002458939.1| hypothetical protein SORBIDRAFT_03g043060 [Sorghum bicolor] gi|241930914|gb|EES04059.1| hypothetical protein SORBIDRAFT_03g043060 [Sorghum bicolor] Length = 1175 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ + F+ + + F + G NG GKS++ ++I ++ R+ Sbjct: 1 MHIKEVTLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|321478769|gb|EFX89726.1| structural maintenance of chromosome protein 2 [Daphnia pulex] Length = 1195 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +I F + G NG GKS++ +AI +L Sbjct: 1 MYIKSMVVDGFKSYGQRTEINGFDPMFNAITGLNGSGKSNILDAICFLLGITNLSHVRAT 60 Query: 86 SIKKRSIKT 94 ++++ K+ Sbjct: 61 NLQELVYKS 69 >gi|313227430|emb|CBY22577.1| unnamed protein product [Oikopleura dioica] Length = 1237 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +EI F+ + K+ T + G NG GKS+L +AI ++ + Sbjct: 4 LEYLEIEDFKSYKGKIKVGPFHKFTAIIGPNGSGKSNLMDAISFVLGEKS 53 >gi|291543777|emb|CBL16886.1| hypothetical protein RUM_06770 [Ruminococcus sp. 18P13] Length = 660 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +FR F + F+ ++T++ G N +GK++L +A W FYG + Sbjct: 1 MLIKTLRMENFRQFKGTTNVSFSVDPKQNVTVILGDNTFGKTTLLQAFNWCFYGIAKFDH 60 Query: 83 HGDSIKKRSIKTPM 96 + D + I + M Sbjct: 61 NPDMLLNLEIASEM 74 >gi|330943475|gb|EGH45818.1| RecF/RecN/SMC N domain protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 636 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + L +++ F+ F E IEF D L ++ G+NG GK+ + AI LF Sbjct: 1 MFMYLRALDVDGFKCFGEPFTIEFHDGLNVLVGENGAGKTGVISAIRQLF 50 >gi|168217095|ref|ZP_02642720.1| DNA sulfur modification protein DndD [Clostridium perfringens NCTC 8239] gi|182380778|gb|EDT78257.1| DNA sulfur modification protein DndD [Clostridium perfringens NCTC 8239] Length = 718 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +I + +FR + + F + + ++ G+NG GKS+L EAI+ YG T G Sbjct: 3 INNITLKNFRSYEDETTFSFTPNGNKNIVLIGGENGAGKSTLFEAIKLCIYGPTTYGYLG 62 Query: 85 DS 86 ++ Sbjct: 63 NN 64 >gi|171463266|ref|YP_001797379.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192804|gb|ACB43765.1| chromosome segregation protein SMC [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 1152 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 L V G NG GKS++ +A+ W+ G+S++ Sbjct: 4 QLIGVVGPNGCGKSNIIDAVRWVLGESRASELRGESMQD 42 >gi|193785557|dbj|BAG50923.1| unnamed protein product [Homo sapiens] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|218782621|ref|YP_002433939.1| hypothetical protein Dalk_4794 [Desulfatibacillum alkenivorans AK-01] gi|218764005|gb|ACL06471.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 696 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + I +FR F + +IEFA +T+ +G NG GK++L A W YG T Sbjct: 1 MNLIALRIENFRQFYGVHEIEFAKGNQDQNVTVFHGYNGSGKTALLNAFIWCLYGET 57 >gi|158258635|dbj|BAF85288.1| unnamed protein product [Homo sapiens] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|260907422|ref|ZP_05915744.1| hypothetical protein BlinB_18945 [Brevibacterium linens BL2] Length = 882 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K I + ++RG + ++EF D +T+V G N GKSS+ EAI T R+ S Sbjct: 1 MKFHSIHLRNYRGIAD-SRVEFGDGVTVVEGPNEVGKSSIHEAI-------THLREDKSS 52 Query: 87 IKKRSIKTPMPM 98 +K S+K P+ Sbjct: 53 SRKASVKETQPV 64 >gi|37522431|ref|NP_925808.1| hypothetical protein glr2862 [Gloeobacter violaceus PCC 7421] gi|35213432|dbj|BAC90803.1| glr2862 [Gloeobacter violaceus PCC 7421] Length = 1002 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +S+F + + +++F H + G NG GKSSL EA+ W+ +G ++ D ++ Sbjct: 4 LHLSLSNFLSYRDG-RLDFSGIHTACICGANGSGKSSLLEALTWVLWGKSRADSDDDVVR 62 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + + + + + + ++++ Sbjct: 63 RGATEARVDLTFSCEGQRFRI 83 >gi|110347418|ref|NP_006435.2| structural maintenance of chromosomes protein 2 [Homo sapiens] gi|110347420|ref|NP_001036015.1| structural maintenance of chromosomes protein 2 [Homo sapiens] gi|110347425|ref|NP_001036016.1| structural maintenance of chromosomes protein 2 [Homo sapiens] gi|215273886|sp|O95347|SMC2_HUMAN RecName: Full=Structural maintenance of chromosomes protein 2; Short=SMC protein 2; Short=SMC-2; AltName: Full=Chromosome-associated protein E; Short=hCAP-E; AltName: Full=XCAP-E homolog gi|42627769|tpe|CAD89875.1| TPA: SMC2 protein [Homo sapiens] gi|55957990|emb|CAI16866.1| structural maintenance of chromosomes 2 [Homo sapiens] gi|55958454|emb|CAI16923.1| structural maintenance of chromosomes 2 [Homo sapiens] gi|57997175|emb|CAI46187.1| hypothetical protein [Homo sapiens] gi|119579377|gb|EAW58973.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|119579379|gb|EAW58975.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|119579381|gb|EAW58977.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|120659846|gb|AAI30386.1| Structural maintenance of chromosomes 2 [Homo sapiens] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|326381660|ref|ZP_08203354.1| hypothetical protein SCNU_01895 [Gordonia neofelifaecis NRRL B-59395] gi|326199907|gb|EGD57087.1| hypothetical protein SCNU_01895 [Gordonia neofelifaecis NRRL B-59395] Length = 794 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I + FRG + + +T+V+G+NG GKSS +EA+E+ G + R Sbjct: 43 YVRSIAVEGFRGIGARATLNVSPRPGITVVSGRNGSGKSSFAEALEFAITGKSYR 97 >gi|302677831|ref|XP_003028598.1| hypothetical protein SCHCODRAFT_83108 [Schizophyllum commune H4-8] gi|300102287|gb|EFI93695.1| hypothetical protein SCHCODRAFT_83108 [Schizophyllum commune H4-8] Length = 1127 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ + F+ + +I+ + + G NG GKS++ +AI + ++ Sbjct: 1 MRITELVLEGFKSYPVRTRIDGWDPSFNAITGLNGSGKSNILDAICFALGINNMQQMRAA 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 TLQDLIYK 68 >gi|219518159|gb|AAI44164.1| SMC2 protein [Homo sapiens] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|242783568|ref|XP_002480213.1| chromosome segregation protein SudA, putative [Talaromyces stipitatus ATCC 10500] gi|218720360|gb|EED19779.1| chromosome segregation protein SudA, putative [Talaromyces stipitatus ATCC 10500] Length = 1199 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|109110705|ref|XP_001110075.1| PREDICTED: structural maintenance of chromosomes protein 2-like isoform 1 [Macaca mulatta] gi|109110707|ref|XP_001110214.1| PREDICTED: structural maintenance of chromosomes protein 2-like isoform 4 [Macaca mulatta] gi|109110711|ref|XP_001110295.1| PREDICTED: structural maintenance of chromosomes protein 2-like isoform 6 [Macaca mulatta] gi|297270473|ref|XP_002800070.1| PREDICTED: structural maintenance of chromosomes protein 2-like [Macaca mulatta] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|38304051|gb|AAH61906.1| SMC2 protein [Homo sapiens] Length = 212 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|332222395|ref|XP_003260355.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 1 [Nomascus leucogenys] gi|332222397|ref|XP_003260356.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 2 [Nomascus leucogenys] gi|332222399|ref|XP_003260357.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 3 [Nomascus leucogenys] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|163814984|ref|ZP_02206371.1| hypothetical protein COPEUT_01137 [Coprococcus eutactus ATCC 27759] gi|158449667|gb|EDP26662.1| hypothetical protein COPEUT_01137 [Coprococcus eutactus ATCC 27759] Length = 369 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE++++R + K+EF + I+ G N GK+++ E+I + R Sbjct: 5 MYIESIELNNYRNYR-KLKVEFGKNTNILYGNNAQGKTNILESIYMAATTKSHRGTKDRD 63 Query: 87 IKKRSIK 93 I + Sbjct: 64 IIRIGED 70 >gi|126334861|ref|XP_001374808.1| PREDICTED: similar to SMC2 protein [Monodelphis domestica] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|114625950|ref|XP_001137286.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 8 [Pan troglodytes] gi|114625952|ref|XP_001137366.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 9 [Pan troglodytes] gi|114625954|ref|XP_001137448.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 10 [Pan troglodytes] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|328770435|gb|EGF80477.1| hypothetical protein BATDEDRAFT_16684 [Batrachochytrium dendrobatidis JAM81] Length = 1246 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ +++ +F+ + Q + + T V G NG GKS+L +AI ++ G ++ Sbjct: 4 LIQLDVENFKSYKGKQTLGPFYNFTAVIGPNGSGKSNLMDAISFVL-GVKSSHLRSTQLR 62 Query: 89 KRSIK 93 + Sbjct: 63 DLIYR 67 >gi|209522791|ref|ZP_03271349.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496840|gb|EDZ97137.1| SMC domain protein [Arthrospira maxima CS-328] Length = 1044 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIE 71 +S ++S Y R +I + + + +F + + ++F H + G NG GKSSL EAI Sbjct: 8 ISNGISSEY-RDMIPQ--KLTLKNFLSYRD-ASLDFSGLHTACICGPNGAGKSSLLEAIA 63 Query: 72 WLFYGYTQRRKHGDSIK 88 W +G+++ D I+ Sbjct: 64 WSIWGHSRAGTEDDLIQ 80 >gi|156051446|ref|XP_001591684.1| hypothetical protein SS1G_07130 [Sclerotinia sclerotiorum 1980] gi|154704908|gb|EDO04647.1| hypothetical protein SS1G_07130 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1262 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E+ +F+ + + F D T + G NG GKS+ +AI ++ G Sbjct: 3 KLQRLELFNFKSYKGHHVLLFGDSYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSAQ 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|332027986|gb|EGI68037.1| Structural maintenance of chromosomes protein 2 [Acromyrmex echinatior] Length = 1177 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + +I F + G NG GKS++ +AI ++ + Sbjct: 1 MYIKSIVLEGFKSYGKRIEINGFDKEFNAITGFNGSGKSNILDAICFVLGITNLGQVRAT 60 Query: 86 SIKKRSIKT 94 S++ K+ Sbjct: 61 SLQDLVYKS 69 >gi|225851450|ref|YP_002731684.1| chromosome segregation protein SMC [Persephonella marina EX-H1] gi|225645745|gb|ACO03931.1| chromosome segregation protein SMC [Persephonella marina EX-H1] Length = 1162 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I + F+ + + I + + G NG GKS++ ++I + T + Sbjct: 5 YIDRIHVYGFKSYGLRKLTIPVGNGFVGIVGPNGSGKSNIGDSIVFALGLATAKSMR 61 >gi|327200677|pdb|3QKU|A Chain A, Mre11 Rad50 Binding Domain In Complex With Rad50 And Amp-Pnp gi|327200678|pdb|3QKU|B Chain B, Mre11 Rad50 Binding Domain In Complex With Rad50 And Amp-Pnp Length = 359 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|226356599|ref|YP_002786339.1| exonuclease sbcCD subunit C [Deinococcus deserti VCD115] gi|226318589|gb|ACO46585.1| putative Exonuclease sbcCD, subunit C [Deinococcus deserti VCD115] Length = 911 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +++ F F + ++F D L + G G GKSSL +A+ + YG+T+ R G Sbjct: 1 MRPVRLDLQGFTAFRQYTTLDFTDLELFALVGPTGSGKSSLLDAMTFALYGHTE-RLGGS 59 Query: 86 SIKKRSIKTPMPMCMAV 102 + + + +++ Sbjct: 60 GLDALISQGERGLNVSL 76 >gi|309807875|ref|ZP_07701807.1| putative recombination protein F [Lactobacillus iners LactinV 01V1-a] gi|308168977|gb|EFO71063.1| putative recombination protein F [Lactobacillus iners LactinV 01V1-a] Length = 347 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|302673327|ref|XP_003026350.1| hypothetical protein SCHCODRAFT_79843 [Schizophyllum commune H4-8] gi|300100032|gb|EFI91447.1| hypothetical protein SCHCODRAFT_79843 [Schizophyllum commune H4-8] Length = 1334 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + +F+ + Q I F + + G NG GKS+ +A+ ++F Sbjct: 84 IHKLTLVNFKSYAGKQVIGPFHKSFSAIVGPNGSGKSNTIDALLFVFG 131 >gi|3851584|gb|AAC72360.1| chromosome-associated protein-E [Homo sapiens] Length = 1197 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|323448058|gb|EGB03962.1| hypothetical protein AURANDRAFT_72635 [Aureococcus anophagefferens] Length = 1259 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I IS FR F + IE F + G+NG GKS+ +A++++ + Sbjct: 5 LSIKTISISGFRSFRQQDAIESFDPGHNALIGRNGSGKSNFFDAVQFVLLSPRFYNLRQE 64 Query: 86 SIKKRS 91 ++R+ Sbjct: 65 ERQQRA 70 >gi|289618530|emb|CBI55254.1| putative SMC3 protein [Sordaria macrospora] Length = 1199 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MHIKQIIIQGFKSYKEQTVIEPFSAGTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|149020177|gb|EDL78166.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (predicted) [Rattus norvegicus] Length = 868 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|58198683|gb|AAW65985.1| chromosome-associated protein E [Homo sapiens] Length = 760 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|237708924|ref|ZP_04539405.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456986|gb|EEO62707.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 484 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---- 82 + +I+IS+FR F E + F + + ++ G N GKS+L A+ + RR Sbjct: 1 MYIKEIKISNFRNFKE-ASVPFHEGVNVIIGHNNTGKSNLLRAMGLVLGRSDGRRLDTSD 59 Query: 83 --HGDSIKKRSIKTPM 96 + + ++P Sbjct: 60 LFYETDVATLQQQSPR 75 >gi|219851998|ref|YP_002466430.1| hypothetical protein Mpal_1376 [Methanosphaerula palustris E1-9c] gi|219546257|gb|ACL16707.1| hypothetical protein Mpal_1376 [Methanosphaerula palustris E1-9c] Length = 663 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKH 83 + I IS++R + IQ ++ + +++++ G+NG GKS+L AI W YG T + Sbjct: 5 ISSISISNYRQYYGIQTLDIKNDKIKNVSLILGKNGAGKSNLLNAITWCLYGIETHKS-- 62 Query: 84 GDSIKKRSIKTPMPM 98 K S T MP+ Sbjct: 63 ----KDISDSTGMPI 73 >gi|114625962|ref|XP_001136663.1| PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 1 [Pan troglodytes] gi|114625964|ref|XP_001136738.1| PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 2 [Pan troglodytes] Length = 760 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|329569637|gb|EGG51403.1| RecF/RecN/SMC protein [Enterococcus faecalis TX1467] Length = 485 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 27/50 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I++S+F+ F I+ + + G N GK+++ +AIE++ G Sbjct: 1 MYISKIKLSNFKSFRGKHTIDLSKGVNFFVGNNNCGKTTIFKAIEFIQSG 50 >gi|224139208|ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa] gi|222834117|gb|EEE72594.1| condensin complex components subunit [Populus trichocarpa] Length = 1176 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + ++ F + G NG GKS++ ++I ++ ++ Sbjct: 1 MYVKEICLEGFKSYATRTVVQGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|325842999|ref|ZP_08167846.1| putative DNA sulfur modification protein DndD [Turicibacter sp. HGF1] gi|325489462|gb|EGC91831.1| putative DNA sulfur modification protein DndD [Turicibacter sp. HGF1] Length = 666 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K I I +FR F+ +EF+ +LTI++ NG GK++L +A W YG + Sbjct: 1 MKFKSINIINFRQFSGENLLEFSVNDEKNLTIIHAMNGSGKTTLLQAFNWCLYGK-MKLP 59 Query: 83 HGDSIKKRSIKTPMPMCMAVP 103 D I +I + ++P Sbjct: 60 DPDKIINETIFQQLEKQSSLP 80 >gi|308460452|ref|XP_003092530.1| hypothetical protein CRE_25880 [Caenorhabditis remanei] gi|308253106|gb|EFO97058.1| hypothetical protein CRE_25880 [Caenorhabditis remanei] Length = 74 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +EI +F+ + I T + G NG GKS+L +AI +++ R+H Sbjct: 16 LDTLEIENFKSYKGFHLIGPFSRFTAIIGPNGSGKSNLMDAISFVWRETPISRRH 70 >gi|312114249|ref|YP_004011845.1| ATP-dependent endonuclease of the OLD family [Rhodomicrobium vannielii ATCC 17100] gi|311219378|gb|ADP70746.1| putative ATP-dependent endonuclease of the OLD family [Rhodomicrobium vannielii ATCC 17100] Length = 543 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++I +F+ F +++F + I+ G N GKS+L EAI G +G Sbjct: 1 MYIEKVKIKNFKCFEGWFEVDFDQGVNIIVGNNEAGKSTLLEAIHLCLTGM----LNGKY 56 Query: 87 IK 88 ++ Sbjct: 57 LR 58 >gi|219851419|ref|YP_002465851.1| SMC domain protein [Methanosphaerula palustris E1-9c] gi|219545678|gb|ACL16128.1| SMC domain protein [Methanosphaerula palustris E1-9c] Length = 623 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-------YGYTQ 79 L I IS ++ F E +I F+ L ++ G+NG GKSS+ +AI + G ++ Sbjct: 1 MFLEKISISGYKNFNENFEICFSSGLNVLVGENGVGKSSIIDAIRLILSEDEYGRSGISE 60 Query: 80 RRKHGDSIKKR 90 + H +K Sbjct: 61 KDFHRPFVKDS 71 >gi|83317641|ref|XP_731250.1| chromosome assembly protein [Plasmodium yoelii yoelii str. 17XNL] gi|23491225|gb|EAA22815.1| chromosome assembly protein xcap-c [Plasmodium yoelii yoelii] Length = 1463 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 8 NTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSL 66 NT CL+ + R +I + + +F+ ++ I+ I F + + G NG GKS++ Sbjct: 50 NTNLCLNNIIKKNNKRIII---EKLILENFKSYSGIKIIGPFYKKFSCIVGPNGSGKSNI 106 Query: 67 SEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMC 99 +A+ ++F G ++ + + + Sbjct: 107 IDAMLFVF-GRRAKKIRQNKLSDLIHNSKYSTN 138 >gi|149738962|ref|XP_001504048.1| PREDICTED: structural maintenance of chromosomes 2 [Equus caballus] Length = 1191 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIVLEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|302916893|ref|XP_003052257.1| condensin complex component SMC3 [Nectria haematococca mpVI 77-13-4] gi|256733196|gb|EEU46544.1| condensin complex component SMC3 [Nectria haematococca mpVI 77-13-4] Length = 1197 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSSKTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|224826554|ref|ZP_03699655.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gi|224601155|gb|EEG07337.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 874 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLQQLEVGPFRGFMRQETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 132 >gi|224477807|ref|YP_002635413.1| hypothetical protein Sca_2325 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422414|emb|CAL29228.1| hypothetical protein SCA_2325 [Staphylococcus carnosus subsp. carnosus TM300] Length = 392 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 30/50 (60%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++++++FR F +++F D L G N GK+++ +A+E++ G Sbjct: 1 MYISNMKLTNFRSFNGNNELQFNDGLNFFVGNNNCGKTTVFKAVEFIQNG 50 >gi|163784336|ref|ZP_02179239.1| hypothetical protein HG1285_04758 [Hydrogenivirga sp. 128-5-R1-1] gi|159880397|gb|EDP73998.1| hypothetical protein HG1285_04758 [Hydrogenivirga sp. 128-5-R1-1] Length = 666 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I + F+ + + I D + G NG GKS++ ++I + T + Sbjct: 5 YIDRINVYGFKSYGLRKLSIPIGDGFVGIVGPNGSGKSNIGDSIVFALGLATAKSMR 61 >gi|323705375|ref|ZP_08116950.1| SMC domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535277|gb|EGB25053.1| SMC domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 853 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYT-----QRRKHG 84 + + +F ++E + ++F H+ + G+NG GKSSL +AI W +G R Sbjct: 5 RLTLKNFMSYSENEVMDFTRFHIAAITGKNGNGKSSLWDAITWCIWGRARGLDGAGRGSD 64 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQL 109 D I+ + + + + KY++ Sbjct: 65 DLIRIGADEMEVEFIFKINNTKYRI 89 >gi|301094310|ref|XP_002896261.1| structural maintenance of chromosomes protein 4, putative [Phytophthora infestans T30-4] gi|262109656|gb|EEY67708.1| structural maintenance of chromosomes protein 4, putative [Phytophthora infestans T30-4] Length = 1346 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ + +I F + V G NG GKS++ +A+ ++F + Sbjct: 2 ITKMHLENFKSYAGKVEIGPFHKCFSAVVGPNGSGKSNVIDALLFVFGKRASK 54 >gi|226286769|gb|EEH42282.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1199 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|225684681|gb|EEH22965.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 1199 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|119579380|gb|EAW58976.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast), isoform CRA_c [Homo sapiens] Length = 1099 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|114625958|ref|XP_001136821.1| PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 3 [Pan troglodytes] Length = 1099 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|307822263|ref|ZP_07652495.1| conserved hypothetical protein [Methylobacter tundripaludum SV96] gi|307736829|gb|EFO07674.1| conserved hypothetical protein [Methylobacter tundripaludum SV96] Length = 572 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K I I +FR Q+IE +T + G N GK+++ +AIE +F GY + + Sbjct: 1 MKFEAIRIKNFRTIEGEQEIELGHGIT-IVGPNSSGKTNILKAIEMVFTGYENKLDYD 57 >gi|255725234|ref|XP_002547546.1| structural maintenance of chromosome 2 [Candida tropicalis MYA-3404] gi|240135437|gb|EER34991.1| structural maintenance of chromosome 2 [Candida tropicalis MYA-3404] Length = 1171 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYAARTVISGWDSQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|239610513|gb|EEQ87500.1| chromosome segregation protein sudA [Ajellomyces dermatitidis ER-3] gi|327349059|gb|EGE77916.1| chromosome segregation protein sudA [Ajellomyces dermatitidis ATCC 18188] Length = 1199 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|46124223|ref|XP_386665.1| hypothetical protein FG06489.1 [Gibberella zeae PH-1] Length = 1062 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 30 LDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I++F G + I+F LT++ G NG GKS++ EAI W +G R Sbjct: 450 RTLTITNFLGVQHVITIDFRNDFPRGLTLLVGDNGSGKSTIVEAIVWCQFGRCIRSG 506 >gi|311246142|ref|XP_003122098.1| PREDICTED: structural maintenance of chromosomes protein 2-like [Sus scrofa] Length = 570 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|300120555|emb|CBK20109.2| unnamed protein product [Blastocystis hominis] Length = 421 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + HF+ + QK F++ L + G+NG GKS+L +AI G+ +R Sbjct: 4 LEQVSVFHFKSYDNEQKYRFSEKLNCIVGRNGSGKSALIDAIC-CALGFDLKRLR 57 >gi|19074490|ref|NP_585996.1| CUT3-LIKE CHROMOSOME SEGREGATION PROTEIN [Encephalitozoon cuniculi GB-M1] gi|19069132|emb|CAD25600.1| CUT3-LIKE CHROMOSOME SEGREGATION PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 1112 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 22 ARKLIFKL--LDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 AR L KL I I +F+ + I T + G NG GKS++ ++I ++ G+ Sbjct: 3 ARALGMKLGLESITIHNFKSYRGTHVIRGLDPKFTAIVGANGSGKSNIIDSILFVL-GFR 61 Query: 79 QRRKHGDSIKKR--SIKTPMPMC 99 RR S+ S MC Sbjct: 62 ARRMRHSSLADLIYSGDGKEDMC 84 >gi|308460454|ref|XP_003092531.1| CRE-HIM-1 protein [Caenorhabditis remanei] gi|308253107|gb|EFO97059.1| CRE-HIM-1 protein [Caenorhabditis remanei] Length = 1203 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 16 LDTLEIENFKSYKGFHLIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 63 >gi|241713550|ref|XP_002412101.1| SMC protein, putative [Ixodes scapularis] gi|215505178|gb|EEC14672.1| SMC protein, putative [Ixodes scapularis] Length = 1182 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + I F + + G NG GKS++ ++I ++ + Sbjct: 1 MHIKSITIDGFKSYGQRVDINGFDNLFNAITGLNGSGKSNILDSICFVLGITNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|78185894|ref|YP_373937.1| RecF protein [Chlorobium luteolum DSM 273] gi|123730146|sp|Q3B6Y7|RECF_PELLD RecName: Full=DNA replication and repair protein recF gi|78165796|gb|ABB22894.1| RecF protein [Chlorobium luteolum DSM 273] Length = 369 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +I++ +FR + + + +T++ G NG GK+S+ EAI + + Sbjct: 1 MRLKNIQVENFRNHHSLA-FQPEEGITVLYGPNGSGKTSVLEAIHYCALTKS 51 >gi|78043999|ref|YP_361489.1| DNA recombination/replication protein RecF [Carboxydothermus hydrogenoformans Z-2901] gi|123575248|sp|Q3A8P5|RECF_CARHZ RecName: Full=DNA replication and repair protein recF gi|77996114|gb|ABB15013.1| DNA recombination/replication protein RecF [Carboxydothermus hydrogenoformans Z-2901] Length = 353 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E I+F+ ++ G NG GK++L EAI +L G + R K Sbjct: 1 MFVDRLQLLNFRNY-EELLIDFSPGKILIYGANGQGKTNLIEAIYYLVIGKSFRGKDNSL 59 Query: 87 IKK 89 I+ Sbjct: 60 IRF 62 >gi|326202775|ref|ZP_08192642.1| LOW QUALITY PROTEIN: DNA replication and repair protein RecF [Clostridium papyrosolvens DSM 2782] gi|325986852|gb|EGD47681.1| LOW QUALITY PROTEIN: DNA replication and repair protein RecF [Clostridium papyrosolvens DSM 2782] Length = 372 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + ++R T ++ F+D I+ G NG GK+++ EAI G + R + Sbjct: 3 VKSLVLKNYRNHT-NTRLVFSDRFNIIYGDNGQGKTNILEAIYLCASGRSHRTAKDSELI 61 Query: 89 KRSIKT 94 K + Sbjct: 62 KFGCDS 67 >gi|313112549|ref|ZP_07798213.1| putative recombination protein F [Faecalibacterium cf. prausnitzii KLE1255] gi|310625131|gb|EFQ08422.1| putative recombination protein F [Faecalibacterium cf. prausnitzii KLE1255] Length = 373 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E++++R ++E LT++ G NG GK++L EAI L G + R Sbjct: 1 MRLLSLEVANYRNIAA-AQLEPGRELTVICGNNGQGKTNLLEAIWLLTGGKSFRGGKDAE 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LVRRG 64 >gi|290977298|ref|XP_002671375.1| structural maintenance of chromosome 2 [Naegleria gruberi] gi|284084943|gb|EFC38631.1| structural maintenance of chromosome 2 [Naegleria gruberi] Length = 955 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + + F + G NG GKS++ +AI ++ + + Sbjct: 1 MYIKEVYIDGFKSYASRTVLNGFDKSFNAITGLNGSGKSNILDAICFVLGISNLSQVRAN 60 Query: 86 SIKKRSIKT 94 ++ + K Sbjct: 61 NLTELIYKQ 69 >gi|322392439|ref|ZP_08065899.1| recombination protein F [Streptococcus peroris ATCC 700780] gi|321144431|gb|EFX39832.1| recombination protein F [Streptococcus peroris ATCC 700780] Length = 363 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ I FR + + +IEF L + G+N GK++L E+I +L + R K + Sbjct: 1 MWLKNLSIKQFRNYRD-TEIEFNPKLNVFVGRNAQGKTNLLESIYFLALTRSHRTKTDKN 59 Query: 87 IKK 89 + + Sbjct: 60 LIQ 62 >gi|291561641|emb|CBL40440.1| DNA replication and repair protein RecF [butyrate-producing bacterium SS3/4] Length = 361 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+S +R ++ + I+F ++ G N GK+++ EA+ + R Sbjct: 1 MFIESIELSDYRNYSHLH-IDFHKGTNVLYGDNAQGKTNILEAVYVCSTTKSHRGSKDKE 59 Query: 87 IKKRSIKTPMPMCMAVPR 104 I + + M V R Sbjct: 60 IIRFGAD-ESHIKMMVRR 76 >gi|119509397|ref|ZP_01628546.1| DNA repair and genetic recombination protein [Nodularia spumigena CCY9414] gi|119466011|gb|EAW46899.1| DNA repair and genetic recombination protein [Nodularia spumigena CCY9414] Length = 376 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + FR + + QK+EF TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKNLHLRQFRNYQD-QKVEFTAAKTILVGNNAQGKSNLLEAVELLATLRSHRMGRVAD 59 Query: 87 IKKRSIK 93 + Sbjct: 60 FIQEGQD 66 >gi|81300818|ref|YP_401026.1| hypothetical protein Synpcc7942_2009 [Synechococcus elongatus PCC 7942] gi|81169699|gb|ABB58039.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 922 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+ E EF + + G+NG GK+S+ EAI W + + + Sbjct: 1 MEIRSVSLRNFKTHAEAA-FEFRLGVNAICGENGAGKTSILEAIAWTLFDFDS-GYRKEE 58 Query: 87 IKKRS 91 ++++ Sbjct: 59 LRRQG 63 >gi|56752095|ref|YP_172796.1| hypothetical protein syc2086_c [Synechococcus elongatus PCC 6301] gi|56687054|dbj|BAD80276.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 922 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+ E EF + + G+NG GK+S+ EAI W + + + Sbjct: 1 MEIRSVSLRNFKTHAEAA-FEFRLGVNAICGENGAGKTSILEAIAWTLFDFDS-GYRKEE 58 Query: 87 IKKRS 91 ++++ Sbjct: 59 LRRQG 63 >gi|261403240|ref|YP_003247464.1| SMC domain protein [Methanocaldococcus vulcanius M7] gi|261370233|gb|ACX72982.1| SMC domain protein [Methanocaldococcus vulcanius M7] Length = 1001 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++++F+ KI F + + G+NG GKSS+ EA+ + +G K+ + I Sbjct: 3 IKEIKMNNFKSHA-NSKITFDKGIVAIIGENGSGKSSIFEAVFFALFGVDSNFKYENIIS 61 Query: 89 KRSIKTPMPMCMAV 102 K + + V Sbjct: 62 KNRKSVRVELDFEV 75 >gi|239825588|ref|YP_002948212.1| recombination protein F [Geobacillus sp. WCH70] gi|259563662|sp|C5D330|RECF_GEOSW RecName: Full=DNA replication and repair protein recF gi|239805881|gb|ACS22946.1| DNA replication and repair protein RecF [Geobacillus sp. WCH70] Length = 374 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R + E + IEFA+++ I+ G+N GK+++ EAI L + R + Sbjct: 1 MFLTHLSLKNYRNY-ESETIEFANNVNIILGENAQGKTNMMEAIYVLAMAKSHRTTNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|329666209|pdb|3QF7|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair gi|329666210|pdb|3QF7|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair Length = 365 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 + + + +F G + IEF +T+V G NG GKSSL EAI + +G R + D Sbjct: 1 MRPERLTVRNFLGL-KNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYD 59 Query: 86 SIKKRSIK 93 + + ++ Sbjct: 60 YVNRNAVD 67 >gi|296190449|ref|XP_002743201.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 1 [Callithrix jacchus] gi|296190451|ref|XP_002743202.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 2 [Callithrix jacchus] gi|296190453|ref|XP_002743203.1| PREDICTED: structural maintenance of chromosomes protein 2 isoform 3 [Callithrix jacchus] Length = 1197 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIVLEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|261195444|ref|XP_002624126.1| chromosome segregation protein sudA [Ajellomyces dermatitidis SLH14081] gi|239587998|gb|EEQ70641.1| chromosome segregation protein sudA [Ajellomyces dermatitidis SLH14081] Length = 1199 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|123444611|ref|XP_001311074.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892870|gb|EAX98144.1| hypothetical protein TVAG_332540 [Trichomonas vaginalis G3] Length = 755 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Query: 28 KLLDIEISHFRGFT------EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KLL + + R F Q I+ D +T++ G NG GK+++ EAI++ G +Q Sbjct: 3 KLLSLTVKGIRLFNPDPKDESTQTIDLDDKMTLITGPNGSGKTTIFEAIQYALIGVSQEN 62 Query: 82 KHG 84 G Sbjct: 63 SGG 65 >gi|116283838|gb|AAH32705.1| SMC2 protein [Homo sapiens] Length = 781 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|9954932|pdb|1F2T|A Chain A, Crystal Structure Of Atp-Free Rad50 Abc-Atpase gi|9954934|pdb|1F2U|A Chain A, Crystal Structure Of Rad50 Abc-Atpase gi|9954936|pdb|1F2U|C Chain C, Crystal Structure Of Rad50 Abc-Atpase Length = 149 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|298704768|emb|CBJ28364.1| SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) [Ectocarpus siliculosus] Length = 1544 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + ++ F + G NG GKS++ +AI ++ + Sbjct: 1 MHIREVVIDGFKSYATRTVLQGFDQQFNAITGLNGSGKSNILDAICFVLGISNLSQVRVS 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|170289653|ref|YP_001736469.1| DNA repair ATPase SbcC [Candidatus Korarchaeum cryptofilum OPF8] gi|170173733|gb|ACB06786.1| ATPase involved in DNA repair, SbcC [Candidatus Korarchaeum cryptofilum OPF8] Length = 902 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ I + +F + I FAD + + G NG GK+++ EAI + Y R+ Sbjct: 1 MRIKRISLENFGSH-QKTDITFADGINAIIGNNGAGKTTILEAIAYALYHRASRQ 54 >gi|170574958|ref|XP_001893036.1| SMC family, C-terminal domain containing protein [Brugia malayi] gi|158601141|gb|EDP38130.1| SMC family, C-terminal domain containing protein [Brugia malayi] Length = 1704 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I++ +F+ + + F + + + G NG GKS++ +++ ++F GY + I Sbjct: 80 ITSIDVENFKSYYGKHVLGPFHQNFSAIIGPNGSGKSNVIDSLLFVF-GYRASKIRSKKI 138 >gi|47940530|gb|AAH71750.1| SMC2 protein [Homo sapiens] Length = 356 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|268532164|ref|XP_002631210.1| C. briggsae CBR-MIX-1 protein [Caenorhabditis briggsae] gi|187036949|emb|CAP23615.1| CBR-MIX-1 protein [Caenorhabditis briggsae AF16] Length = 1296 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I++ F+ + + +I F+ + G NG GKS++ ++I +L Sbjct: 1 MHIKSIQLDGFKSYQKHTEIAPFSPQFNAITGYNGSGKSNVLDSICFLLGISKLDNIRAK 60 Query: 86 SI 87 S+ Sbjct: 61 SM 62 >gi|163782595|ref|ZP_02177592.1| citrate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882168|gb|EDP75675.1| citrate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 1158 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + F+ + E+++I + G NG GKS++ +A+ + T + ++ Sbjct: 5 VEKIVVEGFKSYGRELKEIPIGSGFVAIVGPNGAGKSNIGDALSFALGIATTKTLRAKNL 64 >gi|67969264|dbj|BAE00985.1| unnamed protein product [Macaca fascicularis] Length = 939 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|39655001|pdb|1US8|A Chain A, The Rad50 Signature Motif: Essential To Atp Binding And Biological Function Length = 147 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|122890021|emb|CAM14005.1| structural maintenance of chromosomes 2 [Mus musculus] Length = 471 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|322386450|ref|ZP_08060079.1| recombination protein F [Streptococcus cristatus ATCC 51100] gi|321269536|gb|EFX52467.1| recombination protein F [Streptococcus cristatus ATCC 51100] Length = 371 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I HFR + + ++F L I GQN GK+++ EAI +L + R + Sbjct: 1 MWLKTLKIKHFRNYQAAE-VDFDPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRTDKD 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIHFQEK 66 >gi|266620981|ref|ZP_06113916.1| DNA replication and repair protein RecF [Clostridium hathewayi DSM 13479] gi|288867362|gb|EFC99660.1| DNA replication and repair protein RecF [Clostridium hathewayi DSM 13479] Length = 361 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R + + ++F+ I+ G N GK+++ EAI + R I Sbjct: 3 IESIELKNYRNY-DKLHMDFSHGTNILYGDNAQGKTNILEAIYVCATTKSHRGSKDKEII 61 Query: 89 K 89 + Sbjct: 62 Q 62 >gi|124481768|gb|AAI33261.1| Unknown (protein for IMAGE:6927834) [Xenopus laevis] Length = 466 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + +I F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIIIDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|50293773|ref|XP_449298.1| hypothetical protein [Candida glabrata CBS 138] gi|49528611|emb|CAG62272.1| unnamed protein product [Candida glabrata] Length = 1398 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Query: 7 KNTCACLSKSLTSYYARKLIFK-----LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNG 60 KN+ A L K Y ++KL K + + ++ F+ + Q I F + + G NG Sbjct: 106 KNSRAELQKL---YESKKLDVKKERLFIHQLVLNDFKSYAGRQVIGPFHTSFSAIVGPNG 162 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 GKS++ +++ ++F G+ + D + K+ Sbjct: 163 SGKSNVIDSMLFVF-GFRANKMRQDRLSDLIHKSE 196 >gi|30173243|sp|Q8CG48|SMC2_MOUSE RecName: Full=Structural maintenance of chromosomes protein 2; Short=SMC protein 2; Short=SMC-2; AltName: Full=Chromosome-associated protein E; AltName: Full=FGF-inducible protein 16; AltName: Full=XCAP-E homolog gi|26986198|emb|CAD59182.1| SMC2 protein [Mus musculus] Length = 1191 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 + + K Sbjct: 61 NFQDLVYK 68 >gi|226823349|ref|NP_001152812.1| structural maintenance of chromosomes 1A [Nasonia vitripennis] Length = 1227 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I T V G NG GKS+ +AI ++ T Sbjct: 5 LKHIEVDNFKSYKGRLTIGPLKSFTAVIGPNGSGKSNFMDAISFVMGEKT 54 >gi|168019040|ref|XP_001762053.1| condensin complex component SMC2 [Physcomitrella patens subsp. patens] gi|162686770|gb|EDQ73157.1| condensin complex component SMC2 [Physcomitrella patens subsp. patens] Length = 1208 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ ++ Sbjct: 1 MYIKEICLEGFKSYATRTTVTNFDPVFNAITGYNGSGKSNILDSICFVMGITNLQQVRVA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|119491644|ref|ZP_01623516.1| recombination protein F [Lyngbya sp. PCC 8106] gi|119453373|gb|EAW34537.1| recombination protein F [Lyngbya sp. PCC 8106] Length = 390 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + QK+ F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLKQFRNYRD-QKVAFDAPKTILVGDNAQGKSNLLEAVELLSTLKSHRVSRDRE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LILDTQD 66 >gi|84489889|ref|YP_448121.1| DNA double-strand break repair protein Rad50 [Methanosphaera stadtmanae DSM 3091] gi|84373208|gb|ABC57478.1| DNA double-strand break repair protein Rad50 [Methanosphaera stadtmanae DSM 3091] Length = 902 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 4/75 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +IE+++F+ KIEF ++++ G+NG GKSS+ EAI + F+ + + K Sbjct: 3 INNIELTNFKSHKS-TKIEFKKGISLILGENGAGKSSILEAISYAFFKQVNGKLEENIRK 61 Query: 89 KRSIK---TPMPMCM 100 ++ K M +C+ Sbjct: 62 PQNRKDIVDKMEVCV 76 >gi|320326173|gb|EFW82228.1| hypothetical protein PsgB076_02805 [Pseudomonas syringae pv. glycinea str. B076] Length = 874 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L +E+ FRGF + + + +T+V G NG GKSS EA+E G Sbjct: 82 RLYQLEVGPFRGFMRPETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSI 132 >gi|291567025|dbj|BAI89297.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 1026 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I+ Sbjct: 5 KLTLKNFLSYRD-ASLDFSGLHTACICGPNGAGKSSLLEAIAWSIWGQSRAGTEDDLIQ 62 >gi|55821982|ref|YP_140424.1| recombination protein F [Streptococcus thermophilus LMG 18311] gi|81676637|sp|Q5M237|RECF_STRT2 RecName: Full=DNA replication and repair protein recF gi|55737967|gb|AAV61609.1| DNA repair and genetic recombination protein [Streptococcus thermophilus LMG 18311] Length = 366 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R Sbjct: 1 MWLEKIDIQHFRNYSE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIQFQQNS 67 >gi|55823899|ref|YP_142340.1| recombination protein F [Streptococcus thermophilus CNRZ1066] gi|116628673|ref|YP_821292.1| recombination protein F [Streptococcus thermophilus LMD-9] gi|81676484|sp|Q5LXI7|RECF_STRT1 RecName: Full=DNA replication and repair protein recF gi|122266733|sp|Q03I76|RECF_STRTD RecName: Full=DNA replication and repair protein recF gi|55739884|gb|AAV63525.1| DNA repair and genetic recombination protein [Streptococcus thermophilus CNRZ1066] gi|116101950|gb|ABJ67096.1| Recombinational DNA repair ATPase (RecF pathway) [Streptococcus thermophilus LMD-9] gi|312279328|gb|ADQ63985.1| DNA replication and repair protein recF [Streptococcus thermophilus ND03] Length = 366 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I HFR ++E + F+ HL I G+N GK+++ EAI +L + R Sbjct: 1 MWLEKIDIQHFRNYSE-ASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIQFQQNS 67 >gi|312871309|ref|ZP_07731407.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 3008A-a] gi|311093323|gb|EFQ51669.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 3008A-a] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|169600791|ref|XP_001793818.1| hypothetical protein SNOG_03248 [Phaeosphaeria nodorum SN15] gi|111068859|gb|EAT89979.1| hypothetical protein SNOG_03248 [Phaeosphaeria nodorum SN15] Length = 1217 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I F+ + + ++E F+ +V G+NG GKS+ A+ ++ Sbjct: 3 YIKQITIQGFKSYKDQTQMEPFSPKCNVVVGRNGSGKSNFFAAVRFVLG 51 >gi|110667658|ref|YP_657469.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] gi|109625405|emb|CAJ51829.1| DNA double-strand break repair rad50 ATPase [Haloquadratum walsbyi DSM 16790] Length = 898 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + HF+ + + ++ D +TI++G NG GKSSL EA + YG Sbjct: 1 MRFDHITLEHFKPYAD-ASLDLQDGVTIIHGLNGSGKSSLLEACFFALYG 49 >gi|284052082|ref|ZP_06382292.1| SMC domain-containing protein [Arthrospira platensis str. Paraca] gi|78773867|gb|ABB51217.1| ATP-binding protein [Arthrospira platensis] Length = 402 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR------ 80 ++ +++S+FRGF E + EF + ++ G NG GKSS+ +A+ F + Sbjct: 1 MQINQLKLSNFRGF-EQAEFEFQPGMNLIVGINGVGKSSVLDALRIAFSRILPKLTACQE 59 Query: 81 ---RKHGDSIKKRSIKTPMPMCMAVP----RCKY 107 + D I K + M + + RCK+ Sbjct: 60 RKINFNTDDIMIGKDKLMIEMNVDISGIPFRCKF 93 >gi|20094127|ref|NP_613974.1| SMC1-family ATPase [Methanopyrus kandleri AV19] gi|49036452|sp|Q8TXI4|RAD50_METKA RecName: Full=DNA double-strand break repair rad50 ATPase gi|19887131|gb|AAM01904.1| SMC1-family ATPase involved in DNA repair [Methanopyrus kandleri AV19] Length = 876 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++I + R + +IEF + + ++ G NG GK+++ EAI + T R D + Sbjct: 2 IERVKIENLRSHSS-TEIEFREGINVLVGPNGAGKTTVLEAITLALFPRTFRSY--DHMI 58 Query: 89 KRSIK 93 + + Sbjct: 59 REGER 63 >gi|16800824|ref|NP_471092.1| hypothetical protein lin1756 [Listeria innocua Clip11262] gi|16414243|emb|CAC96987.1| lin1756 [Listeria innocua Clip11262] Length = 660 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL +++ +F+G E++ I+F D+ T + G N GK+++ +A WL + K + Sbjct: 18 IKLLKLQLENFKGIKELE-IDFQDN-TSIYGANASGKTTILDAFTWLLFDKDSTNKKDFA 75 Query: 87 IKKRSIKTP 95 IK ++ Sbjct: 76 IKTLDMEGK 84 >gi|309804122|ref|ZP_07698203.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 11V1-d] gi|309809779|ref|ZP_07703633.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 2503V10-D] gi|308163890|gb|EFO66156.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 11V1-d] gi|308169958|gb|EFO71997.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 2503V10-D] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|315654134|ref|ZP_07907050.1| recombination protein F [Lactobacillus iners ATCC 55195] gi|315488830|gb|EFU78476.1| recombination protein F [Lactobacillus iners ATCC 55195] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|312872636|ref|ZP_07732701.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2062A-h1] gi|311091678|gb|EFQ50057.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2062A-h1] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|301614517|ref|XP_002936738.1| PREDICTED: structural maintenance of chromosomes protein 2-like [Xenopus (Silurana) tropicalis] Length = 1119 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + +I F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIIIDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|284051594|ref|ZP_06381804.1| exonuclease SbcC [Arthrospira platensis str. Paraca] Length = 631 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I+ Sbjct: 5 KLTLKNFLSYRD-ASLDFSGLHTACICGPNGAGKSSLLEAIAWSIWGQSRAGTEDDLIQ 62 >gi|171186263|ref|YP_001795182.1| SMC domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935475|gb|ACB40736.1| SMC domain protein [Thermoproteus neutrophilus V24Sta] Length = 702 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---- 84 + IE+ +F+ + + + + G NG GK+SL EA+ +G R+ G Sbjct: 2 IRRIELYNFKAHA-KAVFKLGEGVNFIYGPNGSGKTSLMEAVAVALFGSQWVRRTGGRWA 60 Query: 85 DSIKKRSIKTPMPMCMA 101 D +++ + + + ++ Sbjct: 61 DYLRRGAAAGEVKLHLS 77 >gi|164657536|ref|XP_001729894.1| hypothetical protein MGL_2880 [Malassezia globosa CBS 7966] gi|159103788|gb|EDP42680.1| hypothetical protein MGL_2880 [Malassezia globosa CBS 7966] Length = 1358 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + F+ + Q+I F + + G NG GKS++ +A+ ++F + + G Sbjct: 53 IHKLVLQDFKSYAGRQEIGPFHKSFSSIVGPNGSGKSNVIDALLFVFGWRANKMRQG 109 >gi|332029385|gb|EGI69340.1| Structural maintenance of chromosomes protein 1A [Acromyrmex echinatior] Length = 1228 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I T V G NG GKS+ +AI ++ T Sbjct: 5 LKHIEVDNFKSYKGKLIIGPLKSFTAVVGPNGSGKSNFMDAISFVMGEKT 54 >gi|312873299|ref|ZP_07733354.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2052A-d] gi|311091179|gb|EFQ49568.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2052A-d] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|259500774|ref|ZP_05743676.1| recombination protein F [Lactobacillus iners DSM 13335] gi|302190775|ref|ZP_07267029.1| recombination protein F [Lactobacillus iners AB-1] gi|312874858|ref|ZP_07734877.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2053A-b] gi|325913713|ref|ZP_08176075.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 60-B] gi|329919805|ref|ZP_08276756.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 1401G] gi|259167468|gb|EEW51963.1| recombination protein F [Lactobacillus iners DSM 13335] gi|311089603|gb|EFQ48028.1| DNA replication and repair protein RecF [Lactobacillus iners LEAF 2053A-b] gi|325477072|gb|EGC80222.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 60-B] gi|328937152|gb|EGG33580.1| DNA replication and repair protein RecF [Lactobacillus iners SPIN 1401G] Length = 373 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|255539797|ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis] gi|223550078|gb|EEF51565.1| Structural maintenance of chromosome, putative [Ricinus communis] Length = 1176 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I+ F + G NG GKS++ ++I ++ ++ Sbjct: 1 MHIKEICLEGFKSYATRTVIQGFDPFFNAITGLNGSGKSNVLDSICFVLGITNLQQVRAA 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|224009910|ref|XP_002293913.1| chromosome condensation protein-like protein [Thalassiosira pseudonana CCMP1335] gi|220970585|gb|EED88922.1| chromosome condensation protein-like protein [Thalassiosira pseudonana CCMP1335] Length = 1268 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +E+ +F+ + +++I F + V G NG GKS++ +A+ ++F G ++ Sbjct: 2 ITKMELENFKSYAGLKQIGPFHKCFSSVVGPNGSGKSNVIDAMLFVF-GKRAKKLR 56 >gi|309774993|ref|ZP_07670009.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 3_1_53] gi|308917247|gb|EFP62971.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 3_1_53] Length = 366 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR + +I + F+D + I+ G+N GK++L E+I +L + R Sbjct: 1 MRLETLRLHDFRNYADIN-VSFSDGIHILTGKNAQGKTNLLESILYLSTTRSHRTSEDKD 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 LIKEGEE 66 >gi|300854642|ref|YP_003779626.1| hypothetical protein CLJU_c14560 [Clostridium ljungdahlii DSM 13528] gi|300434757|gb|ADK14524.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528] Length = 719 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +FR + + F ++ ++ G+NG GKS+L EAI+ YG Sbjct: 3 INSITLKNFRSYEDETTFTFTPKDNKNIVLIGGENGAGKSTLFEAIKLCIYG 54 >gi|261493354|ref|ZP_05989880.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496620|ref|ZP_05993000.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307823|gb|EEY09146.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310998|gb|EEY12175.1| DNA recombination protein RecF [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 372 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 T + R L L + I+HFR + + F+ H + G NG GK+SL E+I +L +G Sbjct: 3 TLFIPRTLTMALTRLLINHFRNI-QHTDLAFSPHFNFLVGANGSGKTSLLESIFYLGHGR 61 Query: 78 TQRR 81 + + Sbjct: 62 SFKS 65 >gi|294655464|ref|XP_002770131.1| DEHA2B15136p [Debaryomyces hansenii CBS767] gi|199429980|emb|CAR65500.1| DEHA2B15136p [Debaryomyces hansenii] Length = 1170 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISGWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|145592571|ref|YP_001156868.1| recombination protein F [Salinispora tropica CNB-440] gi|189039640|sp|A4X0U0|RECF_SALTO RecName: Full=DNA replication and repair protein recF gi|145301908|gb|ABP52490.1| DNA replication and repair protein RecF [Salinispora tropica CNB-440] Length = 377 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ ++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGANVLVGPNGVGKTNLIEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + C V Sbjct: 60 LVRMGAAAGIIRCAVV 75 >gi|50542914|ref|XP_499623.1| YALI0A00616p [Yarrowia lipolytica] gi|49645488|emb|CAG83543.1| YALI0A00616p [Yarrowia lipolytica] Length = 1189 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +I+ F+ +V G+NG GKS+ A+ ++ Sbjct: 1 MYIKQIRIQGFKSYKNLVEIDPFSPRFNVVVGRNGSGKSNFFAAVRFVL 49 >gi|159186464|ref|NP_395960.2| hypothetical protein Atu5023 [Agrobacterium tumefaciens str. C58] gi|159141524|gb|AAK90401.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 577 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++I +FR F+E I+F L ++ G N GKS++ +A+ L G Sbjct: 1 MHLASLKIKNFRRFSE-TTIKFKSGLNVIVGPNNIGKSAVVDALRSLLAG 49 >gi|301779748|ref|XP_002925291.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-like [Ailuropoda melanoleuca] Length = 1259 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|188588958|ref|YP_001921306.1| DNA sulfur modification protein DndD [Clostridium botulinum E3 str. Alaska E43] gi|188499239|gb|ACD52375.1| DNA sulfur modification protein DndD [Clostridium botulinum E3 str. Alaska E43] Length = 719 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +FR + + F ++ +V G+NG GKS+L EAI+ YG Sbjct: 3 INSITLKNFRSYEDKTTFSFTPKGNKNIVLVGGENGAGKSTLFEAIKLCIYG 54 >gi|70953033|ref|XP_745644.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526032|emb|CAH82054.1| hypothetical protein PC000153.05.0 [Plasmodium chabaudi chabaudi] Length = 306 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 43/97 (44%), Gaps = 5/97 (5%) Query: 4 LRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYG 62 + NT CL+ + R +I + + +F+ ++ ++ I F + + G NG G Sbjct: 45 IENNNTELCLNNIVKKNNKRIII---EKLILENFKSYSGVKIIGPFYKKFSCIVGPNGSG 101 Query: 63 KSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMC 99 KS++ +A+ ++F G ++ + + + Sbjct: 102 KSNIIDAMLFVF-GRRAKKIRQNKLSDLIHNSKYSTN 137 >gi|147898636|ref|NP_001081372.1| structural maintenance of chromosomes protein 2 [Xenopus laevis] gi|1722856|sp|P50533|SMC2_XENLA RecName: Full=Structural maintenance of chromosomes protein 2; Short=SMC protein 2; Short=SMC-2; AltName: Full=Chromosome assembly protein XCAP-E; AltName: Full=Chromosome-associated protein E gi|563814|gb|AAA64680.1| XCAP-E [Xenopus laevis] Length = 1203 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + +I F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIIIDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|332363649|gb|EGJ41429.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Streptococcus sanguinis SK49] Length = 601 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L I+I +FRG+ + ++F D+LT G+N GKS++ EA+E Sbjct: 1 MRLKQIKIKNFRGYKDETIVDF-DNLTAFIGKNDAGKSTILEALE 44 >gi|110597462|ref|ZP_01385749.1| SMC protein-like [Chlorobium ferrooxidans DSM 13031] gi|110341006|gb|EAT59477.1| SMC protein-like [Chlorobium ferrooxidans DSM 13031] Length = 813 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I ++ + + ++ F+ + +++G NG GKS++ EAI + +G R + Sbjct: 1 MQILSIHLTDIKSHRD-TELSFSSGINVLSGANGSGKSTVFEAIGYALFGVDARDFVSNV 59 Query: 87 IKKRSIKTPM 96 + SI + Sbjct: 60 DRFISIGSKR 69 >gi|71002120|ref|XP_755741.1| chromosome segregation protein SudA [Aspergillus fumigatus Af293] gi|66853379|gb|EAL93703.1| chromosome segregation protein SudA, putative [Aspergillus fumigatus Af293] gi|159129796|gb|EDP54910.1| chromosome segregation protein SudA, putative [Aspergillus fumigatus A1163] Length = 1199 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|317026832|ref|XP_001399622.2| chromosome segregation protein sudA [Aspergillus niger CBS 513.88] Length = 1198 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|291563433|emb|CBL42249.1| ATPase involved in DNA repair [butyrate-producing bacterium SS3/4] Length = 943 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + IS F + I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MKPKKLVISAFGPYAGESTIDFEKLGEHGLYLITGDTGAGKTTVFDAITFALYGEASGTV 60 Query: 83 HGDSIKKRSI-----KTPMPMCMAVPRCKYQLK 110 + + +T + + + R +Y+++ Sbjct: 61 RESGMFRSKYAKAETETFVELTFSYQRKEYKIR 93 >gi|209525347|ref|ZP_03273888.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209494198|gb|EDZ94512.1| conserved hypothetical protein [Arthrospira maxima CS-328] Length = 688 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL I++ +FR F I + + T++ G NG GK+++ A W+ Y Sbjct: 1 MNLLSIQLCNFRQFYGKSPIIYLAKGEQNTTVIYGNNGAGKTTILNAFSWVLYE 54 >gi|297478203|ref|XP_002689921.1| PREDICTED: structural maintenance of chromosomes 2 [Bos taurus] gi|296484411|gb|DAA26526.1| structural maintenance of chromosomes 2 [Bos taurus] Length = 1191 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSVILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|38232645|ref|NP_938412.1| recombination protein F [Corynebacterium diphtheriae NCTC 13129] gi|51316242|sp|Q6NKL5|RECF_CORDI RecName: Full=DNA replication and repair protein recF gi|38198903|emb|CAE48514.1| DNA replication and repair protein [Corynebacterium diphtheriae] Length = 397 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + E + +T+ G+NG+GK+++ EAI ++ + + R H + Sbjct: 1 MYIRELSLRDFRSWPECT-VTLEPGVTLFVGRNGFGKTNIVEAIGYVAHLGSHRVFHDSA 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ ++ AV Sbjct: 60 LVRQGKESARVSVTAV 75 >gi|260891933|ref|YP_003238030.1| DNA replication and repair protein RecF [Ammonifex degensii KC4] gi|260864074|gb|ACX51180.1| DNA replication and repair protein RecF [Ammonifex degensii KC4] Length = 358 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR + E++ E + + ++ G N GK++L EA+ ++ G + R + Sbjct: 1 MWIRSLFLRNFRNYCELE-WEPSSGINLLKGPNAAGKTNLLEALYFVLCGRSFRTLREEE 59 Query: 87 IKKRSIKT 94 I + T Sbjct: 60 IVRTGETT 67 >gi|56710334|ref|NP_989847.1| SMC1 protein cohesin subunit [Gallus gallus] gi|29837126|emb|CAD58850.2| SMC1 protein cohesin subunit [Gallus gallus] Length = 1234 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + Q I T + NG GKS+L +AI ++ T Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFRRFTAIIVPNGSGKSNLMDAISFVLGEKT 53 >gi|307207691|gb|EFN85328.1| Structural maintenance of chromosomes protein 2 [Harpegnathos saltator] Length = 1177 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +I F + G NG GKS++ +AI ++ + Sbjct: 1 MYIKSMVLEGFKSYGKRIEINGFDKEFNAITGFNGSGKSNILDAICFVLGITNLGQVRAT 60 Query: 86 SIKKRSIKT 94 S++ K+ Sbjct: 61 SLQDLVYKS 69 >gi|239830849|ref|ZP_04679178.1| DNA replication and repair protein RecF [Ochrobactrum intermedium LMG 3301] gi|239823116|gb|EEQ94684.1| DNA replication and repair protein RecF [Ochrobactrum intermedium LMG 3301] Length = 384 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EA+ +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAVSFLSPGRGLRRAAYDD 72 Query: 87 IKKRSI 92 + + S Sbjct: 73 VARTSS 78 >gi|134056537|emb|CAK47661.1| unnamed protein product [Aspergillus niger] Length = 1219 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|323141150|ref|ZP_08076052.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067] gi|322414374|gb|EFY05191.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067] Length = 817 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + I+F+ L ++ G G GK+ + +A+ + YG T Sbjct: 1 MRPLKLIMSAFGPYAGQTVIDFSQLGEQGLYLITGDTGAGKTVIFDAVSYALYGQTSGGV 60 Query: 83 HGDSIKKRSI 92 ++ + Sbjct: 61 RDANMLRSQY 70 >gi|303389909|ref|XP_003073186.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] gi|303302331|gb|ADM11826.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] Length = 1146 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L I I +F+ + I+ T V G NG GKS++ ++I ++ G+ RR Sbjct: 44 LRLESITIHNFKSYKGTHVIQGLDPRFTAVVGANGSGKSNIIDSILFVL-GFRARRMRHS 102 Query: 86 SI 87 S+ Sbjct: 103 SM 104 >gi|119481677|ref|XP_001260867.1| chromosome segregation protein SudA, putative [Neosartorya fischeri NRRL 181] gi|119409021|gb|EAW18970.1| chromosome segregation protein SudA, putative [Neosartorya fischeri NRRL 181] Length = 1199 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|256846511|ref|ZP_05551968.1| ABC transporter ATP-binding protein [Fusobacterium sp. 3_1_36A2] gi|256718280|gb|EEU31836.1| ABC transporter ATP-binding protein [Fusobacterium sp. 3_1_36A2] Length = 671 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 9/71 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYT--- 78 +L I++ +FR F ++ K+ F + ++T++ G NG GK++L+ A W YG Sbjct: 1 MQLKSIKLINFRQFKDL-KVSFENSNVGRNVTLIFGDNGSGKTTLANAFIWCLYGQNDFE 59 Query: 79 QRRKHGDSIKK 89 ++ + +K+ Sbjct: 60 KKELYNIHMKQ 70 >gi|1103893|gb|AAB42143.1| chromosome scaffold protein [Emericella nidulans] Length = 1211 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|238054328|sp|Q00737|SUDA_EMENI RecName: Full=Chromosome segregation protein sudA; AltName: Full=DA-box protein sudA Length = 1215 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|159487461|ref|XP_001701741.1| structural maintenance of chromosomes protein 2 [Chlamydomonas reinhardtii] gi|158280960|gb|EDP06716.1| structural maintenance of chromosomes protein 2 [Chlamydomonas reinhardtii] Length = 1165 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++I F+ + + F + G NG GKS++ ++I ++ + Sbjct: 1 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 60 Query: 86 SIKKRSIKT 94 ++++ K Sbjct: 61 NLQELVYKQ 69 >gi|121716270|ref|XP_001275744.1| chromosome segregation protein SudA, putative [Aspergillus clavatus NRRL 1] gi|119403901|gb|EAW14318.1| chromosome segregation protein SudA, putative [Aspergillus clavatus NRRL 1] Length = 1199 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|46201456|ref|ZP_00055027.2| COG1196: Chromosome segregation ATPases [Magnetospirillum magnetotacticum MS-1] Length = 301 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ + G NG GKS+L EA+ W+ + R+ G + Sbjct: 161 VSALVGPNGCGKSNLIEALRWVMGETSARQMRGGEMDD 198 >gi|167748046|ref|ZP_02420173.1| hypothetical protein ANACAC_02784 [Anaerostipes caccae DSM 14662] gi|167652526|gb|EDR96655.1| hypothetical protein ANACAC_02784 [Anaerostipes caccae DSM 14662] Length = 361 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ ++R + + IEF+ I+ G N GK+++ EA+ + R Sbjct: 1 MYIQSLELKNYRNY-DRLIIEFSSGTNILYGDNAQGKTNILEAVYLGATTKSHRGSKDKE 59 Query: 87 IKKRS 91 I + Sbjct: 60 IIRFG 64 >gi|72019658|ref|XP_790892.1| PREDICTED: similar to XCAP-E [Strongylocentrotus purpuratus] gi|115939351|ref|XP_001184142.1| PREDICTED: similar to XCAP-E [Strongylocentrotus purpuratus] Length = 404 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + +I+ F + G NG GKS++ ++I +L + Sbjct: 1 MYIKEIIVDGFKSYAQRTEIKGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAG 60 Query: 86 SIKKRSIK 93 S+++ K Sbjct: 61 SLQELVYK 68 >gi|67624445|ref|XP_668505.1| stable maintenance of chromosomes; Smc4p [Cryptosporidium hominis TU502] gi|54659708|gb|EAL38274.1| stable maintenance of chromosomes; Smc4p [Cryptosporidium hominis] Length = 1316 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + + I F T + G NG GKS++ +A+ ++F Sbjct: 23 IHKIVLENFKSYGGSKVIGPFHKSFTAIVGPNGSGKSNVIDAMLFVFG 70 >gi|66362792|ref|XP_628362.1| SMC4'SMC4, chromosomal ATpase with giant coiled coil regions' [Cryptosporidium parvum Iowa II] gi|46229789|gb|EAK90607.1| SMC4'SMC4, chromosomal ATpase with giant coiled coil regions' [Cryptosporidium parvum Iowa II] Length = 1366 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + + I F T + G NG GKS++ +A+ ++F Sbjct: 72 IHKIVLENFKSYGGSKVIGPFHKSFTAIVGPNGSGKSNVIDAMLFVFG 119 >gi|330466550|ref|YP_004404293.1| SMC domain-containing protein [Verrucosispora maris AB-18-032] gi|328809521|gb|AEB43693.1| SMC domain-containing protein [Verrucosispora maris AB-18-032] Length = 824 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F + I+F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDLAGFTVFRDETTIDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|324501246|gb|ADY40556.1| Structural maintenance of chromosomes protein 3 [Ascaris suum] Length = 1203 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ I+ FR + E +F+ +V G+NG GKS+ AI+++ Sbjct: 1 MYIKEVSITGFRSYLETTVDDFSPRHNVVVGRNGSGKSNFFLAIQFVL 48 >gi|27227803|emb|CAD59410.1| SMC2 protein [Oryza sativa] Length = 1175 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ R+ Sbjct: 1 MHIKEICLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|332008312|gb|AED95695.1| structural maintenance of chromosomes protein 4 [Arabidopsis thaliana] Length = 1244 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 24 LYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 80 >gi|312069447|ref|XP_003137686.1| hypothetical protein LOAG_02100 [Loa loa] gi|307767146|gb|EFO26380.1| hypothetical protein LOAG_02100 [Loa loa] Length = 970 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I++ +F+ + + F + + + G NG GKS++ +++ ++F GY + I Sbjct: 80 ITSIDVENFKSYYGKHVLGPFHQNFSAIIGPNGSGKSNVIDSLLFVF-GYRASKIRSKKI 138 >gi|281343296|gb|EFB18880.1| hypothetical protein PANDA_014755 [Ailuropoda melanoleuca] Length = 1197 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|223993035|ref|XP_002286201.1| chromosomal protein,like chromosomal protein xcap-e [Thalassiosira pseudonana CCMP1335] gi|220977516|gb|EED95842.1| chromosomal protein,like chromosomal protein xcap-e [Thalassiosira pseudonana CCMP1335] Length = 1217 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F H + G NG GKS++ ++I ++ + Sbjct: 1 MHIKEIVVDGFKSYAHRTVIAGFDPHFNAITGLNGSGKSNILDSICFVLGITNLSQVRAG 60 Query: 86 SIKKRSIKT 94 ++ + K Sbjct: 61 NLSELVYKQ 69 >gi|255933239|ref|XP_002558090.1| Pc12g12820 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582709|emb|CAP80909.1| Pc12g12820 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1199 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|67540388|ref|XP_663968.1| hypothetical protein AN6364.2 [Aspergillus nidulans FGSC A4] gi|40739558|gb|EAA58748.1| hypothetical protein AN6364.2 [Aspergillus nidulans FGSC A4] gi|259479417|tpe|CBF69619.1| TPA: Chromosome segregation protein sudA (DA-box protein sudA) [Source:UniProtKB/Swiss-Prot;Acc:Q00737] [Aspergillus nidulans FGSC A4] Length = 1215 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|67920323|ref|ZP_00513843.1| unknown protein [Crocosphaera watsonii WH 8501] gi|67857807|gb|EAM53046.1| unknown protein [Crocosphaera watsonii WH 8501] Length = 700 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I++ +FR F F + T+++G NG GK++L A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGTTPEIFLASDGKNTTMIHGNNGSGKTTLLNAFTWVLYE 54 >gi|322698449|gb|EFY90219.1| chromosome segregation protein SudA, putative [Metarhizium acridum CQMa 102] Length = 1202 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ A+ ++ Sbjct: 1 MYIKQIIIQGFKSYKEQTVIEPFSPKTNVIVGRNGSGKSNFFAAMRFVL 49 >gi|315231626|ref|YP_004072062.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP] gi|315184654|gb|ADT84839.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP] Length = 865 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + +F + KI+F +T+ G NG GK+S+ +AI + R D I R + Sbjct: 1 MKNFLSHKD-TKIDFPLGVTVFIGPNGAGKTSIIDAIFVALFNTLPRGDKFDDIIYRGER 59 Query: 94 TPM 96 Sbjct: 60 EAK 62 >gi|291230578|ref|XP_002735243.1| PREDICTED: structural maintenance of chromosomes 1A-like [Saccoglossus kowalevskii] Length = 1251 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +E+ +F+ + Q I T + G NG GKS+L +AI ++ Sbjct: 4 LKLLEVENFKSYKGRQIIGPFKPFTAIIGPNGAGKSNLMDAISFVLG 50 >gi|221118117|ref|XP_002164499.1| PREDICTED: similar to structural maintenance of chromosomes 2-like 1 [Hydra magnipapillata] Length = 261 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + ++ F + G NG GKS++ ++I +L Sbjct: 1 MYIKNIVLDGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGITNLTHVRAT 60 Query: 86 SIKKRSIKT 94 +++ K+ Sbjct: 61 NLQDLIYKS 69 >gi|322707182|gb|EFY98761.1| chromosome segregation protein SudA, putative [Metarhizium anisopliae ARSEF 23] Length = 1202 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ A+ ++ Sbjct: 1 MYIKQIIIQGFKSYKEQTVIEPFSPKTNVIVGRNGSGKSNFFAAMRFVL 49 >gi|15239023|ref|NP_199671.1| ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3); ATP binding / transporter [Arabidopsis thaliana] gi|75333958|sp|Q9FJL0|SMC4_ARATH RecName: Full=Structural maintenance of chromosomes protein 4; Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome-associated protein C; Short=AtCAP-C gi|10177350|dbj|BAB10693.1| chromosome condensation protein [Arabidopsis thaliana] gi|332008311|gb|AED95694.1| structural maintenance of chromosomes protein 4 [Arabidopsis thaliana] Length = 1241 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 24 LYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 80 >gi|296166191|ref|ZP_06848632.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898439|gb|EFG78004.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 812 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I ++ FRG + LT++ G+NG GKS+L+EA+E G R Sbjct: 68 YLESISVAGFRGIGPEVTVPLQPGPGLTVIAGRNGSGKSTLAEALELALTGVNSR 122 >gi|308509448|ref|XP_003116907.1| hypothetical protein CRE_02183 [Caenorhabditis remanei] gi|308241821|gb|EFO85773.1| hypothetical protein CRE_02183 [Caenorhabditis remanei] Length = 577 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + +I+ F+ + G NG GKS++ ++I ++ Sbjct: 1 MYIKTILLDGFKSYQKPTEIKGFSPQFNAITGYNGSGKSNVLDSICFILGINKLDNIRAK 60 Query: 86 SI 87 S+ Sbjct: 61 SM 62 >gi|169783320|ref|XP_001826122.1| structural maintenance of chromosomes protein 4 [Aspergillus oryzae RIB40] gi|83774866|dbj|BAE64989.1| unnamed protein product [Aspergillus oryzae] Length = 1433 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + + +++F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 229 MVIKTLILNNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQGK 288 Query: 85 -DSIKKRSIKTP-MPMC 99 ++ S P +P C Sbjct: 289 ISALIHNSADFPDLPFC 305 >gi|115384434|ref|XP_001208764.1| chromosome segregation protein sudA [Aspergillus terreus NIH2624] gi|114196456|gb|EAU38156.1| chromosome segregation protein sudA [Aspergillus terreus NIH2624] Length = 1199 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|73971498|ref|XP_538759.2| PREDICTED: similar to Structural maintenance of chromosome 2-like 1 protein (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) isoform 1 [Canis familiaris] Length = 1191 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|67482463|ref|XP_656581.1| structural maintenance of chromosomes protein [Entamoeba histolytica HM-1:IMSS] gi|56473794|gb|EAL51197.1| structural maintenance of chromosomes protein [Entamoeba histolytica HM-1:IMSS] Length = 1197 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++ + ++ F+ + I + V G NG GKS+L +AI ++ G G Sbjct: 1 MWRIDKLTLTDFKSYKGTHVIPEFHNFQAVIGPNGAGKSNLMDAISFVL-GVKVGLLRGS 59 Query: 86 SIKKRSIKTP 95 ++K P Sbjct: 60 NLKDLIHDDP 69 >gi|125573018|gb|EAZ14533.1| hypothetical protein OsJ_04455 [Oryza sativa Japonica Group] Length = 1120 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ R+ Sbjct: 1 MHIKEICLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|115441687|ref|NP_001045123.1| Os01g0904400 [Oryza sativa Japonica Group] gi|56784538|dbj|BAD82795.1| SMC2 protein [Oryza sativa Japonica Group] gi|113534654|dbj|BAF07037.1| Os01g0904400 [Oryza sativa Japonica Group] Length = 1175 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ R+ Sbjct: 1 MHIKEICLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|325912222|ref|ZP_08174619.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 143-D] gi|325475881|gb|EGC79050.1| DNA replication and repair protein RecF [Lactobacillus iners UPII 143-D] Length = 276 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|167385644|ref|XP_001737430.1| structural maintenance of chromosomes protein [Entamoeba dispar SAW760] gi|165899778|gb|EDR26299.1| structural maintenance of chromosomes protein, putative [Entamoeba dispar SAW760] Length = 1203 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I + F+ + E E F H I+ G+NG GKS+ +AI+++ Sbjct: 1 MVFIKRISLKGFKSYQEQLNFEEFDPHYNIIIGRNGTGKSNFYDAIQFVLCDEKFGNLRA 60 Query: 85 DSIKKRSIK 93 + + Sbjct: 61 SDRQFLLYE 69 >gi|251778413|ref|ZP_04821333.1| ATPase involved in DNA repair [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082728|gb|EES48618.1| ATPase involved in DNA repair [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 589 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I I+ F+G+ + Q+ H T+V G NG GKSS+ EAI W G + Sbjct: 3 LEITNIAITGFKGYKDKQEYILG-HRTVVAGDNGLGKSSIGEAIVWALTGCDIWGNEKAA 61 Query: 87 IKKRSIKTPM 96 + + K P Sbjct: 62 TRLVNDKRPK 71 >gi|320095880|ref|ZP_08027508.1| hypothetical protein HMPREF9005_2120 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977184|gb|EFW08899.1| hypothetical protein HMPREF9005_2120 [Actinomyces sp. oral taxon 178 str. F0338] Length = 217 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ +E+ FT+ Q I+F L ++ G G GKS++ +A+ + YG R+K Sbjct: 1 MRIRRLEMVGIGPFTQRQVIDFTAFDESGLFLLEGPTGSGKSTIIDALTFALYGDVARQK 60 Query: 83 HGDSIKKRSIKTP 95 + RS + Sbjct: 61 DASKDRLRSNRLE 73 >gi|218189557|gb|EEC71984.1| hypothetical protein OsI_04829 [Oryza sativa Indica Group] Length = 1171 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ R+ Sbjct: 1 MHIKEICLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|163784051|ref|ZP_02179006.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] gi|159880678|gb|EDP74227.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] Length = 890 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 29 LLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F E K+ F + +T++ G NG GKSS+ EAI++ YG + + + Sbjct: 3 LKSLYLENFLAH-EETKLNFAENGITVLIGDNGAGKSSILEAIQFALYGSSSKGNISQLV 61 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 K K + + +Y+++ Sbjct: 62 KWGRKKAKIELEFIKNGSEYKIE 84 >gi|153010465|ref|YP_001371679.1| ATPase involved in DNA repair-like protein [Ochrobactrum anthropi ATCC 49188] gi|151562353|gb|ABS15850.1| ATPase involved in DNA repair-like protein [Ochrobactrum anthropi ATCC 49188] Length = 875 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +E+ +FR F E +I+ F D L IV N GKS+L EA+ F+ Sbjct: 3 LKSLEVENFRKFREPLRIDGFTDGLNIVVEPNETGKSTLLEALRAAFF 50 >gi|157136238|ref|XP_001656789.1| structural maintenance of chromosomes smc2 [Aedes aegypti] gi|108881057|gb|EAT45282.1| structural maintenance of chromosomes smc2 [Aedes aegypti] Length = 1182 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + +I F + G NG GKS++ ++I ++ Sbjct: 1 MYIKSIIIDGFKSYGKRTEIHGFDPEFNAITGLNGTGKSNILDSICFVLGISNLVHVRAT 60 Query: 86 SIKKRSIKT 94 S+++ K+ Sbjct: 61 SLQELVYKS 69 >gi|171686230|ref|XP_001908056.1| hypothetical protein [Podospora anserina S mat+] gi|170943076|emb|CAP68729.1| unnamed protein product [Podospora anserina S mat+] Length = 1200 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + E IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MHIKQIIIQGFKSYKEQTVIEPFSPKTNVIVGRNGSGKSNFFAAIRFVL 49 >gi|73971500|ref|XP_867410.1| PREDICTED: similar to Structural maintenance of chromosome 2-like 1 protein (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) isoform 2 [Canis familiaris] Length = 278 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLVYK 68 >gi|259047901|ref|ZP_05738302.1| DNA replication and repair protein RecF [Granulicatella adiacens ATCC 49175] gi|259035578|gb|EEW36833.1| DNA replication and repair protein RecF [Granulicatella adiacens ATCC 49175] Length = 375 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++++ +FR + E ++EF D + + G+N GK++L E+I L + R + Sbjct: 1 MKLTNLQLQNFRNY-ESVQLEFTDGVHVFIGENAQGKTNLMESIYALAMTKSHRTTNDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|154279276|ref|XP_001540451.1| hypothetical protein HCAG_04291 [Ajellomyces capsulatus NAm1] gi|150412394|gb|EDN07781.1| hypothetical protein HCAG_04291 [Ajellomyces capsulatus NAm1] Length = 1329 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D + G NG GKS+ +AI ++ G Sbjct: 72 KLIRLELFNFKSYKGHHTLLFGDAYFASIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 130 Query: 87 IKKRSIK 93 ++ + Sbjct: 131 LRDLVYR 137 >gi|150865365|ref|XP_001384551.2| Chromosome segregation and condensation [Scheffersomyces stipitis CBS 6054] gi|149386621|gb|ABN66522.2| Chromosome segregation and condensation [Scheffersomyces stipitis CBS 6054] Length = 1171 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I D + G NG GKS++ +AI ++ + Sbjct: 1 MKVDELIIDGFKSYATRTVISGWDGQFNAITGLNGSGKSNILDAICFVLGIASMATVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|148508244|gb|ABQ76030.1| predicted ATPase invovled in DNA repair [uncultured haloarchaeon] Length = 667 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +E+ +FR F Q++ F+ +++T+V+G NG GK++L WLFY Sbjct: 1 MELKRLEVENFRQFYGTQEVSFSLEESNNVTVVHGDNGAGKTTLLNTFLWLFY 53 >gi|110668020|ref|YP_657831.1| ATPase invovled in DNA repair [Haloquadratum walsbyi DSM 16790] gi|109625767|emb|CAJ52202.1| predicted ATPase invovled in DNA repair [Haloquadratum walsbyi DSM 16790] Length = 667 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +E+ +FR F Q++ F+ +++T+V+G NG GK++L WLFY Sbjct: 1 MELKRLEVENFRQFYGTQEVSFSLEESNNVTVVHGDNGAGKTTLLNTFLWLFY 53 >gi|254507673|ref|ZP_05119805.1| ATPase [Vibrio parahaemolyticus 16] gi|219549370|gb|EED26363.1| ATPase [Vibrio parahaemolyticus 16] Length = 583 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE----WLFYGYTQRRK 82 K+ +I I +FR F + +F ++ ++ G NG GK++L +AI+ WL + Sbjct: 92 VKIKEINIENFRNFDSLFLSDFDPNINVIVGTNGAGKTTLLDAIDTSLSWLRNSILKTGG 151 Query: 83 HGDSIKKRSI 92 G+ I ++ I Sbjct: 152 SGNYISEKDI 161 >gi|158334838|ref|YP_001516010.1| recombination protein F [Acaryochloris marina MBIC11017] gi|189039615|sp|B0CB57|RECF_ACAM1 RecName: Full=DNA replication and repair protein recF gi|158305079|gb|ABW26696.1| DNA replication and repair protein RecF [Acaryochloris marina MBIC11017] Length = 374 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + Q++EF+ TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLQQLHLIQFRNYVA-QQVEFSAPKTILVGPNAQGKSNLLEAVELLSTLKSHRVSRDRD 59 Query: 87 IKKRS 91 + K Sbjct: 60 LVKDG 64 >gi|302384448|ref|YP_003820270.1| DNA replication and repair protein RecF [Clostridium saccharolyticum WM1] gi|302195076|gb|ADL02647.1| DNA replication and repair protein RecF [Clostridium saccharolyticum WM1] Length = 361 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R + + ++F+ I+ G N GK+++ EAI + R I Sbjct: 3 IESIELKNYRNY-DELHMDFSQGTNILYGDNAQGKTNVLEAIYVCATTKSHRGSKDKEII 61 Query: 89 K 89 + Sbjct: 62 Q 62 >gi|291235426|ref|XP_002737646.1| PREDICTED: SMC (structural maintenance of chromosomes) family member (smc-4)-like [Saccoglossus kowalevskii] Length = 1172 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE +F+ + + + F + + + G NG GKS++ +A+ ++F GY + I Sbjct: 80 ITHIENENFKSYAGKRTLGPFHKNFSSIVGPNGSGKSNVIDAMLFVF-GYRANKIRSKKI 138 >gi|284051544|ref|ZP_06381754.1| hypothetical protein AplaP_08726 [Arthrospira platensis str. Paraca] Length = 688 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL I++ +FR F I + + T++ G NG GK+++ A W+ Y Sbjct: 1 MNLLSIQLCNFRQFYGKSPIIYLAKGERNTTVIYGNNGAGKTTILNAFSWVLY 53 >gi|156848905|ref|XP_001647333.1| hypothetical protein Kpol_1018p2 [Vanderwaltozyma polyspora DSM 70294] gi|156118019|gb|EDO19475.1| hypothetical protein Kpol_1018p2 [Vanderwaltozyma polyspora DSM 70294] Length = 1211 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+F + + IV G NG GKS+ AI ++ Sbjct: 1 MYIHRIVIKGFKTYRNETVIDFFSPNYNIVIGSNGSGKSNFFAAIRFVL 49 >gi|326489775|dbj|BAK01868.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1175 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ + F+ + + F + G NG GKS++ ++I ++ R Sbjct: 1 MHIKEVCLEGFKSYAGRTVVPGFDPLFNAITGLNGSGKSNILDSICFVLGITDLRAVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|256005661|ref|ZP_05430618.1| SMC domain protein [Clostridium thermocellum DSM 2360] gi|255990349|gb|EEU00474.1| SMC domain protein [Clostridium thermocellum DSM 2360] gi|316941016|gb|ADU75050.1| SMC domain protein [Clostridium thermocellum DSM 1313] Length = 696 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+I +FR F + + F + + ++ G N GKS+L +A+ +F T++ D Sbjct: 4 MYISKIQIKNFRNFKQFEA-HFNNGINVIIGHNNSGKSNLIKALALIFDSNTKKHLEIDD 62 Query: 87 IKK 89 K Sbjct: 63 FNK 65 >gi|162456573|ref|YP_001618940.1| hypothetical protein sce8290 [Sorangium cellulosum 'So ce 56'] gi|161167155|emb|CAN98460.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 375 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + +S++R E +I F LT++ G NG GKS++ +A+ ++ Sbjct: 2 INHLTVSNYRSLGENVRIHFGK-LTVLVGPNGSGKSNVMDALRFVAD 47 >gi|15669512|ref|NP_248322.1| purine NTPase [Methanocaldococcus jannaschii DSM 2661] gi|18202578|sp|Q58718|RAD50_METJA RecName: Full=DNA double-strand break repair rad50 ATPase gi|1591962|gb|AAB99331.1| purine NTPase [Methanocaldococcus jannaschii DSM 2661] Length = 1005 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I +++F+ +I+F + + G+NG GKSS+ EA+ + +G + I Sbjct: 5 LKEIRMNNFKSHV-NSRIKFEKGIVAIIGENGSGKSSIFEAVFFALFGAGSNFNYDTIIT 63 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 K + + V Y++ Sbjct: 64 KGKKSVYVELDFEVNGNNYKI 84 >gi|328354661|emb|CCA41058.1| Structural maintenance of chromosomes protein 2 [Pichia pastoris CBS 7435] Length = 1168 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISGWDSQFNAITGLNGSGKSNILDAICFVLGISSMTTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|320580809|gb|EFW95031.1| DNA repair protein RAD50 [Pichia angusta DL-1] Length = 732 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +S R F+ I+F LT++ G NG GK+++ EA+ + G Sbjct: 4 IYKLSVSGVRSFSGDTHETIQFERPLTLIVGANGSGKTTIIEALRYATTG 53 >gi|257215870|emb|CAX83087.1| structural maintenance of chromosomes protein 3 [Schistosoma japonicum] Length = 823 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQ 79 + + I FR + + EF+ H I+ G+NG GKS+ +AI+++ Y+ Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIVGRNGSGKSNFFQAIQFVLSDEYSH 55 >gi|149182287|ref|ZP_01860766.1| recombination protein F [Bacillus sp. SG-1] gi|148849979|gb|EDL64150.1| recombination protein F [Bacillus sp. SG-1] Length = 372 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + + I F +++ ++ G+N GK+++ E+I L + R + Sbjct: 1 MYIEEIQLKNYRNY-DSVDISFENNVNVILGENAQGKTNIMESIYVLAMAKSHRTSNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|57913907|ref|XP_554796.1| AGAP011425-PA [Anopheles gambiae str. PEST] gi|27227574|emb|CAD59404.1| SMC2 protein [Anopheles gambiae] gi|55237055|gb|EAL39499.1| AGAP011425-PA [Anopheles gambiae str. PEST] Length = 1187 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + +++ F + G NG GKS++ ++I ++ Sbjct: 1 MYIKSIVIDGFKSYGRRTEVQGFDPEFNAITGLNGTGKSNILDSICFVLGISNLVHVRAT 60 Query: 86 SIKKRSIKT 94 S++ K+ Sbjct: 61 SLQDLVYKS 69 >gi|291570151|dbj|BAI92423.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 688 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL I++ +FR F I + + T++ G NG GK+++ A W+ Y Sbjct: 1 MNLLSIQLCNFRQFYGKSPIIYLAKGERNTTVIYGNNGAGKTTILNAFSWVLY 53 >gi|311741697|ref|ZP_07715519.1| recombination protein F [Corynebacterium pseudogenitalium ATCC 33035] gi|311303218|gb|EFQ79299.1| recombination protein F [Corynebacterium pseudogenitalium ATCC 33035] Length = 391 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ ++ +T+ G+NG+GK+++ EAI + + + R H Sbjct: 1 MYVRDLDVRDFRSWPELN-VQLGPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVSHDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ + AV Sbjct: 60 LVRQGADSARVSITAV 75 >gi|281416945|ref|ZP_06247965.1| SMC domain protein [Clostridium thermocellum JW20] gi|281408347|gb|EFB38605.1| SMC domain protein [Clostridium thermocellum JW20] Length = 696 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+I +FR F + + F + + ++ G N GKS+L +A+ +F T++ D Sbjct: 4 MYISKIQIKNFRNFKQFEA-HFNNGINVIIGHNNSGKSNLIKALALIFDSNTKKHLEIDD 62 Query: 87 IKK 89 K Sbjct: 63 FNK 65 >gi|124506103|ref|XP_001351649.1| chromosome condensation protein, putative [Plasmodium falciparum 3D7] gi|23504577|emb|CAD51456.1| chromosome condensation protein, putative [Plasmodium falciparum 3D7] Length = 1708 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 7 KNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSS 65 KN CL + RK I + + + +F+ ++ ++ I F + + G NG GKS+ Sbjct: 47 KNNILCLKDVKVN---RKRII-IEKLVLENFKSYSGVKVIGPFYKKFSCIVGPNGSGKSN 102 Query: 66 LSEAIEWLFYGYTQRRKHGDSIKKR 90 + +A+ ++F G ++ + + Sbjct: 103 IIDAMLFVF-GRRAKKIRQNKLSDL 126 >gi|66819229|ref|XP_643274.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|74997287|sp|Q552D9|SMC3_DICDI RecName: Full=Structural maintenance of chromosome protein 3; Short=SMC protein 3; Short=SMC-3 gi|60471390|gb|EAL69350.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1437 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I FR + + I +V G+NG GKS+L AI +L Sbjct: 1 MFIKFIFIKGFRSYKDQGFTSITLHPGFNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSE 60 Query: 85 DSIK 88 D +K Sbjct: 61 DRLK 64 >gi|269217832|ref|ZP_06161686.1| DNA replication and repair protein RecF [Actinomyces sp. oral taxon 848 str. F0332] gi|269212767|gb|EEZ79107.1| DNA replication and repair protein RecF [Actinomyces sp. oral taxon 848 str. F0332] Length = 453 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ ++ FR + E + +T++ G+NG GK++L EA+ +L + R + Sbjct: 1 MYLSDLALTDFRSY-ERAIVALKPGVTVLVGENGQGKTNLIEAVGYLSTLSSHRVSGDAA 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LVRQG 64 >gi|309804875|ref|ZP_07698937.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 09V1-c] gi|308165814|gb|EFO68035.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 09V1-c] Length = 241 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|67925054|ref|ZP_00518434.1| RecF protein [Crocosphaera watsonii WH 8501] gi|67853101|gb|EAM48480.1| RecF protein [Crocosphaera watsonii WH 8501] Length = 380 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I + FR + E Q + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKNIHLYAFRNYHE-QTLNFESQKTILLGNNAQGKSNLLEAVELLATLKSHRTNRDRD 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LILEGEK 66 >gi|325092373|gb|EGC45683.1| mitotic cohesin complex [Ajellomyces capsulatus H88] Length = 1260 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + F D + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFASIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|229826861|ref|ZP_04452930.1| hypothetical protein GCWU000182_02245 [Abiotrophia defectiva ATCC 49176] gi|229788479|gb|EEP24593.1| hypothetical protein GCWU000182_02245 [Abiotrophia defectiva ATCC 49176] Length = 364 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + ++ FR E IEF L I+ G N GK+++ E+I + + Sbjct: 1 MRIKSLALNDFRNI-ENISIEFDKGLNIIYGDNAQGKTNILESIYVAGTTRSHKGSKDKE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 MIKLGED 66 >gi|17553272|ref|NP_497935.1| SMC (structural maintenance of chromosomes) family member (smc-4) [Caenorhabditis elegans] gi|29427679|sp|Q20060|SMC4_CAEEL RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4 gi|3876724|emb|CAA86336.1| C. elegans protein F35G12.8, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1549 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + ++E+ +F+ + I F T + G NG GKS+L +++ ++F Sbjct: 92 IRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFG 139 >gi|254572810|ref|XP_002493514.1| Component of the condensin complex, essential SMC chromosomal ATPase family member [Pichia pastoris GS115] gi|238033313|emb|CAY71335.1| Component of the condensin complex, essential SMC chromosomal ATPase family member [Pichia pastoris GS115] Length = 1133 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISGWDSQFNAITGLNGSGKSNILDAICFVLGISSMTTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|149369743|ref|ZP_01889595.1| possible ATPase involved in DNA repair [unidentified eubacterium SCB49] gi|149357170|gb|EDM45725.1| possible ATPase involved in DNA repair [unidentified eubacterium SCB49] Length = 701 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL +I+I++FR + + I+ +++ ++ G+NGYGK++ +I W YG + Sbjct: 1 MKLSEIKINNFRQYYKEVNIDLTTNSDENIILIGGKNGYGKTNFLISIVWCLYGRQIEKV 60 Query: 83 HGDSIKKRSIKTPM 96 D+ K+ IK Sbjct: 61 --DNNFKQEIKKEK 72 >gi|240103799|ref|YP_002960108.1| chromosome segregation protein [Thermococcus gammatolerans EJ3] gi|239911353|gb|ACS34244.1| DNA double-strand break repair rad50 ATPase (rad50) [Thermococcus gammatolerans EJ3] Length = 885 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ IEI +FR +EF+D + ++ GQNG GKSS+ EAI Y Sbjct: 1 MRVRKIEIRNFRAHR-KSIVEFSDGINLIIGQNGAGKSSILEAIFASLY 48 >gi|238493087|ref|XP_002377780.1| nuclear condensin complex subunit Smc4, putative [Aspergillus flavus NRRL3357] gi|220696274|gb|EED52616.1| nuclear condensin complex subunit Smc4, putative [Aspergillus flavus NRRL3357] Length = 1294 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 + + +++F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 90 MVIKTLILNNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQGK 149 Query: 85 -DSIKKRSIKTP-MPMC 99 ++ S P +P C Sbjct: 150 ISALIHNSADFPDLPFC 166 >gi|119946202|ref|YP_943882.1| hypothetical protein Ping_2562 [Psychromonas ingrahamii 37] gi|119864806|gb|ABM04283.1| conserved hypothetical protein [Psychromonas ingrahamii 37] Length = 541 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +++ + IEF + I+ G NG GKS++ EA + G HG Sbjct: 1 MYIERVNIYNYKCYYGKFSIEFNKGVNILVGDNGSGKSTILEAANLVLSGI----LHGKY 56 Query: 87 IK 88 +K Sbjct: 57 LK 58 >gi|312385392|gb|EFR29912.1| hypothetical protein AND_00851 [Anopheles darlingi] Length = 586 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I + V G NG GKS+ +AI ++ T Sbjct: 5 LKFIEVENFKSYRGRTVIGPLKQFSAVIGPNGSGKSNFMDAISFVMGEKT 54 >gi|312863962|ref|ZP_07724199.1| conserved hypothetical protein [Streptococcus vestibularis F0396] gi|311100528|gb|EFQ58734.1| conserved hypothetical protein [Streptococcus vestibularis F0396] Length = 601 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L I+I++FRG+ + ++F D+LT G+N GKS++ EA+E Sbjct: 1 MRLKQIKINNFRGYKDETIVDF-DNLTAFIGKNDVGKSTILEALE 44 >gi|261417504|ref|YP_003251186.1| recombination protein F [Geobacillus sp. Y412MC61] gi|297528380|ref|YP_003669655.1| DNA replication and repair protein RecF [Geobacillus sp. C56-T3] gi|319765162|ref|YP_004130663.1| DNA replication and repair protein RecF [Geobacillus sp. Y412MC52] gi|261373961|gb|ACX76704.1| DNA replication and repair protein RecF [Geobacillus sp. Y412MC61] gi|297251632|gb|ADI25078.1| DNA replication and repair protein RecF [Geobacillus sp. C56-T3] gi|317110028|gb|ADU92520.1| DNA replication and repair protein RecF [Geobacillus sp. Y412MC52] Length = 372 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++++R + E + + F + + ++ G+N GK+++ EAI L + R + Sbjct: 1 MFLTNLTLTNYRNY-EYETLNFGEGVNVILGENAQGKTNMMEAIYVLAMAKSHRTSNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|237808349|ref|YP_002892789.1| SMC domain-containing protein [Tolumonas auensis DSM 9187] gi|237500610|gb|ACQ93203.1| SMC domain protein [Tolumonas auensis DSM 9187] Length = 680 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL++I + ++R F ++F+ ++T+++G+NG GK+S+ A +W FYG Sbjct: 1 MKLINISLINYRQFFGENTLKFSVDPKQNITVIHGENGAGKTSILNAFKWCFYG 54 >gi|56418539|ref|YP_145857.1| recombination protein F [Geobacillus kaustophilus HTA426] gi|81675966|sp|Q5L3Y9|RECF_GEOKA RecName: Full=DNA replication and repair protein recF gi|56378381|dbj|BAD74289.1| DNA replication and repair protein [Geobacillus kaustophilus HTA426] Length = 372 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++++R + E + + F + + ++ G+N GK+++ EAI L + R + Sbjct: 1 MFLTNLTLTNYRNY-EYETLNFGEGVNVILGENAQGKTNMMEAIYVLAMAKSHRTSNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|148264525|ref|YP_001231231.1| SMC domain-containing protein [Geobacter uraniireducens Rf4] gi|146398025|gb|ABQ26658.1| SMC domain protein [Geobacter uraniireducens Rf4] Length = 699 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +FR F Q++ F+D ++T+V+ +NG+GK++L +A+ W FYG Sbjct: 3 LERLILENFRQFKGRQELVFSDLRERNVTVVHAENGFGKTTLLKALVWCFYG 54 >gi|327200667|pdb|3QKR|A Chain A, Mre11 Rad50 Binding Domain Bound To Rad50 gi|327200670|pdb|3QKS|A Chain A, Mre11 Rad50 Binding Domain Bound To Rad50 Length = 203 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|320161717|ref|YP_004174942.1| putative nuclease SbcCD subunit C [Anaerolinea thermophila UNI-1] gi|319995571|dbj|BAJ64342.1| putative nuclease SbcCD subunit C [Anaerolinea thermophila UNI-1] Length = 852 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I F + + +++ + L ++G NG GKSSL +AI W+ +G R D++ Sbjct: 4 KRLFIEGFLSYRQPVEVDLENLSLACISGSNGAGKSSLLDAITWVLFGKA--RARDDALI 61 Query: 89 KRSIK 93 + + Sbjct: 62 NSTSE 66 >gi|269118645|ref|YP_003306822.1| DNA replication and repair protein RecF [Sebaldella termitidis ATCC 33386] gi|268612523|gb|ACZ06891.1| DNA replication and repair protein RecF [Sebaldella termitidis ATCC 33386] Length = 362 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL + +++FR E +KIEF ++ G+NG GK+SL EA+ +L G + R K Sbjct: 1 MKLKQLSLNNFRCL-ENKKIEFDPDFNLIYGKNGQGKTSLIEAVYFLATGKSFRTKK 56 >gi|160944263|ref|ZP_02091492.1| hypothetical protein FAEPRAM212_01772 [Faecalibacterium prausnitzii M21/2] gi|158444445|gb|EDP21449.1| hypothetical protein FAEPRAM212_01772 [Faecalibacterium prausnitzii M21/2] Length = 373 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ ++R ++E LT++ G NG GK++L EAI L G + R Sbjct: 1 MRLLSLEVQNYRNICA-ARLEPGRELTVICGNNGQGKTNLLEAIWLLTGGKSFRGGKDAE 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LVRRG 64 >gi|113477327|ref|YP_723388.1| exonuclease SbcC [Trichodesmium erythraeum IMS101] gi|110168375|gb|ABG52915.1| exonuclease SbcC [Trichodesmium erythraeum IMS101] Length = 1016 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +++ +F + + ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 5 KLQLKNFLSYHQAT-LDFTGLHTACICGPNGAGKSSLLEAIAWAIWGNSRAATEDDIISL 63 Query: 90 RSIKT 94 +T Sbjct: 64 GEKET 68 >gi|123508009|ref|XP_001329542.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] gi|121912498|gb|EAY17319.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] Length = 177 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--------YGYT 78 KL IE+ +F+ F I + + G NG GKS++ +++ + Y Sbjct: 4 LKLARIELENFKSFRGPHTIGPFLPFSGIVGPNGAGKSNVLDSLAFSLFLDPNPRSTNYI 63 Query: 79 QRRKHGDSIKKRSIKT 94 + S K ++T Sbjct: 64 YKDPTDTSAKFCFVRT 79 >gi|81301059|ref|YP_401267.1| recombination protein F [Synechococcus elongatus PCC 7942] gi|97181064|sp|Q31KY9|RECF_SYNE7 RecName: Full=DNA replication and repair protein recF gi|81169940|gb|ABB58280.1| DNA replication and repair protein RecF [Synechococcus elongatus PCC 7942] Length = 387 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + + Q ++F TI+ G+N GK++L EA+E + R Sbjct: 1 MFLHSLHLQHFRNYRD-QTVQFQAPKTILLGENAQGKTNLLEAVELFSTLRSHRVSRDRD 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 LVQTGAES 67 >gi|56751857|ref|YP_172558.1| recombination protein F [Synechococcus elongatus PCC 6301] gi|81820589|sp|Q5N0Y2|RECF_SYNP6 RecName: Full=DNA replication and repair protein recF gi|56686816|dbj|BAD80038.1| DNA replication and repair protein RecF [Synechococcus elongatus PCC 6301] Length = 387 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + HFR + + Q ++F TI+ G+N GK++L EA+E + R Sbjct: 1 MFLHSLHLQHFRNYRD-QTVQFQAPKTILLGENAQGKTNLLEAVELFSTLRSHRVSRDRD 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 LVQTGAES 67 >gi|327310670|ref|YP_004337567.1| purine NTPase [Thermoproteus uzoniensis 768-20] gi|326947149|gb|AEA12255.1| purine NTPase [Thermoproteus uzoniensis 768-20] Length = 706 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRKHG 84 L IE+ +F+ E+ +F + + + G NG GKSSL EA+ YG + + Sbjct: 2 LRSIELRNFKAHEELAA-DFVEGVNFIYGPNGAGKSSLLEAVAVALYGSKWVQKVKARWA 60 Query: 85 DSIKKRSIK 93 D +++ + + Sbjct: 61 DLVRRGASE 69 >gi|45201332|ref|NP_986902.1| AGR236Wp [Ashbya gossypii ATCC 10895] gi|44986186|gb|AAS54726.1| AGR236Wp [Ashbya gossypii ATCC 10895] Length = 1170 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ ++I ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVISGWDPQFNAITGLNGSGKSNILDSICFVLGISSMATVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|328876510|gb|EGG24873.1| structural maintenance of chromosome protein [Dictyostelium fasciculatum] Length = 1476 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +E+ +F+ + + + V G NG GKS+L +AI ++ + + Sbjct: 4 IDSLEVKNFKSYKGTHILGPFLQFSCVIGPNGSGKSNLMDAITFVLGVSSATSTRSN 60 >gi|149240199|ref|XP_001525975.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450098|gb|EDK44354.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1173 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + + Sbjct: 1 MKVDELIIDGFKSYATRTVISGWDASFNAITGLNGSGKSNILDAICFVLGISSMQTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|50549059|ref|XP_502000.1| YALI0C19129p [Yarrowia lipolytica] gi|49647867|emb|CAG82320.1| YALI0C19129p [Yarrowia lipolytica] Length = 1606 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 318 ISNLVLTNFKSYAGRQEVGPFHSSFSAVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 374 >gi|17535279|ref|NP_496331.1| MItosis and X associated family member (mix-1) [Caenorhabditis elegans] gi|8488992|sp|Q09591|MIX1_CAEEL RecName: Full=Mitotic chromosome and X-chromosome-associated protein mix-1; AltName: Full=Lethal protein 29; AltName: Full=Structural maintenance of chromosomes protein 2 gi|2088621|gb|AAC47834.1| mitotic chromosome and X-chromosome associated MIX-1 protein [Caenorhabditis elegans] gi|3878717|emb|CAA87054.1| C. elegans protein M106.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3878912|emb|CAA86786.1| C. elegans protein M106.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3880446|emb|CAA20330.1| C. elegans protein M106.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1244 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ + + I +F+ + G NG GKS++ ++I ++ Sbjct: 1 MHIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAK 60 Query: 86 SI 87 S+ Sbjct: 61 SM 62 >gi|254172444|ref|ZP_04879119.1| DNA double-strand break repair Rad50 ATPase [Thermococcus sp. AM4] gi|214033373|gb|EEB74200.1| DNA double-strand break repair Rad50 ATPase [Thermococcus sp. AM4] Length = 885 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ IEI +FR +EF+D + ++ GQNG GKSS+ EAI Y Sbjct: 1 MRVRKIEIRNFRAHR-KSVVEFSDGINLIIGQNGAGKSSILEAIFASLY 48 >gi|242088357|ref|XP_002440011.1| hypothetical protein SORBIDRAFT_09g024390 [Sorghum bicolor] gi|241945296|gb|EES18441.1| hypothetical protein SORBIDRAFT_09g024390 [Sorghum bicolor] Length = 1244 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 T A K + ++ + +F+ + Q+I F + V G NG GKS++ +A+ ++F G Sbjct: 14 TPRRAAKPRLFIKEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-G 72 Query: 77 YTQRRKH 83 ++ Sbjct: 73 KRAKQMR 79 >gi|229824638|ref|ZP_04450707.1| hypothetical protein GCWU000282_01985 [Catonella morbi ATCC 51271] gi|229786009|gb|EEP22123.1| hypothetical protein GCWU000282_01985 [Catonella morbi ATCC 51271] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++SHFR + I+ + LTI+ G+N GK++L E+I L + R H Sbjct: 1 MKLKTLKLSHFRNYQGIE-LCLGPGLTILTGENAQGKTNLLESIFLLSLAKSHRTNHDSE 59 Query: 87 IKKRSIKTPM 96 + + + Sbjct: 60 MIEWDQEQAR 69 >gi|315146257|gb|EFT90273.1| RecF/RecN/SMC protein [Enterococcus faecalis TX4244] Length = 493 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 31/55 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + I++++FR F Q +EF + + G N GK+++ +AIE++ G T+ Sbjct: 1 MYISKIKLTNFRCFQGTQTLEFCEGMNFFVGNNNSGKTTIFKAIEFIQSGKTKEN 55 >gi|229816999|ref|ZP_04447281.1| hypothetical protein BIFANG_02254 [Bifidobacterium angulatum DSM 20098] gi|229785744|gb|EEP21858.1| hypothetical protein BIFANG_02254 [Bifidobacterium angulatum DSM 20098] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 10/77 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR------ 80 + + + HFR + ++ ++F + ++ G NG GK++L EA+E L G + R Sbjct: 1 MYISRLALDHFRSWNQVV-VDFTPGVNVLYGANGLGKTNLVEAVEVLSTGGSHRVNSSLP 59 Query: 81 ---RKHGDSIKKRSIKT 94 R +G + + + T Sbjct: 60 LVERGYGKATIRVNANT 76 >gi|225386350|ref|ZP_03756114.1| hypothetical protein CLOSTASPAR_00094 [Clostridium asparagiforme DSM 15981] gi|225047532|gb|EEG57778.1| hypothetical protein CLOSTASPAR_00094 [Clostridium asparagiforme DSM 15981] Length = 361 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R + E +E + I+ G N GK+++ EA+ + + I Sbjct: 3 IESIELKNYRNY-EELHMELNEGTNILYGDNAQGKTNILEAVYVCCTSKSHKNAKDRDII 61 Query: 89 KRSIK 93 + Sbjct: 62 RFDQD 66 >gi|14488688|pdb|1II8|A Chain A, Crystal Structure Of The P. Furiosus Rad50 Atpase Domain Length = 195 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|302342434|ref|YP_003806963.1| SMC domain protein [Desulfarculus baarsii DSM 2075] gi|301639047|gb|ADK84369.1| SMC domain protein [Desulfarculus baarsii DSM 2075] Length = 947 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKHGD 85 + I++ +FRG +++F+ +T++ NG GK++L +A E LF +R + D Sbjct: 3 VQFSSIKVVNFRGLAGSIELDFSSPITLIYAPNGTGKTTLLQAAELLFTRRIRSKRINAD 62 >gi|268325372|emb|CBH38960.1| hypothetical protein BSM_24370 [uncultured archaeon] Length = 74 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R + + +E D + + G NG GK++ E+I W+ +G+ R + Sbjct: 1 MLLKTLTLRNYRKY-KNVNVEIPDGVIGIIGLNGVGKTTFIESIGWVLFGHHAARTTKEL 59 Query: 87 IKKRS 91 IK+ Sbjct: 60 IKREG 64 >gi|183232409|ref|XP_655216.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169802055|gb|EAL49829.2| hypothetical protein EHI_164820 [Entamoeba histolytica HM-1:IMSS] Length = 1201 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I + F+ + E + F H +V G+NG GKS+ +AI+++ Sbjct: 1 MVFIKRISLKGFKSYQEQLNFDEFDPHYNVVIGRNGSGKSNFYDAIQFVLCDEKFGNLRA 60 Query: 85 DSIKKRSIK 93 + + Sbjct: 61 GDRQFLLYE 69 >gi|150399403|ref|YP_001323170.1| SMC domain-containing protein [Methanococcus vannielii SB] gi|150012106|gb|ABR54558.1| SMC domain protein [Methanococcus vannielii SB] Length = 1019 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+I +F+ K++ +T + G NG GKSS+ +A+ + + D++ Sbjct: 3 IKSIKIENFKSHR-NTKLQLNKGITTIIGHNGSGKSSIFQAMNFALFSPRGANFKIDNMM 61 Query: 89 KRSIKT 94 ++ K+ Sbjct: 62 QKGSKS 67 >gi|317472421|ref|ZP_07931746.1| DNA replication and repair protein RecF [Anaerostipes sp. 3_2_56FAA] gi|316900141|gb|EFV22130.1| DNA replication and repair protein RecF [Anaerostipes sp. 3_2_56FAA] Length = 130 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ ++R + + IEF+ I+ G N GK+++ EA+ + R Sbjct: 1 MYIQSLELKNYRNY-DRLIIEFSSGTNILYGDNAQGKTNILEAVYLGATTKSHRGSKDKE 59 Query: 87 IKKRS 91 I + Sbjct: 60 IIRFG 64 >gi|188996887|ref|YP_001931138.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931954|gb|ACD66584.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 891 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I + +F E ++EF+ + +T + G+NG GKSS+ EAI++ F+G + + D I Sbjct: 3 LKKIVLKNFLIH-EDTQLEFSPNGITAIIGENGSGKSSIIEAIQFAFFGDSDKGNLKDLI 61 Query: 88 K--KRSIKTPMPM 98 K +R K + Sbjct: 62 KWGRRQAKVELEF 74 >gi|154249435|ref|YP_001410260.1| SMC domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153371|gb|ABS60603.1| SMC domain protein [Fervidobacterium nodosum Rt17-B1] Length = 935 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F+ + + +F + ++ G+NG GKSS+ EA+ +G ++++ + Sbjct: 2 INKIKLENFKCHLDRE-FDFVSGINVIVGRNGAGKSSIFEALGMALFGISEKKPKDLISR 60 Query: 89 KRSIKTPMPMCM 100 S + + + Sbjct: 61 LSSQNSYFKINV 72 >gi|117927214|ref|YP_871765.1| recombination protein F [Acidothermus cellulolyticus 11B] gi|166220694|sp|A0LQR9|RECF_ACIC1 RecName: Full=DNA replication and repair protein recF gi|117647677|gb|ABK51779.1| DNA replication and repair protein RecF [Acidothermus cellulolyticus 11B] Length = 371 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E++ FR + +E + + G NG GK++L EA+ +L + R Sbjct: 1 MYLSRLELTDFRSYR-RAALELDPGVNVFVGSNGQGKTNLVEAVCYLALLRSHRTATDAP 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LVRQGSE 66 >gi|320583806|gb|EFW98019.1| putative nuclear condensin complex SMC ATPase [Pichia angusta DL-1] Length = 1171 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ + F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELVLDGFKSYAVRTVISSWDPQFNAITGLNGSGKSNILDAICFVLGISSMSTVRAA 60 Query: 86 SIKKRSIK 93 S++ K Sbjct: 61 SLQDLIYK 68 >gi|289422543|ref|ZP_06424386.1| DNA replication and repair protein RecF [Peptostreptococcus anaerobius 653-L] gi|289157115|gb|EFD05737.1| DNA replication and repair protein RecF [Peptostreptococcus anaerobius 653-L] Length = 371 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + ++ I+F +H+ ++ G+NG GK+++ E++ + G + R Sbjct: 1 MHINSLKLVNYRNYNDL-SIDFNEHINLILGKNGQGKTNIVESLTLIAIGKSFRTSKDKE 59 Query: 87 IKKRSIKT 94 + K + Sbjct: 60 LIKFDKDS 67 >gi|268323972|emb|CBH37560.1| hypothetical protein containing RecF/RecN/SMC N terminal domain [uncultured archaeon] Length = 920 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R + + +E D + + G NG GK++L E+I W+ +G+ R + Sbjct: 1 MLLKTLTLRNYRKY-KNVNVEIPDGVIGIIGLNGVGKTTLIESIGWVLFGHHAARTTKEL 59 Query: 87 IKKRS 91 IK+ Sbjct: 60 IKREG 64 >gi|257084589|ref|ZP_05578950.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256992619|gb|EEU79921.1| conserved hypothetical protein [Enterococcus faecalis Fly1] Length = 674 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +EI +FR F + + D T + G N GK+++ AI +F R+ D Sbjct: 1 MKLTRLEICNFRSFGSEAETIYFDEFTGIIGHNSAGKTTILNAINAMFGNLKLRK--SDF 58 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 + P+ + + + K++ Sbjct: 59 YADNNESENEPLSLWI-KAKFEF 80 >gi|255324006|ref|ZP_05365131.1| DNA replication and repair protein RecF [Corynebacterium tuberculostearicum SK141] gi|255298863|gb|EET78155.1| DNA replication and repair protein RecF [Corynebacterium tuberculostearicum SK141] Length = 403 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ ++ +T+ G+NG+GK+++ EAI + + + R + Sbjct: 1 MYVRDLDVRDFRSWPELN-VQLGPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVSYDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ + AV Sbjct: 60 LVRQGADSARVSITAV 75 >gi|325288204|ref|YP_004264385.1| DNA replication and repair protein RecF [Syntrophobotulus glycolicus DSM 8271] gi|324963605|gb|ADY54384.1| DNA replication and repair protein RecF [Syntrophobotulus glycolicus DSM 8271] Length = 366 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ +FR ++E Q+I F + + I+ G NG GK+++ E I +L G + R Sbjct: 1 MLIHNLYFKNFRNYSE-QEITFTNGINILVGSNGQGKTNVLEGIYYLLMGKSYRVNQESE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIYWGQK 66 >gi|253581084|ref|ZP_04858344.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847620|gb|EES75590.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 361 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + + +++ A I G N GK+++ EA+ + + Sbjct: 1 MYIESVQLKNFRNY-DSLELDLAQGTNIFYGNNAQGKTNILEALYLCGTTKSHKGSRDKD 59 Query: 87 IKKRSIKTPMPMCMAVPR 104 + + K + M V R Sbjct: 60 MIQFG-KDESHIRMMVKR 76 >gi|220916213|ref|YP_002491517.1| SMC domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954067|gb|ACL64451.1| SMC domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 808 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 27/52 (51%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +I +L + I FR F + + +V+G NG GKSS+ AIE+ G Sbjct: 1 MIARLKRLSIKGFRRFEVEATVPLDADVILVHGPNGTGKSSVLNAIEFGLTG 52 >gi|306842702|ref|ZP_07475345.1| DNA replication and repair protein RecF [Brucella sp. BO2] gi|306287148|gb|EFM58650.1| DNA replication and repair protein RecF [Brucella sp. BO2] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|294851413|ref|ZP_06792086.1| DNA replication and repair protein recF [Brucella sp. NVSL 07-0026] gi|294820002|gb|EFG37001.1| DNA replication and repair protein recF [Brucella sp. NVSL 07-0026] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|284161186|ref|YP_003399809.1| SMC domain protein [Archaeoglobus profundus DSM 5631] gi|284011183|gb|ADB57136.1| SMC domain protein [Archaeoglobus profundus DSM 5631] Length = 868 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRK 82 + +EI +F+ ++EF + ++ G+NG GK+S+ EAI YG Sbjct: 1 MLIKYVEIENFKSHRS-SRVEFDRGVNLIVGRNGAGKTSILEAIAVALYGVKHGVKPSGV 59 Query: 83 HGDSIKKRS 91 D + + S Sbjct: 60 KKDDLIRDS 68 >gi|256060148|ref|ZP_05450330.1| recombination protein F [Brucella neotomae 5K33] gi|261324125|ref|ZP_05963322.1| DNA replication and repair protein recF [Brucella neotomae 5K33] gi|261300105|gb|EEY03602.1| DNA replication and repair protein recF [Brucella neotomae 5K33] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|254718227|ref|ZP_05180038.1| recombination protein F [Brucella sp. 83/13] gi|265983183|ref|ZP_06095918.1| DNA replication and repair protein recF [Brucella sp. 83/13] gi|306839967|ref|ZP_07472761.1| DNA replication and repair protein RecF [Brucella sp. NF 2653] gi|264661775|gb|EEZ32036.1| DNA replication and repair protein recF [Brucella sp. 83/13] gi|306404931|gb|EFM61216.1| DNA replication and repair protein RecF [Brucella sp. NF 2653] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|254713411|ref|ZP_05175222.1| recombination protein F [Brucella ceti M644/93/1] gi|254716232|ref|ZP_05178043.1| recombination protein F [Brucella ceti M13/05/1] gi|261218005|ref|ZP_05932286.1| DNA replication and repair protein recF [Brucella ceti M13/05/1] gi|261321145|ref|ZP_05960342.1| DNA replication and repair protein recF [Brucella ceti M644/93/1] gi|260923094|gb|EEX89662.1| DNA replication and repair protein recF [Brucella ceti M13/05/1] gi|261293835|gb|EEX97331.1| DNA replication and repair protein recF [Brucella ceti M644/93/1] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|254700821|ref|ZP_05162649.1| recombination protein F [Brucella suis bv. 5 str. 513] gi|261751327|ref|ZP_05995036.1| DNA replication and repair protein recF [Brucella suis bv. 5 str. 513] gi|261741080|gb|EEY29006.1| DNA replication and repair protein recF [Brucella suis bv. 5 str. 513] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|254694809|ref|ZP_05156637.1| recombination protein F [Brucella abortus bv. 3 str. Tulya] gi|261215134|ref|ZP_05929415.1| DNA replication and repair protein recF [Brucella abortus bv. 3 str. Tulya] gi|260916741|gb|EEX83602.1| DNA replication and repair protein recF [Brucella abortus bv. 3 str. Tulya] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|225626554|ref|ZP_03784593.1| DNA replication and repair protein RecF [Brucella ceti str. Cudo] gi|260169593|ref|ZP_05756404.1| recombination protein F [Brucella sp. F5/99] gi|261759119|ref|ZP_06002828.1| DNA replication and repair protein recF [Brucella sp. F5/99] gi|225618211|gb|EEH15254.1| DNA replication and repair protein RecF [Brucella ceti str. Cudo] gi|261739103|gb|EEY27099.1| DNA replication and repair protein recF [Brucella sp. F5/99] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|209523386|ref|ZP_03271941.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496128|gb|EDZ96428.1| SMC domain protein [Arthrospira maxima CS-328] Length = 403 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ ++I++FRGF E + EF + ++ G NG GKSS+ +A+ F Sbjct: 1 MQINHLKITNFRGF-EQAEFEFQPGMNLIVGINGVGKSSVLDALRIAF 47 >gi|148560734|ref|YP_001258052.1| recombination protein F [Brucella ovis ATCC 25840] gi|148371991|gb|ABQ61970.1| recF protein [Brucella ovis ATCC 25840] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|23500919|ref|NP_697046.1| recombination protein F [Brucella suis 1330] gi|161617994|ref|YP_001591881.1| recombination protein F [Brucella canis ATCC 23365] gi|163842280|ref|YP_001626684.1| recombination protein F [Brucella suis ATCC 23445] gi|254705188|ref|ZP_05167016.1| recombination protein F [Brucella suis bv. 3 str. 686] gi|254707296|ref|ZP_05169124.1| recombination protein F [Brucella pinnipedialis M163/99/10] gi|254709165|ref|ZP_05170976.1| recombination protein F [Brucella pinnipedialis B2/94] gi|256030689|ref|ZP_05444303.1| recombination protein F [Brucella pinnipedialis M292/94/1] gi|256158693|ref|ZP_05456572.1| recombination protein F [Brucella ceti M490/95/1] gi|256254094|ref|ZP_05459630.1| recombination protein F [Brucella ceti B1/94] gi|256368468|ref|YP_003105974.1| recombination protein F [Brucella microti CCM 4915] gi|260567346|ref|ZP_05837816.1| DNA replication and repair protein recF [Brucella suis bv. 4 str. 40] gi|261221234|ref|ZP_05935515.1| DNA replication and repair protein recF [Brucella ceti B1/94] gi|261314777|ref|ZP_05953974.1| DNA replication and repair protein recF [Brucella pinnipedialis M163/99/10] gi|261316662|ref|ZP_05955859.1| DNA replication and repair protein recF [Brucella pinnipedialis B2/94] gi|261755892|ref|ZP_05999601.1| DNA replication and repair protein recF [Brucella suis bv. 3 str. 686] gi|265987734|ref|ZP_06100291.1| DNA replication and repair protein recF [Brucella pinnipedialis M292/94/1] gi|265997195|ref|ZP_06109752.1| DNA replication and repair protein recF [Brucella ceti M490/95/1] gi|306843605|ref|ZP_07476206.1| DNA replication and repair protein RecF [Brucella sp. BO1] gi|38258604|sp|Q8G3E5|RECF_BRUSU RecName: Full=DNA replication and repair protein recF gi|23346772|gb|AAN28961.1| recF protein [Brucella suis 1330] gi|161334805|gb|ABX61110.1| DNA replication and repair protein RecF [Brucella canis ATCC 23365] gi|163673003|gb|ABY37114.1| DNA replication and repair protein RecF [Brucella suis ATCC 23445] gi|255998626|gb|ACU47025.1| recombination protein F [Brucella microti CCM 4915] gi|260156864|gb|EEW91944.1| DNA replication and repair protein recF [Brucella suis bv. 4 str. 40] gi|260919818|gb|EEX86471.1| DNA replication and repair protein recF [Brucella ceti B1/94] gi|261295885|gb|EEX99381.1| DNA replication and repair protein recF [Brucella pinnipedialis B2/94] gi|261303803|gb|EEY07300.1| DNA replication and repair protein recF [Brucella pinnipedialis M163/99/10] gi|261745645|gb|EEY33571.1| DNA replication and repair protein recF [Brucella suis bv. 3 str. 686] gi|262551663|gb|EEZ07653.1| DNA replication and repair protein recF [Brucella ceti M490/95/1] gi|264659931|gb|EEZ30192.1| DNA replication and repair protein recF [Brucella pinnipedialis M292/94/1] gi|306276296|gb|EFM57996.1| DNA replication and repair protein RecF [Brucella sp. BO1] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|17988224|ref|NP_540858.1| recombination protein F [Brucella melitensis bv. 1 str. 16M] gi|62288994|ref|YP_220787.1| recombination protein F [Brucella abortus bv. 1 str. 9-941] gi|82698935|ref|YP_413509.1| recombination protein F [Brucella melitensis biovar Abortus 2308] gi|189023271|ref|YP_001934039.1| recombination protein F [Brucella abortus S19] gi|225851549|ref|YP_002731782.1| recombination protein F [Brucella melitensis ATCC 23457] gi|237814484|ref|ZP_04593482.1| DNA replication and repair protein RecF [Brucella abortus str. 2308 A] gi|254690320|ref|ZP_05153574.1| recombination protein F [Brucella abortus bv. 6 str. 870] gi|254696437|ref|ZP_05158265.1| recombination protein F [Brucella abortus bv. 2 str. 86/8/59] gi|254731349|ref|ZP_05189927.1| recombination protein F [Brucella abortus bv. 4 str. 292] gi|256045793|ref|ZP_05448671.1| recombination protein F [Brucella melitensis bv. 1 str. Rev.1] gi|256112512|ref|ZP_05453433.1| recombination protein F [Brucella melitensis bv. 3 str. Ether] gi|256258574|ref|ZP_05464110.1| recombination protein F [Brucella abortus bv. 9 str. C68] gi|256264942|ref|ZP_05467474.1| recombination protein F [Brucella melitensis bv. 2 str. 63/9] gi|260546288|ref|ZP_05822028.1| recombination protein F [Brucella abortus NCTC 8038] gi|260563086|ref|ZP_05833572.1| recombination protein F [Brucella melitensis bv. 1 str. 16M] gi|260755859|ref|ZP_05868207.1| DNA replication and repair protein recF [Brucella abortus bv. 6 str. 870] gi|260759082|ref|ZP_05871430.1| DNA replication and repair protein recF [Brucella abortus bv. 4 str. 292] gi|260760808|ref|ZP_05873151.1| DNA replication and repair protein recF [Brucella abortus bv. 2 str. 86/8/59] gi|260884884|ref|ZP_05896498.1| DNA replication and repair protein recF [Brucella abortus bv. 9 str. C68] gi|265992208|ref|ZP_06104765.1| DNA replication and repair protein recF [Brucella melitensis bv. 1 str. Rev.1] gi|265993948|ref|ZP_06106505.1| DNA replication and repair protein recF [Brucella melitensis bv. 3 str. Ether] gi|297247411|ref|ZP_06931129.1| DNA replication and repair protein recF [Brucella abortus bv. 5 str. B3196] gi|20978586|sp|Q8YED7|RECF_BRUME RecName: Full=DNA replication and repair protein recF gi|81309491|sp|Q57G08|RECF_BRUAB RecName: Full=DNA replication and repair protein recF gi|97180679|sp|Q2YPM3|RECF_BRUA2 RecName: Full=DNA replication and repair protein recF gi|17983989|gb|AAL53122.1| recf protein [Brucella melitensis bv. 1 str. 16M] gi|62195126|gb|AAX73426.1| RecF, recF protein [Brucella abortus bv. 1 str. 9-941] gi|82615036|emb|CAJ09959.1| RecF protein:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase:SMC protein, N-terminal:AAA ATPase [Brucella melitensis biovar Abortus 2308] gi|189018843|gb|ACD71565.1| recombination protein F [Brucella abortus S19] gi|225639914|gb|ACN99827.1| DNA replication and repair protein RecF [Brucella melitensis ATCC 23457] gi|237789321|gb|EEP63531.1| DNA replication and repair protein RecF [Brucella abortus str. 2308 A] gi|260096395|gb|EEW80271.1| recombination protein F [Brucella abortus NCTC 8038] gi|260153102|gb|EEW88194.1| recombination protein F [Brucella melitensis bv. 1 str. 16M] gi|260669400|gb|EEX56340.1| DNA replication and repair protein recF [Brucella abortus bv. 4 str. 292] gi|260671240|gb|EEX58061.1| DNA replication and repair protein recF [Brucella abortus bv. 2 str. 86/8/59] gi|260675967|gb|EEX62788.1| DNA replication and repair protein recF [Brucella abortus bv. 6 str. 870] gi|260874412|gb|EEX81481.1| DNA replication and repair protein recF [Brucella abortus bv. 9 str. C68] gi|262764929|gb|EEZ10850.1| DNA replication and repair protein recF [Brucella melitensis bv. 3 str. Ether] gi|263003274|gb|EEZ15567.1| DNA replication and repair protein recF [Brucella melitensis bv. 1 str. Rev.1] gi|263095427|gb|EEZ19028.1| recombination protein F [Brucella melitensis bv. 2 str. 63/9] gi|297174580|gb|EFH33927.1| DNA replication and repair protein recF [Brucella abortus bv. 5 str. B3196] gi|326408014|gb|ADZ65079.1| recombination protein F [Brucella melitensis M28] gi|326537732|gb|ADZ85947.1| DNA replication and repair protein RecF [Brucella melitensis M5-90] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSIK 93 + + + + Sbjct: 73 VARANAE 79 >gi|329666213|pdb|3QG5|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair gi|329666214|pdb|3QG5|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair Length = 365 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-DS 86 + + + +F G + IEF +T+V G NG GKSSL EAI + +G R + D Sbjct: 2 RPERLTVRNFLGL-KNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDY 60 Query: 87 IKKRSIK 93 + + ++ Sbjct: 61 VNRNAVD 67 >gi|309811142|ref|ZP_07704939.1| putative nuclease sbcCD subunit C [Dermacoccus sp. Ellin185] gi|308434930|gb|EFP58765.1| putative nuclease sbcCD subunit C [Dermacoccus sp. Ellin185] Length = 285 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + + F F + I+F + ++NG G GKSSL +AI + +G Sbjct: 1 MRLHSLTLEAFGPFPGREHIDFDALDQGILLINGPTGSGKSSLLDAIAFALFG 53 >gi|220930091|ref|YP_002507000.1| SMC domain protein [Clostridium cellulolyticum H10] gi|220000419|gb|ACL77020.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 1036 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ ++ I FR + ++Q +F + L ++ NGYGK+S +AIEW R Sbjct: 4 KIKEVSIEAFRAYEKLQPFDFRHNDSGKIADLVVIYAPNGYGKTSFFDAIEWAITDEIGR 63 Query: 81 RKHGDSIKK 89 K D+IK+ Sbjct: 64 LKSTDAIKQ 72 >gi|15893302|ref|NP_346651.1| recombination protein F [Clostridium acetobutylicum ATCC 824] gi|20978635|sp|Q97N32|RECF_CLOAB RecName: Full=DNA replication and repair protein recF gi|15022821|gb|AAK77991.1|AE007513_4 RecF, ABC family ATPase [Clostridium acetobutylicum ATCC 824] gi|325507411|gb|ADZ19047.1| recombination protein F [Clostridium acetobutylicum EA 2018] Length = 363 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +I+F + I+ G N GK+++ E+I + G + R Sbjct: 1 MYIKNLYLDNFRNY-DNIEIDFNKKVNILTGNNAQGKTNILESIFYCSLGKSHRTNKDKE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|126175901|ref|YP_001052050.1| SMC domain-containing protein [Shewanella baltica OS155] gi|125999106|gb|ABN63181.1| SMC domain protein [Shewanella baltica OS155] Length = 881 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I + FRGF ++ + + + + G NG GK+SL EA+E+ G Sbjct: 86 LCHISLGPFRGFRNVEDFDLSRRIVLFYGPNGSGKTSLCEALEFALLG 133 >gi|15789741|ref|NP_279565.1| chromosome segregation protein [Halobacterium sp. NRC-1] gi|169235456|ref|YP_001688656.1| chromosome segregation protein [Halobacterium salinarum R1] gi|49036459|sp|Q9HRW3|RAD50_HALSA RecName: Full=DNA double-strand break repair rad50 ATPase gi|10580117|gb|AAG19045.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167726522|emb|CAP13307.1| DNA double-strand break repair ATPase [Halobacterium salinarum R1] Length = 883 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + +S+F+ + + + +T+++G NG GKSSL +A + YG T Sbjct: 1 MRFTRLSLSNFKCYADAA-VSLDPGVTVIHGLNGSGKSSLLDACFFALYGTTA 52 >gi|308456383|ref|XP_003090636.1| hypothetical protein CRE_25955 [Caenorhabditis remanei] gi|308262100|gb|EFP06053.1| hypothetical protein CRE_25955 [Caenorhabditis remanei] Length = 386 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI +F+ + I T + G NG GKS+L +AI ++ Sbjct: 16 LDTLEIENFKSYKGFHLIGPFSRFTAIIGPNGSGKSNLMDAISFVLGE 63 >gi|294955762|ref|XP_002788667.1| Structural maintenance of chromosome, putative [Perkinsus marinus ATCC 50983] gi|239904208|gb|EER20463.1| Structural maintenance of chromosome, putative [Perkinsus marinus ATCC 50983] Length = 1222 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I ++ + ++ I + + ++ G NG GKS++ AI + G Sbjct: 1 MHLKKLTIKGYKTYRDLTTIVDLHAGVNVLVGLNGSGKSNIFSAIRFALGG 51 >gi|46121453|ref|XP_385281.1| hypothetical protein FG05105.1 [Gibberella zeae PH-1] Length = 1180 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ +AI ++ + Sbjct: 1 MRVIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITSMATVRAQ 60 Query: 86 SIKKRSIK 93 +I+ K Sbjct: 61 NIQDLIYK 68 >gi|323694888|ref|ZP_08109038.1| DNA replication and repair protein recF [Clostridium symbiosum WAL-14673] gi|323500978|gb|EGB16890.1| DNA replication and repair protein recF [Clostridium symbiosum WAL-14673] Length = 360 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ ++R + E+ I F ++ G N GK+++ E++ + R I Sbjct: 3 IESLELKNYRNYKELH-INFDPGTNVLYGDNAQGKTNILESVYVCATTKSHRGSKDREII 61 Query: 89 KRSIK 93 + + Sbjct: 62 EFGEE 66 >gi|323486746|ref|ZP_08092065.1| DNA replication and repair protein recF [Clostridium symbiosum WAL-14163] gi|323399885|gb|EGA92264.1| DNA replication and repair protein recF [Clostridium symbiosum WAL-14163] Length = 360 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ ++R + E+ I F ++ G N GK+++ E++ + R I Sbjct: 3 IESLELKNYRNYKELH-INFDPGTNVLYGDNAQGKTNILESVYVCATTKSHRGSKDREII 61 Query: 89 KRSIK 93 + + Sbjct: 62 EFGEE 66 >gi|218190000|gb|EEC72427.1| hypothetical protein OsI_05745 [Oryza sativa Indica Group] Length = 208 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVVEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|115444055|ref|NP_001045807.1| Os02g0133700 [Oryza sativa Japonica Group] gi|113535338|dbj|BAF07721.1| Os02g0133700 [Oryza sativa Japonica Group] Length = 343 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVVEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|46370592|gb|AAS90118.1| condensin subunit [Tetrahymena thermophila] Length = 1359 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEA 69 + L ++L ++LI K I + +F+ + Q I F T V G NG GKS+L E+ Sbjct: 34 SVLRQNLAGKSEQRLIVK--QIVLENFKSYQGRQVIGPFHKRFTSVVGPNGSGKSNLIES 91 Query: 70 IEWLFY 75 + ++F Sbjct: 92 LLFVFG 97 >gi|73969294|ref|XP_538328.2| PREDICTED: similar to SMC1 structural maintenance of chromosomes 1-like 2 [Canis familiaris] Length = 1235 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 3 RLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTA 54 >gi|229594500|ref|XP_001023403.3| SMC family, C-terminal domain containing protein [Tetrahymena thermophila] gi|225566824|gb|EAS03158.3| SMC family, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1359 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEA 69 + L ++L ++LI K I + +F+ + Q I F T V G NG GKS+L E+ Sbjct: 34 SVLRQNLAGKSEQRLIVK--QIVLENFKSYQGRQVIGPFHKRFTSVVGPNGSGKSNLIES 91 Query: 70 IEWLFY 75 + ++F Sbjct: 92 LLFVFG 97 >gi|229542312|ref|ZP_04431372.1| DNA replication and repair protein RecF [Bacillus coagulans 36D1] gi|229326732|gb|EEN92407.1| DNA replication and repair protein RecF [Bacillus coagulans 36D1] Length = 370 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++E+ ++R + E I F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYLQELELHNYRNY-ETLTIPFENKVNVILGENAQGKTNLMEAIYVLALAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|328863712|gb|EGG12811.1| hypothetical protein MELLADRAFT_32282 [Melampsora larici-populina 98AG31] Length = 743 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 31 DIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + + +E F+ + +V G+NG GKS+ AI +L Sbjct: 2 SLTIQGFKSYRDATIVEEFSPGVNVVVGRNGSGKSNFFSAIRFLL 46 >gi|312866766|ref|ZP_07726979.1| DNA replication and repair protein RecF [Streptococcus parasanguinis F0405] gi|311097549|gb|EFQ55780.1| DNA replication and repair protein RecF [Streptococcus parasanguinis F0405] Length = 364 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 1 MWLKQLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRNDRD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|296875531|ref|ZP_06899603.1| recombination protein F [Streptococcus parasanguinis ATCC 15912] gi|296433455|gb|EFH19230.1| recombination protein F [Streptococcus parasanguinis ATCC 15912] Length = 364 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 1 MWLKQLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRNDRD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|260946677|ref|XP_002617636.1| hypothetical protein CLUG_03080 [Clavispora lusitaniae ATCC 42720] gi|238849490|gb|EEQ38954.1| hypothetical protein CLUG_03080 [Clavispora lusitaniae ATCC 42720] Length = 1170 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + + + + G NG GKS++ +AI ++ + Sbjct: 1 MKVEELIIDGFKSYATRTVVTGWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|167759581|ref|ZP_02431708.1| hypothetical protein CLOSCI_01938 [Clostridium scindens ATCC 35704] gi|167662808|gb|EDS06938.1| hypothetical protein CLOSCI_01938 [Clostridium scindens ATCC 35704] Length = 363 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 K+ +++ +FR + ++ K+EF + I G N GK+++ EA+ + R D Sbjct: 1 MKIESLKLKNFRNY-DLLKLEFDEATNIFYGDNAQGKTNILEAVYLSGTTKSHRGAKDRD 59 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQL 109 IK ++ + + YQ+ Sbjct: 60 LIKFDQNESHIEAIVERNGINYQI 83 >gi|75908420|ref|YP_322716.1| hypothetical protein Ava_2201 [Anabaena variabilis ATCC 29413] gi|75702145|gb|ABA21821.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 690 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQK---IEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I++ +FR F I D + TI++G NG GK+SL A W+ Y Sbjct: 1 MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYE 55 >gi|225849062|ref|YP_002729226.1| DNA double-strand break repair Rad50 ATPase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643582|gb|ACN98632.1| putative DNA double-strand break repair Rad50 ATPase [Sulfurihydrogenibium azorense Az-Fu1] Length = 884 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F + ++EF+ +T + G+NG GK+S+ E I + +G + + D I Sbjct: 3 ITKLTLKNFLAH-DNTQVEFSPSGITAIIGENGSGKTSILEGIMFALFGKSSKGNQIDLI 61 Query: 88 K 88 K Sbjct: 62 K 62 >gi|326469805|gb|EGD93814.1| chromosome segregation protein [Trichophyton tonsurans CBS 112818] Length = 1199 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|323358747|ref|YP_004225143.1| ATPase [Microbacterium testaceum StLB037] gi|323275118|dbj|BAJ75263.1| ATPase [Microbacterium testaceum StLB037] Length = 1018 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 KL +E+ F F + Q ++F D + ++ G+ G GKSS+ + + + YG Sbjct: 1 MKLHRLELEGFGPFLDEQVVDFDAFADDGIFLITGRTGAGKSSVLDGVCYALYGGVPRYD 60 Query: 77 YTQRRKHGD 85 +RR D Sbjct: 61 GAERRLRSD 69 >gi|17232403|ref|NP_488951.1| hypothetical protein alr4911 [Nostoc sp. PCC 7120] gi|17134049|dbj|BAB76610.1| alr4911 [Nostoc sp. PCC 7120] Length = 690 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQK---IEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I++ +FR F I D + TI++G NG GK+SL A W+ Y Sbjct: 1 MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYE 55 >gi|328541940|ref|YP_004302049.1| SMC domain protein [polymorphum gilvum SL003B-26A1] gi|326411690|gb|ADZ68753.1| SMC domain protein [Polymorphum gilvum SL003B-26A1] Length = 817 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + KL + FRG I+F ++G NG GKS + +AIE+ G R G Sbjct: 1 MIKLETAHVEEFRGIR-KLDIDFGKGTFAISGPNGTGKSGVIDAIEFGLTGEIG-RLTGR 58 Query: 86 SIKKRSIKTPMP 97 K S+ P Sbjct: 59 GTKSLSVSEHGP 70 >gi|291535893|emb|CBL09005.1| hypothetical protein ROI_19580 [Roseburia intestinalis M50/1] Length = 797 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + IS F + Q I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MKPVSLTISAFGPYAGEQTIDFERLGSQGLFLITGDTGAGKTTIFDAITFALYGEASGDV 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RKADMFRSKY 70 >gi|218291097|ref|ZP_03495120.1| DNA replication and repair protein RecF [Alicyclobacillus acidocaldarius LAA1] gi|218238982|gb|EED06189.1| DNA replication and repair protein RecF [Alicyclobacillus acidocaldarius LAA1] Length = 371 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + + IE + + ++ G+NG GK++ EA+ + G + R Sbjct: 1 MDIRRVELIDFRNYAQAE-IELSPGVNVLVGENGQGKTNALEAMLLIAVGKSHRAHRDRD 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LIRWEQDRAR 69 >gi|116332685|ref|YP_794212.1| recombination protein F [Lactobacillus brevis ATCC 367] gi|122270619|sp|Q03UE1|RECF_LACBA RecName: Full=DNA replication and repair protein recF gi|116098032|gb|ABJ63181.1| DNA replication and repair protein RecF [Lactobacillus brevis ATCC 367] Length = 384 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + K+ F + ++ G+N GK++L EAI L + R + Sbjct: 1 MYLQELQLQQFRNYP-TAKLTFGQGINVLLGENAQGKTNLLEAIYVLALTRSHRTANDHD 59 Query: 87 IKKRSIKTPM 96 + KT Sbjct: 60 LVNWQAKTAK 69 >gi|309805927|ref|ZP_07699959.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 03V1-b] gi|308167703|gb|EFO69850.1| DNA replication and repair protein RecF [Lactobacillus iners LactinV 03V1-b] Length = 246 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L D+ + FR F + K+ F H+ I G+N GK++L EAI +L + R Sbjct: 1 MYLEDLTLKDFRNF-DRVKVNFDSHINIFIGKNAQGKTNLLEAIYFLALTKSHRTSVDKE 59 Query: 87 IKKRSIK 93 + K ++K Sbjct: 60 LIKFNMK 66 >gi|296812245|ref|XP_002846460.1| chromosome segregation protein sudA [Arthroderma otae CBS 113480] gi|238841716|gb|EEQ31378.1| chromosome segregation protein sudA [Arthroderma otae CBS 113480] Length = 1199 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|170052597|ref|XP_001862294.1| structural maintenance of chromosomes protein 1A [Culex quinquefasciatus] gi|167873449|gb|EDS36832.1| structural maintenance of chromosomes protein 1A [Culex quinquefasciatus] Length = 1227 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I + V G NG GKS+ +AI ++ T Sbjct: 7 LQFIEVENFKSYRGRVTIGPLKKFSAVIGPNGSGKSNFMDAISFVMGEKT 56 >gi|326485241|gb|EGE09251.1| chromosome segregation protein sudA [Trichophyton equinum CBS 127.97] Length = 1151 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|327303830|ref|XP_003236607.1| chromosome segregation protein [Trichophyton rubrum CBS 118892] gi|326461949|gb|EGD87402.1| chromosome segregation protein [Trichophyton rubrum CBS 118892] Length = 1199 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|325963793|ref|YP_004241699.1| exonuclease SbcC [Arthrobacter phenanthrenivorans Sphe3] gi|323469880|gb|ADX73565.1| exonuclease SbcC [Arthrobacter phenanthrenivorans Sphe3] Length = 1023 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + IS F F ++I+F L ++NG G GK+S+ +AI + YG + Sbjct: 1 MRIHRLIISGFGPFAGTEEIDFDRLSAHGLFLLNGPTGAGKTSVLDAICFALYG-SVPGA 59 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKY 107 D K+ P C++ Sbjct: 60 RQDG-KRLRSDHAEPAQEPAVTCEF 83 >gi|315051004|ref|XP_003174876.1| chromosome segregation protein sudA [Arthroderma gypseum CBS 118893] gi|311340191|gb|EFQ99393.1| chromosome segregation protein sudA [Arthroderma gypseum CBS 118893] Length = 1199 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|308483796|ref|XP_003104099.1| CRE-SMC-3 protein [Caenorhabditis remanei] gi|308258407|gb|EFP02360.1| CRE-SMC-3 protein [Caenorhabditis remanei] Length = 1232 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++ I+ FR + + + F+ +V G+NG GKS+ AI+++ Sbjct: 1 MKIKEVRINGFRSYKDNTHVSGFSPRSNVVVGRNGSGKSNFFHAIQFVL 49 >gi|307173964|gb|EFN64694.1| Structural maintenance of chromosomes protein 2 [Camponotus floridanus] Length = 1177 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ + + +I F + G NG GKS++ +AI ++ + Sbjct: 1 MYIKSMILEGFKSYGKRIEINNFDKEFNAITGFNGTGKSNILDAICFVLGITNLGQVRAT 60 Query: 86 SIKKRSIKT 94 S++ K+ Sbjct: 61 SLQDLVYKS 69 >gi|294496455|ref|YP_003542948.1| SMC domain protein [Methanohalophilus mahii DSM 5219] gi|292667454|gb|ADE37303.1| SMC domain protein [Methanohalophilus mahii DSM 5219] Length = 889 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ + R + +++ I+F D +T+V+G NG GKSSL EA +G R D Sbjct: 1 MRFKRLKVKNIRSYNDLE-IDFNDGVTVVSGVNGSGKSSLLEACFVGLFG--HRGIPKDF 57 Query: 87 I 87 + Sbjct: 58 V 58 >gi|148544276|ref|YP_001271646.1| AAA ATPase [Lactobacillus reuteri DSM 20016] gi|184153654|ref|YP_001841995.1| hypothetical protein LAR_0999 [Lactobacillus reuteri JCM 1112] gi|227364993|ref|ZP_03849033.1| AAA ATPase [Lactobacillus reuteri MM2-3] gi|325681695|ref|ZP_08161215.1| AAA ATPase [Lactobacillus reuteri MM4-1A] gi|148531310|gb|ABQ83309.1| AAA ATPase [Lactobacillus reuteri DSM 20016] gi|183224998|dbj|BAG25515.1| hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227069963|gb|EEI08346.1| AAA ATPase [Lactobacillus reuteri MM2-3] gi|324979007|gb|EGC15954.1| AAA ATPase [Lactobacillus reuteri MM4-1A] Length = 537 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 30/52 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L ++ + +F+ F +QKI F + I+ G NG GK+++ +A+ + G + Sbjct: 1 MYLNELYLYNFKSFKGLQKITFNRNKNILVGNNGVGKTTVIQALRLILKGSS 52 >gi|325261413|ref|ZP_08128151.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] gi|324032867|gb|EGB94144.1| putative RecF/RecN/SMC N domain protein [Clostridium sp. D5] Length = 884 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +S F + ++++I+F L ++ G G GK+++ +AI + Y T + Sbjct: 1 MRPVKLTMSAFGSYADVEEIDFTKIQHGLFLITGDTGAGKTTIFDAITYALYDKTSGGRR 60 Query: 84 GDSIKKRSIKTP 95 ++ + + Sbjct: 61 DGNMMRSQYASE 72 >gi|302508948|ref|XP_003016434.1| hypothetical protein ARB_04723 [Arthroderma benhamiae CBS 112371] gi|291180004|gb|EFE35789.1| hypothetical protein ARB_04723 [Arthroderma benhamiae CBS 112371] Length = 1199 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|166366434|ref|YP_001658707.1| hypothetical protein MAE_36930 [Microcystis aeruginosa NIES-843] gi|166088807|dbj|BAG03515.1| hypothetical protein MAE_36930 [Microcystis aeruginosa NIES-843] Length = 690 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I++ +FR F +I + + T++ G NG GK+++ A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGKTPEIHLAASSRNTTVIYGNNGAGKTTILNACTWVLYE 54 >gi|310780414|ref|YP_003968746.1| SMC domain protein [Ilyobacter polytropus DSM 2926] gi|309749737|gb|ADO84398.1| SMC domain protein [Ilyobacter polytropus DSM 2926] Length = 605 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I + +FRG+ +I+ I + ++ G+N GKS++ EA+E F + + GD Sbjct: 1 MKLKKIILKNFRGYKDIE-IPIEKNFNVIVGKNDVGKSTIMEAMEIFFNSNSIKADLGDY 59 Query: 87 IKKRSIKT 94 S K+ Sbjct: 60 NVLASEKS 67 >gi|225568889|ref|ZP_03777914.1| hypothetical protein CLOHYLEM_04968 [Clostridium hylemonae DSM 15053] gi|225162388|gb|EEG75007.1| hypothetical protein CLOHYLEM_04968 [Clostridium hylemonae DSM 15053] Length = 1053 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +S F + +++F + ++ G G GK+++ +A+ + Y T + Sbjct: 1 MRPIKLVMSAFGSYAGRTELDFTRVQSGIFLITGDTGAGKTTIFDAVTYALYDQTSGGRR 60 Query: 84 GDSIKKRSIKTP 95 S+ + + Sbjct: 61 DGSMMRSQYASE 72 >gi|195144940|ref|XP_002013454.1| GL23399 [Drosophila persimilis] gi|194102397|gb|EDW24440.1| GL23399 [Drosophila persimilis] Length = 1235 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LESIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|220908912|ref|YP_002484223.1| exonuclease SbcC [Cyanothece sp. PCC 7425] gi|219865523|gb|ACL45862.1| exonuclease SbcC [Cyanothece sp. PCC 7425] Length = 1003 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H+ + G NG GKSSL EAI W +G ++ D I Sbjct: 4 LRLTLKNFLSYREAT-LDFSGLHVACICGANGAGKSSLLEAIAWAIWGESRAGSEDDLI 61 >gi|331220243|ref|XP_003322797.1| condensin subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301787|gb|EFP78378.1| condensin subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1094 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++ + F+ + I F V G NG GKS++ +AI ++ + Sbjct: 1 MHIVELILDGFKSYPVRTTISGFDPSFNAVTGLNGSGKSNILDAICFVLGITNLSAVRAN 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|295108630|emb|CBL22583.1| DNA replication and repair protein RecF [Ruminococcus obeum A2-162] Length = 363 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ ++R + + +++F I G N GK+++ E++ + R Sbjct: 1 MYIKSLELKNYRNY-QNLQLDFDKGTNIFYGDNAQGKTNILESVYLCGTTKSHRGSKDKE 59 Query: 87 IKKRSIK 93 I + + Sbjct: 60 IIRFGEE 66 >gi|304316838|ref|YP_003851983.1| SMC domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778340|gb|ADL68899.1| SMC domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 853 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY-----TQRRKHG 84 + + +F ++E + ++F H+ + G+NG GKS+L +AI W +G + R Sbjct: 5 KLTLKNFMSYSEHEVMDFTRFHVAAIVGKNGNGKSALWDAITWCIWGRARGLDSAGRGSD 64 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQL 109 D I+ + + + + KY++ Sbjct: 65 DLIRIGADEMEVEFIFKINNTKYRI 89 >gi|23097459|ref|NP_690925.1| recombination protein F [Oceanobacillus iheyensis HTE831] gi|51316469|sp|Q8EU85|RECF_OCEIH RecName: Full=DNA replication and repair protein recF gi|22775682|dbj|BAC11960.1| DNA repair and genetic recombination [Oceanobacillus iheyensis HTE831] Length = 369 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 11/85 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 + +E++++R + + +I F D + ++ G+N GK++L EAI L + + R Sbjct: 1 MHIEKLELTNYRNY-DQLEIAFDDQINVIIGENAQGKTNLMEAIYVLSFARSHRTPREKE 59 Query: 84 -----GDSIKKRSIKTPMPMCMAVP 103 D K T ++P Sbjct: 60 LIQWDKDYAKIEGRITKR--NQSIP 82 >gi|67539458|ref|XP_663503.1| hypothetical protein AN5899.2 [Aspergillus nidulans FGSC A4] gi|40738572|gb|EAA57762.1| hypothetical protein AN5899.2 [Aspergillus nidulans FGSC A4] gi|259479933|tpe|CBF70609.1| TPA: Condensin subunit [Source:UniProtKB/TrEMBL;Acc:Q8J150] [Aspergillus nidulans FGSC A4] Length = 1179 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|119510145|ref|ZP_01629284.1| Exonuclease SbcC [Nodularia spumigena CCY9414] gi|119465206|gb|EAW46104.1| Exonuclease SbcC [Nodularia spumigena CCY9414] Length = 1008 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 5 QLILKNFLSYRDAT-LDFRGLHTACICGSNGAGKSSLLEAITWAIWGQSRAGVEDDVIHS 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 + + + + KY++ Sbjct: 64 GAKEVRVDYVFQCNQQKYRV 83 >gi|328848556|gb|EGF97764.1| hypothetical protein MELLADRAFT_84477 [Melampsora larici-populina 98AG31] Length = 1233 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 8/74 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA-------IEWLFYGYTQ 79 L IEI +F+ + Q I + T V G NG GKS+L +A I ++ + Sbjct: 1 MPLHSIEIVNFKSYKGTQTIGPFKNFTAVIGPNGAGKSNLMDAQSHLLVRISFVLGVRSG 60 Query: 80 RRKHGDSIKKRSIK 93 + ++ K Sbjct: 61 Q-LRSTQLRDLIYK 73 >gi|221130377|ref|XP_002165777.1| PREDICTED: similar to SMC4 protein, partial [Hydra magnipapillata] Length = 190 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + IE +F+ + Q + F + T + G+NG GKS++ +A+ ++F +Q+ Sbjct: 45 ITHIENINFKSYAGKQVLGPFHKNFTSIVGRNGSGKSNVIDAMLFVFGYRSQK 97 >gi|254435753|ref|ZP_05049260.1| hypothetical protein NOC27_2816 [Nitrosococcus oceani AFC27] gi|207088864|gb|EDZ66136.1| hypothetical protein NOC27_2816 [Nitrosococcus oceani AFC27] Length = 168 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + + +FR ++ ++F D+ ++ G+N GKS++ EA+E F T + + GD Sbjct: 1 MKISSLTLKNFRAYS-NVFVKFDDNFNVIIGRNDVGKSTILEALEIFFNNETVKMEIGD 58 >gi|198452495|ref|XP_001358804.2| GA19328 [Drosophila pseudoobscura pseudoobscura] gi|198131954|gb|EAL27947.2| GA19328 [Drosophila pseudoobscura pseudoobscura] Length = 1238 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LESIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|186686202|ref|YP_001869398.1| recombination protein F [Nostoc punctiforme PCC 73102] gi|226737816|sp|B2IVZ4|RECF_NOSP7 RecName: Full=DNA replication and repair protein recF gi|186468654|gb|ACC84455.1| DNA replication and repair protein RecF [Nostoc punctiforme PCC 73102] Length = 374 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + QK+EF TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLNLRQFRNYQD-QKVEFTAAKTILVGNNAQGKSNLLEAVELLATLRSHRMTRDRD 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVQEG 64 >gi|302309004|ref|NP_986184.2| AFR637Wp [Ashbya gossypii ATCC 10895] gi|299790898|gb|AAS54008.2| AFR637Wp [Ashbya gossypii ATCC 10895] Length = 1296 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I R F + + I+F LT++ G NG GK+++ E +++ G Sbjct: 4 IHNLSIQGIRSFDARDKEVIKFGKPLTLIVGANGCGKTTIIECLKYATTG 53 >gi|291536987|emb|CBL10099.1| recF protein [Roseburia intestinalis M50/1] Length = 368 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+++FR + E +I F + I+ G N GK+++ EA + + + Sbjct: 3 IQSIELNNFRNY-ENLQISFDEGTNILFGDNAQGKTNILEAAYLSGTTKSHKGSKDKEMI 61 Query: 89 KRSIKTPMPMCMAVPRCK-YQL 109 + M + K YQ+ Sbjct: 62 RFGTNEAHLRTMVLKNGKQYQI 83 >gi|159028031|emb|CAO87991.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 690 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I++ +FR F +I + + T++ G NG GK+++ A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGKTPEIHLAASSRNTTVIYGNNGAGKTTILNACTWVLYE 54 >gi|328950833|ref|YP_004368168.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451157|gb|AEB12058.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] Length = 905 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F + E Q+I F D L + G G GKS+L +AI + YG T R Sbjct: 1 MRPLRLVVAGFGAYREPQEIPFDDVELFAITGPTGSGKSTLLDAICFALYGKTPRAG 57 >gi|302680923|ref|XP_003030143.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8] gi|300103834|gb|EFI95240.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8] Length = 1297 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R F + Q IEF + +T++ G NG GK+++ E +++ G G Sbjct: 4 LEKLAIRGIRSFDDKQISVIEFFNPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTRG 61 >gi|255083520|ref|XP_002504746.1| condensin complex component [Micromonas sp. RCC299] gi|226520014|gb|ACO66004.1| condensin complex component [Micromonas sp. RCC299] Length = 1170 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + + + F + G NG GKS++ ++I ++ + Sbjct: 1 MYVEEVCIDGFKSYAQRTVVPAFDPLFNAITGLNGSGKSNILDSICFVLGITNLSQVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|46981263|gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group] gi|218197032|gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gi|222632094|gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] Length = 1241 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q+I F + V G NG GKS++ +A+ ++F G ++ Sbjct: 23 IKEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 77 >gi|168187274|ref|ZP_02621909.1| DNA replication and repair protein RecF [Clostridium botulinum C str. Eklund] gi|169294762|gb|EDS76895.1| DNA replication and repair protein RecF [Clostridium botulinum C str. Eklund] Length = 361 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ +FR + E + + + G N GK+++ E+I + G + R Sbjct: 1 MYIKNLELINFRNY-ERLSLNLHSGINVFIGDNAQGKTNILESIYYCSIGKSHRTNKDKE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 LIKWGAR 66 >gi|154246244|ref|YP_001417202.1| SMC domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160329|gb|ABS67545.1| SMC domain protein [Xanthobacter autotrophicus Py2] Length = 880 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHG 84 ++ + I +FR F +E FAD L +V N GKS++ +A+ + ++ + Sbjct: 1 MRIRRLTIENFRKFRSPVVLEGFADGLNLVCEPNETGKSTVLDALRAALFERHSAKSDRI 60 Query: 85 DSIKKRSIKTPMPMCMA 101 S + + + + +A Sbjct: 61 RSFRPQGDEVAPTVDLA 77 >gi|313896202|ref|ZP_07829755.1| exonuclease SbcCD, C subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975001|gb|EFR40463.1| exonuclease SbcCD, C subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 1026 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 10/93 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + + F + E Q ++F +++G G GK+++ +AI + YG + Sbjct: 1 MRPLKLRMQAFGSYVEEQILDFETALSGAPFVLIHGATGAGKTTILDAIVFALYGESSGD 60 Query: 82 KHGDSIKKRSIK-----TPMPMCMAVPRCKYQL 109 ++ + S T + A+ R +Y++ Sbjct: 61 VREGAMLRSSAAPPERVTEVEYTFALGRRRYRV 93 >gi|258564324|ref|XP_002582907.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237908414|gb|EEP82815.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1261 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ +E+ +F+ + + D T + G NG GKS+ +AI ++ G Sbjct: 3 KLIRLELFNFKSYKGHHTLLLGDAYFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTH 61 Query: 87 IKKRSIK 93 ++ + Sbjct: 62 LRDLVYR 68 >gi|227831833|ref|YP_002833540.1| DNA replication and repair protein [Corynebacterium aurimucosum ATCC 700975] gi|262183097|ref|ZP_06042518.1| recombination protein F [Corynebacterium aurimucosum ATCC 700975] gi|254790471|sp|C3PE74|RECF_CORA7 RecName: Full=DNA replication and repair protein recF gi|227452849|gb|ACP31602.1| DNA replication and repair protein [Corynebacterium aurimucosum ATCC 700975] Length = 392 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ + +T+ G+NG+GK+++ EAI + + + R H Sbjct: 1 MYIRDLDVRDFRSWPELT-LRLKPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVAHDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ AV Sbjct: 60 LVRQGAHNARISATAV 75 >gi|291538391|emb|CBL11502.1| hypothetical protein RO1_08020 [Roseburia intestinalis XB6B4] Length = 1305 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + IS F + Q I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MKPVSLTISAFGPYAGEQTIDFERLGSQGLFLITGDTGAGKTTIFDAITFALYGEASGDV 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RKADMFRSKY 70 >gi|291165886|gb|EFE27933.1| DNA replication and repair protein RecF [Filifactor alocis ATCC 35896] Length = 355 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + + +FR + E ++ F + + GQNG GK+++ EAI G + R Sbjct: 1 MKIHQLTLKNFRNY-EQLELLFKEGANVFVGQNGQGKTNVLEAISLFSVGRSFRTVRDLD 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MVAFGQD 66 >gi|271961614|ref|YP_003335810.1| recombinational DNA repair ATPase (RecF pathway)-like protein [Streptosporangium roseum DSM 43021] gi|270504789|gb|ACZ83067.1| Recombinational DNA repair ATPase (RecF pathway)- like protein [Streptosporangium roseum DSM 43021] Length = 390 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++ FR + + + +T G NG GK++L EA+ ++ + R Sbjct: 1 MHVANLSLTDFRSY-DTVDLGLEPGVTAFVGPNGQGKTNLVEALGYVATQSSHRVATDGP 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LVRQG 64 >gi|156094454|ref|XP_001613264.1| chromosome condensation protein [Plasmodium vivax SaI-1] gi|148802138|gb|EDL43537.1| chromosome condensation protein, putative [Plasmodium vivax] Length = 1455 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ ++ ++ I F + + G NG GKS++ +A+ ++F G ++ + + Sbjct: 58 IDRLVLENFKSYSGVKVIGPFYKKFSCIVGPNGSGKSNIIDAMLFVF-GRRAKKIRQNKL 116 Query: 88 KKRSIKTPMPM 98 + M Sbjct: 117 SDLIHSSKHSM 127 >gi|119510071|ref|ZP_01629211.1| hypothetical protein N9414_19652 [Nodularia spumigena CCY9414] gi|119465258|gb|EAW46155.1| hypothetical protein N9414_19652 [Nodularia spumigena CCY9414] Length = 689 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I++ +FR F F + TI++G NG GK+SL A W+ Y Sbjct: 1 MKLTSIKLCNFRSFYGTTPEIFLAVGDTLNTTIIHGNNGSGKTSLLNAFTWVLYE 55 >gi|71004440|ref|XP_756886.1| hypothetical protein UM00739.1 [Ustilago maydis 521] gi|46095611|gb|EAK80844.1| hypothetical protein UM00739.1 [Ustilago maydis 521] Length = 1169 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +F I+F L V G+NG GKS++ A+ G T G S+K Sbjct: 128 VEKIELRNFMCHA-NFSIQFGPKLNFVMGRNGSGKSTILTALMIALGGKTSSTNRGSSLK 186 Query: 89 KRSIKTPMPMCMAV 102 K + V Sbjct: 187 DLVKKGESSATITV 200 >gi|307213364|gb|EFN88816.1| Structural maintenance of chromosomes protein 1A [Harpegnathos saltator] Length = 1229 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I T V G NG GKS+ +AI ++ T Sbjct: 5 LKHIEVDNFKSYKGKLVIGPLKCFTAVVGPNGSGKSNFMDAISFVMGEKT 54 >gi|146300448|ref|YP_001195039.1| AAA ATPase [Flavobacterium johnsoniae UW101] gi|146154866|gb|ABQ05720.1| AAA ATPase [Flavobacterium johnsoniae UW101] Length = 410 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 28/48 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ ++ I +FR + + EF ++T++ G NG GK+++ +A+ Sbjct: 1 MRIRELSIKNFRALEDDRHFEFHSNITLIAGVNGKGKTAILDALVLAL 48 >gi|257437731|ref|ZP_05613486.1| DNA replication and repair protein RecF [Faecalibacterium prausnitzii A2-165] gi|257200038|gb|EEU98322.1| DNA replication and repair protein RecF [Faecalibacterium prausnitzii A2-165] Length = 373 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E++++R LT++ G NG GK++L EAI L G + R Sbjct: 1 MRLLSLEVTNYRNIASASLTP-GRELTVICGNNGQGKTNLLEAIWLLTGGKSFRGGKDAE 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LVRRG 64 >gi|258510298|ref|YP_003183732.1| SMC domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477024|gb|ACV57343.1| SMC domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1223 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + I R + E Q+I+F L + G G GKS++ +AI +G R Sbjct: 1 MRPVRLIIQGLRSYRERQEIDFQALTEHGLFGIFGPTGSGKSTILDAITLALFGSATRAS 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|307111145|gb|EFN59380.1| hypothetical protein CHLNCDRAFT_13527 [Chlorella variabilis] Length = 169 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I F+ + + +E F++ + V G NG GKS+ AI ++ Sbjct: 1 LSQVVIEGFKSYKDQTILEPFSNRINCVVGANGSGKSNFFHAIRFVLD 48 >gi|154503803|ref|ZP_02040863.1| hypothetical protein RUMGNA_01628 [Ruminococcus gnavus ATCC 29149] gi|153795903|gb|EDN78323.1| hypothetical protein RUMGNA_01628 [Ruminococcus gnavus ATCC 29149] Length = 886 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K + + +S F + +++I+F + ++ G G GK+++ +A+ + YG T K Sbjct: 1 MKPIKLTMSAFGSYRGVERIDFTGIQNGCFLITGDTGAGKTTIFDAVTYALYGRTSGGKR 60 Query: 84 GDSIKKRSI 92 ++ + Sbjct: 61 DGNMMRSQY 69 >gi|21262152|emb|CAD32690.1| SMC4 protein [Oryza sativa] Length = 1236 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q+I F + V G NG GKS++ +A+ ++F G ++ Sbjct: 23 IKEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 77 >gi|328770039|gb|EGF80081.1| hypothetical protein BATDEDRAFT_88502 [Batrachochytrium dendrobatidis JAM81] Length = 1192 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I F+ + E IE F+ V G+NG GKS+ AI ++ Sbjct: 1 MYIKQIVIQGFKSYKEQTVIEPFSPAHNSVVGRNGSGKSNFFWAIRFVLG 50 >gi|15644384|ref|NP_229436.1| hypothetical protein TM1636 [Thermotoga maritima MSB8] gi|18203590|sp|Q9X1X1|RAD50_THEMA RecName: Full=Probable DNA double-strand break repair rad50 ATPase gi|4982209|gb|AAD36703.1|AE001806_13 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 852 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 + + + +F G + IEF +T+V G NG GKSSL EAI + +G R + D Sbjct: 1 MRPERLTVRNFLGL-KNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYD 59 Query: 86 SIKKRSIK 93 + + ++ Sbjct: 60 YVNRNAVD 67 >gi|332667472|ref|YP_004450260.1| DNA replication and repair protein recF [Haliscomenobacter hydrossis DSM 1100] gi|332336286|gb|AEE53387.1| DNA replication and repair protein recF [Haliscomenobacter hydrossis DSM 1100] Length = 365 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I +++F+ + E QK++ + L + G NG GK++L +AI +L + ++ Sbjct: 1 MYLERIALANFKNY-ENQKLDCSPRLNCLVGNNGMGKTNLLDAIYYLCMAKSHFNLTDNA 59 Query: 87 IKK 89 I + Sbjct: 60 IAR 62 >gi|323508294|emb|CBQ68165.1| related to DNA repair protein rad18 [Sporisorium reilianum] Length = 1177 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +F I+F L V G+NG GKS++ A+ G T G S+K Sbjct: 137 VEKIELRNFMCHA-NFSIDFGSKLNFVMGRNGSGKSTILTALMIALGGKTSSTNRGSSLK 195 Query: 89 KRSIKTPMPMCMAV 102 K + V Sbjct: 196 DLVKKGEHSATITV 209 >gi|309359903|emb|CAP32031.2| CBR-SMC-3 protein [Caenorhabditis briggsae AF16] Length = 1241 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++ I+ FR + + + F+ +V G+NG GKS+ AI+++ Sbjct: 1 MKIKEVRINGFRSYKDNTHVSGFSPRSNVVVGRNGSGKSNFFHAIQFVL 49 >gi|291539809|emb|CBL12920.1| recF protein [Roseburia intestinalis XB6B4] Length = 368 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+++FR + E +I F + I+ G N GK+++ EA + + + Sbjct: 3 IQSIELNNFRNY-ENLQISFDEGTNILFGDNAQGKTNILEAAYLSGTTKSHKGSKDKEMI 61 Query: 89 KRSIKTPMPMCMAVPRCK-YQL 109 + M + K YQ+ Sbjct: 62 RFGTNEAHLRTMVLKNGKQYQI 83 >gi|240145739|ref|ZP_04744340.1| DNA replication and repair protein RecF [Roseburia intestinalis L1-82] gi|257202155|gb|EEV00440.1| DNA replication and repair protein RecF [Roseburia intestinalis L1-82] Length = 368 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+++FR + E I F + I+ G N GK+++ EA + + + Sbjct: 3 IQSIELNNFRNY-ENLHISFDEGTNILFGDNAQGKTNILEAAYLSGTTKSHKGSKDKEMI 61 Query: 89 KRSIKTPMPMCMAVPRCK-YQL 109 + M + K YQ+ Sbjct: 62 RFGTNEAHLRTMVLKNGKQYQI 83 >gi|145231946|ref|XP_001399441.1| structural maintenance of chromosomes protein 2 [Aspergillus niger CBS 513.88] gi|134056350|emb|CAK47585.1| unnamed protein product [Aspergillus niger] Length = 1179 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|134045282|ref|YP_001096768.1| SMC domain-containing protein [Methanococcus maripaludis C5] gi|132662907|gb|ABO34553.1| SMC domain protein [Methanococcus maripaludis C5] Length = 993 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++ +FR I F +T + GQNG GKSS+ +A+ + + +++ Sbjct: 3 IKNIKMENFRSHR-NTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENLM 61 Query: 89 KRSI 92 ++ Sbjct: 62 QQGS 65 >gi|262281653|ref|ZP_06059422.1| recombination protein F [Streptococcus sp. 2_1_36FAA] gi|262262107|gb|EEY80804.1| recombination protein F [Streptococcus sp. 2_1_36FAA] Length = 361 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 L + + HFR + + + I F L + GQN GK+++ E+I +L + R R D Sbjct: 1 MWLKSLTLKHFRNYQDAE-INFHSGLNVFLGQNAQGKTNILESIYFLALTRSHRTRSDKD 59 Query: 86 SIKKRSIKTP 95 I + Sbjct: 60 FIHFQEKDLK 69 >gi|151945253|gb|EDN63502.1| structural maintenance of chromosomes [Saccharomyces cerevisiae YJM789] Length = 1230 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H ++ G NG GKS+ AI ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVL 49 >gi|6322387|ref|NP_012461.1| Smc3p [Saccharomyces cerevisiae S288c] gi|1352989|sp|P47037|SMC3_YEAST RecName: Full=Structural maintenance of chromosomes protein 3; AltName: Full=DA-box protein SMC3 gi|895899|emb|CAA61313.1| hypothetical protein [Saccharomyces cerevisiae] gi|1008231|emb|CAA89366.1| SMC3 [Saccharomyces cerevisiae] gi|2570100|emb|CAA74655.1| Smc3 [Saccharomyces cerevisiae] gi|285812827|tpg|DAA08725.1| TPA: Smc3p [Saccharomyces cerevisiae S288c] Length = 1230 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H ++ G NG GKS+ AI ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVL 49 >gi|108802860|ref|YP_642797.1| DNA replication and repair protein RecF [Rubrobacter xylanophilus DSM 9941] gi|108764103|gb|ABG02985.1| DNA replication and repair protein RecF [Rubrobacter xylanophilus DSM 9941] Length = 374 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +FR + + + L ++ G+N GK++L EA+ ++ G + R + + Sbjct: 5 IRAIRLVNFRNYAGATAL-LSPGLNVLVGENAQGKTNLLEALAFVVSGSSPRTPNDSEVV 63 Query: 89 K 89 + Sbjct: 64 R 64 >gi|67536854|ref|XP_662201.1| hypothetical protein AN4597.2 [Aspergillus nidulans FGSC A4] gi|40741209|gb|EAA60399.1| hypothetical protein AN4597.2 [Aspergillus nidulans FGSC A4] gi|259482571|tpe|CBF77179.1| TPA: nuclear condensin complex subunit Smc4, putative (AFU_orthologue; AFUA_2G02170) [Aspergillus nidulans FGSC A4] Length = 1476 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 247 ITTLVLNNFKSYAGKQVVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQG 303 >gi|190409425|gb|EDV12690.1| structural maintenance of chromosome 3 [Saccharomyces cerevisiae RM11-1a] Length = 1230 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H ++ G NG GKS+ AI ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVL 49 >gi|153007350|ref|YP_001368565.1| recombination protein F [Ochrobactrum anthropi ATCC 49188] gi|151559238|gb|ABS12736.1| DNA replication and repair protein RecF [Ochrobactrum anthropi ATCC 49188] Length = 387 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + ++ G+NG GK++L EAI +L G RR D Sbjct: 14 VSIRRLKLVNFRNYAEL-SLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDD 72 Query: 87 IKKRSI 92 + + + Sbjct: 73 VARANS 78 >gi|295101861|emb|CBK99406.1| recF protein [Faecalibacterium prausnitzii L2-6] Length = 373 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL +E+ ++R LT++ G NG GK++L EAI L G + R Sbjct: 1 MRLLSLEVENYRNIASASLTP-GRELTVICGNNGQGKTNLLEAIWLLTGGKSFRGGKDAE 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LVRRG 64 >gi|302309923|ref|XP_451012.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|199424766|emb|CAH02600.2| KLLA0A00286p [Kluyveromyces lactis] Length = 1224 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + IS F+ + +E F+ H +V G NG GKS+ AI ++ K Sbjct: 1 MVHIKTVIISGFKTYKNRTVVENFSPHHNVVVGSNGSGKSNFFAAIRFVLSEENSNLKRE 60 Query: 85 D 85 D Sbjct: 61 D 61 >gi|74139066|dbj|BAE38432.1| unnamed protein product [Mus musculus] Length = 171 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|320591091|gb|EFX03530.1| gp46 recombination endonuclease subunit [Grosmannia clavigera kw1407] Length = 1143 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWL 73 TS + KL + I++F G +++ L ++G+NG GKS++ EA+ W Sbjct: 464 TSLATHIFVAKLRSLTITNFLGIQGRLRLDLGRNVPRGLVFLSGENGSGKSTIIEAMTWC 523 Query: 74 FYGYTQRRK 82 +G R Sbjct: 524 QFGRCIRGG 532 >gi|309799251|ref|ZP_07693499.1| DNA replication and repair protein RecF [Streptococcus infantis SK1302] gi|308117096|gb|EFO54524.1| DNA replication and repair protein RecF [Streptococcus infantis SK1302] Length = 214 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + + +IEF L + G+N GK++L E+I +L + R K + Sbjct: 1 MWLKKLSIKQFRNYQD-TEIEFNPKLNVFVGRNAQGKTNLLESIYFLALTRSHRTKTDKN 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIQFEEQQ 67 >gi|289168901|ref|YP_003447170.1| recombination protein recF [Streptococcus mitis B6] gi|288908468|emb|CBJ23310.1| recombination protein recF [Streptococcus mitis B6] Length = 365 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQNLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|254516512|ref|ZP_05128571.1| putative RecF/RecN/SMC N terminal domain [gamma proteobacterium NOR5-3] gi|219674935|gb|EED31302.1| putative RecF/RecN/SMC N terminal domain [gamma proteobacterium NOR5-3] Length = 673 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ + +FR F +EF+ ++T+V+G+NG GK+++ AI W F+ Sbjct: 1 MMLKNLMMVNFRQFYGENYLEFSTDRRKNITLVHGENGVGKTTILNAILWCFF 53 >gi|116326763|ref|YP_803300.1| hypothetical protein TNAV2c_gp077 [Trichoplusia ni ascovirus 2c] gi|102231771|gb|ABF70594.1| hypothetical protein [Trichoplusia ni ascovirus 2c] Length = 937 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F+ F + F D +T+++ +G GKS++ E+I + YG H D+ K Sbjct: 2 KLVLENFKSFKNRTEFSFPDYGVTLLSAPSGCGKSTIIESIMFAIYGGNAP-GHFDNPKT 60 Query: 90 RSIKTPMPM-CMAVPRCK 106 ++ + + M + + R + Sbjct: 61 KTTRVVLDMPNITIIRSR 78 >gi|299756665|ref|XP_002912232.1| smc4 chromosome structural maintenance 4-like protein [Coprinopsis cinerea okayama7#130] gi|298411778|gb|EFI28738.1| smc4 chromosome structural maintenance 4-like protein [Coprinopsis cinerea okayama7#130] Length = 569 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q+I F + + G NG GKS+ +A+ ++F + + G Sbjct: 302 ISKMALVNFKSYAGRQEIGPFHKSFSAIVGPNGSGKSNTIDALLFVFGYRASKMRQG 358 >gi|290771148|emb|CAY80706.2| Smc3p [Saccharomyces cerevisiae EC1118] Length = 1230 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H ++ G NG GKS+ AI ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVL 49 >gi|154416624|ref|XP_001581334.1| SMC flexible hinge domain protein [Trichomonas vaginalis G3] gi|121915560|gb|EAY20348.1| SMC flexible hinge domain protein, putative [Trichomonas vaginalis G3] Length = 1135 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + IS F+ F + F+ + G NG GK++L +AIE++ Sbjct: 1 MNIKKVVISGFKAFADTTIFGPFSPGKNCILGLNGSGKTTLFQAIEFVLLEN 52 >gi|18977539|ref|NP_578896.1| chromosome segregation protein [Pyrococcus furiosus DSM 3638] gi|17380251|sp|P58301|RAD50_PYRFU RecName: Full=DNA double-strand break repair rad50 ATPase gi|18893248|gb|AAL81291.1| smc-like protein [Pyrococcus furiosus DSM 3638] Length = 882 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + + +FR ++ +EF + + ++ GQNG GKSSL +AI Sbjct: 1 MKLERVTVKNFRSHSD-TVVEFKEGINLIIGQNGSGKSSLLDAI 43 >gi|322390514|ref|ZP_08064032.1| recombination protein F [Streptococcus parasanguinis ATCC 903] gi|321142788|gb|EFX38248.1| recombination protein F [Streptococcus parasanguinis ATCC 903] Length = 364 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I HFR + E++ +EF L I GQN GK+++ E+I +L + R ++ Sbjct: 1 MWLKHLSIQHFRNYQELE-VEFHPGLNIFLGQNAQGKTNILESIYFLALTRSHRTRNDRD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|256271712|gb|EEU06751.1| Smc3p [Saccharomyces cerevisiae JAY291] Length = 1230 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H ++ G NG GKS+ AI ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVL 49 >gi|229918298|ref|YP_002886944.1| SMC domain protein [Exiguobacterium sp. AT1b] gi|229469727|gb|ACQ71499.1| SMC domain protein [Exiguobacterium sp. AT1b] Length = 672 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Query: 29 LLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I +FR + IEF + ++T+++G+NG GK++L A+ W FYG + + Sbjct: 3 LKQVIIENFRQYYGQNTIEFAHGSSKNVTVIHGENGSGKTALLTALIWGFYGRELKLPNP 62 Query: 85 DSI 87 +SI Sbjct: 63 ESI 65 >gi|170079221|ref|YP_001735859.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. PCC 7002] gi|169886890|gb|ACB00604.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. PCC 7002] Length = 1007 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + + ++F H + G NG GKSSL EA+ W+ +G ++ D I Sbjct: 4 LKLTLKNFLSYRDAV-LDFTGFHTACICGPNGAGKSSLLEAVTWVIWGKSRTSSADDVI 61 >gi|255074335|ref|XP_002500842.1| condensin complex component [Micromonas sp. RCC299] gi|226516105|gb|ACO62100.1| condensin complex component [Micromonas sp. RCC299] Length = 1259 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F G ++ Sbjct: 17 IKKMVLENFKSYAGAQHVGPFHKSFSSVVGPNGSGKSNVIDAMLFVF-GKRAKQLR 71 >gi|303280275|ref|XP_003059430.1| condensin complex component [Micromonas pusilla CCMP1545] gi|226459266|gb|EEH56562.1| condensin complex component [Micromonas pusilla CCMP1545] Length = 1265 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F G ++ Sbjct: 17 IKKMVLENFKSYAGAQHVGPFHKSFSSVVGPNGSGKSNVIDAMLFVF-GKRAKQLR 71 >gi|15678568|ref|NP_275683.1| intracellular protein transport protein [Methanothermobacter thermautotrophicus str. Delta H] gi|18201989|sp|O26640|RAD50_METTH RecName: Full=DNA double-strand break repair rad50 ATPase gi|2621615|gb|AAB85046.1| intracellular protein transport protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 837 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ + R + E ++EF D +T+ G G GK++L A+E+ +G +R GDS+ Sbjct: 3 IRSLELKNIRSY-ESGRVEFDDGVTLFEGDIGSGKTTLLLAVEFALFGLGDQR--GDSLL 59 Query: 89 KRSIKT 94 + + + Sbjct: 60 RATSNS 65 >gi|330958612|gb|EGH58872.1| SMC domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1011 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L I +S+ R F+ IE + TI+ NG GK++ EAIE G R Sbjct: 3 QLKSITLSNIRRFSADTTIELSQGATILLAPNGTGKTAFFEAIELGLTGKILR 55 >gi|313906345|ref|ZP_07839686.1| SMC domain protein [Eubacterium cellulosolvens 6] gi|313468809|gb|EFR64170.1| SMC domain protein [Eubacterium cellulosolvens 6] Length = 408 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I++ +FR + E ++F TI+ G NG GKS+L +A+ Y Sbjct: 1 MYLKSIKLHNFRCY-ENLSVDFNSEFTILVGDNGAGKSALLDAVSIALGSYIA 52 >gi|300864424|ref|ZP_07109295.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337568|emb|CBN54443.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 688 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHL---TIVNGQNGYGKSSLSEAIEWLFYG 76 KL I++ +FR F +I FA T+++G NG GK++L A W+ Y Sbjct: 1 MKLNSIKLYNFRQFYGKTPEITFASGTRNTTMIHGNNGSGKTTLMNAFTWVLYE 54 >gi|295402120|ref|ZP_06812079.1| DNA replication and repair protein RecF [Geobacillus thermoglucosidasius C56-YS93] gi|312109155|ref|YP_003987471.1| DNA replication and repair protein RecF [Geobacillus sp. Y4.1MC1] gi|294975803|gb|EFG51422.1| DNA replication and repair protein RecF [Geobacillus thermoglucosidasius C56-YS93] gi|311214256|gb|ADP72860.1| DNA replication and repair protein RecF [Geobacillus sp. Y4.1MC1] Length = 374 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R + I+FA+++ I+ G+N GK+++ EAI L + R + Sbjct: 1 MFLTHLSLKNYRNYKSET-IQFANNVNIILGENAQGKTNMMEAIYVLAMAKSHRTANDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|225575694|ref|ZP_03784304.1| hypothetical protein RUMHYD_03787 [Blautia hydrogenotrophica DSM 10507] gi|225037098|gb|EEG47344.1| hypothetical protein RUMHYD_03787 [Blautia hydrogenotrophica DSM 10507] Length = 361 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + ++ +EF I+ G N GK+++ EA+ + + Sbjct: 1 MYIESVQLKNFRNYQSLE-LEFDQGTNILFGDNAQGKTNVLEAVYLCGTTKSHKGSKDRE 59 Query: 87 IK 88 + Sbjct: 60 MI 61 >gi|148380046|ref|YP_001254587.1| hypothetical protein CBO2090 [Clostridium botulinum A str. ATCC 3502] gi|153931048|ref|YP_001384342.1| hypothetical protein CLB_2027 [Clostridium botulinum A str. ATCC 19397] gi|153937844|ref|YP_001387879.1| hypothetical protein CLC_2032 [Clostridium botulinum A str. Hall] gi|148289530|emb|CAL83630.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152927092|gb|ABS32592.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 19397] gi|152933758|gb|ABS39257.1| conserved hypothetical protein [Clostridium botulinum A str. Hall] Length = 679 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +EI++FR + E IEF + L I+ G+N GK+++ A+E++F Sbjct: 1 MYISKLEINNFRCY-EDVDIEFNEGLNIIIGENNCGKTTIMRALEYIF 47 >gi|119716927|ref|YP_923892.1| putative exonuclease [Nocardioides sp. JS614] gi|119537588|gb|ABL82205.1| putative exonuclease [Nocardioides sp. JS614] Length = 881 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 +L +EI+ F F + ++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHHLEITAFGPFADTVAVDFDELSGAGLFLLSGATGSGKTSVLDAVCFALYGDVPGDR 60 Query: 77 YTQRRKHGD 85 T RR D Sbjct: 61 STARRLRSD 69 >gi|270291841|ref|ZP_06198056.1| DNA replication and repair protein RecF [Streptococcus sp. M143] gi|270279369|gb|EFA25211.1| DNA replication and repair protein RecF [Streptococcus sp. M143] Length = 365 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-TKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|240147607|ref|ZP_04746208.1| putative exonuclease SbcC [Roseburia intestinalis L1-82] gi|257200184|gb|EEU98468.1| putative exonuclease SbcC [Roseburia intestinalis L1-82] Length = 371 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + IS F + Q I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MKPVSLTISAFGPYAGEQTIDFERLGSQGLFLITGDTGAGKTTIFDAITFALYGEASGDV 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RKADMFRSKY 70 >gi|57642146|ref|YP_184624.1| chromosome segregation protein [Thermococcus kodakarensis KOD1] gi|68565874|sp|Q5JHN1|RAD50_PYRKO RecName: Full=DNA double-strand break repair rad50 ATPase gi|57160470|dbj|BAD86400.1| DNA double-strand break repair ATPase Rad50 homolog [Thermococcus kodakarensis KOD1] Length = 883 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 K+ + I FR + K+ F+ + ++ GQNG GKSS+ +A+ Y ++ + D Sbjct: 1 MKIEKLIIKDFRSHA-LTKVNFSSGINLIIGQNGSGKSSILDALLVGLYWPSKPKDLKKD 59 Query: 86 SIKK-RSIKTPMPMCMAVPRCKYQL 109 ++ T + + KYQ+ Sbjct: 60 DFERINGSGTEITVFFEKGNVKYQI 84 >gi|14590782|ref|NP_142852.1| chromosome segregation protein [Pyrococcus horikoshii OT3] gi|18202079|sp|O58687|RAD50_PYRHO RecName: Full=DNA double-strand break repair rad50 ATPase gi|3257342|dbj|BAA30025.1| 879aa long hypothetical purine NTPase [Pyrococcus horikoshii OT3] Length = 879 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + + +FR + +IEF + ++ GQNG GKSSL +AI Y + R G Sbjct: 1 MKIERVIVQNFRSH-KNSEIEFKPGINLIIGQNGAGKSSLLDAILVGLYWSKRMRLRG 57 >gi|238855509|ref|ZP_04645814.1| DNA replication and repair protein RecF [Lactobacillus jensenii 269-3] gi|282931535|ref|ZP_06337034.1| DNA replication and repair protein RecF [Lactobacillus jensenii 208-1] gi|238831875|gb|EEQ24207.1| DNA replication and repair protein RecF [Lactobacillus jensenii 269-3] gi|281304342|gb|EFA96445.1| DNA replication and repair protein RecF [Lactobacillus jensenii 208-1] Length = 374 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ ++R F E++ F+ ++ I GQN GK++L EA+ +L + R Sbjct: 1 MYLKQLKLQNWRNFEELET-GFSPNVNIFIGQNAQGKTNLLEAVYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGQK 66 >gi|218288136|ref|ZP_03492435.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241495|gb|EED08668.1| SMC domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 824 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + I R + E Q+I+F L + G G GKS++ +AI +G R Sbjct: 1 MRPIRLVIQGLRSYRERQEIDFQALTEHGLFGIFGPTGSGKSTILDAITLALFGSATRAS 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|157149944|ref|YP_001449331.1| recombination protein F [Streptococcus gordonii str. Challis substr. CH1] gi|189039648|sp|A8AU71|RECF_STRGC RecName: Full=DNA replication and repair protein recF gi|157074738|gb|ABV09421.1| DNA replication and repair protein RecF [Streptococcus gordonii str. Challis substr. CH1] Length = 361 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 L + + HFR + + + I F L I GQN GK+++ E+I +L + R R D Sbjct: 1 MWLKSLTLKHFRNYQDAE-INFHSGLNIFLGQNAQGKTNILESIYFLALTRSHRTRSDKD 59 Query: 86 SIKKRSIKTP 95 I + Sbjct: 60 FIHFQEKDLK 69 >gi|149190759|ref|ZP_01869025.1| exonuclease SbcC, putative [Vibrio shilonii AK1] gi|148835415|gb|EDL52386.1| exonuclease SbcC, putative [Vibrio shilonii AK1] Length = 1014 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F+ + I+F+ L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MKPLKLTLQAFGPFSGKESIDFSQLGDCPLFLINGPTGSGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 + + V Sbjct: 61 RTGDQMRCDYADSKTLTTLV 80 >gi|15806921|ref|NP_295645.1| exonuclease SbcC [Deinococcus radiodurans R1] gi|17433256|sp|Q9RT44|SBCC_DEIRA RecName: Full=Nuclease sbcCD subunit C gi|6459706|gb|AAF11474.1|AE002031_3 exonuclease SbcC [Deinococcus radiodurans R1] Length = 909 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 K L + + F F + ++FAD L + G G GKSSL +A+ + YG T R Sbjct: 1 MKPLHLTLRGFTAFRQTTDLDFADLELFALVGPTGSGKSSLLDAMTFALYGETARLGATG 60 Query: 85 -DSIKKRSIKT 94 D++ + +T Sbjct: 61 LDALISQGERT 71 >gi|306826174|ref|ZP_07459509.1| recombination protein F [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431650|gb|EFM34631.1| recombination protein F [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 363 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-TKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|225028835|ref|ZP_03718027.1| hypothetical protein EUBHAL_03122 [Eubacterium hallii DSM 3353] gi|224953831|gb|EEG35040.1| hypothetical protein EUBHAL_03122 [Eubacterium hallii DSM 3353] Length = 366 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE++++R F + K+EF+ + I G N GK++L E+I + R Sbjct: 1 MFVESIELNNYRNF-DSLKVEFSPGVNIFFGDNAQGKTNLLESIYVSGTLRSHRGSRDKD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRFGED 66 >gi|254234488|ref|ZP_04927811.1| hypothetical protein PACG_00346 [Pseudomonas aeruginosa C3719] gi|126166419|gb|EAZ51930.1| hypothetical protein PACG_00346 [Pseudomonas aeruginosa C3719] Length = 610 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L I++SHFRG+ I +T + G+N YGKS++ EA+ F + D Sbjct: 1 MRLKTIKLSHFRGYRTTTVIPIDVAMTGIVGRNDYGKSTVLEALAIFFDSVDIKPDKSD 59 >gi|257076095|ref|ZP_05570456.1| chromosome segregation protein [Ferroplasma acidarmanus fer1] Length = 894 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+I +F E +I F + I+ G+NG GK+S+ +AI++ + ++ + + + Sbjct: 3 IESIKIINFLSH-ENTEITFEQGINIITGKNGAGKTSILDAIKFALFAESRNNEKNNELI 61 Query: 89 KRS 91 K+ Sbjct: 62 KKG 64 >gi|117923321|ref|YP_863938.1| DNA replication and repair protein RecF [Magnetococcus sp. MC-1] gi|259563664|sp|A0L3I9|RECF_MAGSM RecName: Full=DNA replication and repair protein recF gi|117607077|gb|ABK42532.1| DNA replication and repair protein RecF [Magnetococcus sp. MC-1] Length = 382 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + + FR TE + + F L ++ G NG+GKS+L EAI L G + Sbjct: 1 MQLDRLTLRDFRNITEAE-LRFGPGLNLITGPNGHGKSNLLEAIGLLATGRS 51 >gi|332668536|ref|YP_004451543.1| DNA replication and repair protein RecF [Cellulomonas fimi ATCC 484] gi|332337573|gb|AEE44156.1| DNA replication and repair protein RecF [Cellulomonas fimi ATCC 484] Length = 423 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T + G NG GK++L EA+ ++ + R + Sbjct: 1 MYVAHLSLTDFRSYA-QVELPLDPGITALVGPNGQGKTNLVEAVGYVATLGSHRVPSDAA 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRAG 64 >gi|310643057|ref|YP_003947815.1| smc domain protein [Paenibacillus polymyxa SC2] gi|309248007|gb|ADO57574.1| SMC domain protein [Paenibacillus polymyxa SC2] Length = 1129 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++++ + + E Q+I F D L + G G GKS+L +AI YG +R +G Sbjct: 6 LKLAGLQSYRESQEIRFDDLTETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNG 62 >gi|308069945|ref|YP_003871550.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] gi|305859224|gb|ADM71012.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] Length = 1131 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++++ + + E Q+I F D L + G G GKS+L +AI YG +R +G Sbjct: 6 LKLAGLQSYRESQEIRFDDLTETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNG 62 >gi|295402808|ref|ZP_06812744.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294975154|gb|EFG50796.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 648 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +F+ F+E + IEF + L ++ G N GK+++ +AIE++F + D Sbjct: 1 MYISKLYIKNFKCFSEFE-IEFNEGLNVIIGSNNSGKTTIIKAIEYIFNRSVSKTPSIDD 59 Query: 87 IKKRSIKTPMP 97 K P Sbjct: 60 FNKELDDLDNP 70 >gi|254519916|ref|ZP_05131972.1| exonuclease sbcC [Clostridium sp. 7_2_43FAA] gi|226913665|gb|EEH98866.1| exonuclease sbcC [Clostridium sp. 7_2_43FAA] Length = 1044 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 42/94 (44%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + I+ F + E Q+++F ++ ++ G G GK+++ +AI + YG Sbjct: 1 MKIRKLIITGFGPYAERQELDFESSLDGKNMFVITGNTGAGKTTIFDAINFALYGEASGS 60 Query: 82 KHG-----DSIKKRSIKTPMPMCMAVPRCKYQLK 110 + +S T + + ++ +Y +K Sbjct: 61 ERDGKNLRSDFADKSTPTEVELWFSLRNKEYYIK 94 >gi|45358904|ref|NP_988461.1| SMC domain-containing protein [Methanococcus maripaludis S2] gi|49036441|sp|P62134|RAD50_METMP RecName: Full=DNA double-strand break repair rad50 ATPase gi|45047770|emb|CAF30897.1| DNA double-strand break repair rad50 ATPase [Methanococcus maripaludis S2] Length = 993 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++ +FR I F+ +T + GQNG GKSS+ +A+ + + +++ Sbjct: 3 IKNIKMENFRSHR-NTSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENLM 61 Query: 89 KRS 91 ++ Sbjct: 62 QQG 64 >gi|306828609|ref|ZP_07461803.1| recombination protein F [Streptococcus mitis ATCC 6249] gi|304429217|gb|EFM32303.1| recombination protein F [Streptococcus mitis ATCC 6249] Length = 363 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-TKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|269126152|ref|YP_003299522.1| SMC domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311110|gb|ACY97484.1| SMC domain protein [Thermomonospora curvata DSM 43183] Length = 815 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + + +F F ++F D ++ G G GKS++ +AI + YG R Sbjct: 1 MRPLRLYLENFGSFRAPTSVDFHDVDYFVLVGPTGAGKSTVIDAICFALYGTVPR 55 >gi|291558316|emb|CBL35433.1| Recombinational DNA repair ATPase (RecF pathway) [Eubacterium siraeum V10Sc8a] Length = 377 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +FR E Q+ F +++ ++ G N GK++L EAI G + R S Sbjct: 1 MQIKRLYVKNFRNIRE-QEFCFHENVNVLCGNNAQGKTNLCEAISLCM-GPSFRTSRQSS 58 Query: 87 IKKRSIKTPMPMCM 100 S+ C+ Sbjct: 59 YIPFSLDNSKEKCV 72 >gi|126697570|ref|YP_001086467.1| DNA replication and repair protein [Clostridium difficile 630] gi|254977346|ref|ZP_05273818.1| DNA replication and repair protein [Clostridium difficile QCD-66c26] gi|255094676|ref|ZP_05324154.1| DNA replication and repair protein [Clostridium difficile CIP 107932] gi|255102903|ref|ZP_05331880.1| DNA replication and repair protein [Clostridium difficile QCD-63q42] gi|255308723|ref|ZP_05352894.1| DNA replication and repair protein [Clostridium difficile ATCC 43255] gi|255316430|ref|ZP_05358013.1| DNA replication and repair protein [Clostridium difficile QCD-76w55] gi|255519090|ref|ZP_05386766.1| DNA replication and repair protein [Clostridium difficile QCD-97b34] gi|255652273|ref|ZP_05399175.1| DNA replication and repair protein [Clostridium difficile QCD-37x79] gi|260681773|ref|YP_003213058.1| DNA replication and repair protein [Clostridium difficile CD196] gi|306521987|ref|ZP_07408334.1| DNA replication and repair protein [Clostridium difficile QCD-32g58] gi|123363673|sp|Q18C86|RECF_CLOD6 RecName: Full=DNA replication and repair protein recF gi|115249007|emb|CAJ66818.1| DNA replication and repair protein RecF [Clostridium difficile] gi|260207936|emb|CBA60047.1| DNA replication and repair protein [Clostridium difficile CD196] Length = 371 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ +FR + + +EF + ++ G+NG GK+++ E+I L +G + R Sbjct: 1 MKLKSLQLVNFRNY-KKLHLEFNGKVNLLVGKNGQGKTNIVESIYMLSFGKSFRTNKDKE 59 Query: 87 IKKRSIK 93 + + + + Sbjct: 60 MVRFNSE 66 >gi|170718431|ref|YP_001783358.1| recombination protein F [Haemophilus somnus 2336] gi|189039626|sp|B0UUM0|RECF_HAES2 RecName: Full=DNA replication and repair protein recF gi|168826560|gb|ACA31931.1| DNA replication and repair protein RecF [Haemophilus somnus 2336] Length = 358 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I+HFR T I +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLIINHFRNLTAID-LEFERGFNFIIGNNGSGKTSLLEAIFYLGHGRSFKSAVANR 59 Query: 87 IKKRSIKTP 95 I S + P Sbjct: 60 II--SYQQP 66 >gi|113460284|ref|YP_718343.1| recombination protein F [Haemophilus somnus 129PT] gi|123327073|sp|Q0I0Y5|RECF_HAES1 RecName: Full=DNA replication and repair protein recF gi|112822327|gb|ABI24416.1| DNA replication and repair protein RecF [Haemophilus somnus 129PT] Length = 358 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I+HFR T I +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLIINHFRNLTAID-LEFERGFNFIIGNNGSGKTSLLEAIFYLGHGRSFKSAVANR 59 Query: 87 IKKRSIKTP 95 I S + P Sbjct: 60 II--SYQQP 66 >gi|76801408|ref|YP_326416.1| chromosome segregation protein [Natronomonas pharaonis DSM 2160] gi|76557273|emb|CAI48849.1| DNA double-strand break repair rad50 ATPase [Natronomonas pharaonis DSM 2160] Length = 897 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I + +F+ + E ++ + +T+++G NG GKSSL EA + YG Sbjct: 1 MRFERIRLRNFKCYAE-TELSLREGVTVIHGVNGSGKSSLLEACFFALYGSAA 52 >gi|116203627|ref|XP_001227624.1| hypothetical protein CHGG_09697 [Chaetomium globosum CBS 148.51] gi|88175825|gb|EAQ83293.1| hypothetical protein CHGG_09697 [Chaetomium globosum CBS 148.51] Length = 1690 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQN 59 M + K T A + T AR +I KL+ +++F+ + Q++ F + V G N Sbjct: 208 MDIILKSRTMAIPTVEETGPKARTVITKLV---LTNFKSYAGTQEVGPFHASFSSVVGPN 264 Query: 60 GYGKSSLSEAIEWLFYGYTQRRKHG 84 G GKS++ +++ ++F + + G Sbjct: 265 GSGKSNVIDSLLFVFGFRASKMRQG 289 >gi|121603905|ref|YP_981234.1| ATP-dependent OLD family endonuclease [Polaromonas naphthalenivorans CJ2] gi|120592874|gb|ABM36313.1| ATP-dependent endonuclease of the OLD family [Polaromonas naphthalenivorans CJ2] Length = 637 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 13/111 (11%) Query: 2 TRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI---------EFADHL 52 T + K +C SK T K+ L I++ +FR + + +F L Sbjct: 33 TDIFSKVNLSCYSKQKT--VRNKINMHLSKIKLWNFRKYGDNSTFILEKPNLYLDFNSGL 90 Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKHGDSIKKRSIKTPMPMCMA 101 ++ G+N GKS++ +AI + ++ R D + + + +A Sbjct: 91 NVLIGENDSGKSAIIDAIRLVMKTHSYDWLRIDDDDFHVGQNRLRIELTLA 141 >gi|218697189|ref|YP_002404856.1| hypothetical protein EC55989_3921 [Escherichia coli 55989] gi|218353921|emb|CAV00353.1| conserved hypothetical protein [Escherichia coli 55989] Length = 628 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F + Sbjct: 19 LHMRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKN 78 Query: 85 D 85 D Sbjct: 79 D 79 >gi|167751442|ref|ZP_02423569.1| hypothetical protein EUBSIR_02438 [Eubacterium siraeum DSM 15702] gi|167655688|gb|EDR99817.1| hypothetical protein EUBSIR_02438 [Eubacterium siraeum DSM 15702] Length = 377 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +FR E Q+ F +++ ++ G N GK++L EAI G + R S Sbjct: 1 MQIKRLYVKNFRNIRE-QEFCFHENVNVLCGNNAQGKTNLCEAISLCM-GPSFRTSRQSS 58 Query: 87 IKKRSIKTPMPMCM 100 S+ C+ Sbjct: 59 YIPFSLDNSKEKCV 72 >gi|260665213|ref|ZP_05866062.1| recombination protein F [Lactobacillus jensenii SJ-7A-US] gi|260560950|gb|EEX26925.1| recombination protein F [Lactobacillus jensenii SJ-7A-US] Length = 374 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ ++R F E++ F+ ++ I GQN GK++L EA+ +L + R Sbjct: 1 MYLKQLKLQNWRNFEELET-GFSPNVNIFIGQNAQGKTNLLEAVYFLALTRSHRTNSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRFGQK 66 >gi|255037634|ref|YP_003088255.1| DNA replication and repair protein RecF [Dyadobacter fermentans DSM 18053] gi|254950390|gb|ACT95090.1| DNA replication and repair protein RecF [Dyadobacter fermentans DSM 18053] Length = 365 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + +++F+ + E F +H+ + G+NG GK++L +AI +L + Sbjct: 1 MWLEKLRLTYFKSYEEKA-FVFGEHVNCIVGENGSGKTNLLDAIYFLTLTKSA 52 >gi|166157052|emb|CAO79509.1| DNA replication and repair protein RecF [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 352 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L++++++ R T++ I F +++T++ G NG GKS++ EAI L G ++ K+ Sbjct: 1 MKILNLKLTNLRNHTKLSLI-FDNNVTLITGDNGSGKSTILEAIHILSVGKSKISKYDRD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIQYGKK 66 >gi|296110747|ref|YP_003621128.1| recombination protein F [Leuconostoc kimchii IMSNU 11154] gi|295832278|gb|ADG40159.1| recombination protein F [Leuconostoc kimchii IMSNU 11154] Length = 372 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++ ++R + ++ K++F+D + + G+N GK++L E+I L + R Sbjct: 1 MELTSLKLVNYRNYADL-KLDFSDGVNVFLGENAQGKTNLLESIYVLALTRSHRTSSDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|260945319|ref|XP_002616957.1| hypothetical protein CLUG_02401 [Clavispora lusitaniae ATCC 42720] gi|238848811|gb|EEQ38275.1| hypothetical protein CLUG_02401 [Clavispora lusitaniae ATCC 42720] Length = 1193 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + +I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MYIKKIIIQGFKTYKNTTEIDLLSPHFNVVVGRNGSGKSNFFAAIRFVL 49 >gi|218189998|gb|EEC72425.1| hypothetical protein OsI_05743 [Oryza sativa Indica Group] gi|222622118|gb|EEE56250.1| hypothetical protein OsJ_05272 [Oryza sativa Japonica Group] Length = 679 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|167998859|ref|XP_001752135.1| condensin complex component SMC4 [Physcomitrella patens subsp. patens] gi|162696530|gb|EDQ82868.1| condensin complex component SMC4 [Physcomitrella patens subsp. patens] Length = 1283 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ + Q I F + V G NG GKS++ +A+ ++F G ++ Sbjct: 24 IKKMVLENFKSYAGKQYIGPFHKCFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 78 >gi|41052609|dbj|BAD08001.1| putative SMC3 protein [Oryza sativa Japonica Group] Length = 1205 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|268533716|ref|XP_002631987.1| Hypothetical protein CBG10266 [Caenorhabditis briggsae] gi|187031189|emb|CAP29725.1| hypothetical protein CBG_10266 [Caenorhabditis briggsae AF16] Length = 639 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L I++ +FR F FA L +++G N GKSSL A+ + G Sbjct: 3 YLHSIDVVNFRDFRNRT-FRFAPGLNVIHGANASGKSSLIAALNFGLTGS 51 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--- 81 ++ + + I + T + EF + + G N GK++L AI + G R Sbjct: 316 VMVHIQSVYIRKYFS-TSRTQFEFTSGVNCLPGGNSSGKTTLVAAINFTLLGPECERFTD 374 Query: 82 KHGD 85 K GD Sbjct: 375 KRGD 378 >gi|321457133|gb|EFX68226.1| structural maintenance of chromosome protein 3 [Daphnia pulex] Length = 1200 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFKSYREQTVVEPFHPGHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|206973578|ref|ZP_03234496.1| ATP-dependent endonuclease of the OLD family [Bacillus cereus H3081.97] gi|206747734|gb|EDZ59123.1| ATP-dependent endonuclease of the OLD family [Bacillus cereus H3081.97] Length = 696 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL ++I +FR F + + I+ D T + G N GK+S +A+ LF ++ R Sbjct: 1 MKLTKVKICNFRSFHKERTIDLED-FTSIIGSNSSGKTSFFQALLKLFGETSRER 54 >gi|255657642|ref|ZP_05403051.1| DNA replication and repair protein [Clostridium difficile QCD-23m63] gi|296452677|ref|ZP_06894368.1| recombination protein F [Clostridium difficile NAP08] gi|296880070|ref|ZP_06904039.1| recombination protein F [Clostridium difficile NAP07] gi|296258459|gb|EFH05363.1| recombination protein F [Clostridium difficile NAP08] gi|296428937|gb|EFH14815.1| recombination protein F [Clostridium difficile NAP07] Length = 371 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ +FR + + +EF + ++ G+NG GK+++ E+I L +G + R Sbjct: 1 MKLKSLQLVNFRNY-KKLHLEFNGKVNLLVGKNGQGKTNIVESIYMLSFGKSFRTNKDKE 59 Query: 87 IKKRSIK 93 + + + + Sbjct: 60 MVRFNSE 66 >gi|237667209|ref|ZP_04527193.1| gp49 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655557|gb|EEP53113.1| gp49 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 656 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +F+ + IEF + LT + G+NG GKS++ +A W+ +G Sbjct: 1 MYIKKLGLENFKKVKGLD-IEFGNELTTIAGENGTGKSTIMDAFMWVLFG 49 >gi|229916109|ref|YP_002884755.1| SMC domain protein [Exiguobacterium sp. AT1b] gi|229467538|gb|ACQ69310.1| SMC domain protein [Exiguobacterium sp. AT1b] Length = 1002 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ I F + E + I+F + +V+G+ G GK+++ +A+ + YG Sbjct: 1 MRPVELMIQAFGPYAERETIDFTQLVGRSMFVVSGRTGAGKTTIFDAMTFALYGRASGAL 60 Query: 83 HGDSIKKRSIKTP 95 S + P Sbjct: 61 RNASDFRSQYAQP 73 >gi|145345272|ref|XP_001417140.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577367|gb|ABO95433.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1186 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + + + F + G NG GKS++ ++I ++ Sbjct: 1 MYIEEVCIDGFKSYAKRTVVPGFDPLFNAITGLNGSGKSNILDSICFVLGISNLTHVRAA 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|328862083|gb|EGG11185.1| hypothetical protein MELLADRAFT_74124 [Melampsora larici-populina 98AG31] Length = 1132 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L++ + F+ + I F V G NG GKS++ +AI ++ Sbjct: 1 MHILELILDGFKSYPVRTTISGFDPSFNAVTGLNGSGKSNILDAICFVLGITNLSAVRAT 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|319936199|ref|ZP_08010619.1| hypothetical protein HMPREF9488_01451 [Coprobacillus sp. 29_1] gi|319808773|gb|EFW05306.1| hypothetical protein HMPREF9488_01451 [Coprobacillus sp. 29_1] Length = 1024 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +++ + ++ F + I+F D L +++G G GK+++ +A+ + YG Sbjct: 1 MRIISLTMNAFMTYKSQTTIDFEDMIENGLYLISGPTGAGKTTIFDAMTFALYGVASGSH 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 RNQSYFRS 68 >gi|75907930|ref|YP_322226.1| exonuclease SbcC [Anabaena variabilis ATCC 29413] gi|75701655|gb|ABA21331.1| Exonuclease SbcC [Anabaena variabilis ATCC 29413] Length = 1008 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 5 QLVLKNFLSYRDAT-LDFRGLHTACICGANGAGKSSLLEAITWALWGESRAAVEDDVINS 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 + + + KY++ Sbjct: 64 GEKEVRVDFTFQNNQQKYRV 83 >gi|332638149|ref|ZP_08417012.1| recombination protein F [Weissella cibaria KACC 11862] Length = 381 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL++++++FR + ++ + F+ + + G N GK++L EAI L + R Sbjct: 1 MELLELKLNNFRNYQDLA-VTFSPGVNVFLGPNAQGKTNLLEAIYVLALARSHRTTSDKE 59 Query: 87 IKKRSIKTPMPMCMAVPRCKY 107 + M V R +Y Sbjct: 60 LI--GWDGKEAMVSGVVRRQY 78 >gi|66044668|ref|YP_234509.1| hypothetical protein Psyr_1420 [Pseudomonas syringae pv. syringae B728a] gi|63255375|gb|AAY36471.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 874 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L +++ FRGF + + + +T+V G NG GKSS EA+E G + Sbjct: 82 RLHQLQVGPFRGFMRPEAFDLSHDITLVYGANGTGKSSFFEALEVAMLGSISEA----QV 137 Query: 88 KKRSIKT 94 K+ + Sbjct: 138 KRLDQRQ 144 >gi|19114172|ref|NP_593260.1| mitotic cohesin complex subunit Psm3 [Schizosaccharomyces pombe 972h-] gi|29427564|sp|O42649|SMC3_SCHPO RecName: Full=Structural maintenance of chromosomes protein 3; AltName: Full=Cohesin complex Psm3 subunit gi|2661614|emb|CAA15722.1| mitotic cohesin complex subunit Psm3 [Schizosaccharomyces pombe] Length = 1194 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE + H ++ G+NG GKS+ AI ++ Sbjct: 1 MYITKIVIQGFKSYKDYTVIEPLSPHHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|296273057|ref|YP_003655688.1| SMC domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296097231|gb|ADG93181.1| SMC domain protein [Arcobacter nitrofigilis DSM 7299] Length = 789 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++ +F+ + + ++F + L + G+NG GKS++ EAI + YG + R + + ++ Sbjct: 3 LCKLKLENFKRYKTFE-LDFDEGLVGIIGKNGSGKSTIFEAILFALYGEFKDRGYKEIVR 61 >gi|262199290|ref|YP_003270499.1| SMC domain protein [Haliangium ochraceum DSM 14365] gi|262082637|gb|ACY18606.1| SMC domain protein [Haliangium ochraceum DSM 14365] Length = 851 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + R + + I+F++ L + G G GKSS+ EAI + YG + + G Sbjct: 1 MRPLLLRVKGLRSYASERTIDFSERTLAAIVGDTGAGKSSILEAICYALYGSSSWNQRG 59 >gi|299116780|emb|CBN74893.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1444 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +E+ +F+ + +++I F + + G NG GKS++ +A+ ++F ++ Sbjct: 88 ITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKK 140 >gi|291531946|emb|CBK97531.1| recF protein [Eubacterium siraeum 70/3] Length = 377 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +FR E Q+ F +++ ++ G N GK++L EAI G + R S Sbjct: 1 MQIKRLYVKNFRNIRE-QEFCFHENVNVLCGNNAQGKTNLCEAISLCM-GPSFRTSRQSS 58 Query: 87 IKKRSIKTPMPMCM 100 S+ C+ Sbjct: 59 YIPFSLDNSKEKCV 72 >gi|260811386|ref|XP_002600403.1| hypothetical protein BRAFLDRAFT_129060 [Branchiostoma floridae] gi|229285690|gb|EEN56415.1| hypothetical protein BRAFLDRAFT_129060 [Branchiostoma floridae] Length = 1229 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I I F+ + + + F + G NG GKS++ ++I +L + Sbjct: 1 MYIKEIVIDGFKSYAQRTVVSGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAG 60 Query: 86 SIKKRSIKT 94 S+++ K+ Sbjct: 61 SLQELVYKS 69 >gi|134097551|ref|YP_001103212.1| putative ATP-dependent dsDNA exonuclease [Saccharopolyspora erythraea NRRL 2338] gi|291009486|ref|ZP_06567459.1| putative ATP-dependent dsDNA exonuclease [Saccharopolyspora erythraea NRRL 2338] gi|133910174|emb|CAM00287.1| putative ATP-dependent dsDNA exonuclease [Saccharopolyspora erythraea NRRL 2338] Length = 984 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L +E++ F + + Q ++F +D L +++G G GK++L +A+ + YG Sbjct: 1 MRLHHLEVTAFGPYRDTQSVDFDTLGSDGLFLLHGDTGAGKTTLLDAVAFAIYG-AVPGA 59 Query: 83 HGDSIKKRSIKTPMP 97 G+ +K+ T P Sbjct: 60 RGE-VKRLRCDTADP 73 >gi|317029494|ref|XP_001391750.2| structural maintenance of chromosomes protein 4 [Aspergillus niger CBS 513.88] Length = 1440 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 238 ITTLILMNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQG 294 >gi|300866238|ref|ZP_07110950.1| DNA replication and repair protein recF [Oscillatoria sp. PCC 6506] gi|300335757|emb|CBN56110.1| DNA replication and repair protein recF [Oscillatoria sp. PCC 6506] Length = 395 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + FR + + + I F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLRSIHLRQFRNYRDQKVI-FDAPKTILVGNNAQGKSNLLEAVELLSTLKSHRATRDRD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|229493888|ref|ZP_04387660.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus erythropolis SK121] gi|229319165|gb|EEN85014.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus erythropolis SK121] Length = 992 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+S F F + +++F AD L +++G G GK+++ +A+ + YG Sbjct: 1 MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVAFALYG 54 >gi|182417298|ref|ZP_02948641.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|182378859|gb|EDT76376.1| conserved hypothetical protein [Clostridium butyricum 5521] Length = 656 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +F+ + IEF + LT + G+NG GKS++ +A W+ +G Sbjct: 1 MYIKKLGLENFKKVKGLD-IEFGNELTTIAGENGTGKSTIMDAFMWVLFG 49 >gi|78189560|ref|YP_379898.1| ATPase [Chlorobium chlorochromatii CaD3] gi|78171759|gb|ABB28855.1| ATPase [Chlorobium chlorochromatii CaD3] Length = 427 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+GF + F + ++ G NG GK+S+ +A+ + G + DS Sbjct: 1 MRIEHLIVKNFKGFVSKE-FTFHPNFNLIVGMNGTGKTSMLDALA-VAIGSWFLGFYVDS 58 Query: 87 IKKRSIK 93 +K R I+ Sbjct: 59 LKMRQIR 65 >gi|134076232|emb|CAK39518.1| unnamed protein product [Aspergillus niger] Length = 1309 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 107 ITTLILMNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQG 163 >gi|123503015|ref|XP_001328416.1| SMC flexible hinge domain protein [Trichomonas vaginalis G3] gi|121911359|gb|EAY16193.1| SMC flexible hinge domain protein, putative [Trichomonas vaginalis G3] Length = 1155 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ +++ F+ V G NG GKS+ AIE++ Sbjct: 4 IHIKRVTIHGFKSYSDTVTFGPFSPGTNAVVGLNGSGKSNFYNAIEFVL 52 >gi|111022837|ref|YP_705809.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus jostii RHA1] gi|110822367|gb|ABG97651.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus jostii RHA1] Length = 993 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L +E+ F F +++F AD L +++G G GK+++ +A+ + YG T Sbjct: 1 MRLHRLEVEAFGPFAGSVEVDFDRLGADGLFLLHGHTGAGKTTILDAVAFALYG-TVPGA 59 Query: 83 HGDSIKKRSIKTP 95 D + S P Sbjct: 60 RKDGKRLLSDHAP 72 >gi|28958118|gb|AAH47324.1| Structural maintenance of chromosomes 3 [Homo sapiens] Length = 1217 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+L AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNLFYAIQFVL 49 >gi|16800310|ref|NP_470578.1| hypothetical protein lin1241 [Listeria innocua Clip11262] gi|16413715|emb|CAC96472.1| lin1241 [Listeria innocua Clip11262] Length = 646 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL +++ +F+G E++ I+F + T + G N GK+++ +A WL + K + Sbjct: 4 IKLLKLQLENFKGIKELE-IDFENS-TSIYGANASGKTTIIDAFTWLLFDKDSTNKKDFA 61 Query: 87 IKKRSIKTP 95 IK ++ Sbjct: 62 IKTLDMEGK 70 >gi|312865752|ref|ZP_07725974.1| DNA replication and repair protein RecF [Streptococcus downei F0415] gi|311098627|gb|EFQ56849.1| DNA replication and repair protein RecF [Streptococcus downei F0415] Length = 270 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 L I + +FR + ++ EF+ L I GQN GK++ EAI +L + R R + Sbjct: 1 MWLESISLKNFRNYAQMTA-EFSSGLNIFLGQNAQGKTNFLEAIYFLALTRSHRTRLDKE 59 Query: 86 SIKKRSIK 93 I ++ Sbjct: 60 LINFQAKD 67 >gi|312138759|ref|YP_004006095.1| exonuclease sbcc [Rhodococcus equi 103S] gi|311888098|emb|CBH47410.1| putative exonuclease SbcC [Rhodococcus equi 103S] Length = 993 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L D++++ F F E ++F AD L +++GQ G GK+++ +A+ + YG Sbjct: 1 MRLHDLQVTAFGPFAETVTVDFDELGADGLFLLHGQTGAGKTTILDAVAFALYGT 55 >gi|325676548|ref|ZP_08156226.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus equi ATCC 33707] gi|325552726|gb|EGD22410.1| ATP-dependent dsDNA exonuclease SbcC [Rhodococcus equi ATCC 33707] Length = 993 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L D++++ F F E ++F AD L +++GQ G GK+++ +A+ + YG Sbjct: 1 MRLHDLQVTAFGPFAETVTVDFDELGADGLFLLHGQTGAGKTTILDAVAFALYGT 55 >gi|149237575|ref|XP_001524664.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451261|gb|EDK45517.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1449 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q I F + V G NG GKS++ +A+ ++F + + G Sbjct: 225 IEKLVLTNFKSYAGCQTIGPFHSSFSSVVGPNGSGKSNVIDAMLFVFGFKATKMRQG 281 >gi|157111275|ref|XP_001651465.1| structural maintenance of chromosomes smc1 [Aedes aegypti] gi|108878459|gb|EAT42684.1| structural maintenance of chromosomes smc1 [Aedes aegypti] Length = 1227 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IE+ +F+ + I + V G NG GKS+ +AI ++ T Sbjct: 6 LQFIEVDNFKSYRGKVTIGPLKKFSAVIGPNGSGKSNFMDAISFVMGEKT 55 >gi|153854582|ref|ZP_01995852.1| hypothetical protein DORLON_01847 [Dorea longicatena DSM 13814] gi|149752891|gb|EDM62822.1| hypothetical protein DORLON_01847 [Dorea longicatena DSM 13814] Length = 1067 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +S F + +I+F + L ++ G G GK+++ +AI + Y T Sbjct: 1 MRPVKLIMSAFGSYAGKTEIDFTEIPNGLFLITGDTGAGKTTVFDAITYALYDRTSGGTR 60 Query: 84 GDSIKKRSI 92 ++ + Sbjct: 61 DGNMMRSQY 69 >gi|320195808|gb|EFW70433.1| Purine NTPase [Escherichia coli WV_060327] Length = 797 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL + +++F+ F + I L I++G NG+GK++L +AIE F G R + Sbjct: 1 MIKLGKLRVNNFKSFKDDFTINLGSTDLFILDGPNGFGKTTLFDAIELCFTGKIGRVSNT 60 Query: 85 DSIKK 89 D +K Sbjct: 61 DKKQK 65 >gi|240144571|ref|ZP_04743172.1| ABC transporter, ATP-binding protein [Roseburia intestinalis L1-82] gi|257203386|gb|EEV01671.1| ABC transporter, ATP-binding protein [Roseburia intestinalis L1-82] Length = 238 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + R F ++K++F +T G+NG GKS+L EA+ + +G+ + + + Sbjct: 22 LKGIRAFKGVEKLDFNKPITFFVGENGSGKSTLLEALA-VAHGFNPEGGTKNYV-FSTHD 79 Query: 94 TPMPMCMAV 102 T +C A+ Sbjct: 80 THSELCDAI 88 >gi|319440152|ref|ZP_07989308.1| recombination protein F [Corynebacterium variabile DSM 44702] Length = 391 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + +E +T+ G NG GK+++ EA+ +L + + R + Sbjct: 1 MYLRSLHLGDFRSWASLD-LELTPGVTVFAGPNGNGKTNIVEAVGYLAHLSSHRVSGDAA 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + AV Sbjct: 60 LVREGCDSARVSATAV 75 >gi|169830222|ref|YP_001716204.1| DNA replication and repair protein RecF [Candidatus Desulforudis audaxviator MP104C] gi|226737788|sp|B1I1H6|RECF_DESAP RecName: Full=DNA replication and repair protein recF gi|169637066|gb|ACA58572.1| DNA replication and repair protein RecF [Candidatus Desulforudis audaxviator MP104C] Length = 360 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I+ +FR F + ++ A L IV G+N GK++ EA+ + G++ R Sbjct: 1 MRLTRIKAGNFRNF-QHLDVQPAAGLNIVRGRNAQGKTNFIEAVFFALRGHSFRSLRDRE 59 Query: 87 IKKRSIKT 94 + ++ Sbjct: 60 LVTWGQES 67 >gi|148548173|ref|YP_001268275.1| DNA repair ATPase-like protein [Pseudomonas putida F1] gi|148512231|gb|ABQ79091.1| ATPase involved in DNA repair-like protein [Pseudomonas putida F1] Length = 929 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L K L + I +FRG + + LT+++ NG GKS++ A+EWL G Sbjct: 4 LPIKFLAVTIQNFRGIPDELVVPLDAPLTVIHAANGTGKSTICYALEWLVTG 55 >gi|226307718|ref|YP_002767678.1| nuclease SbcCD subunit C [Rhodococcus erythropolis PR4] gi|226186835|dbj|BAH34939.1| probable nuclease SbcCD subunit C [Rhodococcus erythropolis PR4] Length = 992 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +E+S F F + +++F AD L +++G G GK+++ +A+ + YG Sbjct: 1 MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVSFALYG 54 >gi|127513384|ref|YP_001094581.1| SMC domain-containing protein [Shewanella loihica PV-4] gi|126638679|gb|ABO24322.1| SMC domain protein [Shewanella loihica PV-4] Length = 1018 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F F + Q I+F ++ L ++NG G GK+++ +AI + YG T + Sbjct: 1 MRPLRLTMTAFGPFADEQIIDFAALGSNPLFLINGPTGAGKTTILDAICFALYGKTTGDE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + + + + Sbjct: 61 REGTQMRCDMADEQRL 76 >gi|328781019|ref|XP_003249903.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50 [Apis mellifera] Length = 1377 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Query: 28 KLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + ++ I+F+ LT++ G NG GK+++ EA+++ G Sbjct: 3 RIRRLSIRGIRNFGDEKEEALIKFSRPLTLILGPNGTGKTTIIEALKFATCG 54 >gi|315502709|ref|YP_004081596.1| smc domain protein [Micromonospora sp. L5] gi|315409328|gb|ADU07445.1| SMC domain protein [Micromonospora sp. L5] Length = 824 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F + ++F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDMAGFTVFRDETTVDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|301775071|ref|XP_002922958.1| PREDICTED: structural maintenance of chromosomes protein 1B-like [Ailuropoda melanoleuca] Length = 1235 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTA 54 >gi|302866151|ref|YP_003834788.1| SMC domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302569010|gb|ADL45212.1| SMC domain protein [Micromonospora aurantiaca ATCC 27029] Length = 824 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F + ++F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDMAGFTVFRDETTVDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|238063560|ref|ZP_04608269.1| nuclease sbcCD subunit C [Micromonospora sp. ATCC 39149] gi|237885371|gb|EEP74199.1| nuclease sbcCD subunit C [Micromonospora sp. ATCC 39149] Length = 323 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F + ++F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDMAGFTVFRDETTVDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|301025526|ref|ZP_07189056.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|299880064|gb|EFI88275.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 548 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F + D Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKND 59 >gi|237715297|ref|ZP_04545778.1| ATP binding protein [Bacteroides sp. D1] gi|262405139|ref|ZP_06081689.1| ATP binding protein [Bacteroides sp. 2_1_22] gi|294645436|ref|ZP_06723140.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294807068|ref|ZP_06765887.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229444606|gb|EEO50397.1| ATP binding protein [Bacteroides sp. D1] gi|262356014|gb|EEZ05104.1| ATP binding protein [Bacteroides sp. 2_1_22] gi|292639239|gb|EFF57553.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294445767|gb|EFG14415.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 449 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 14/82 (17%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--------- 77 ++ I+I +FRGF + EF + +V G N GK++L A++ Y Sbjct: 1 MRINTIKIKNFRGFEDK-SFEFDSRMNVVLGNNTTGKTTLLHAVQIALGAYLQALTLIPG 59 Query: 78 ----TQRRKHGDSIKKRSIKTP 95 ++ GD ++K S T Sbjct: 60 GKYFSRNFLKGDQVRKYSESTK 81 >gi|255939049|ref|XP_002560294.1| Pc15g00680 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584916|emb|CAP82954.1| Pc15g00680 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1179 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEIVIDGFKSYAVRTVISGWDEAFNSITGLNGSGKSNILDAICFVLGITNMTTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|170766770|ref|ZP_02901223.1| ATP/GTP-binding protein [Escherichia albertii TW07627] gi|170124208|gb|EDS93139.1| ATP/GTP-binding protein [Escherichia albertii TW07627] Length = 397 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F + D Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKND 59 >gi|83589043|ref|YP_429052.1| hypothetical protein Moth_0173 [Moorella thermoacetica ATCC 39073] gi|83571957|gb|ABC18509.1| hypothetical protein Moth_0173 [Moorella thermoacetica ATCC 39073] Length = 729 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I + F+ F + Q I + I+ G NG+GK+S EA+E + G + R +S Sbjct: 5 IRIKEITLEGFKCFFKKQSINCDADVIILTGNNGFGKTSFIEALELMATGKIEPRIGENS 64 Query: 87 IKK 89 K+ Sbjct: 65 TKR 67 >gi|38347960|ref|NP_941209.1| ATP/GTP-binding protein [Serratia marcescens] gi|157412119|ref|YP_001481460.1| ATP/GTP-binding protein [Escherichia coli APEC O1] gi|238910390|ref|ZP_04654227.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|296105228|ref|YP_003615374.1| hypothetical protein ECL_04901 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|38259437|emb|CAE51665.1| ATP/GTP-binding protein [Serratia marcescens] gi|99867144|gb|ABF67789.1| ATP/GTP-binding protein [Escherichia coli APEC O1] gi|295059687|gb|ADF64425.1| hypothetical protein ECL_04901 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|322614025|gb|EFY10961.1| hypothetical protein SEEM315_05513 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617917|gb|EFY14810.1| hypothetical protein SEEM971_14352 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625469|gb|EFY22295.1| hypothetical protein SEEM973_11125 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629934|gb|EFY26707.1| hypothetical protein SEEM974_18640 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632177|gb|EFY28928.1| hypothetical protein SEEM201_00619 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636472|gb|EFY33179.1| hypothetical protein SEEM202_12061 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322651304|gb|EFY47688.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652781|gb|EFY49120.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659083|gb|EFY55335.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663215|gb|EFY59419.1| hypothetical protein SEEM801_21632 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668702|gb|EFY64855.1| hypothetical protein SEEM507_12264 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674494|gb|EFY70587.1| hypothetical protein SEEM877_18241 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678300|gb|EFY74361.1| hypothetical protein SEEM867_21154 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682443|gb|EFY78464.1| hypothetical protein SEEM180_21589 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684156|gb|EFY80162.1| hypothetical protein SEEM600_11817 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192288|gb|EFZ77520.1| hypothetical protein SEEM581_18817 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196285|gb|EFZ81437.1| hypothetical protein SEEM501_13820 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201433|gb|EFZ86499.1| hypothetical protein SEEM460_09751 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206457|gb|EFZ91418.1| hypothetical protein SEEM020_01670 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212049|gb|EFZ96876.1| hypothetical protein SEEM6152_17804 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216954|gb|EGA01677.1| hypothetical protein SEEM0077_14821 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323224368|gb|EGA08657.1| hypothetical protein SEEM0055_16609 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228296|gb|EGA12427.1| hypothetical protein SEEM0052_07417 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233436|gb|EGA17529.1| hypothetical protein SEEM3312_16404 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237102|gb|EGA21169.1| hypothetical protein SEEM5258_14422 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243683|gb|EGA27699.1| hypothetical protein SEEM1156_06828 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246075|gb|EGA30062.1| hypothetical protein SEEM9199_17932 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250851|gb|EGA34729.1| hypothetical protein SEEM8282_20509 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257652|gb|EGA41338.1| hypothetical protein SEEM8283_13285 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261862|gb|EGA45429.1| hypothetical protein SEEM8284_05562 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266082|gb|EGA49573.1| hypothetical protein SEEM8285_00020 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268626|gb|EGA52093.1| hypothetical protein SEEM8287_06807 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323974955|gb|EGB70065.1| 6 ATP/GTP-binding protein [Escherichia coli TW10509] Length = 608 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F + D Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKND 59 >gi|269219818|ref|ZP_06163672.1| putative nuclease sbcCD subunit C [Actinomyces sp. oral taxon 848 str. F0332] gi|269210723|gb|EEZ77063.1| putative nuclease sbcCD subunit C [Actinomyces sp. oral taxon 848 str. F0332] Length = 1006 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + +S F + I+F A L ++ G G GKS++ +A+ W YG + Sbjct: 1 MRLRRLTVSGIGPFADTFSIDFDALTAGGLFLLEGPTGSGKSTIIDAVVWALYGGVAGGR 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DSTDARMRS 69 >gi|256005357|ref|ZP_05430322.1| SMC domain protein [Clostridium thermocellum DSM 2360] gi|255990676|gb|EEU00793.1| SMC domain protein [Clostridium thermocellum DSM 2360] gi|316940302|gb|ADU74336.1| Rad50 zinc hook domain protein [Clostridium thermocellum DSM 1313] Length = 483 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I I +F+ + ++ F+D L ++ G + GKS++ AI+W+ Y G Sbjct: 1 MITIKRIRIENFQSHKD-TELSFSDGLNVIVGPSDQGKSAIIRAIKWVLYNEP----RGT 55 Query: 86 SIKKRSIKTPM 96 ++ + Sbjct: 56 DFIRQGTNSAR 66 >gi|221057175|ref|XP_002259725.1| chromosome condensation protein [Plasmodium knowlesi strain H] gi|193809797|emb|CAQ40501.1| chromosome condensation protein, putative [Plasmodium knowlesi strain H] Length = 1485 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ ++ ++ I F + + G NG GKS++ +A+ ++F G ++ + + Sbjct: 69 IDRLILENFKSYSGVKVIGPFYKKFSCIVGPNGSGKSNIIDAMLFVF-GRRAKKIRQNKL 127 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 + M + Q + Sbjct: 128 CDLIHSSKYSMRNEYTKVSIQFR 150 >gi|281344193|gb|EFB19777.1| hypothetical protein PANDA_012005 [Ailuropoda melanoleuca] Length = 1202 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTA 54 >gi|225452807|ref|XP_002278154.1| PREDICTED: similar to ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3); ATP binding [Vitis vinifera] Length = 1568 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 316 IKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 370 >gi|255587856|ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis] gi|223525329|gb|EEF27966.1| Structural maintenance of chromosome, putative [Ricinus communis] Length = 1259 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 28 IKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 82 >gi|157130497|ref|XP_001661899.1| DNA repair protein rad50 [Aedes aegypti] gi|108871897|gb|EAT36122.1| DNA repair protein rad50 [Aedes aegypti] Length = 284 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +EI R F ++QKI+F LT++ GQNG GK+++ E +++ G Sbjct: 4 ISKLEIRGIRSFGVESGDVQKIKFQSPLTLIVGQNGCGKTTIIECLKYGLTG 55 >gi|25991997|gb|AAN77000.1| condensin subunit [Emericella nidulans] Length = 1179 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ +T I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEIIIDGFKSYTVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|319746166|gb|EFV98437.1| recombination protein F [Streptococcus agalactiae ATCC 13813] Length = 355 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + H+R + E +++F+ +L I G+N GK++ EAI +L + R + Sbjct: 1 MWIKNISLKHYRNY-EEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|295837754|ref|ZP_06824687.1| RecF protein [Streptomyces sp. SPB74] gi|295826659|gb|EFG64967.1| RecF protein [Streptomyces sp. SPB74] Length = 300 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + E ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSY-ERAEVSLGPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|159035678|ref|YP_001534931.1| recombination protein F [Salinispora arenicola CNS-205] gi|189039637|sp|A8LVH1|RECF_SALAI RecName: Full=DNA replication and repair protein recF gi|157914513|gb|ABV95940.1| DNA replication and repair protein RecF [Salinispora arenicola CNS-205] Length = 376 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ ++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGANVLVGHNGVGKTNLIEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRC 105 + + AV RC Sbjct: 60 LVRMGAGA------AVIRC 72 >gi|77407728|ref|ZP_00784483.1| DNA replication and repair protein RecF [Streptococcus agalactiae COH1] gi|77173727|gb|EAO76841.1| DNA replication and repair protein RecF [Streptococcus agalactiae COH1] Length = 369 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + H+R + E +++F+ +L I G+N GK++ EAI +L + R + Sbjct: 1 MWIKNISLKHYRNY-EEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|76787191|ref|YP_330704.1| recombination protein F [Streptococcus agalactiae A909] gi|77406514|ref|ZP_00783567.1| DNA replication and repair protein RecF [Streptococcus agalactiae H36B] gi|77411774|ref|ZP_00788110.1| DNA replication and repair protein RecF [Streptococcus agalactiae CJB111] gi|97180994|sp|Q3JYE9|RECF_STRA1 RecName: Full=DNA replication and repair protein recF gi|76562248|gb|ABA44832.1| DNA replication and repair protein RecF [Streptococcus agalactiae A909] gi|77162165|gb|EAO73140.1| DNA replication and repair protein RecF [Streptococcus agalactiae CJB111] gi|77174886|gb|EAO77702.1| DNA replication and repair protein RecF [Streptococcus agalactiae H36B] Length = 369 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + H+R + E +++F+ +L I G+N GK++ EAI +L + R + Sbjct: 1 MWIKNISLKHYRNY-EEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|125973461|ref|YP_001037371.1| SMC protein-like protein [Clostridium thermocellum ATCC 27405] gi|125713686|gb|ABN52178.1| SMC protein-like protein [Clostridium thermocellum ATCC 27405] Length = 483 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I I +F+ + ++ F+D L ++ G + GKS++ AI+W+ Y G Sbjct: 1 MITIKRIRIENFQSHKD-TELSFSDGLNVIVGPSDQGKSAIIRAIKWVLYNEP----RGT 55 Query: 86 SIKKRSIKTPM 96 ++ + Sbjct: 56 DFIRQGTNSAR 66 >gi|22538290|ref|NP_689141.1| recombination protein F [Streptococcus agalactiae 2603V/R] gi|25012150|ref|NP_736545.1| recombination protein F [Streptococcus agalactiae NEM316] gi|77413654|ref|ZP_00789839.1| DNA replication and repair protein RecF [Streptococcus agalactiae 515] gi|51316463|sp|Q8DWQ8|RECF_STRA5 RecName: Full=DNA replication and repair protein recF gi|51316464|sp|Q8E2K7|RECF_STRA3 RecName: Full=DNA replication and repair protein recF gi|22535205|gb|AAN01014.1|AE014289_14 recF protein [Streptococcus agalactiae 2603V/R] gi|24413694|emb|CAD47774.1| Unknown [Streptococcus agalactiae NEM316] gi|77160309|gb|EAO71435.1| DNA replication and repair protein RecF [Streptococcus agalactiae 515] Length = 369 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + H+R + E +++F+ +L I G+N GK++ EAI +L + R + Sbjct: 1 MWIKNISLKHYRNY-EEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|260912771|ref|ZP_05919257.1| recombination protein F [Pasteurella dagmatis ATCC 43325] gi|260633149|gb|EEX51314.1| recombination protein F [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +FR T +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLIENFRNLTA-VDLEFDRGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S + P Sbjct: 60 II--SYEQP 66 >gi|218960817|ref|YP_001740592.1| hypothetical protein CLOAM0487 [Candidatus Cloacamonas acidaminovorans] gi|167729474|emb|CAO80385.1| conserved hypothetical protein [Candidatus Cloacamonas acidaminovorans] Length = 629 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 LL ++I++FR + + ++ F L ++ G+N GKS++ +A+ ++ + Sbjct: 1 MYLLKLKITNFRKYGDPGLEVIFNQGLNVLIGENESGKSTIIDAVRYILNTQSYEYIR 58 >gi|159905715|ref|YP_001549377.1| SMC domain-containing protein [Methanococcus maripaludis C6] gi|159887208|gb|ABX02145.1| SMC domain protein [Methanococcus maripaludis C6] Length = 993 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++ +FR I F +T + GQNG GKSS+ +A+ + + +++ Sbjct: 3 IKNIKMENFRSHR-NTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGSNFRIENLM 61 Query: 89 KRS 91 ++ Sbjct: 62 QQG 64 >gi|90579612|ref|ZP_01235421.1| hypothetical protein VAS14_01581 [Vibrio angustum S14] gi|90439186|gb|EAS64368.1| hypothetical protein VAS14_01581 [Vibrio angustum S14] Length = 579 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ + +++FR F + Q IEFA +T++ G N GKS++ A+ +L Sbjct: 1 MKITKLSLTNFRSFKQTQTIEFAP-VTLLFGPNSVGKSTVLMALFYL 46 >gi|296118606|ref|ZP_06837184.1| RecF protein [Corynebacterium ammoniagenes DSM 20306] gi|295968505|gb|EFG81752.1| RecF protein [Corynebacterium ammoniagenes DSM 20306] Length = 418 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ FR +TE+ K++ + + G+NG+GK+++ EA+ ++ + + R Sbjct: 1 MYIRELDLRDFRSWTEL-KLDLDPGIVLFVGRNGFGKTNIVEALGYVAHLSSHRVNQDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + ++ + AV Sbjct: 60 LVRQGTASARVSATAV 75 >gi|158422835|ref|YP_001524127.1| putative GTP-binding protein [Azorhizobium caulinodans ORS 571] gi|158329724|dbj|BAF87209.1| putative GTP-binding protein [Azorhizobium caulinodans ORS 571] Length = 874 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKH 83 ++ + I +FR F ++ F+D L +V N GKS++ EA+ + Y + Sbjct: 1 MRIRRLSIENFRKFRAPVVLDGFSDGLNLVCEPNESGKSTVLEALRAALFERYNSKSGR 59 >gi|25026560|ref|NP_736614.1| recombination protein F [Corynebacterium efficiens YS-314] gi|259508308|ref|ZP_05751208.1| RecF protein [Corynebacterium efficiens YS-314] gi|51316473|sp|Q8FUL4|RECF_COREF RecName: Full=DNA replication and repair protein recF gi|23491839|dbj|BAC16814.1| putative DNA replication and repair protein RecF [Corynebacterium efficiens YS-314] gi|259164126|gb|EEW48680.1| RecF protein [Corynebacterium efficiens YS-314] Length = 398 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +E+ FR + E+ K+E +TI G+NG+GK+++ EAI +L + + R Sbjct: 1 MYIRSLELRDFRSWPEL-KVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHR 53 >gi|294790226|ref|ZP_06755384.1| RecF protein [Scardovia inopinata F0304] gi|294458123|gb|EFG26476.1| RecF protein [Scardovia inopinata F0304] Length = 422 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R + I+ D + ++ G NG GK+++ EAIE+L + R Sbjct: 1 MYISRLALDHYRSWN-TCLIDLTDSVNVLYGHNGLGKTNIVEAIEFLSTSSSHRVNSSQP 59 Query: 87 IKKRSIKT 94 + +R K Sbjct: 60 LIQRGYKQ 67 >gi|229015409|ref|ZP_04172415.1| DNA replication and repair protein recF [Bacillus cereus AH1273] gi|229026933|ref|ZP_04183256.1| DNA replication and repair protein recF [Bacillus cereus AH1272] gi|228734391|gb|EEL85062.1| DNA replication and repair protein recF [Bacillus cereus AH1272] gi|228745888|gb|EEL95884.1| DNA replication and repair protein recF [Bacillus cereus AH1273] Length = 375 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFITEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|183602670|ref|ZP_02964034.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis HN019] gi|219682502|ref|YP_002468885.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis AD011] gi|241190069|ref|YP_002967463.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195475|ref|YP_002969030.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218088|gb|EDT88735.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis HN019] gi|219620152|gb|ACL28309.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis AD011] gi|240248461|gb|ACS45401.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250029|gb|ACS46968.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177772|gb|ADC85018.1| RecF [Bifidobacterium animalis subsp. lactis BB-12] gi|295793056|gb|ADG32591.1| recombination protein RecF [Bifidobacterium animalis subsp. lactis V9] Length = 475 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + + HFR +T ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MITVSRLALDHFRSWTNCV-LDFKPGVNILEGPNGLGKTNIVEALEVLSTGSSHR 54 >gi|302533182|ref|ZP_07285524.1| exonuclease [Streptomyces sp. C] gi|302442077|gb|EFL13893.1| exonuclease [Streptomyces sp. C] Length = 672 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L + I+ F F E Q I+F + +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLHITAFGPFAEPQTIDFDALSGAGIFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|170048005|ref|XP_001851491.1| structural maintenance of chromosomes smc2 [Culex quinquefasciatus] gi|167870242|gb|EDS33625.1| structural maintenance of chromosomes smc2 [Culex quinquefasciatus] Length = 1178 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + + ++ F + G NG GKS++ ++I ++ Sbjct: 1 MYIKSIIIDGFKSYGKRTEVHGFDPEFNAITGLNGTGKSNILDSICFVLGISNLVHVRAT 60 Query: 86 SIKKRSIKT 94 S+++ K+ Sbjct: 61 SLQELVYKS 69 >gi|159037132|ref|YP_001536385.1| SMC domain-containing protein [Salinispora arenicola CNS-205] gi|157915967|gb|ABV97394.1| SMC domain protein [Salinispora arenicola CNS-205] Length = 824 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F I+F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDLAGFTVFRAPTTIDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|113475400|ref|YP_721461.1| recombination protein F [Trichodesmium erythraeum IMS101] gi|123352421|sp|Q114T6|RECF_TRIEI RecName: Full=DNA replication and repair protein recF gi|110166448|gb|ABG50988.1| DNA replication and repair protein RecF [Trichodesmium erythraeum IMS101] Length = 390 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + Q+++F TI+ G N GKS+L E++E L + R Sbjct: 1 MYLKHLHLRQFRNYRD-QQVKFDGAKTILLGDNAQGKSNLLESVELLSTLKSHRAIRDRD 59 Query: 87 IKKRSIKTPM 96 + S + Sbjct: 60 LILDSKQASK 69 >gi|241952042|ref|XP_002418743.1| component of condensin complex, putative; structural maintenance of chromosome 2 homologue, putative [Candida dubliniensis CD36] gi|223642082|emb|CAX44048.1| component of condensin complex, putative [Candida dubliniensis CD36] Length = 1172 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVDELIIDGFKSYAVRTVISNWDAQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|213408381|ref|XP_002174961.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212003008|gb|EEB08668.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 1173 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ Sbjct: 1 MKIEELIIDGFKSYAVRTVISGWDSQFNAITGLNGSGKSNILDAICFVLGITNMHTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|170289089|ref|YP_001739327.1| SMC domain-containing protein [Thermotoga sp. RQ2] gi|170176592|gb|ACB09644.1| SMC domain protein [Thermotoga sp. RQ2] Length = 852 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F G + IEF +T+V G NG GKSSL EAI + +G R Sbjct: 1 MRPERLTVRNFLGL-KNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIR 53 >gi|151941253|gb|EDN59631.1| structural maintenance of chromosomes [Saccharomyces cerevisiae YJM789] Length = 1418 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVF-GFRANKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|150402511|ref|YP_001329805.1| SMC domain-containing protein [Methanococcus maripaludis C7] gi|150033541|gb|ABR65654.1| SMC domain protein [Methanococcus maripaludis C7] Length = 993 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR I F +T + GQNG GKSS+ +A+ + + +++ Sbjct: 3 IKTIKMENFRSHR-NTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGSNFRIENLM 61 Query: 89 KRS 91 ++ Sbjct: 62 QQG 64 >gi|323347562|gb|EGA81830.1| Smc4p [Saccharomyces cerevisiae Lalvin QA23] Length = 1418 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVF-GFRANKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|282858458|ref|ZP_06267637.1| putative DNA sulfur modification protein DndD [Prevotella bivia JCVIHMP010] gi|282588774|gb|EFB93900.1| putative DNA sulfur modification protein DndD [Prevotella bivia JCVIHMP010] Length = 704 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +IE+++FR + KIE F D L IV+G NG+GK++ ++ W YG + Sbjct: 1 MTIREIELNNFRIYKGKNKIELFPDGNRNLIIVSGNNGFGKTTFLMSLVWCLYGKNMGKV 60 Query: 83 HGDSIKKRSIKTP 95 D + ++ I Sbjct: 61 --DELYRKEIDEK 71 >gi|255716126|ref|XP_002554344.1| KLTH0F03058p [Lachancea thermotolerans] gi|238935727|emb|CAR23907.1| KLTH0F03058p [Lachancea thermotolerans] Length = 1298 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F E + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNERETIEFGKPLTLIVGTNGSGKTTIIECLKYATTG 53 >gi|238496327|ref|XP_002379399.1| nuclear condensin complex subunit Smc2, putative [Aspergillus flavus NRRL3357] gi|220694279|gb|EED50623.1| nuclear condensin complex subunit Smc2, putative [Aspergillus flavus NRRL3357] Length = 1179 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|115398574|ref|XP_001214876.1| hypothetical protein ATEG_05698 [Aspergillus terreus NIH2624] gi|114191759|gb|EAU33459.1| hypothetical protein ATEG_05698 [Aspergillus terreus NIH2624] Length = 1444 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F + + G Sbjct: 242 ITTLVLMNFKSYAGKQVVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQG 298 >gi|190406122|gb|EDV09389.1| structural maintenance of chromosome 4 [Saccharomyces cerevisiae RM11-1a] Length = 1418 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVF-GFRANKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|296137755|ref|YP_003644998.1| DNA replication and repair protein RecF [Tsukamurella paurometabola DSM 20162] gi|296025889|gb|ADG76659.1| DNA replication and repair protein RecF [Tsukamurella paurometabola DSM 20162] Length = 401 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + IE +T+ G+NG+GK++L EA+ +L + R Sbjct: 1 MYVRRLRLHDFRSW-DDVDIELGPGVTVFVGRNGFGKTNLIEALNYLATLGSHRVSTDQP 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 LIRVGTES 67 >gi|238883729|gb|EEQ47367.1| structural maintenance of chromosome 2 [Candida albicans WO-1] Length = 1171 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVDELIIDGFKSYAVRTVISNWDAQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|307707884|ref|ZP_07644361.1| DNA replication and repair protein RecF [Streptococcus mitis NCTC 12261] gi|307616144|gb|EFN95340.1| DNA replication and repair protein RecF [Streptococcus mitis NCTC 12261] Length = 365 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L I G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNIFLGRNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|222622120|gb|EEE56252.1| hypothetical protein OsJ_05274 [Oryza sativa Japonica Group] Length = 1061 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVVEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|156848089|ref|XP_001646927.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM 70294] gi|156117609|gb|EDO19069.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM 70294] Length = 1305 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATTG 53 >gi|149174927|ref|ZP_01853551.1| hypothetical protein PM8797T_11144 [Planctomyces maris DSM 8797] gi|148846264|gb|EDL60603.1| hypothetical protein PM8797T_11144 [Planctomyces maris DSM 8797] Length = 1277 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 29 LLDIEISHFRGFT---EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L D+ FRG E F ++ G NG GK+SL A+ W+ G + Sbjct: 101 LADLTCKSFRGIAPAGEKVHFSFDTKSNLIYGPNGSGKTSLLGAVIWVLTGSAISDANDT 160 Query: 86 S 86 S Sbjct: 161 S 161 >gi|148270285|ref|YP_001244745.1| SMC domain-containing protein [Thermotoga petrophila RKU-1] gi|281412591|ref|YP_003346670.1| SMC domain protein [Thermotoga naphthophila RKU-10] gi|147735829|gb|ABQ47169.1| SMC domain protein [Thermotoga petrophila RKU-1] gi|281373694|gb|ADA67256.1| SMC domain protein [Thermotoga naphthophila RKU-10] Length = 852 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F G + IEF +T+V G NG GKSSL EAI + +G R Sbjct: 1 MRPERLTVRNFLGL-KNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIR 53 >gi|169775035|ref|XP_001821985.1| structural maintenance of chromosomes protein 2 [Aspergillus oryzae RIB40] gi|83769848|dbj|BAE59983.1| unnamed protein product [Aspergillus oryzae] Length = 1179 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|13541058|ref|NP_110746.1| chromosome segregation protein [Thermoplasma volcanium GSS1] gi|18202324|sp|P58302|RAD50_THEVO RecName: Full=DNA double-strand break repair rad50 ATPase gi|14324442|dbj|BAB59370.1| purine NTPase [Thermoplasma volcanium GSS1] Length = 895 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F ++ I F + ++ GQNG GKSS+ +AI + + + R+ D IK Sbjct: 3 IERIRLRNFLSHSDSD-IYFDTGINMIIGQNGAGKSSIVDAIRFALFSDKRTRRTEDMIK 61 Query: 89 KRSIKTPMPM 98 K + + Sbjct: 62 KGERYMEVEL 71 >gi|68483159|ref|XP_714514.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|68483260|ref|XP_714465.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46436033|gb|EAK95403.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46436089|gb|EAK95458.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] Length = 1171 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MKVDELIIDGFKSYAVRTVISNWDAQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|172038222|ref|YP_001804723.1| hypothetical protein cce_3309 [Cyanothece sp. ATCC 51142] gi|171699676|gb|ACB52657.1| unknown [Cyanothece sp. ATCC 51142] Length = 688 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I++ +FR F +I A ++ TI++G NG GK++L A W+ Y Sbjct: 1 MKLLSIKLCNFRQFYGQTPEISLACGKENTTIIHGNNGSGKTTLLNAFTWVLYE 54 >gi|74095927|ref|NP_001027798.1| SMC3 protein [Takifugu rubripes] gi|54792531|emb|CAD58849.3| SMC3 protein [Takifugu rubripes] Length = 1217 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|294496879|ref|YP_003560579.1| DNA replication and repair protein RecF [Bacillus megaterium QM B1551] gi|295702246|ref|YP_003595321.1| DNA replication and repair protein RecF [Bacillus megaterium DSM 319] gi|294346816|gb|ADE67145.1| DNA replication and repair protein RecF [Bacillus megaterium QM B1551] gi|294799905|gb|ADF36971.1| DNA replication and repair protein RecF [Bacillus megaterium DSM 319] Length = 372 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I ++++R +T I F + + ++ G+N GK+++ E+I L + R + Sbjct: 1 MYIKEITLTNYRNYT-KTTIPFENKVNVILGENAQGKTNVMESIFVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|6323115|ref|NP_013187.1| Smc4p [Saccharomyces cerevisiae S288c] gi|29427672|sp|Q12267|SMC4_YEAST RecName: Full=Structural maintenance of chromosomes protein 4 gi|1256888|gb|AAB67590.1| Ylr086wp [Saccharomyces cerevisiae] gi|1360455|emb|CAA97646.1| unnamed protein product [Saccharomyces cerevisiae] gi|285813506|tpg|DAA09402.1| TPA: Smc4p [Saccharomyces cerevisiae S288c] Length = 1418 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVF-GFRANKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|323450369|gb|EGB06251.1| hypothetical protein AURANDRAFT_72033 [Aureococcus anophagefferens] Length = 2222 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + ++I F + + G NG GKS++ +A+ ++F G ++ + + Sbjct: 851 IEKMVLENFKSYGGQREIGPFHKRFSSIVGPNGSGKSNVIDAMLFVF-GKRAKKLRLNKV 909 Query: 88 KKRSIKT 94 + K+ Sbjct: 910 SELIHKS 916 >gi|91791170|ref|YP_552120.1| hypothetical protein Bpro_5366 [Polaromonas sp. JS666] gi|91701051|gb|ABE47222.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 892 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + FRGF + + + + G NG GK+SL E +E+ G + Sbjct: 85 RLRHLTLGPFRGFRTPEPFDLQKRVILFYGPNGSGKTSLCEGLEYALLGSVEE 137 >gi|291297542|ref|YP_003508820.1| DNA replication and repair protein RecF [Stackebrandtia nassauensis DSM 44728] gi|290566762|gb|ADD39727.1| DNA replication and repair protein RecF [Stackebrandtia nassauensis DSM 44728] Length = 378 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E++ FR + +E + ++ G NG+GK++L E++ +L G + R Sbjct: 1 MHVRRLELTDFRSYG-HVDVELPEGPSVFVGPNGHGKTNLIESLGYLATGSSHRVTSDAP 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 LVRAGCES 67 >gi|256826561|ref|YP_003150520.1| DNA repair ATPase [Cryptobacterium curtum DSM 15641] gi|256582704|gb|ACU93838.1| ATPase involved in DNA repair [Cryptobacterium curtum DSM 15641] Length = 953 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L +E+ F + + I+F+ + ++ G G GK++L +A+++ +G + Sbjct: 1 MRPLSLELCAFGPYADRVFIDFSLFGESGVFLICGPTGSGKTTLFDAMKFALFGEASGTR 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|325283607|ref|YP_004256148.1| SMC domain-containing protein [Deinococcus proteolyticus MRP] gi|324315416|gb|ADY26531.1| SMC domain protein [Deinococcus proteolyticus MRP] Length = 923 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + +S F F + +++F L V G G GKSSL +A+ + YG T R Sbjct: 1 MRPLHMTLSGFTAFRQHTELDFEGLDLFAVVGPTGSGKSSLLDAMTFALYGQTAR 55 >gi|224140989|ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa] gi|222866861|gb|EEF03992.1| condensin complex components subunit [Populus trichocarpa] Length = 1256 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 33 IKEMIMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 87 >gi|242007208|ref|XP_002424434.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212507834|gb|EEB11696.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1186 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + +I F + G NG GKS++ +AI ++ + Sbjct: 1 MFVKSIVIDGFKSYGRRTEISGFDREFNAITGLNGSGKSNILDAICFVLGLQNLGQVRAT 60 Query: 86 SIKKRSIKT 94 ++ K Sbjct: 61 LLQDLVYKQ 69 >gi|115352110|ref|YP_773949.1| chromosome segregation protein SMC [Burkholderia ambifaria AMMD] gi|115282098|gb|ABI87615.1| chromosome segregation protein SMC [Burkholderia ambifaria AMMD] Length = 1142 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%) Query: 55 VNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + G NG GKS++ +A+ W+ G+S++ Sbjct: 1 MVGPNGCGKSNIIDAVRWVLGESRASELRGESMQD 35 >gi|315124282|ref|YP_004066286.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018004|gb|ADT66097.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 168 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K++ ++I +FR + ++F D LT G+N GKS++ EA++ F G + D Sbjct: 1 MKIIQVKIKNFRSYANEVIVDFED-LTAFVGKNDIGKSTILEALDIFFDGGVIKIDKNDI 59 Query: 87 IKKRSIKTPMPMCMAV 102 K+ + ++V Sbjct: 60 NKECVKNGDNEIQISV 75 >gi|242013505|ref|XP_002427445.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212511831|gb|EEB14707.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1302 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + ++Q++ F + T + G NG GKS++ +++ ++F GY + I Sbjct: 86 ITHIVNENFKSYADVQELGPFHKYFTAIIGPNGSGKSNVIDSMLFVF-GYRASKLRSKKI 144 Query: 88 KKRSIKTP 95 +P Sbjct: 145 SALLHDSP 152 >gi|319785623|ref|YP_004145098.1| DNA replication and repair protein RecF [Pseudoxanthomonas suwonensis 11-1] gi|317464135|gb|ADV25867.1| DNA replication and repair protein RecF [Pseudoxanthomonas suwonensis 11-1] Length = 376 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR F E +E + ++ G NG GK+S+ EA+ + YG + R + D Sbjct: 1 MRVTRLQLRDFRRFHE-TGLEPGPGVNLILGANGAGKTSVLEALHLMAYGRSFRGRVRDG 59 Query: 87 IKKRS 91 + + S Sbjct: 60 LVRES 64 >gi|291549800|emb|CBL26062.1| ATPase involved in DNA repair [Ruminococcus torques L2-14] Length = 877 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +S F + +Q+I+F L ++ G G GK+++ +AI + Y T + Sbjct: 1 MRPVRLTMSAFGSYAGVQEIDFTKIHSGLFLITGDTGAGKTTIFDAIMYALYDRTSGGRR 60 Query: 84 GDSIKKRSIKTP 95 ++ + + Sbjct: 61 DGNMMRSQYASE 72 >gi|289449549|ref|YP_003474443.1| putative DNA replication and repair protein RecF [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184096|gb|ADC90521.1| putative DNA replication and repair protein RecF [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 382 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ +FR + + F + + G NG GK++L EAI G + R + Sbjct: 3 INKLELENFRNY-DHLTASFIPEINVFYGFNGQGKTNLLEAIYLCTCGRSHRTSRDADLI 61 Query: 89 KRSIKTPMPMCMAVPRCKY 107 K + +P+ +Y Sbjct: 62 KFEQLHYQVLIEFIPQDEY 80 >gi|121998015|ref|YP_001002802.1| DNA replication and repair protein RecF [Halorhodospira halophila SL1] gi|121589420|gb|ABM62000.1| DNA replication and repair protein RecF [Halorhodospira halophila SL1] Length = 349 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ FR + ++ HL +V G NG GK+SL EAI +L + R + D + Sbjct: 1 MERLEVHGFRNLAD-TQLRPHPHLNVVTGPNGAGKTSLLEAIYFLSRVRSFRTRQNDRLI 59 Query: 89 KRSIKTPM 96 + Sbjct: 60 GWGAEEAR 67 >gi|239942667|ref|ZP_04694604.1| recombination protein F [Streptomyces roseosporus NRRL 15998] gi|239989126|ref|ZP_04709790.1| recombination protein F [Streptomyces roseosporus NRRL 11379] gi|291446128|ref|ZP_06585518.1| recombination protein F [Streptomyces roseosporus NRRL 15998] gi|291349075|gb|EFE75979.1| recombination protein F [Streptomyces roseosporus NRRL 15998] Length = 376 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGITAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|312965417|ref|ZP_07779649.1| putative exonuclease [Escherichia coli 2362-75] gi|312289837|gb|EFR17725.1| putative exonuclease [Escherichia coli 2362-75] gi|323159374|gb|EFZ45359.1| ATP-dependent exoDNAse [Escherichia coli E128010] Length = 653 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I++ +FR F E+ ++ F + LTI+ G NG GK+++ +A+ LF + +R Sbjct: 1 MKIEKIKLQNFRCFGHEVVELNFEEELTILVGGNGSGKTAVLQAVSRLFGTTSAQR 56 >gi|188535876|ref|YP_001905936.1| Predicted ATP-dependent endonuclease of the OLD family [Erwinia tasmaniensis Et1/99] gi|188027180|emb|CAO95007.1| Predicted ATP-dependent endonuclease of the OLD family [Erwinia tasmaniensis Et1/99] Length = 608 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 29/44 (65%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I++++FRG+ +I + +T + G+N +GKS++ EA+ Sbjct: 1 MRLKKIKLTNFRGYRNTIEIPVDEAMTGIVGRNDFGKSTILEAL 44 >gi|15612567|ref|NP_240870.1| recombination protein F [Bacillus halodurans C-125] gi|13959499|sp|Q9RC99|RECF_BACHD RecName: Full=DNA replication and repair protein recF gi|5672650|dbj|BAA82688.1| 63%-identity [Bacillus halodurans] gi|10172616|dbj|BAB03723.1| DNA repair and genetic recombination [Bacillus halodurans C-125] Length = 371 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + + F ++ ++ G+N GK+++ EAI +L + R Sbjct: 1 MHIERLTLKQFRNY-DELDVSFEPNVNVIIGENAQGKTNVIEAIYFLALAKSHRTARDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIQ 62 >gi|115730842|ref|XP_786064.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115959643|ref|XP_001177541.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1247 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F+ + Q I + G NG GKS+L +AI ++ T Sbjct: 4 LKLLMLDNFKSYQGKQTIGPFKPFAAIIGPNGAGKSNLMDAISFVLGEKT 53 >gi|50288973|ref|XP_446916.1| hypothetical protein [Candida glabrata CBS 138] gi|49526225|emb|CAG59849.1| unnamed protein product [Candida glabrata] Length = 1219 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I +F+ H +V G NG GKS+ A+ ++ Sbjct: 1 MYIKRVIIKGFKTYRNETIIGDFSPHHNVVIGANGSGKSNFFAAVRFVL 49 >gi|229829521|ref|ZP_04455590.1| hypothetical protein GCWU000342_01613 [Shuttleworthia satelles DSM 14600] gi|229791952|gb|EEP28066.1| hypothetical protein GCWU000342_01613 [Shuttleworthia satelles DSM 14600] Length = 365 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+S++R + ++ +EF I+ G N GK+++ E+I + R Sbjct: 1 MYIQSIELSNYRNYRSLE-MEFDRGTNILFGDNAQGKTNILESIYLSGTSRSHRTARDRE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFGQE 66 >gi|172039683|ref|YP_001799397.1| recombination protein F [Corynebacterium urealyticum DSM 7109] gi|171850987|emb|CAQ03963.1| DNA replication and repair protein RecF [Corynebacterium urealyticum DSM 7109] Length = 472 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E+ ++ +T+ +G NG+GK+++ EA+ +L + + R + Sbjct: 1 MFVRSLELHDFRSWREL-SLQLDPGVTVFSGPNGHGKTNIVEALGYLAHLGSHRVNTDSA 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + AV Sbjct: 60 LVREGQQIARVSATAV 75 >gi|315426347|dbj|BAJ47987.1| exonuclease SbcC [Candidatus Caldiarchaeum subterraneum] Length = 758 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + +I D LT+ G+NG GKSS+ +AI + YG R ++ + + Sbjct: 2 IRRVRLFNFLSHRD-TEISLGDGLTVFIGRNGAGKSSVVDAIVYALYGRHTRGQNANIVH 60 Query: 89 KRS--IKTPMPMCMAVPRCKYQL 109 + + + + R Y++ Sbjct: 61 DGGGAQEGRVELDFELNRKLYKV 83 >gi|188584646|ref|YP_001916191.1| DNA replication and repair protein RecF [Natranaerobius thermophilus JW/NM-WN-LF] gi|226737815|sp|B2A2Y9|RECF_NATTJ RecName: Full=DNA replication and repair protein recF gi|179349333|gb|ACB83603.1| DNA replication and repair protein RecF [Natranaerobius thermophilus JW/NM-WN-LF] Length = 386 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++ + +FR ++ K+ F + + G N GK++L EAI +L G + R + Sbjct: 1 MKLTELCLKNFRNYS-NLKLNFKKPIILFFGANAQGKTNLLEAIYYLATGKSHRAQKEKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|50304743|ref|XP_452327.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641460|emb|CAH01178.1| KLLA0C02915p [Kluyveromyces lactis] Length = 1296 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGTNGSGKTTIIECLKYATTG 53 >gi|315426880|dbj|BAJ48500.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 584 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDS 86 + ++ + +F E +I L ++ G NG GKSS+ AI YT+R + Sbjct: 12 YIREVILENFMSH-EYSRIPLRRGLNVIVGPNGAGKSSILLAISVALGQTYTERGQRLAD 70 Query: 87 IKKRSIKTPM 96 + +R ++ Sbjct: 71 LIRRGYESAR 80 >gi|297475488|ref|XP_002688026.1| PREDICTED: structural maintenance of chromosomes 1B [Bos taurus] gi|296486908|gb|DAA29021.1| structural maintenance of chromosomes 1B [Bos taurus] Length = 1235 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 3 RLEVLFVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|225574556|ref|ZP_03783166.1| hypothetical protein RUMHYD_02633 [Blautia hydrogenotrophica DSM 10507] gi|225038243|gb|EEG48489.1| hypothetical protein RUMHYD_02633 [Blautia hydrogenotrophica DSM 10507] Length = 1441 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + IS F + + ++I+F L ++ G G GK+++ +AI + YG Sbjct: 1 MRPERLIISAFGPYAQREEIDFRRLGGHGLYLITGDTGAGKTTIFDAITFALYGEASGEV 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RESGMFRSKY 70 >gi|193210872|ref|NP_499453.3| SMC (structural maintenance of chromosomes) family member (smc-3) [Caenorhabditis elegans] gi|154147369|emb|CAB57898.4| C. elegans protein Y47D3A.26, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1205 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++ I+ FR + + + F+ +V G+NG GKS+ AI+++ Sbjct: 1 MKIKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVL 49 >gi|27227805|emb|CAD59411.1| SMC3 protein [Oryza sativa] Length = 1205 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKQVVIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|41052610|dbj|BAD08002.1| putative SMC3 protein [Oryza sativa Japonica Group] gi|42408824|dbj|BAD10084.1| putative SMC3 protein [Oryza sativa Japonica Group] Length = 1223 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ + E E F+ + +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVVVEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVL 49 >gi|255102286|ref|ZP_05331263.1| DNA sulfur modification protein DndD [Clostridium difficile QCD-63q42] Length = 719 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ + + +FR + E ++ ++ G+NG GKS++ EAI+ YG + Sbjct: 1 MKINKLVLKNFRSYEEETTFNLNTTSDKNIILIGGKNGAGKSTIFEAIKLCIYGPMAYKY 60 Query: 83 HG 84 G Sbjct: 61 QG 62 >gi|156085962|ref|XP_001610390.1| structural maintenance of chromosome 1-like protein [Babesia bovis T2Bo] gi|154797643|gb|EDO06822.1| structural maintenance of chromosome 1-like protein, putative [Babesia bovis] Length = 1328 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F+ + ++ T + G NG GKS++ +AI ++ + G +++ Sbjct: 70 VTTLVLHNFKSYGGTVRVSDFKKFTAIIGPNGSGKSNIMDAISFVLCVNSTV-LRGLNLR 128 Query: 89 KRSIKTPM 96 K Sbjct: 129 DLIHKPSK 136 >gi|14521425|ref|NP_126901.1| chromosome segregation protein [Pyrococcus abyssi GE5] gi|18203527|sp|Q9UZC8|RAD50_PYRAB RecName: Full=DNA double-strand break repair rad50 ATPase gi|5458643|emb|CAB50131.1| Rad50 purine ntpase [Pyrococcus abyssi GE5] Length = 880 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 K+ ++++ +FR E + F + ++ GQNG GKSSL +AI Y + R G Sbjct: 1 MKIEEVKVYNFRSH-EETVVRFRKGINLIIGQNGSGKSSLLDAILVGLYWSKKLRLRGLK 59 Query: 85 -DSIKKRSIK 93 D ++ K Sbjct: 60 KDEFRRIGGK 69 >gi|319941628|ref|ZP_08015952.1| ATP/GTP-binding protein [Sutterella wadsworthensis 3_1_45B] gi|319804858|gb|EFW01712.1| ATP/GTP-binding protein [Sutterella wadsworthensis 3_1_45B] Length = 511 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ ++I +FRG+ + ++F D+LT++ G+N GKS++ EA+ Sbjct: 1 MKIKSVKIKNFRGYRDEICVDF-DNLTVLIGKNDIGKSTILEAL 43 >gi|302388603|ref|YP_003824424.1| DNA replication and repair protein RecF [Thermosediminibacter oceani DSM 16646] gi|302199231|gb|ADL06801.1| DNA replication and repair protein RecF [Thermosediminibacter oceani DSM 16646] Length = 367 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + FR F E + +EF+ L ++ G NG GK++L EAI +L R Sbjct: 1 MHLTKIRLFDFRNFREAE-VEFSGGLNVLYGDNGQGKTNLLEAIHFLCNLRPVRTTREQD 59 Query: 87 IK 88 + Sbjct: 60 VI 61 >gi|227876544|ref|ZP_03994655.1| recombination protein F [Mobiluncus mulieris ATCC 35243] gi|227842858|gb|EEJ53056.1| recombination protein F [Mobiluncus mulieris ATCC 35243] Length = 436 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + ++ I + + G NG GK++L EA+ +L T R + + Sbjct: 1 MFVTNLALDWFRSYRQLV-ISLEPGVNVFLGANGQGKTNLVEALNYLAVLSTHRAGNDAA 59 Query: 87 IKKRSIKTPMP 97 + R P Sbjct: 60 LIFRGTPEETP 70 >gi|115384568|ref|XP_001208831.1| hypothetical protein ATEG_01466 [Aspergillus terreus NIH2624] gi|114196523|gb|EAU38223.1| hypothetical protein ATEG_01466 [Aspergillus terreus NIH2624] Length = 1179 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRITEIVIDGFKSYAVRTVIGGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|260948944|ref|XP_002618769.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720] gi|238848641|gb|EEQ38105.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720] Length = 1277 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS R F T+ + I+F LT++ GQNG GK+++ E +++ G Sbjct: 4 LYKLSISGIRSFSPTDHETIQFGTPLTLICGQNGCGKTTIIECLKYATTG 53 >gi|296082911|emb|CBI22212.3| unnamed protein product [Vitis vinifera] Length = 1253 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F G ++ Sbjct: 30 IKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF-GKRAKQMR 84 >gi|260438583|ref|ZP_05792399.1| putative ATP binding protein [Butyrivibrio crossotus DSM 2876] gi|292809174|gb|EFF68379.1| putative ATP binding protein [Butyrivibrio crossotus DSM 2876] Length = 438 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-----EWLFY--GYTQ 79 KL +I+I ++R F + I+F +++T++ G+NG GK+++ +A+ +L G Sbjct: 1 MKLKNIKIENYRCF-KRADIDFDENITLIVGKNGAGKTAILDAVAVAVSTFLLGIDGGVS 59 Query: 80 RRKHGDSIKKRSIK 93 R D + Sbjct: 60 RGILKDDARYEFYD 73 >gi|303315129|ref|XP_003067572.1| Chromosome segregation protein sudA , putative [Coccidioides posadasii C735 delta SOWgp] gi|240107242|gb|EER25427.1| Chromosome segregation protein sudA , putative [Coccidioides posadasii C735 delta SOWgp] Length = 1199 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|228911332|ref|ZP_04075136.1| DNA replication and repair protein recF [Bacillus thuringiensis IBL 200] gi|228848350|gb|EEM93200.1| DNA replication and repair protein recF [Bacillus thuringiensis IBL 200] Length = 375 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISKIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|167622462|ref|YP_001672756.1| DNA repair ATPase-like protein [Shewanella halifaxensis HAW-EB4] gi|167352484|gb|ABZ75097.1| ATPase involved in DNA repair-like protein [Shewanella halifaxensis HAW-EB4] Length = 1043 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +EI FR + +F + + + NG+GKSS +A+EW + Sbjct: 1 MKIKKVEIEAFRAYKSKSDGTFDFTNQGDIPSNFVAIYAPNGFGKSSFYDAVEWAVTNHL 60 Query: 79 QR 80 +R Sbjct: 61 ER 62 >gi|157691778|ref|YP_001486240.1| DNA repair exonuclease subunit C [Bacillus pumilus SAFR-032] gi|157680536|gb|ABV61680.1| DNA repair exonuclease subunit C [Bacillus pumilus SAFR-032] Length = 1131 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F+ + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPITLTIKGLHSFREEQTIDFSSLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAL 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|119190459|ref|XP_001245836.1| hypothetical protein CIMG_05277 [Coccidioides immitis RS] gi|320035654|gb|EFW17595.1| chromosome segregation protein sudA [Coccidioides posadasii str. Silveira] Length = 1199 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 49 >gi|189499003|ref|YP_001958473.1| DNA replication and repair protein RecF [Chlorobium phaeobacteroides BS1] gi|226737774|sp|B3EJI1|RECF_CHLPB RecName: Full=DNA replication and repair protein recF gi|189494444|gb|ACE02992.1| DNA replication and repair protein RecF [Chlorobium phaeobacteroides BS1] Length = 363 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +I++ +FR E+ ++ +T+V G NG GK+++ EA+ + Sbjct: 1 MRLQEIQLVNFRKHKELV-FAPSEAITVVYGPNGSGKTNILEAVHYC 46 >gi|85107158|ref|XP_962321.1| hypothetical protein NCU07679 [Neurospora crassa OR74A] gi|28923924|gb|EAA33085.1| hypothetical protein NCU07679 [Neurospora crassa OR74A] Length = 1179 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVTEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|332264578|ref|XP_003281312.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1B-like [Nomascus leucogenys] Length = 1236 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNIMDALSFVMGEKIA 54 >gi|307106676|gb|EFN54921.1| hypothetical protein CHLNCDRAFT_134635 [Chlorella variabilis] Length = 1220 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ + Q + F + V G NG GKS++ +A+ ++F G ++ Sbjct: 19 ITQMVLENFKSYAGAQSVGPFHKSFSSVVGPNGSGKSNVIDAMLFVF-GKRAKQLR 73 >gi|326802620|ref|YP_004320438.1| DNA replication and repair protein RecF [Aerococcus urinae ACS-120-V-Col10a] gi|326650777|gb|AEA00960.1| DNA replication and repair protein RecF [Aerococcus urinae ACS-120-V-Col10a] Length = 372 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + ++F + + G N GK++L EAI L + R Sbjct: 1 MHLKSLYLKDFRNY-DQVTMDFDPGINVFIGDNAQGKTNLIEAIYMLSLARSHRTAKERE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRFGAD 66 >gi|123444623|ref|XP_001311080.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892876|gb|EAX98150.1| hypothetical protein TVAG_332600 [Trichomonas vaginalis G3] Length = 1292 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Query: 28 KLLDIEISHFRGFTE------IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL+ + I R F Q I F +++ ++ G NG GK+++ E++++ G +++ Sbjct: 3 KLISLTIKGIRLFNPEPKEEYKQTINFDNNIILITGPNGSGKTTIFESLQYALTGLCRKK 62 Query: 82 KHG 84 G Sbjct: 63 SAG 65 >gi|297200943|ref|ZP_06918340.1| recombination protein F [Streptomyces sviceus ATCC 29083] gi|197716886|gb|EDY60920.1| recombination protein F [Streptomyces sviceus ATCC 29083] Length = 373 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EAI +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAIGYLATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|118443917|ref|YP_879295.1| recombination protein F [Clostridium novyi NT] gi|166220706|sp|A0Q3U3|RECF_CLONN RecName: Full=DNA replication and repair protein recF gi|118134373|gb|ABK61417.1| recF protein [Clostridium novyi NT] Length = 361 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ +FR + EI ++ + + G N GK+++ E+I + G + R Sbjct: 1 MYIKNLELINFRNY-EILSLKLHSGINVFIGDNAQGKTNILESIYYCSIGKSHRTNKDKE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 LIKWGAR 66 >gi|50291227|ref|XP_448046.1| hypothetical protein [Candida glabrata CBS 138] gi|49527357|emb|CAG60997.1| unnamed protein product [Candida glabrata] Length = 1305 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|281356710|ref|ZP_06243201.1| DNA replication and repair protein RecF [Victivallis vadensis ATCC BAA-548] gi|281316837|gb|EFB00860.1| DNA replication and repair protein RecF [Victivallis vadensis ATCC BAA-548] Length = 353 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+++FR + + F+ + G NG GK++L E+I +L + R G + Sbjct: 4 IEQLELANFRSYAAG-RFRFSSSRVVFTGPNGAGKTNLLESIYFLSILRSFRTVSGRELV 62 Query: 89 KRSIK 93 + + Sbjct: 63 RIGER 67 >gi|324115018|gb|EGC08983.1| hypothetical protein ERIG_00346 [Escherichia fergusonii B253] Length = 1043 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +EI FR + +F + + + NG+GKSS +A+EW + Sbjct: 1 MKIKKVEIEAFRAYKSRSDGTFDFTNDGDVAANFVAIYAPNGFGKSSFYDAVEWAITNHM 60 Query: 79 QR 80 R Sbjct: 61 AR 62 >gi|257388937|ref|YP_003178710.1| chromosome segregation protein [Halomicrobium mukohataei DSM 12286] gi|257171244|gb|ACV49003.1| SMC domain protein [Halomicrobium mukohataei DSM 12286] Length = 891 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+ + E + +TI++G NG GKSSL EA + YG ++ D Sbjct: 1 MRISRVRMENFKCYGE-ADLRLDRGVTIIHGLNGSGKSSLLEACFFALYGTKALDENLDE 59 Query: 87 IKKRSIK 93 I Sbjct: 60 IVSIGAD 66 >gi|296125983|ref|YP_003633235.1| DNA replication and repair protein RecF [Brachyspira murdochii DSM 12563] gi|296017799|gb|ADG71036.1| DNA replication and repair protein RecF [Brachyspira murdochii DSM 12563] Length = 355 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I FR + E EF+D + ++ G NG GK+++ EA+ L G + R + + Sbjct: 3 LKELTIRSFRNYNENV-FEFSDKINVLYGHNGCGKTNILEAVYMLGNGVSFRTRLDRELV 61 Query: 89 KRSIK 93 K Sbjct: 62 KNGND 66 >gi|119961476|ref|YP_945837.1| recombination protein F [Arthrobacter aurescens TC1] gi|166220697|sp|A1R0S5|RECF_ARTAT RecName: Full=DNA replication and repair protein recF gi|119948335|gb|ABM07246.1| putative DNA replication and repair protein RecF [Arthrobacter aurescens TC1] Length = 399 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + ++ +T++ G NG GK++L EAI +L + R Sbjct: 1 MYLEHLSLTDFRSYA-QVDLKLGPGVTVLVGSNGIGKTNLMEAIGYLATLSSHRVSTDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LLRFGTE 66 >gi|307822691|ref|ZP_07652922.1| SMC domain protein [Methylobacter tundripaludum SV96] gi|307736295|gb|EFO07141.1| SMC domain protein [Methylobacter tundripaludum SV96] Length = 1147 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L+I + +I+F + + G NG GKSS+ +AI YG T R Sbjct: 1 MKILNIHFKNINSLEGESRIDFEQSPFSDTGVFAITGPNGSGKSSILDAITLGLYGETFR 60 Query: 81 --RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 R G + + + + + + + KY+ Sbjct: 61 FDRPAGHVMTQHTAECFSEIEFTLNKVKYR 90 >gi|260777521|ref|ZP_05886415.1| exonuclease SbcC [Vibrio coralliilyticus ATCC BAA-450] gi|260607187|gb|EEX33461.1| exonuclease SbcC [Vibrio coralliilyticus ATCC BAA-450] Length = 1013 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F + I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPLSLTMQAFGPFANTENIDFTLLGSNPLFLINGPTGSGKTSILDAICFALYGQTTGNE 60 Query: 83 HGDSIKKR 90 + + Sbjct: 61 REGTQMRC 68 >gi|197303925|ref|ZP_03168957.1| hypothetical protein RUMLAC_02662 [Ruminococcus lactaris ATCC 29176] gi|197296893|gb|EDY31461.1| hypothetical protein RUMLAC_02662 [Ruminococcus lactaris ATCC 29176] Length = 517 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ I+I +FRG+ + KIE D LT+ G+N GKS++ EA+ Sbjct: 1 MKIDSIKIKNFRGYKDETKIELND-LTVFVGKNDIGKSTILEAL 43 >gi|126331355|ref|XP_001372430.1| PREDICTED: similar to chromosome-associated polypeptide-C [Monodelphis domestica] Length = 1415 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 R +I ++++ +F+ + ++ F H + + G NG GKS++ +++ ++F + Sbjct: 208 RLMISHIVNL---NFKSYAGRTQLGPFHKHFSCIIGPNGSGKSNVIDSMLFVFGCRAHK 263 >gi|146296604|ref|YP_001180375.1| SMC domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410180|gb|ABP67184.1| SMC domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 857 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L ++I +F+ + E +I+F + + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLYLKIENFKSYGENFNEIDFKNIKVACIVGKNGNGKSSIAEAITWALFGEFER 56 >gi|333025716|ref|ZP_08453780.1| putative recombination protein F [Streptomyces sp. Tu6071] gi|332745568|gb|EGJ76009.1| putative recombination protein F [Streptomyces sp. Tu6071] Length = 413 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + E ++ +T G NG GK++L EA+ +L + R Sbjct: 27 MHVTHLSLADFRSY-ERAEVSLEPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVASDAP 85 Query: 87 IKKRSIK 93 + + + Sbjct: 86 LVRAGAE 92 >gi|318079376|ref|ZP_07986708.1| recombination protein F [Streptomyces sp. SA3_actF] Length = 312 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + E ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSY-ERAEVSLEPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|289619547|emb|CBI53830.1| putative SMC2 protein [Sordaria macrospora] Length = 1179 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVTEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|315500822|ref|YP_004079709.1| DNA replication and repair protein recf [Micromonospora sp. L5] gi|315407441|gb|ADU05558.1| DNA replication and repair protein RecF [Micromonospora sp. L5] Length = 376 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ ++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGPNVLVGANGVGKTNLVEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRC 105 + + + AV RC Sbjct: 60 LVRMGAAS------AVIRC 72 >gi|302864512|ref|YP_003833149.1| DNA replication and repair protein RecF [Micromonospora aurantiaca ATCC 27029] gi|302567371|gb|ADL43573.1| DNA replication and repair protein RecF [Micromonospora aurantiaca ATCC 27029] Length = 377 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ ++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGPNVLVGANGVGKTNLVEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRC 105 + + + AV RC Sbjct: 60 LVRMGAAS------AVIRC 72 >gi|302520519|ref|ZP_07272861.1| recombination protein F [Streptomyces sp. SPB78] gi|318058968|ref|ZP_07977691.1| recombination protein F [Streptomyces sp. SA3_actG] gi|302429414|gb|EFL01230.1| recombination protein F [Streptomyces sp. SPB78] Length = 387 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + E ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSY-ERAEVSLEPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|283797182|ref|ZP_06346335.1| RecF protein [Clostridium sp. M62/1] gi|291075140|gb|EFE12504.1| RecF protein [Clostridium sp. M62/1] gi|295090281|emb|CBK76388.1| DNA replication and repair protein RecF [Clostridium cf. saccharolyticum K10] gi|295115476|emb|CBL36323.1| DNA replication and repair protein RecF [butyrate-producing bacterium SM4/1] Length = 368 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ ++R + + + F ++ G N GK+++ EA+ + R Sbjct: 8 MFVESIELKNYRNYGSLSMV-FDPGTNVLYGDNAQGKTNVLEAVYVCATTKSHRGSKDKE 66 Query: 87 IKKRSIK 93 I + + Sbjct: 67 IIRFAED 73 >gi|29829468|ref|NP_824102.1| hypothetical protein SAV_2926 [Streptomyces avermitilis MA-4680] gi|29606576|dbj|BAC70637.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 684 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL + + +FR F Q ++ + ++ G NG GK++L A W YG Sbjct: 1 MKLLRLTLDNFRAFYGRQTLDLAVNDSKPAVLIFGNNGAGKTTLLNAFAWALYG 54 >gi|68535065|ref|YP_249770.1| recombination protein F [Corynebacterium jeikeium K411] gi|260579563|ref|ZP_05847434.1| DNA replication and repair protein recF [Corynebacterium jeikeium ATCC 43734] gi|97180706|sp|Q4JYF5|RECF_CORJK RecName: Full=DNA replication and repair protein recF gi|68262664|emb|CAI36152.1| DNA replication and repair protein RecF [Corynebacterium jeikeium K411] gi|258602334|gb|EEW15640.1| DNA replication and repair protein recF [Corynebacterium jeikeium ATCC 43734] Length = 425 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ +S++R + E ++ + +TI +G NG+GK+++ EA+ +L + + R + Sbjct: 1 MYVSNLRLSNYRSW-EELDLQLSPGITIFSGPNGHGKTNIVEALGYLAHLSSHRVNSDAA 59 Query: 87 IKKRSIK 93 + +R + Sbjct: 60 LVRRGEE 66 >gi|288931956|ref|YP_003436016.1| SMC domain protein [Ferroglobus placidus DSM 10642] gi|288894204|gb|ADC65741.1| SMC domain protein [Ferroglobus placidus DSM 10642] Length = 885 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + + + ++ QKIEF + + + G+NG GK+++ EAI ++ + + D ++ Sbjct: 2 IREVYLENVKSYS-RQKIEFTEGINAIIGRNGAGKTTILEAIGFVLFDHLPYNI-SDFVR 59 Query: 89 KRSIKTPMPMCMAVP 103 + K + + P Sbjct: 60 RGEKKAEIRVKFVSP 74 >gi|212543753|ref|XP_002152031.1| nuclear condensin complex subunit Smc2, putative [Penicillium marneffei ATCC 18224] gi|210066938|gb|EEA21031.1| nuclear condensin complex subunit Smc2, putative [Penicillium marneffei ATCC 18224] Length = 1179 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRIVEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|167523340|ref|XP_001746007.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775808|gb|EDQ89431.1| predicted protein [Monosiga brevicollis MX1] Length = 1872 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + + +E F+ H ++ G+NG GKS+ AI ++ Sbjct: 1145 VTIKGFKSYRDQTFVEPFSPHHNVIVGRNGSGKSNFFFAIRFVL 1188 >gi|124022037|ref|YP_001016344.1| hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT 9303] gi|123962323|gb|ABM77079.1| Hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT 9303] Length = 1184 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I + T+V G NG GKS++ + + + T R D + Sbjct: 2 TIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRADRLPDL 47 >gi|194332856|ref|YP_002014716.1| DNA replication and repair protein RecF [Prosthecochloris aestuarii DSM 271] gi|226737818|sp|B4S937|RECF_PROA2 RecName: Full=DNA replication and repair protein recF gi|194310674|gb|ACF45069.1| DNA replication and repair protein RecF [Prosthecochloris aestuarii DSM 271] Length = 370 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +I+I +FR +E+ ++ + ++ G NG GK+++ EAI + Sbjct: 1 MRLDEIKIQNFRKHSELI-FSPSEGINLIFGPNGSGKTNILEAIHYC 46 >gi|71001526|ref|XP_755444.1| nuclear condensin complex subunit Smc2 [Aspergillus fumigatus Af293] gi|66853082|gb|EAL93406.1| nuclear condensin complex subunit Smc2, putative [Aspergillus fumigatus Af293] gi|159129514|gb|EDP54628.1| nuclear condensin complex subunit Smc2, putative [Aspergillus fumigatus A1163] Length = 1179 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVTEIVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|330719970|gb|EGG98424.1| hypothetical protein imdm_26 [gamma proteobacterium IMCC2047] Length = 595 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 L K L S ++ K + I +FR Q ++ + LT + G N GK+++ +AIE Sbjct: 12 LIKLLVSNRYTRVDMKFDSLRIRNFRTLGNEQFVDLRNGLT-IVGPNSSGKTNILKAIEM 70 Query: 73 LFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 +F GY D++ +T + V Sbjct: 71 IFTGY-------DNV--LEYETKRDLTFGV 91 >gi|73667909|ref|YP_303924.1| chromosome segregation protein [Methanosarcina barkeri str. Fusaro] gi|72395071|gb|AAZ69344.1| DNA repair protein RAD50 [Methanosarcina barkeri str. Fusaro] Length = 1074 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL ++ I + R + + F D +T+++G NG GKSSL EA +G Sbjct: 1 MKLKNLHIENIRSY-KKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGS 50 >gi|320582141|gb|EFW96359.1| putative nuclear condensin complex SMC ATPase [Pichia angusta DL-1] Length = 1272 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + ++ +++F+ + Q + F + + G NG GKS++ +++ ++F Sbjct: 55 IEELVLTNFKSYAGRQTVGPFNASFSAIVGPNGSGKSNVIDSLLFVFG 102 >gi|269124281|ref|YP_003297651.1| DNA replication and repair protein RecF [Thermomonospora curvata DSM 43183] gi|268309239|gb|ACY95613.1| DNA replication and repair protein RecF [Thermomonospora curvata DSM 43183] Length = 379 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +I +++ G NG GK++L EAI ++ + R Sbjct: 1 MHVAHLSLQDFRSYA-TAEIALEPGVSVFVGPNGQGKTNLMEAIGYVAAHSSHRVATDAP 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LIRQG 64 >gi|226193270|ref|ZP_03788880.1| RecF/RecN/SMC N domain protein [Burkholderia pseudomallei Pakistan 9] gi|225934870|gb|EEH30847.1| RecF/RecN/SMC N domain protein [Burkholderia pseudomallei Pakistan 9] Length = 774 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIE 71 +TS R I KL + I +FR ++ I+F+ +L++V G N GKSS+ EAI Sbjct: 81 ITSIDQRGAIMKLRRVVIKNFRKLSD---IDFSISKNLSVVVGPNASGKSSIFEAIR 134 >gi|83646206|ref|YP_434641.1| ATPase [Hahella chejuensis KCTC 2396] gi|83634249|gb|ABC30216.1| predicted ATPase [Hahella chejuensis KCTC 2396] Length = 386 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I I +F + E ++ L I+ G NG GK++L EAIE Sbjct: 1 MLLKSISIKNFLSYGEKEQYISLQPLNIIIGPNGSGKTNLIEAIE 45 >gi|212656546|ref|NP_001129842.1| SMC (structural maintenance of chromosomes) family member (smc-3) [Caenorhabditis elegans] gi|186929457|emb|CAQ48406.1| C. elegans protein Y47D3A.26b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1261 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++ I+ FR + + + F+ +V G+NG GKS+ AI+++ Sbjct: 1 MKIKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVL 49 >gi|50550759|ref|XP_502852.1| YALI0D15246p [Yarrowia lipolytica] gi|49648720|emb|CAG81040.1| YALI0D15246p [Yarrowia lipolytica] Length = 1292 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F TE + I F LT++ GQNG GK+++ E + + G Sbjct: 4 ISKLSIQGIRSFDNTERETITFNKPLTLIVGQNGSGKTTIIECLRYATTG 53 >gi|319779752|ref|YP_004139228.1| DNA replication and repair protein RecF [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165640|gb|ADV09178.1| DNA replication and repair protein RecF [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 381 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +++FR + + I+ A + +G NG GK++L EAI +L G RR Sbjct: 7 ISKLTLTNFRNYAALT-IDLAPGAVVFSGDNGAGKTNLLEAISFLTPGRGLRR 58 >gi|307711205|ref|ZP_07647627.1| DNA replication and repair protein recF [Streptococcus mitis SK321] gi|307617167|gb|EFN96345.1| DNA replication and repair protein recF [Streptococcus mitis SK321] Length = 365 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|198419069|ref|XP_002125440.1| PREDICTED: similar to Smc3 protein, partial [Ciona intestinalis] Length = 1192 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + E +IE F+ I+ G+NG GKS+ AI+++ Sbjct: 1 MHIKRVSIQGFRSYRESTEIEPFSSRHNIIVGRNGSGKSNFFCAIQFVL 49 >gi|296084229|emb|CBI24617.3| unnamed protein product [Vitis vinifera] Length = 125 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + DI + F+ + + F + + G NG KS++ ++I ++ R+ Sbjct: 1 MYIKDICLEGFKSYATRTVVPGFDPYFNAITGLNGSCKSNILDSICFVLGITNLRQVLAS 60 Query: 86 SIKKRSIKT 94 +++K K Sbjct: 61 NLQKLVYKQ 69 >gi|156977416|ref|YP_001448322.1| hypothetical protein VIBHAR_06203 [Vibrio harveyi ATCC BAA-1116] gi|156529010|gb|ABU74095.1| hypothetical protein VIBHAR_06203 [Vibrio harveyi ATCC BAA-1116] Length = 669 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE--WLFYGYTQRRKHG 84 KL + IS+F+ F ++ +IEF + LT + G NG GK+S A+ + +++ Sbjct: 1 MKLSKVRISNFQCFGKLTEIEFEEDLTALIGLNGSGKTSTLHALSRMFGVTESSRKVLVD 60 Query: 85 D 85 D Sbjct: 61 D 61 >gi|116196206|ref|XP_001223915.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88180614|gb|EAQ88082.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 1131 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVTELIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|182890078|gb|AAI65249.1| Smc3 protein [Danio rerio] Length = 1216 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFGSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|331083522|ref|ZP_08332634.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 6_1_63FAA] gi|330404215|gb|EGG83763.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 6_1_63FAA] Length = 361 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ ++R + + +EF I G N GK+++ EA + R Sbjct: 1 MYIESIELKNYRNYNSLA-LEFDKGTNIFYGDNAQGKTNILEAAYLCSTTKSHRGSKDKE 59 Query: 87 IKK 89 + K Sbjct: 60 MIK 62 >gi|255577566|ref|XP_002529661.1| Structural maintenance of chromosome, putative [Ricinus communis] gi|223530887|gb|EEF32748.1| Structural maintenance of chromosome, putative [Ricinus communis] Length = 1246 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + V G NG GK++ AI ++ Sbjct: 1 MYIKQVIIEGFKSYREQIATENFSPKINCVVGANGSGKTNFFHAIRFVL 49 >gi|308175817|ref|YP_003915223.1| DNA replication and repair protein RecF [Arthrobacter arilaitensis Re117] gi|307743280|emb|CBT74252.1| DNA replication and repair protein RecF [Arthrobacter arilaitensis Re117] Length = 387 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++ FR + + A + ++ G NG GK+++ E+I +L + R + Sbjct: 1 MYISQLSLTGFRSYA-QADVHLAPGINVLIGPNGVGKTNIVESIGYLANLSSHRVSND 57 >gi|238061916|ref|ZP_04606625.1| recombination protein F [Micromonospora sp. ATCC 39149] gi|237883727|gb|EEP72555.1| recombination protein F [Micromonospora sp. ATCC 39149] Length = 377 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ I+ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGPNILIGANGTGKTNLVEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRC 105 + + + AV RC Sbjct: 60 LVRLGATS------AVIRC 72 >gi|47550693|ref|NP_999854.1| structural maintenance of chromosomes protein 3 [Danio rerio] gi|27881878|gb|AAH44408.1| Structural maintenance of chromosomes 3 [Danio rerio] Length = 1216 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFGSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|16330164|ref|NP_440892.1| recombination protein F [Synechocystis sp. PCC 6803] gi|6093944|sp|P73532|RECF_SYNY3 RecName: Full=DNA replication and repair protein recF gi|1652652|dbj|BAA17572.1| RecF protein [Synechocystis sp. PCC 6803] Length = 384 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E + +EF+ TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKKLYLRAFRNYLEEE-VEFSAQKTILVGNNAQGKSNLLEAVELLATLKSHRTSRDQE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|302851666|ref|XP_002957356.1| structural maintenance of chromosomes protein 2 [Volvox carteri f. nagariensis] gi|300257315|gb|EFJ41565.1| structural maintenance of chromosomes protein 2 [Volvox carteri f. nagariensis] Length = 199 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + + F + G NG GKS++ ++I ++ + Sbjct: 1 MYISEVCIEGFKSYASRVTLSNFDQCFNAITGLNGSGKSNILDSICFVLGIKNLSQVRAT 60 Query: 86 SIKKRSIKT 94 S+++ K Sbjct: 61 SLQELVYKQ 69 >gi|296500842|ref|YP_003662542.1| recombination protein F [Bacillus thuringiensis BMB171] gi|296321894|gb|ADH04822.1| recombination protein F [Bacillus thuringiensis BMB171] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|295103717|emb|CBL01261.1| recF protein [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL +E+ ++R ++E LT++ G NG GK++L EAI L G + R Sbjct: 1 MHLLSLEVQNYRNICA-ARLEPGRELTVICGNNGQGKTNLLEAIWLLTGGKSFRGGKDAE 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LVRRG 64 >gi|254724150|ref|ZP_05185935.1| recombination protein F [Bacillus anthracis str. A1055] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|228924237|ref|ZP_04087508.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835455|gb|EEM80825.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|228961756|ref|ZP_04123359.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797950|gb|EEM44960.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pakistani str. T13001] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|228942641|ref|ZP_04105173.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975571|ref|ZP_04136123.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982207|ref|ZP_04142496.1| DNA replication and repair protein recF [Bacillus thuringiensis Bt407] gi|228777559|gb|EEM25837.1| DNA replication and repair protein recF [Bacillus thuringiensis Bt407] gi|228784181|gb|EEM32208.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817067|gb|EEM63160.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937801|gb|AEA13697.1| recombination protein F [Bacillus thuringiensis serovar chinensis CT-43] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|229035150|ref|ZP_04189096.1| DNA replication and repair protein recF [Bacillus cereus AH1271] gi|228728216|gb|EEL79246.1| DNA replication and repair protein recF [Bacillus cereus AH1271] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|229099919|ref|ZP_04230842.1| DNA replication and repair protein recF [Bacillus cereus Rock3-29] gi|229118982|ref|ZP_04248327.1| DNA replication and repair protein recF [Bacillus cereus Rock1-3] gi|228664507|gb|EEL20003.1| DNA replication and repair protein recF [Bacillus cereus Rock1-3] gi|228683534|gb|EEL37489.1| DNA replication and repair protein recF [Bacillus cereus Rock3-29] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|229094603|ref|ZP_04225670.1| DNA replication and repair protein recF [Bacillus cereus Rock3-42] gi|229159053|ref|ZP_04287109.1| DNA replication and repair protein recF [Bacillus cereus ATCC 4342] gi|300118806|ref|ZP_07056526.1| recombination protein F [Bacillus cereus SJ1] gi|228624472|gb|EEK81243.1| DNA replication and repair protein recF [Bacillus cereus ATCC 4342] gi|228688850|gb|EEL42681.1| DNA replication and repair protein recF [Bacillus cereus Rock3-42] gi|298723774|gb|EFI64496.1| recombination protein F [Bacillus cereus SJ1] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|229176168|ref|ZP_04303660.1| DNA replication and repair protein recF [Bacillus cereus MM3] gi|228607327|gb|EEK64657.1| DNA replication and repair protein recF [Bacillus cereus MM3] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|196036149|ref|ZP_03103549.1| DNA replication and repair protein RecF [Bacillus cereus W] gi|195991316|gb|EDX55284.1| DNA replication and repair protein RecF [Bacillus cereus W] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|206970379|ref|ZP_03231332.1| DNA replication and repair protein RecF [Bacillus cereus AH1134] gi|206734956|gb|EDZ52125.1| DNA replication and repair protein RecF [Bacillus cereus AH1134] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|113913515|gb|ABI48901.1| RAD50 [Saccharomyces pastorianus] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|52145206|ref|YP_081623.1| recombination protein F [Bacillus cereus E33L] gi|81689896|sp|Q63HG4|RECF_BACCZ RecName: Full=DNA replication and repair protein recF gi|51978675|gb|AAU20225.1| DNA replication and repair protein [Bacillus cereus E33L] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|42779085|ref|NP_976332.1| recombination protein F [Bacillus cereus ATCC 10987] gi|49477032|ref|YP_034364.1| recombination protein F [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118475782|ref|YP_892933.1| recombination protein F [Bacillus thuringiensis str. Al Hakam] gi|196041944|ref|ZP_03109231.1| DNA replication and repair protein RecF [Bacillus cereus NVH0597-99] gi|196045554|ref|ZP_03112785.1| DNA replication and repair protein RecF [Bacillus cereus 03BB108] gi|206975840|ref|ZP_03236751.1| DNA replication and repair protein RecF [Bacillus cereus H3081.97] gi|217957585|ref|YP_002336127.1| recombination protein F [Bacillus cereus AH187] gi|222093778|ref|YP_002527825.1| recombination protein f [Bacillus cereus Q1] gi|225862061|ref|YP_002747439.1| DNA replication and repair protein RecF [Bacillus cereus 03BB102] gi|228918104|ref|ZP_04081632.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930498|ref|ZP_04093498.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931510|ref|ZP_04094420.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228988721|ref|ZP_04148806.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229124995|ref|ZP_04254169.1| DNA replication and repair protein recF [Bacillus cereus 95/8201] gi|229142241|ref|ZP_04270765.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST26] gi|229187721|ref|ZP_04314857.1| DNA replication and repair protein recF [Bacillus cereus BGSC 6E1] gi|229199684|ref|ZP_04326327.1| DNA replication and repair protein recF [Bacillus cereus m1293] gi|301051745|ref|YP_003789956.1| recombination protein F [Bacillus anthracis CI] gi|51316288|sp|Q73FK2|RECF_BACC1 RecName: Full=DNA replication and repair protein recF gi|81697025|sp|Q6HQ00|RECF_BACHK RecName: Full=DNA replication and repair protein recF gi|166220700|sp|A0R883|RECF_BACAH RecName: Full=DNA replication and repair protein recF gi|226737771|sp|B7HPS0|RECF_BACC7 RecName: Full=DNA replication and repair protein recF gi|254790462|sp|C1ES11|RECF_BACC3 RecName: Full=DNA replication and repair protein recF gi|254790463|sp|B9IYH1|RECF_BACCQ RecName: Full=DNA replication and repair protein recF gi|42735000|gb|AAS38940.1| DNA replication and repair protein RecF [Bacillus cereus ATCC 10987] gi|49328588|gb|AAT59234.1| DNA replication and repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415007|gb|ABK83426.1| DNA replication and repair protein RecF [Bacillus thuringiensis str. Al Hakam] gi|196023761|gb|EDX62437.1| DNA replication and repair protein RecF [Bacillus cereus 03BB108] gi|196027199|gb|EDX65819.1| DNA replication and repair protein RecF [Bacillus cereus NVH0597-99] gi|206745934|gb|EDZ57330.1| DNA replication and repair protein RecF [Bacillus cereus H3081.97] gi|217067704|gb|ACJ81954.1| DNA replication and repair protein RecF [Bacillus cereus AH187] gi|221237823|gb|ACM10533.1| DNA replication and repair protein [Bacillus cereus Q1] gi|225790870|gb|ACO31087.1| DNA replication and repair protein RecF [Bacillus cereus 03BB102] gi|228583779|gb|EEK41954.1| DNA replication and repair protein recF [Bacillus cereus m1293] gi|228595789|gb|EEK53473.1| DNA replication and repair protein recF [Bacillus cereus BGSC 6E1] gi|228641259|gb|EEK97566.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST26] gi|228658496|gb|EEL14162.1| DNA replication and repair protein recF [Bacillus cereus 95/8201] gi|228771033|gb|EEM19514.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228828153|gb|EEM73877.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829217|gb|EEM74854.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841584|gb|EEM86700.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300373914|gb|ADK02818.1| recombination protein F [Bacillus cereus biovar anthracis str. CI] gi|324323998|gb|ADY19258.1| recombination protein F [Bacillus thuringiensis serovar finitimus YBT-020] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|30018282|ref|NP_829913.1| recombination protein F [Bacillus cereus ATCC 14579] gi|218232841|ref|YP_002364859.1| recombination protein F [Bacillus cereus B4264] gi|228955742|ref|ZP_04117737.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229051161|ref|ZP_04194705.1| DNA replication and repair protein recF [Bacillus cereus AH676] gi|229072957|ref|ZP_04206153.1| DNA replication and repair protein recF [Bacillus cereus F65185] gi|229112905|ref|ZP_04242436.1| DNA replication and repair protein recF [Bacillus cereus Rock1-15] gi|229130738|ref|ZP_04259691.1| DNA replication and repair protein recF [Bacillus cereus BDRD-Cer4] gi|229148042|ref|ZP_04276381.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST24] gi|229153651|ref|ZP_04281827.1| DNA replication and repair protein recF [Bacillus cereus m1550] gi|229181738|ref|ZP_04309061.1| DNA replication and repair protein recF [Bacillus cereus 172560W] gi|229193743|ref|ZP_04320684.1| DNA replication and repair protein recF [Bacillus cereus ATCC 10876] gi|51316395|sp|Q81JD2|RECF_BACCR RecName: Full=DNA replication and repair protein recF gi|226737770|sp|B7HIH7|RECF_BACC4 RecName: Full=DNA replication and repair protein recF gi|29893822|gb|AAP07114.1| DNA replication and repair protein recF [Bacillus cereus ATCC 14579] gi|218160798|gb|ACK60790.1| DNA replication and repair protein RecF [Bacillus cereus B4264] gi|228589768|gb|EEK47646.1| DNA replication and repair protein recF [Bacillus cereus ATCC 10876] gi|228601771|gb|EEK59269.1| DNA replication and repair protein recF [Bacillus cereus 172560W] gi|228629837|gb|EEK86490.1| DNA replication and repair protein recF [Bacillus cereus m1550] gi|228635467|gb|EEK91958.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST24] gi|228652755|gb|EEL08640.1| DNA replication and repair protein recF [Bacillus cereus BDRD-Cer4] gi|228670584|gb|EEL25897.1| DNA replication and repair protein recF [Bacillus cereus Rock1-15] gi|228710203|gb|EEL62181.1| DNA replication and repair protein recF [Bacillus cereus F65185] gi|228722224|gb|EEL73625.1| DNA replication and repair protein recF [Bacillus cereus AH676] gi|228803970|gb|EEM50594.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|75761790|ref|ZP_00741725.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895145|ref|YP_002443556.1| DNA replication and repair protein RecF [Bacillus cereus G9842] gi|228905436|ref|ZP_04069391.1| DNA replication and repair protein recF [Bacillus thuringiensis IBL 4222] gi|228968645|ref|ZP_04129628.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar sotto str. T04001] gi|226737769|sp|B7IS23|RECF_BACC2 RecName: Full=DNA replication and repair protein recF gi|74490723|gb|EAO54004.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218546019|gb|ACK98413.1| DNA replication and repair protein RecF [Bacillus cereus G9842] gi|228791074|gb|EEM38692.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar sotto str. T04001] gi|228854256|gb|EEM98959.1| DNA replication and repair protein recF [Bacillus thuringiensis IBL 4222] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|332159251|ref|YP_004424530.1| chromosome segregation protein [Pyrococcus sp. NA2] gi|331034714|gb|AEC52526.1| chromosome segregation protein [Pyrococcus sp. NA2] Length = 879 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + + +FR +I +IEF + ++ GQNG GKSSL +AI Y + R G Sbjct: 1 MRIERVRVENFRSH-KISEIEFKPGINLIIGQNGAGKSSLLDAILVGLYWSKRLRIRG 57 >gi|281417662|ref|ZP_06248682.1| SMC domain protein [Clostridium thermocellum JW20] gi|281409064|gb|EFB39322.1| SMC domain protein [Clostridium thermocellum JW20] Length = 483 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + I +F+ + ++ F+D L ++ G + GKS++ AI+W+ Y G Sbjct: 1 MITIKRVRIENFQSHKD-TELSFSDGLNVIVGPSDQGKSAIIRAIKWVLYNEP----RGT 55 Query: 86 SIKKRSIKTPM 96 ++ + Sbjct: 56 DFIRQGTNSAR 66 >gi|315604865|ref|ZP_07879923.1| exonuclease SbcC subfamily [Actinomyces sp. oral taxon 180 str. F0310] gi|315313404|gb|EFU61463.1| exonuclease SbcC subfamily [Actinomyces sp. oral taxon 180 str. F0310] Length = 1031 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ + I+ F +++F+ L +++G G GKS+L +AI + YG R K Sbjct: 1 MKIRWLRITGIGPFAGTHRVDFSAFEDSGLFLLDGPTGSGKSTLIDAITFALYGDVARTK 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DASKDRLRS 69 >gi|227494995|ref|ZP_03925311.1| exonuclease [Actinomyces coleocanis DSM 15436] gi|226831447|gb|EEH63830.1| exonuclease [Actinomyces coleocanis DSM 15436] Length = 983 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L+++ + F E +I FAD L ++ G G GKS++ +A+ + YG + Sbjct: 1 MRLIELNFAAIGPFPEEHRIRFADFESAGLFLLRGATGSGKSTIIDAVLFALYGEAAIKI 60 Query: 83 HGDSIKKRSIKTPMPMC 99 S++ RS M Sbjct: 61 TSSSLRLRSNFARKEMN 77 >gi|71023505|ref|XP_761982.1| hypothetical protein UM05835.1 [Ustilago maydis 521] gi|46101547|gb|EAK86780.1| hypothetical protein UM05835.1 [Ustilago maydis 521] Length = 1223 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + + F + G NG GKS++ ++I ++ + Sbjct: 1 MRIEELIIDGFKSYPVRTHVSGFDASFNAITGLNGSGKSNILDSICFVLGITNLTAVRAN 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|302898855|ref|XP_003047930.1| condensin complex component SMC4 [Nectria haematococca mpVI 77-13-4] gi|256728862|gb|EEU42217.1| condensin complex component SMC4 [Nectria haematococca mpVI 77-13-4] Length = 1449 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 203 LTHLILNNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 259 >gi|257065524|ref|YP_003151780.1| DNA replication and repair protein RecF [Anaerococcus prevotii DSM 20548] gi|256797404|gb|ACV28059.1| DNA replication and repair protein RecF [Anaerococcus prevotii DSM 20548] Length = 359 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ D+++++FR + +EF I G N GK++L E++ +L + ++ Sbjct: 1 MRIKDLKLNNFRNYFYEN-VEFNKDSNIFIGDNAQGKTNLLESVYYLANASSFKKIRDKD 59 Query: 87 IKKRSIKT 94 I + Sbjct: 60 IVRFGQSQ 67 >gi|147797629|emb|CAN76338.1| hypothetical protein VITISV_035723 [Vitis vinifera] Length = 350 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I + I + F+ + + F + + G NG KS++ ++I ++ R+ Sbjct: 1 IMYIKXICLEGFKSYATRTVVPGFDPYFNAITGLNGSCKSNILDSICFVLGITNLRQVLA 60 Query: 85 DSIKKRSIKT 94 +++K K Sbjct: 61 SNLQKLVYKQ 70 >gi|78173107|gb|ABB29470.1| RecF [Streptomyces argillaceus] Length = 373 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|172057242|ref|YP_001813702.1| SMC domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171989763|gb|ACB60685.1| SMC domain protein [Exiguobacterium sibiricum 255-15] Length = 1002 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 6/88 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + F F + Q I+F + +++G G GK+++ +A+ + YG T + Sbjct: 1 MRPERLTLRAFGPFADEQTIDFRALGGRTMFVISGNTGAGKTTIFDALTFALYGETSGGE 60 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 + P ++QLK Sbjct: 61 R--EMSDLRSHFAKPEQKTEVELEFQLK 86 >gi|303310257|ref|XP_003065141.1| SMC proteins Flexible Hinge Domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240104801|gb|EER22996.1| SMC proteins Flexible Hinge Domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320033964|gb|EFW15910.1| condensin subunit Cut14 [Coccidioides posadasii str. Silveira] Length = 1179 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRIVEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|238926787|ref|ZP_04658547.1| exonuclease Sbcc [Selenomonas flueggei ATCC 43531] gi|238885319|gb|EEQ48957.1| exonuclease Sbcc [Selenomonas flueggei ATCC 43531] Length = 1026 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + I F + + Q ++F +++G G GK+++ +AI + YG + Sbjct: 1 MRPLKLRIQAFGSYVDEQILDFETALADAPFLLIHGVTGSGKTTILDAIVFALYGESSGD 60 Query: 82 KHGDSIKKRSIKTP 95 ++ + S +P Sbjct: 61 IREGAMLRSSTASP 74 >gi|71018099|ref|XP_759280.1| hypothetical protein UM03133.1 [Ustilago maydis 521] gi|46099130|gb|EAK84363.1| hypothetical protein UM03133.1 [Ustilago maydis 521] Length = 1629 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 + + ++ F+ + Q+I F + V G NG GKS++ +++ ++F + + G Sbjct: 284 IHKMVLNDFKSYAGRQEIGPFHKSFSSVVGPNGSGKSNVIDSLLFVFGWRATKMRQGKLS 343 Query: 85 DSIKKRSIKTPMPMC 99 + I + K +P C Sbjct: 344 ELIHNSAGKENLPQC 358 >gi|322700245|gb|EFY92001.1| nuclear condensin complex subunit Smc4 [Metarhizium acridum CQMa 102] Length = 1488 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 213 LTHLILNNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 269 >gi|322708199|gb|EFY99776.1| condensin subunit Cut3 [Metarhizium anisopliae ARSEF 23] Length = 1495 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 218 LTHLILNNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 274 >gi|182685163|ref|YP_001836910.1| recombination protein F [Streptococcus pneumoniae CGSP14] gi|226737843|sp|B2INP4|RECF_STRPS RecName: Full=DNA replication and repair protein recF gi|182630497|gb|ACB91445.1| recombination protein F [Streptococcus pneumoniae CGSP14] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTQTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|194473650|ref|NP_001123970.1| structural maintenance of chromosomes protein 1B [Rattus norvegicus] gi|149065716|gb|EDM15589.1| SMC (structural maintenace of chromosomes 1)-like 2 (S. cerevisiae) (predicted) [Rattus norvegicus] Length = 1247 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKT 53 >gi|320158377|ref|YP_004190755.1| exonuclease SbcC [Vibrio vulnificus MO6-24/O] gi|319933689|gb|ADV88552.1| exonuclease SbcC [Vibrio vulnificus MO6-24/O] Length = 1021 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F E + I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPLKLTMQAFGPFAEREVIDFTQLGENPLFLINGPTGSGKTSILDAISFALYGETTGNE 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|300916212|ref|ZP_07132962.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300416448|gb|EFJ99758.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 608 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ F + D Sbjct: 1 MRLRKLKLKNFRGYKNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKND 59 >gi|167754401|ref|ZP_02426528.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] gi|167659026|gb|EDS03156.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] Length = 661 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I + +F+G + +EF LT + G+NG GK+S+ + WL +G K+ + K Sbjct: 6 IKEIRLLNFKGLRNLT-VEFDPALTEIYGRNGIGKTSIFDGFTWLLFG-----KNSEDRK 59 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + IKT +P+ +++ Sbjct: 60 QFGIKTYDEAGNIIPKLPHEV 80 >gi|120609373|ref|YP_969051.1| hypothetical protein Aave_0676 [Acidovorax citrulli AAC00-1] gi|120587837|gb|ABM31277.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 712 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + ++R F K+ F + + G+NG GK++L AI L R + Sbjct: 1 MHISKLSLVNYRNFA-NTKLLFQKGINTIIGENGSGKTNLFRAIRLLLDDNMIRSAY 56 >gi|27366539|ref|NP_762066.1| exonuclease SbcC [Vibrio vulnificus CMCP6] gi|27358105|gb|AAO07056.1| Exonuclease SbcC [Vibrio vulnificus CMCP6] Length = 1021 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F E + I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPLKLTMQAFGPFAEREVIDFTQLGENPLFLINGPTGSGKTSILDAISFALYGETTGNE 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|328710132|ref|XP_001946952.2| PREDICTED: structural maintenance of chromosomes protein 2-like [Acyrthosiphon pisum] Length = 1660 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I F+ + + ++ F + G NG GKS++ +AI + Sbjct: 1 MHIKSLVIDGFKSYGKRVELNNFDPEFNAITGLNGTGKSNILDAICFTLGISAMNTIRAS 60 Query: 86 SIKKRSIKT 94 +++ K+ Sbjct: 61 TMQDVIYKS 69 >gi|291520351|emb|CBK75572.1| hypothetical protein CIY_30610 [Butyrivibrio fibrisolvens 16/4] Length = 94 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +FR + E I F +H TI+ G N GK+++ EA + + I Sbjct: 3 IKSIELENFRNY-ESLNINFDEHTTILFGDNAQGKTNILEAAYLSGTTKSHKGSRDKEII 61 Query: 89 K 89 K Sbjct: 62 K 62 >gi|254586671|ref|XP_002498903.1| ZYRO0G21296p [Zygosaccharomyces rouxii] gi|238941797|emb|CAR29970.1| ZYRO0G21296p [Zygosaccharomyces rouxii] Length = 1227 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + I+ F+ H IV G NG GKS+ AI ++ Sbjct: 1 MYIRRVVIKGFKTYRNETIIDNFSPHHNIVIGSNGSGKSNFFAAIRFVL 49 >gi|45184642|ref|NP_982360.1| AAL182Wp [Ashbya gossypii ATCC 10895] gi|44979988|gb|AAS50184.1| AAL182Wp [Ashbya gossypii ATCC 10895] Length = 1231 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + +I+ F+ H +V G NG GKS+ AI ++ Sbjct: 1 MYIKKVIIRGFKTYKNKTEIDNFSPHHNVVVGFNGSGKSNFFAAIRFVL 49 >gi|328470779|gb|EGF41690.1| putative exonuclease SbcC [Vibrio parahaemolyticus 10329] Length = 1018 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTETIDFEKLGSNALFLINGPTGSGKTSILDAICFALYGETTSNE 60 Query: 83 HGDSIKKRSIKTPM 96 + + +P Sbjct: 61 RQGIQMRCDLASPQ 74 >gi|320166531|gb|EFW43430.1| XCAP-C [Capsaspora owczarzaki ATCC 30864] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + +Q+I F + V G NG GKS++ +A+ ++F + R ++ Sbjct: 25 ITKMVLENFKSYAGVQEIGPFHKSFSSVVGPNGSGKSNVIDAMLFVF-AFRANRLRQKNV 83 >gi|260903566|ref|ZP_05911961.1| RecF/RecN/SMC N-terminal domain protein [Vibrio parahaemolyticus AQ4037] gi|308109514|gb|EFO47054.1| RecF/RecN/SMC N-terminal domain protein [Vibrio parahaemolyticus AQ4037] Length = 1018 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTETIDFEKLGSNALFLINGPTGSGKTSILDAICFALYGETTSNE 60 Query: 83 HGDSIKKRSIKTPM 96 + + +P Sbjct: 61 RQGIQMRCDLASPQ 74 >gi|153837194|ref|ZP_01989861.1| ATPase involved in DNA repair [Vibrio parahaemolyticus AQ3810] gi|149749457|gb|EDM60211.1| ATPase involved in DNA repair [Vibrio parahaemolyticus AQ3810] Length = 1018 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTETIDFEKLGSNALFLINGPTGSGKTSILDAICFALYGETTSNE 60 Query: 83 HGDSIKKRSIKTPM 96 + + +P Sbjct: 61 RQGIQMRCDLASPQ 74 >gi|74180294|dbj|BAE24449.1| unnamed protein product [Mus musculus] Length = 284 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|28900877|ref|NP_800532.1| putative exonuclease SbcC [Vibrio parahaemolyticus RIMD 2210633] gi|260366090|ref|ZP_05778550.1| RecF/RecN/SMC N-terminal domain protein [Vibrio parahaemolyticus K5030] gi|260879242|ref|ZP_05891597.1| DNA repair exonuclease [Vibrio parahaemolyticus AN-5034] gi|260896777|ref|ZP_05905273.1| DNA repair exonuclease [Vibrio parahaemolyticus Peru-466] gi|28809323|dbj|BAC62365.1| putative exonuclease SbcC [Vibrio parahaemolyticus RIMD 2210633] gi|308087382|gb|EFO37077.1| DNA repair exonuclease [Vibrio parahaemolyticus Peru-466] gi|308094029|gb|EFO43724.1| DNA repair exonuclease [Vibrio parahaemolyticus AN-5034] gi|308114875|gb|EFO52415.1| RecF/RecN/SMC N-terminal domain protein [Vibrio parahaemolyticus K5030] Length = 1018 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTETIDFEKLGSNALFLINGPTGSGKTSILDAICFALYGETTSNE 60 Query: 83 HGDSIKKRSIKTPM 96 + + +P Sbjct: 61 RQGIQMRCDLASPQ 74 >gi|301620363|ref|XP_002939544.1| PREDICTED: structural maintenance of chromosomes protein 3 [Xenopus (Silurana) tropicalis] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|30260199|ref|NP_842576.1| recombination protein F [Bacillus anthracis str. Ames] gi|47525258|ref|YP_016607.1| recombination protein F [Bacillus anthracis str. 'Ames Ancestor'] gi|49183043|ref|YP_026295.1| recombination protein F [Bacillus anthracis str. Sterne] gi|65317472|ref|ZP_00390431.1| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Bacillus anthracis str. A2012] gi|165873033|ref|ZP_02217654.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0488] gi|167635057|ref|ZP_02393374.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0442] gi|167641747|ref|ZP_02399990.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0193] gi|170689465|ref|ZP_02880655.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0465] gi|170707533|ref|ZP_02897986.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0389] gi|177655288|ref|ZP_02936842.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0174] gi|190569289|ref|ZP_03022183.1| DNA replication and repair protein RecF [Bacillus anthracis Tsiankovskii-I] gi|218901210|ref|YP_002449044.1| DNA replication and repair protein RecF [Bacillus cereus AH820] gi|227812682|ref|YP_002812691.1| DNA replication and repair protein RecF [Bacillus anthracis str. CDC 684] gi|228949214|ref|ZP_04111482.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229602868|ref|YP_002864661.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0248] gi|254687067|ref|ZP_05150925.1| recombination protein F [Bacillus anthracis str. CNEVA-9066] gi|254742124|ref|ZP_05199811.1| recombination protein F [Bacillus anthracis str. Kruger B] gi|254755966|ref|ZP_05207998.1| recombination protein F [Bacillus anthracis str. Vollum] gi|254761354|ref|ZP_05213376.1| recombination protein F [Bacillus anthracis str. Australia 94] gi|51316217|sp|Q6I535|RECF_BACAN RecName: Full=DNA replication and repair protein recF gi|226737768|sp|B7JJC0|RECF_BACC0 RecName: Full=DNA replication and repair protein recF gi|254790460|sp|C3P8P8|RECF_BACAA RecName: Full=DNA replication and repair protein recF gi|254790461|sp|C3LIC5|RECF_BACAC RecName: Full=DNA replication and repair protein recF gi|30253520|gb|AAP24062.1| DNA replication and repair protein RecF [Bacillus anthracis str. Ames] gi|47500406|gb|AAT29082.1| DNA replication and repair protein RecF [Bacillus anthracis str. 'Ames Ancestor'] gi|49176970|gb|AAT52346.1| DNA replication and repair protein RecF [Bacillus anthracis str. Sterne] gi|164711245|gb|EDR16801.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0488] gi|167510301|gb|EDR85704.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0193] gi|167529531|gb|EDR92281.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0442] gi|170127529|gb|EDS96403.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0389] gi|170666567|gb|EDT17340.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0465] gi|172080215|gb|EDT65307.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0174] gi|190559596|gb|EDV13587.1| DNA replication and repair protein RecF [Bacillus anthracis Tsiankovskii-I] gi|218536673|gb|ACK89071.1| DNA replication and repair protein RecF [Bacillus cereus AH820] gi|227005823|gb|ACP15566.1| DNA replication and repair protein RecF [Bacillus anthracis str. CDC 684] gi|228810497|gb|EEM56850.1| DNA replication and repair protein recF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229267276|gb|ACQ48913.1| DNA replication and repair protein RecF [Bacillus anthracis str. A0248] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|262201830|ref|YP_003273038.1| DNA repair exonuclease, SbcC [Gordonia bronchialis DSM 43247] gi|262085177|gb|ACY21145.1| DNA repair exonuclease, SbcC [Gordonia bronchialis DSM 43247] Length = 989 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY----- 77 +L + + F F ++F AD L +++G+ G GK+++ +A+ + +G Sbjct: 1 MRLHRLRMCAFGPFAGDTTVDFDELSADGLFLLHGRTGAGKTTVLDAVAFALFGRVPGAR 60 Query: 78 -TQRRKHGD 85 T RR H D Sbjct: 61 DTNRRLHSD 69 >gi|302415549|ref|XP_003005606.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261355022|gb|EEY17450.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 1323 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 211 ITHLVLTNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 267 >gi|298490107|ref|YP_003720284.1| exonuclease SbcC ['Nostoc azollae' 0708] gi|298232025|gb|ADI63161.1| exonuclease SbcC ['Nostoc azollae' 0708] Length = 1007 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 31 DIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 5 QLILKNFLSYRDAT-LDFGGLHTACICGSNGAGKSSLLEAITWSIWGQSRATVEDDVI 61 >gi|17978290|ref|NP_536718.1| structural maintenance of chromosomes protein 1B [Mus musculus] gi|29336874|sp|Q920F6|SMC1B_MOUSE RecName: Full=Structural maintenance of chromosomes protein 1B; Short=SMC protein 1B; Short=SMC-1-beta; Short=SMC-1B gi|15824418|gb|AAL09333.1|AF303827_1 structural maintenance of chromosomes 1beta [Mus musculus] gi|120538463|gb|AAI29801.1| Structural maintenance of chromosomes 1B [Mus musculus] gi|148672493|gb|EDL04440.1| structural maintenace of chromosomes 1B [Mus musculus] Length = 1248 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKT 53 >gi|307699932|ref|ZP_07636983.1| putative DNA replication and repair protein RecF [Mobiluncus mulieris FB024-16] gi|307614970|gb|EFN94188.1| putative DNA replication and repair protein RecF [Mobiluncus mulieris FB024-16] Length = 436 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + ++ I + + G NG GK++L EA+ +L T R + + Sbjct: 1 MFVTNLALDWFRSYRQLV-ISLEPGVNVFLGANGQGKTNLVEALNYLAVLSTHRAGNDAA 59 Query: 87 IKKRSIKTPMP 97 + R P Sbjct: 60 LIFRGNPEETP 70 >gi|306817505|ref|ZP_07451249.1| recombination protein F [Mobiluncus mulieris ATCC 35239] gi|304649729|gb|EFM47010.1| recombination protein F [Mobiluncus mulieris ATCC 35239] Length = 436 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + ++ I + + G NG GK++L EA+ +L T R + + Sbjct: 1 MFVTNLALDWFRSYRQLV-ISLEPGVNVFLGANGQGKTNLVEALNYLAVLSTHRAGNDAA 59 Query: 87 IKKRSIKTPMP 97 + R P Sbjct: 60 LIFRGNPEETP 70 >gi|269977744|ref|ZP_06184704.1| DNA replication and repair protein RecF [Mobiluncus mulieris 28-1] gi|269934048|gb|EEZ90622.1| DNA replication and repair protein RecF [Mobiluncus mulieris 28-1] Length = 436 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + ++ I + + G NG GK++L EA+ +L T R + + Sbjct: 1 MFVTNLALDWFRSYRQLV-ISLEPGVNVFLGANGQGKTNLVEALNYLAVLSTHRAGNDAA 59 Query: 87 IKKRSIKTPMP 97 + R P Sbjct: 60 LIFRGNPEETP 70 >gi|194398177|ref|YP_002038823.1| recombination protein F [Streptococcus pneumoniae G54] gi|226737841|sp|B5E455|RECF_STRP4 RecName: Full=DNA replication and repair protein recF gi|194357844|gb|ACF56292.1| DNA replication and repair protein RecF [Streptococcus pneumoniae G54] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|84784049|gb|ABC61989.1| Rad50-like protein [Trichomonas vaginalis] Length = 1216 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Query: 28 KLLDIEISHFRGFTE------IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL+ + I R F Q I F +++ ++ G NG GK+++ E++++ G +++ Sbjct: 3 KLISLTIKGIRLFNPEPKEEYKQTINFDNNIILITGPNGSGKTTIFESLQYALTGLCRKK 62 Query: 82 KHG 84 G Sbjct: 63 SAG 65 >gi|148997971|ref|ZP_01825484.1| recombination protein F [Streptococcus pneumoniae SP11-BS70] gi|168576099|ref|ZP_02722004.1| DNA replication and repair protein RecF [Streptococcus pneumoniae MLV-016] gi|307068837|ref|YP_003877803.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200] gi|147755981|gb|EDK63024.1| recombination protein F [Streptococcus pneumoniae SP11-BS70] gi|183578126|gb|EDT98654.1| DNA replication and repair protein RecF [Streptococcus pneumoniae MLV-016] gi|306410374|gb|ADM85801.1| Recombinational DNA repair ATPase (RecF pathway) [Streptococcus pneumoniae AP200] gi|332198641|gb|EGJ12724.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA41317] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|73998561|ref|XP_851818.1| PREDICTED: similar to Structural maintenance of chromosome 3 (Chondroitin sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) isoform 2 [Canis familiaris] Length = 1228 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|311897310|dbj|BAJ29718.1| putative DNA replication and repair protein RecF [Kitasatospora setae KM-6054] Length = 387 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ ++ + R Sbjct: 1 MHVAHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYVATLGSHRVATDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRLGAE 66 >gi|302389772|ref|YP_003825593.1| SMC domain protein [Thermosediminibacter oceani DSM 16646] gi|302200400|gb|ADL07970.1| SMC domain protein [Thermosediminibacter oceani DSM 16646] Length = 483 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + +I F + LT++ G GKS++ A++W+ Y Sbjct: 3 YIKKIRLENFQSHKD-TEITFDEGLTVILGPTDQGKSAIIRALKWVLY 49 >gi|303254888|ref|ZP_07340973.1| recombination protein F [Streptococcus pneumoniae BS455] gi|303259715|ref|ZP_07345691.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP-BS293] gi|303262182|ref|ZP_07348127.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP14-BS292] gi|303264617|ref|ZP_07350536.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS397] gi|303266074|ref|ZP_07351968.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS457] gi|303268482|ref|ZP_07354276.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS458] gi|301802888|emb|CBW35669.1| DNA replication and repair protein RecF [Streptococcus pneumoniae INV200] gi|302598159|gb|EFL65220.1| recombination protein F [Streptococcus pneumoniae BS455] gi|302636822|gb|EFL67312.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP14-BS292] gi|302639267|gb|EFL69726.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP-BS293] gi|302641983|gb|EFL72336.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS458] gi|302644378|gb|EFL74631.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS457] gi|302645987|gb|EFL76215.1| DNA replication and repair protein RecF [Streptococcus pneumoniae BS397] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTQTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|254735167|ref|ZP_05192877.1| recombination protein F [Bacillus anthracis str. Western North America USA6153] Length = 375 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|186684598|ref|YP_001867794.1| hypothetical protein Npun_F4484 [Nostoc punctiforme PCC 73102] gi|186467050|gb|ACC82851.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 690 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 27 FKLLDIEISHFRGFTEIQ---KIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I++ +FR F I D + TI++G NG GK+SL A W+ Y Sbjct: 1 MKLTSIKLCNFRSFYGTTPEMIIAGGDAQNTTIIHGNNGSGKTSLLNAFTWVLY 54 >gi|257075417|ref|ZP_05569778.1| hypothetical protein Faci_00065 [Ferroplasma acidarmanus fer1] Length = 641 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I I +FR + + I+F ++ I+ G NG GK++ AI W YG Sbjct: 1 MYINNIIIKNFRLY-KNVNIDFNSANNKNIAIIIGDNGKGKTTFLNAIAWCLYG 53 >gi|119490636|ref|ZP_01623041.1| Exonuclease SbcC [Lyngbya sp. PCC 8106] gi|119453801|gb|EAW34958.1| Exonuclease SbcC [Lyngbya sp. PCC 8106] Length = 1029 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F + E ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 4 HKLTLKNFLSYRE-ASLDFSGLHTACICGSNGAGKSSLLEAITWAIWGSSRAATEDDII 61 >gi|42627759|tpe|CAD59554.1| TPA: SMC3 protein [Bos taurus] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|17231480|ref|NP_488028.1| hypothetical protein alr3988 [Nostoc sp. PCC 7120] gi|17133123|dbj|BAB75687.1| alr3988 [Nostoc sp. PCC 7120] Length = 1008 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 5 QLVLKNFLSYRDAT-LDFRGLHTACICGSNGAGKSSLLEAITWALWGESRAAAEDDVINS 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 + + + KY++ Sbjct: 64 GEKEVRVDFTFQNNQQKYRI 83 >gi|15902031|ref|NP_346635.1| recombination protein F [Streptococcus pneumoniae TIGR4] gi|111658642|ref|ZP_01409292.1| hypothetical protein SpneT_02000232 [Streptococcus pneumoniae TIGR4] gi|148984530|ref|ZP_01817818.1| recombination protein F [Streptococcus pneumoniae SP3-BS71] gi|148988871|ref|ZP_01820286.1| recombination protein F [Streptococcus pneumoniae SP6-BS73] gi|149003094|ref|ZP_01828003.1| recombination protein F [Streptococcus pneumoniae SP14-BS69] gi|149007732|ref|ZP_01831341.1| recombination protein F [Streptococcus pneumoniae SP18-BS74] gi|149020146|ref|ZP_01835120.1| recombination protein F [Streptococcus pneumoniae SP23-BS72] gi|168491759|ref|ZP_02715902.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC0288-04] gi|168494012|ref|ZP_02718155.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC3059-06] gi|169832646|ref|YP_001695579.1| recombination protein F [Streptococcus pneumoniae Hungary19A-6] gi|237651040|ref|ZP_04525292.1| recombination protein F [Streptococcus pneumoniae CCRI 1974] gi|237821153|ref|ZP_04596998.1| recombination protein F [Streptococcus pneumoniae CCRI 1974M2] gi|307128490|ref|YP_003880521.1| DNA replication and repair protein RecF [Streptococcus pneumoniae 670-6B] gi|20978636|sp|Q97N44|RECF_STRPN RecName: Full=DNA replication and repair protein recF gi|226737842|sp|B1IAD9|RECF_STRPI RecName: Full=DNA replication and repair protein recF gi|14973738|gb|AAK76275.1| DNA replication and repair protein RecF [Streptococcus pneumoniae TIGR4] gi|147758835|gb|EDK65831.1| recombination protein F [Streptococcus pneumoniae SP14-BS69] gi|147760727|gb|EDK67699.1| recombination protein F [Streptococcus pneumoniae SP18-BS74] gi|147923307|gb|EDK74421.1| recombination protein F [Streptococcus pneumoniae SP3-BS71] gi|147925682|gb|EDK76758.1| recombination protein F [Streptococcus pneumoniae SP6-BS73] gi|147930824|gb|EDK81805.1| recombination protein F [Streptococcus pneumoniae SP23-BS72] gi|168995148|gb|ACA35760.1| DNA replication and repair protein RecF [Streptococcus pneumoniae Hungary19A-6] gi|183573999|gb|EDT94527.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC0288-04] gi|183575893|gb|EDT96421.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC3059-06] gi|301795136|emb|CBW37609.1| DNA replication and repair protein RecF [Streptococcus pneumoniae INV104] gi|301800959|emb|CBW33621.1| DNA replication and repair protein RecF [Streptococcus pneumoniae OXC141] gi|306485552|gb|ADM92421.1| DNA replication and repair protein RecF [Streptococcus pneumoniae 670-6B] gi|332077793|gb|EGI88252.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA41301] gi|332199049|gb|EGJ13130.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA47901] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|307710347|ref|ZP_07646788.1| DNA replication and repair protein recF [Streptococcus mitis SK564] gi|307618939|gb|EFN98074.1| DNA replication and repair protein recF [Streptococcus mitis SK564] Length = 363 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|297826003|ref|XP_002880884.1| hypothetical protein ARALYDRAFT_344464 [Arabidopsis lyrata subsp. lyrata] gi|297326723|gb|EFH57143.1| hypothetical protein ARALYDRAFT_344464 [Arabidopsis lyrata subsp. lyrata] Length = 1138 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +F++ + V G NG GKS+ AI ++ Sbjct: 1 MYIKQVIIEGFKSYKEQVATEDFSNKVNCVVGANGSGKSNFFHAIRFVL 49 >gi|297558989|ref|YP_003677963.1| DNA replication and repair protein RecF [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843437|gb|ADH65457.1| DNA replication and repair protein RecF [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 377 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ FR + E +E +++ G NG GK++L EAI ++ + R Sbjct: 1 MYVSHLQLADFRSYRE-ALVEMGPGVSVFVGANGQGKTNLVEAIGYVATLGSHRVSSDTP 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LVRQG 64 >gi|221232925|ref|YP_002512079.1| DNA replication and repair protein RecF [Streptococcus pneumoniae ATCC 700669] gi|225855720|ref|YP_002737232.1| recombination protein F [Streptococcus pneumoniae JJA] gi|225859998|ref|YP_002741508.1| recombination protein F [Streptococcus pneumoniae 70585] gi|254790490|sp|C1CBK4|RECF_STRP7 RecName: Full=DNA replication and repair protein recF gi|254790491|sp|B8ZQB8|RECF_STRPJ RecName: Full=DNA replication and repair protein recF gi|254790493|sp|C1CHM6|RECF_STRZJ RecName: Full=DNA replication and repair protein recF gi|220675387|emb|CAR69989.1| DNA replication and repair protein RecF [Streptococcus pneumoniae ATCC 700669] gi|225719969|gb|ACO15823.1| DNA replication and repair protein RecF [Streptococcus pneumoniae 70585] gi|225724158|gb|ACO20011.1| DNA replication and repair protein RecF [Streptococcus pneumoniae JJA] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|149012798|ref|ZP_01833743.1| recombination protein F [Streptococcus pneumoniae SP19-BS75] gi|147763229|gb|EDK70168.1| recombination protein F [Streptococcus pneumoniae SP19-BS75] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|113913513|gb|ABI48900.1| RAD50 [Saccharomyces cariocanus] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|145594098|ref|YP_001158395.1| SMC domain-containing protein [Salinispora tropica CNB-440] gi|145303435|gb|ABP54017.1| SMC domain protein [Salinispora tropica CNB-440] Length = 824 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F I+F D + G G GKS++ +AI + YG R Sbjct: 1 MRPMRLDLAGFTVFRAATTIDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPR 55 >gi|81427758|ref|YP_394757.1| putative DNA-repair ATPase [Lactobacillus sakei subsp. sakei 23K] gi|78609399|emb|CAI54445.1| Putative DNA-repair ATPase [Lactobacillus sakei subsp. sakei 23K] Length = 680 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +IFK ++++ +FR F K F +T++ +NG GK++ +A + FYG + Sbjct: 1 MIFK--ELKLINFRQFKGENKFVFPINDRKITLIIARNGVGKTTFLQAFRFCFYGES 55 >gi|322388468|ref|ZP_08062071.1| recombination protein F [Streptococcus infantis ATCC 700779] gi|321140781|gb|EFX36283.1| recombination protein F [Streptococcus infantis ATCC 700779] Length = 363 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ I FR + + ++ F L + G+N GK++L E+I +L + R K + Sbjct: 1 MWLKNLSIKQFRNYRD-VEVNFNPKLNVFVGRNAQGKTNLLESIYFLALTRSHRTKTDKN 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIQFEEEQ 67 >gi|256272374|gb|EEU07357.1| Rad50p [Saccharomyces cerevisiae JAY291] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|207341906|gb|EDZ69838.1| YNL250Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|190409224|gb|EDV12489.1| DNA repair protein RAD50 [Saccharomyces cerevisiae RM11-1a] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|168484319|ref|ZP_02709271.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC1873-00] gi|172042411|gb|EDT50457.1| DNA replication and repair protein RecF [Streptococcus pneumoniae CDC1873-00] gi|332198850|gb|EGJ12932.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA47368] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|160947484|ref|ZP_02094651.1| hypothetical protein PEPMIC_01418 [Parvimonas micra ATCC 33270] gi|158446618|gb|EDP23613.1| hypothetical protein PEPMIC_01418 [Parvimonas micra ATCC 33270] Length = 511 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGD 85 K+ ++I++FRG+ + I+F D LT++ G+N GKS++ EA++ + G + + Sbjct: 1 MKITSMKINNFRGYNKEINIKFDD-LTVIVGKNDVGKSTILEALDIFFNDGKGTIKLDKN 59 Query: 86 SIKKRSIK 93 + K Sbjct: 60 DVNNCEAK 67 >gi|119569943|gb|EAW49558.1| chondroitin sulfate proteoglycan 6 (bamacan), isoform CRA_b [Homo sapiens] Length = 1218 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|6324079|ref|NP_014149.1| Rad50p [Saccharomyces cerevisiae S288c] gi|131782|sp|P12753|RAD50_YEAST RecName: Full=DNA repair protein RAD50; AltName: Full=153 kDa protein gi|4273|emb|CAA32919.1| unnamed protein product [Saccharomyces cerevisiae] gi|1255968|emb|CAA65494.1| RAD50 [Saccharomyces cerevisiae] gi|1302293|emb|CAA96157.1| RAD50 [Saccharomyces cerevisiae] gi|259149118|emb|CAY82360.1| Rad50p [Saccharomyces cerevisiae EC1118] gi|285814415|tpg|DAA10309.1| TPA: Rad50p [Saccharomyces cerevisiae S288c] gi|323352853|gb|EGA85155.1| Rad50p [Saccharomyces cerevisiae VL3] Length = 1312 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|15904073|ref|NP_359623.1| recombination protein F [Streptococcus pneumoniae R6] gi|116516540|ref|YP_817437.1| recombination protein F [Streptococcus pneumoniae D39] gi|225857795|ref|YP_002739306.1| recombination protein F [Streptococcus pneumoniae P1031] gi|225862043|ref|YP_002743552.1| recombination protein F [Streptococcus pneumoniae Taiwan19F-14] gi|298229429|ref|ZP_06963110.1| recombination protein F [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255953|ref|ZP_06979539.1| recombination protein F [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501743|ref|YP_003723683.1| recombination protein F [Streptococcus pneumoniae TCH8431/19A] gi|51316461|sp|Q8DMX3|RECF_STRR6 RecName: Full=DNA replication and repair protein recF gi|122277717|sp|Q04HV1|RECF_STRP2 RecName: Full=DNA replication and repair protein recF gi|254790494|sp|C1CNK0|RECF_STRZP RecName: Full=DNA replication and repair protein recF gi|254790495|sp|C1CUE4|RECF_STRZT RecName: Full=DNA replication and repair protein recF gi|15459739|gb|AAL00834.1| Recombination protein RecF [Streptococcus pneumoniae R6] gi|116077116|gb|ABJ54836.1| recF protein [Streptococcus pneumoniae D39] gi|225725404|gb|ACO21256.1| DNA replication and repair protein RecF [Streptococcus pneumoniae P1031] gi|225727340|gb|ACO23191.1| DNA replication and repair protein RecF [Streptococcus pneumoniae Taiwan19F-14] gi|298237338|gb|ADI68469.1| recombination protein F [Streptococcus pneumoniae TCH8431/19A] gi|327388971|gb|EGE87319.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA04375] Length = 365 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|297301841|ref|XP_002805863.1| PREDICTED: structural maintenance of chromosomes protein 3-like [Macaca mulatta] Length = 1204 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|254584660|ref|XP_002497898.1| ZYRO0F16038p [Zygosaccharomyces rouxii] gi|186703715|emb|CAQ43406.1| DNA repair protein RAD50 [Zygosaccharomyces rouxii] gi|238940791|emb|CAR28965.1| ZYRO0F16038p [Zygosaccharomyces rouxii] Length = 1304 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + I+F LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIQFGKPLTLIVGSNGSGKTTIIECLKYATTG 53 >gi|126273109|ref|XP_001368555.1| PREDICTED: similar to chromosome-associated polypeptide [Monodelphis domestica] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|126647910|ref|XP_001388064.1| SMC2 protein [Cryptosporidium parvum Iowa II] gi|126117152|gb|EAZ51252.1| SMC2 protein [Cryptosporidium parvum Iowa II] Length = 1236 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + I +F + G NG GKS++ ++I ++ + + Sbjct: 1 MYIEEIILDGFKSYQKRTVIGKFNPKFNAITGLNGSGKSNILDSICFVLGITNLSQIRIN 60 Query: 86 SIKKRSIKT 94 +++ K+ Sbjct: 61 KLEELVYKS 69 >gi|109094525|ref|XP_001109647.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 1 [Macaca mulatta] Length = 1234 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTI 54 >gi|66808015|ref|XP_637730.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|74996780|sp|Q54LV0|SMC4_DICDI RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4 gi|60466163|gb|EAL64226.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1415 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + Q++ F + V G NG GKS++ +A+ ++F GY ++ + I Sbjct: 160 ITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVF-GYRAKQIRLNKI 218 Query: 88 KKRSIKTPMPMCMAVPR 104 + + + R Sbjct: 219 SELIHNSENHKNLTNGR 235 >gi|301755544|ref|XP_002913607.1| PREDICTED: structural maintenance of chromosomes protein 3-like [Ailuropoda melanoleuca] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|221195489|ref|ZP_03568544.1| RecF/RecN/SMC N terminal domain protein [Atopobium rimae ATCC 49626] gi|221184676|gb|EEE17068.1| RecF/RecN/SMC N terminal domain protein [Atopobium rimae ATCC 49626] Length = 472 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +E+ + + ++ D LT++ G+N GK+S+ +AI W G + D Sbjct: 3 VKISSLELENVKRIRAVELEPTKDGLTVIGGKNAQGKTSVLDAIAWALGGD---KLKPDD 59 Query: 87 IKKRSIKTPMPMCM 100 ++ TP + + Sbjct: 60 PNRKGGATPAKLHI 73 >gi|195504948|ref|XP_002099298.1| GE23444 [Drosophila yakuba] gi|194185399|gb|EDW99010.1| GE23444 [Drosophila yakuba] Length = 1238 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|195331502|ref|XP_002032440.1| GM26555 [Drosophila sechellia] gi|194121383|gb|EDW43426.1| GM26555 [Drosophila sechellia] Length = 1194 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|164691107|dbj|BAF98736.1| unnamed protein product [Homo sapiens] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|15603024|ref|NP_246096.1| recombination protein F [Pasteurella multocida subsp. multocida str. Pm70] gi|13959473|sp|Q9CLQ6|RECF_PASMU RecName: Full=DNA replication and repair protein recF gi|12721507|gb|AAK03243.1| RecF [Pasteurella multocida subsp. multocida str. Pm70] Length = 358 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +FR T +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLIENFRNLTA-VDLEFDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S + P Sbjct: 60 II--SYEQP 66 >gi|4885399|ref|NP_005436.1| structural maintenance of chromosomes protein 3 [Homo sapiens] gi|158517902|ref|NP_113771.2| structural maintenance of chromosomes protein 3 [Rattus norvegicus] gi|197101619|ref|NP_001126947.1| structural maintenance of chromosomes protein 3 [Pongo abelii] gi|149689674|ref|XP_001496837.1| PREDICTED: similar to Structural maintenance of chromosomes protein 3 (Chondroitin sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) [Equus caballus] gi|194042017|ref|XP_001926614.1| PREDICTED: structural maintenance of chromosomes protein 3 [Sus scrofa] gi|291404811|ref|XP_002718785.1| PREDICTED: structural maintenance of chromosomes 3 [Oryctolagus cuniculus] gi|296221205|ref|XP_002756637.1| PREDICTED: structural maintenance of chromosomes protein 3 [Callithrix jacchus] gi|332835297|ref|XP_508031.3| PREDICTED: structural maintenance of chromosomes protein 3 [Pan troglodytes] gi|29337005|sp|Q9UQE7|SMC3_HUMAN RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3; AltName: Full=Basement membrane-associated chondroitin proteoglycan; Short=Bamacan; AltName: Full=Chondroitin sulfate proteoglycan 6; AltName: Full=Chromosome-associated polypeptide; Short=hCAP gi|71153768|sp|Q5R4K5|SMC3_PONAB RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3; AltName: Full=Chondroitin sulfate proteoglycan 6 gi|3089368|gb|AAC14893.1| chromosome-associated polypeptide [Homo sapiens] gi|55733256|emb|CAH93311.1| hypothetical protein [Pongo abelii] gi|55959087|emb|CAI16576.1| structural maintenance of chromosomes 3 [Homo sapiens] gi|119569942|gb|EAW49557.1| chondroitin sulfate proteoglycan 6 (bamacan), isoform CRA_a [Homo sapiens] gi|149040399|gb|EDL94437.1| chondroitin sulfate proteoglycan 6, isoform CRA_b [Rattus norvegicus] gi|157279396|gb|AAI53264.1| SMC3 protein [Bos taurus] gi|158260565|dbj|BAF82460.1| unnamed protein product [Homo sapiens] gi|306921253|dbj|BAJ17706.1| structural maintenance of chromosomes 3 [synthetic construct] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|36031035|ref|NP_031816.2| structural maintenance of chromosomes protein 3 [Mus musculus] gi|29336931|sp|Q9CW03|SMC3_MOUSE RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3; AltName: Full=Basement membrane-associated chondroitin proteoglycan; Short=Bamacan; AltName: Full=Chondroitin sulfate proteoglycan 6; AltName: Full=Chromosome segregation protein SmcD; AltName: Full=Mad member-interacting protein 1 gi|4689090|gb|AAD27754.1|AF047601_1 SMCD [Mus musculus] gi|5326862|gb|AAD42073.1|AF141294_1 bamacan [Mus musculus] gi|95104800|gb|ABF51669.1| Cspg6 [Mus musculus] Length = 1217 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|20090030|ref|NP_616105.1| chromosome segregation protein [Methanosarcina acetivorans C2A] gi|49036451|sp|Q8TRL1|RAD50_METAC RecName: Full=DNA double-strand break repair rad50 ATPase gi|19914999|gb|AAM04585.1| purine NTPase [Methanosarcina acetivorans C2A] Length = 1074 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 KL ++ I + R + F D +T+++G NG GKSSL EA +G + D Sbjct: 1 MKLKNLYIENIRSYR-KLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGS--KILSKDF 57 Query: 86 ---SIKKRSIKTPM 96 + + +T Sbjct: 58 VLADMIFKGAETAK 71 >gi|313156957|gb|EFR56390.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 646 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L +I IS ++ F + F + L+++ G+NG GKS++ +AI L R Sbjct: 1 MYLSEINISGYKLFGSDFRATFNEGLSVIVGENGSGKSAIIDAIRLLLNEDEYGRI 56 >gi|310639249|ref|YP_003944008.1| SMC domain-containing protein [Ketogulonicigenium vulgare Y25] gi|308752825|gb|ADO43969.1| SMC domain-containing protein [Ketogulonicigenium vulgare Y25] Length = 423 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 K+ + ++ RGF + EF H T++ G NG GKSS+ EA+ Sbjct: 1 MKIRRLSVAGLRGF-DQATFEFDPHFTLLVGVNGVGKSSVLEALR 44 >gi|171741732|ref|ZP_02917539.1| hypothetical protein BIFDEN_00823 [Bifidobacterium dentium ATCC 27678] gi|283454962|ref|YP_003359526.1| Recombinational DNA repair ATPase RecF [Bifidobacterium dentium Bd1] gi|171277346|gb|EDT45007.1| hypothetical protein BIFDEN_00823 [Bifidobacterium dentium ATCC 27678] gi|283101596|gb|ADB08702.1| Recombinational DNA repair ATPase RecF [Bifidobacterium dentium Bd1] Length = 396 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + E ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MYISRLALDHYRSW-ERCVLDFEPGVNILQGANGLGKTNIVEAVEVLSTGSSHR 53 >gi|154252132|ref|YP_001412956.1| hypothetical protein Plav_1680 [Parvibaculum lavamentivorans DS-1] gi|154156082|gb|ABS63299.1| hypothetical protein Plav_1680 [Parvibaculum lavamentivorans DS-1] Length = 771 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 25/45 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L ++I +R F I +H+T++ G N +GK++ A+E Sbjct: 1 MRLTKVQIKGYRSFKAKTTILLDNHITVLLGANDHGKTNFLSALE 45 >gi|45383139|ref|NP_989848.1| structural maintenance of chromosomes protein 3 [Gallus gallus] gi|224052801|ref|XP_002197776.1| PREDICTED: structural maintenance of chromosomes 3 [Taeniopygia guttata] gi|26801170|emb|CAD58708.1| cohesin complex subunit [Gallus gallus] Length = 1217 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|38566257|gb|AAH62935.1| Structural maintenace of chromosomes 3 [Mus musculus] Length = 1216 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|15899022|ref|NP_343627.1| purine NTPase [Sulfolobus solfataricus P2] gi|284175108|ref|ZP_06389077.1| purine NTPase [Sulfolobus solfataricus 98/2] gi|18202628|sp|Q97WH0|RAD50_SULSO RecName: Full=DNA double-strand break repair rad50 ATPase gi|13815551|gb|AAK42417.1| Purine NTPase [Sulfolobus solfataricus P2] gi|261600766|gb|ACX90369.1| Rad50 zinc hook domain protein [Sulfolobus solfataricus 98/2] Length = 864 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I+F + ++ GQNG GKSS+ + I + + T R + D+ Sbjct: 1 MRIDKITLTNFLSH-EHSEIQFMGEINVIVGQNGAGKSSIIDGIVFSLF-RTHSRGNNDN 58 Query: 87 IKKRSI 92 + ++ Sbjct: 59 LIRKGS 64 >gi|119714276|ref|YP_921241.1| recombination protein F [Nocardioides sp. JS614] gi|166220721|sp|A1SCL9|RECF_NOCSJ RecName: Full=DNA replication and repair protein recF gi|119534937|gb|ABL79554.1| DNA replication and repair protein RecF [Nocardioides sp. JS614] Length = 420 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + ++E + +T G+NG GK++L EAI++L + R Sbjct: 1 MYVAHLSLHDFRSYA-TAEVELSPGVTAFIGRNGQGKTNLVEAIDYLSRLSSHRVASDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRAGADQ 67 >gi|67594865|ref|XP_665922.1| SMC2 protein [Cryptosporidium hominis TU502] gi|54656795|gb|EAL35692.1| SMC2 protein [Cryptosporidium hominis] Length = 1236 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + I F + G NG GKS++ ++I ++ + + Sbjct: 1 MYIEEIILDGFKSYQKRTVIGRFNPKFNAITGLNGSGKSNILDSICFVLGITNLSQIRIN 60 Query: 86 SIKKRSIKT 94 +++ K+ Sbjct: 61 KLEELVYKS 69 >gi|307705894|ref|ZP_07642732.1| DNA replication and repair protein recF [Streptococcus mitis SK597] gi|307620555|gb|EFN99653.1| DNA replication and repair protein recF [Streptococcus mitis SK597] Length = 365 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + Sbjct: 60 LIHFDEDQ 67 >gi|291543632|emb|CBL16741.1| hypothetical protein RUM_05180 [Ruminococcus sp. 18P13] Length = 1083 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + + L ++ G G GK++L +AI + YG + Sbjct: 1 MRPLTLTMSAFGPYAGKTTLPLEQLGERGLYLITGDTGAGKTTLFDAIAFALYGEASGQN 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 RSSSMLRSKYADP 73 >gi|293400052|ref|ZP_06644198.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306452|gb|EFE47695.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 366 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I + FR + ++Q + F+D + ++ G+N GK++L EA+ +L + R Sbjct: 1 MRVSEIRLHDFRNYEDLQAV-FSDGIHVLAGKNAQGKTNLLEALLYLSTTRSHRTNTDKD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIREKSE 66 >gi|288919086|ref|ZP_06413426.1| exonuclease SbcC [Frankia sp. EUN1f] gi|288349526|gb|EFC83763.1| exonuclease SbcC [Frankia sp. EUN1f] Length = 1188 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +EI+ F F + ++F + + G G GKS++ +A+ + YG R Sbjct: 6 LEIAGFGSFRDPATVDFTEVDYFALVGPTGSGKSTVIDAMTFALYGSVPR 55 >gi|138893683|ref|YP_001124136.1| recombination protein F [Geobacillus thermodenitrificans NG80-2] gi|196249897|ref|ZP_03148593.1| DNA replication and repair protein RecF [Geobacillus sp. G11MC16] gi|166220711|sp|A4IJ87|RECF_GEOTN RecName: Full=DNA replication and repair protein recF gi|134265196|gb|ABO65391.1| RecF [Geobacillus thermodenitrificans NG80-2] gi|196210773|gb|EDY05536.1| DNA replication and repair protein RecF [Geobacillus sp. G11MC16] Length = 372 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++++R + E + + F + I+ G+N GK+++ EAI L + R + Sbjct: 1 MFLTNLTLTNYRNY-EHETLSFDQGVNIILGENAQGKTNMMEAIYVLAMAKSHRTTNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|72160410|ref|YP_288067.1| recombination protein F [Thermobifida fusca YX] gi|97181072|sp|Q47U20|RECF_THEFY RecName: Full=DNA replication and repair protein recF gi|71914142|gb|AAZ54044.1| DNA replication and repair protein RecF [Thermobifida fusca YX] Length = 377 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +R + E +E ++ G NG GK++L EAI ++ + R H Sbjct: 1 MHVSHLQLADYRSY-EAAYLELEPGVSTFIGPNGQGKTNLVEAIGYVATHSSHRVAHDAP 59 Query: 87 IKKRSIK 93 + +R + Sbjct: 60 LVRRGAQ 66 >gi|7239255|gb|AAF43149.1|AF225909_1 cohesin subunit [Drosophila melanogaster] gi|7159657|emb|CAB76376.1| SMC1 protein [Drosophila melanogaster] Length = 1238 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|47095887|ref|ZP_00233491.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|254900455|ref|ZP_05260379.1| RecF/RecN/SMC N domain protein [Listeria monocytogenes J0161] gi|254913307|ref|ZP_05263319.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937688|ref|ZP_05269385.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015764|gb|EAL06693.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|258610288|gb|EEW22896.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293591308|gb|EFF99642.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 690 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++I+++R F +I+ + + ++ G N GKS+L +A+ + +++ D Sbjct: 1 MYISKVKINNYRSFI-NTEIDLNEGINVLIGHNNAGKSNLLKALAIVLGSTSKKMSIHDF 59 Query: 87 IKKRSIK 93 K ++ Sbjct: 60 NKDIKLE 66 >gi|331092115|ref|ZP_08340946.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 2_1_46FAA] gi|330402316|gb|EGG81887.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 2_1_46FAA] Length = 361 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +FR + ++ ++F I+ G N GK+++ EAI + R + Sbjct: 3 IKSLKLKNFRNY-DLLNLDFDSATNILYGDNAQGKTNILEAIYLSGTTKSHRGTKDRDMI 61 Query: 89 KRSIK 93 + + Sbjct: 62 RFGQE 66 >gi|194909986|ref|XP_001982050.1| GG11251 [Drosophila erecta] gi|190656688|gb|EDV53920.1| GG11251 [Drosophila erecta] Length = 1238 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|170035857|ref|XP_001845783.1| DNA repair protein RAD50 [Culex quinquefasciatus] gi|167878307|gb|EDS41690.1| DNA repair protein RAD50 [Culex quinquefasciatus] Length = 1292 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +EI R F ++QKI+F LT++ GQNG GK+++ E +++ G Sbjct: 4 ICKLEIRGIRSFGVESEDVQKIKFQSPLTLIVGQNGCGKTTIIECLKYGLTG 55 >gi|104782596|ref|YP_609094.1| hypothetical protein PSEEN3569 [Pseudomonas entomophila L48] gi|95111583|emb|CAK16303.1| hypothetical protein PSEEN3569 [Pseudomonas entomophila L48] Length = 608 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I I +FR ++E I D LT + G+N GKSS+ EA+E F T + GD+ Sbjct: 1 MRLKTIAIKNFRCYSEKVTIPIED-LTTIIGKNDIGKSSILEALEIFFNNETITIEQGDA 59 Query: 87 IKKRSIKTPMPMC 99 S + +C Sbjct: 60 NI-SSEDKSVEIC 71 >gi|290457659|sp|O93309|SMC3_XENLA RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3 gi|63101213|gb|AAH94474.1| Smc3 protein [Xenopus laevis] Length = 1209 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|297588054|ref|ZP_06946698.1| recombination protein F [Finegoldia magna ATCC 53516] gi|297574743|gb|EFH93463.1| recombination protein F [Finegoldia magna ATCC 53516] Length = 355 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ ++R F EI+ ++F D L ++ G+N GK+++ EAI G + + + Sbjct: 3 VQKLKLYNYRNFCEIE-LDFCDGLNLIVGRNASGKTNILEAINVALKGKSFKTNTNSHLI 61 Query: 89 KRSIKTPM 96 K Sbjct: 62 KFGEDEAR 69 >gi|147900881|ref|NP_001083742.1| structural maintenance of chromosomes 3 [Xenopus laevis] gi|27263154|emb|CAD59446.1| structural maintenance of chromosomes protein 3 [Xenopus laevis] Length = 1217 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|24649535|ref|NP_651211.2| SMC1 [Drosophila melanogaster] gi|7301097|gb|AAF56231.1| SMC1 [Drosophila melanogaster] gi|21428690|gb|AAM50005.1| SD02122p [Drosophila melanogaster] Length = 1238 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|74180915|dbj|BAE25655.1| unnamed protein product [Mus musculus] Length = 723 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|332071306|gb|EGI81801.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA17545] Length = 199 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|297158794|gb|ADI08506.1| recombination protein F [Streptomyces bingchenggensis BCW-1] Length = 407 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ ++ + R Sbjct: 1 MHVTHLSLADFRSYA-RAEVALGPGVTAFVGPNGQGKTNLVEAVGYVATLGSHRVSADAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|320088176|emb|CBY97938.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 396 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +AI + Sbjct: 1 MRIDKLSLLNFRCFRQLD-ITFDEHITILVAPNGAGKTTVLDAIRLALF 48 >gi|158291930|ref|XP_313457.3| AGAP003676-PA [Anopheles gambiae str. PEST] gi|157017524|gb|EAA08790.3| AGAP003676-PA [Anopheles gambiae str. PEST] Length = 1294 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +EI R F ++Q+I F LT++ GQNG GK+++ E +++ G Sbjct: 4 INKLEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTG 55 >gi|151944297|gb|EDN62575.1| Mre11-Rad50-Xrs2 protein complex member [Saccharomyces cerevisiae YJM789] Length = 1312 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + + IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTG 53 >gi|148993621|ref|ZP_01823092.1| recombination protein F [Streptococcus pneumoniae SP9-BS68] gi|168489301|ref|ZP_02713500.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP195] gi|147927842|gb|EDK78864.1| recombination protein F [Streptococcus pneumoniae SP9-BS68] gi|183572210|gb|EDT92738.1| DNA replication and repair protein RecF [Streptococcus pneumoniae SP195] gi|332071670|gb|EGI82163.1| DNA replication and repair protein recF [Streptococcus pneumoniae GA17570] Length = 365 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|4324607|gb|AAD16951.1| putative ATP binding protein SugR [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 519 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +AI + Sbjct: 1 MRIDKLSLLNFRCFRQLD-ITFDEHITILVAPNGAGKTTVLDAIRLALF 48 >gi|16767037|ref|NP_462652.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422321|gb|AAL22611.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|267996020|gb|ACY90905.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312914778|dbj|BAJ38752.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226808|gb|EFX51858.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|332990601|gb|AEF09584.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 396 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +AI + Sbjct: 1 MRIDKLSLLNFRCFRQLD-ITFDEHITILVAPNGAGKTTVLDAIRLALF 48 >gi|207343115|gb|EDZ70677.1| YLR086Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 754 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVF-GFRANKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|239826208|ref|YP_002948832.1| SMC domain protein [Geobacillus sp. WCH70] gi|239806501|gb|ACS23566.1| SMC domain protein [Geobacillus sp. WCH70] Length = 1116 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + I+ F E Q I+F + + G G GKS++ +AI +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAITLALFGSVER 58 >gi|119893373|ref|XP_600396.3| PREDICTED: structural maintenance of chromosomes 1B, partial [Bos taurus] Length = 637 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 3 RLEVLFVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|308270740|emb|CBX27350.1| hypothetical protein N47_H21720 [uncultured Desulfobacterium sp.] Length = 622 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 28/50 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +EI+ ++ F + + F+ L ++ G+NG GK+++ +AI + Sbjct: 1 MFLETLEIAGYKNFHKEFTVHFSKGLNVLVGENGVGKTAIIDAIRLILLE 50 >gi|299738507|ref|XP_001838399.2| nuclear condensin complex protein [Coprinopsis cinerea okayama7#130] gi|298403339|gb|EAU83424.2| nuclear condensin complex protein [Coprinopsis cinerea okayama7#130] Length = 1207 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + +I + + G NG GKS++ +AI ++ Sbjct: 1 MRIEELIIEGFKSYPVRTQISGWDPSFNAITGLNGSGKSNILDAICFVLGITNMSVMRAS 60 Query: 86 SIKKRSIK 93 + + K Sbjct: 61 NQQDLIYK 68 >gi|290959001|ref|YP_003490183.1| DNA replication protein [Streptomyces scabiei 87.22] gi|260648527|emb|CBG71638.1| DNA replication protein [Streptomyces scabiei 87.22] Length = 374 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|150401140|ref|YP_001324906.1| SMC domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013843|gb|ABR56294.1| SMC domain protein [Methanococcus aeolicus Nankai-3] Length = 994 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I I +FR + I F +T + G+NG GKSS+ EA+ + + RR Sbjct: 3 IKNINIKNFRSHS-NTDISFKQGITTIIGENGSGKSSIFEAMNYALF--APRRIKLSDAI 59 Query: 89 KRSIK 93 KR Sbjct: 60 KRGTD 64 >gi|54026766|ref|YP_121008.1| putative ATP-dependent dsDNA exonuclease [Nocardia farcinica IFM 10152] gi|54018274|dbj|BAD59644.1| putative ATP-dependent dsDNA exonuclease [Nocardia farcinica IFM 10152] Length = 1060 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 +L +E++ F F + ++F AD L +++GQ G GK+++ +AI + YG Sbjct: 1 MRLHRLEMTAFGPFAQPTVVDFDALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPGAR 60 Query: 79 --QRRKHGD 85 +R H D Sbjct: 61 GESKRLHSD 69 >gi|311070651|ref|YP_003975574.1| recombination protein F [Bacillus atrophaeus 1942] gi|310871168|gb|ADP34643.1| recombination protein F [Bacillus atrophaeus 1942] Length = 370 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + E +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-ERVELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|308171895|ref|YP_003918600.1| DNA repair and genetic recombination factor [Bacillus amyloliquefaciens DSM 7] gi|307604759|emb|CBI41130.1| DNA repair and genetic recombination factor [Bacillus amyloliquefaciens DSM 7] gi|328551704|gb|AEB22196.1| recombination protein F [Bacillus amyloliquefaciens TA208] gi|328909963|gb|AEB61559.1| DNA repair and genetic recombination factor [Bacillus amyloliquefaciens LL3] Length = 370 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + E +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-ERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|300925838|ref|ZP_07141686.1| hypothetical protein HMPREF9548_03883 [Escherichia coli MS 182-1] gi|300418090|gb|EFK01401.1| hypothetical protein HMPREF9548_03883 [Escherichia coli MS 182-1] Length = 540 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + + +FR E Q+I+FA +T++ G N GK+++ A+ +L Sbjct: 1 MKLTKLVLENFRSVRERQEIDFAP-VTLLLGPNSAGKTTILIALFYL 46 >gi|182437496|ref|YP_001825215.1| recombination protein F [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778151|ref|ZP_08237416.1| DNA replication and repair protein recF [Streptomyces cf. griseus XylebKG-1] gi|226737838|sp|B1VPF3|RECF_STRGG RecName: Full=DNA replication and repair protein recF gi|178466012|dbj|BAG20532.1| putative DNA recombination and repair protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658484|gb|EGE43330.1| DNA replication and repair protein recF [Streptomyces cf. griseus XylebKG-1] Length = 376 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|154684522|ref|YP_001419683.1| recombination protein F [Bacillus amyloliquefaciens FZB42] gi|166220699|sp|A7Z0C6|RECF_BACA2 RecName: Full=DNA replication and repair protein recF gi|154350373|gb|ABS72452.1| RecF [Bacillus amyloliquefaciens FZB42] Length = 370 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + E +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-ERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|148669759|gb|EDL01706.1| mCG20864 [Mus musculus] Length = 657 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|29830862|ref|NP_825496.1| recombination protein F [Streptomyces avermitilis MA-4680] gi|51316400|sp|Q82FD5|RECF_STRAW RecName: Full=DNA replication and repair protein recF gi|29607975|dbj|BAC72031.1| putative DNA recombination and repair protein [Streptomyces avermitilis MA-4680] Length = 373 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|21222284|ref|NP_628063.1| recombination protein F [Streptomyces coelicolor A3(2)] gi|256786616|ref|ZP_05525047.1| recombination protein F [Streptomyces lividans TK24] gi|289770509|ref|ZP_06529887.1| recombination protein F [Streptomyces lividans TK24] gi|548717|sp|P36176|RECF_STRCO RecName: Full=DNA replication and repair protein recF gi|436025|gb|AAA65213.1| putative [Streptomyces coelicolor A3(2)] gi|8247658|emb|CAB92996.1| DNA replication protein [Streptomyces coelicolor A3(2)] gi|289700708|gb|EFD68137.1| recombination protein F [Streptomyces lividans TK24] gi|1093582|prf||2104262B recF gene Length = 373 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|313682334|ref|YP_004060072.1| smc domain protein [Sulfuricurvum kujiense DSM 16994] gi|313155194|gb|ADR33872.1| SMC domain protein [Sulfuricurvum kujiense DSM 16994] Length = 785 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +F+ + E + I F L + G+NG GKS++ + + + YG Sbjct: 1 MTLESLRLQNFKRYAEYE-ITFESGLCGILGRNGRGKSTIFDGVFFALYG 49 >gi|254414789|ref|ZP_05028553.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196178278|gb|EDX73278.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 1006 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H + G NG GKSSL EAI W +G + D I Sbjct: 4 LKLTLKNFLSYRE-TTLDFRGLHTACICGANGAGKSSLLEAITWAIWGQCRAASEDDLI 61 >gi|162452485|ref|YP_001614852.1| hypothetical protein sce4209 [Sorangium cellulosum 'So ce 56'] gi|161163067|emb|CAN94372.1| hypothetical protein sce4209 [Sorangium cellulosum 'So ce 56'] Length = 418 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + KL + I FRG ++ F+D L ++ GQNG GK++L E I + + Sbjct: 1 MLKLRRLRIEKFRGVAPGTELRFSDGLNVLLGQNGTGKTTLLELISMVVRSDFSSLAREE 60 Query: 86 SIKKRSIKTPMPMCMAV 102 + + P + V Sbjct: 61 FAVEYELAVPEEATVTV 77 >gi|169858554|ref|XP_001835922.1| RAD50 [Coprinopsis cinerea okayama7#130] gi|116503092|gb|EAU85987.1| RAD50 [Coprinopsis cinerea okayama7#130] gi|157428273|gb|ABV56236.1| RAD50 [Coprinopsis cinerea] Length = 1309 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R F + Q IEF +T++ G NG GK+++ E +++ G G Sbjct: 4 LNKLAIRGIRSFDDKQISVIEFFSPVTVIVGHNGSGKTTIIECLKYATTGEQPPNTRG 61 >gi|302824711|ref|XP_002993996.1| hypothetical protein SELMODRAFT_137981 [Selaginella moellendorffii] gi|300138158|gb|EFJ04936.1| hypothetical protein SELMODRAFT_137981 [Selaginella moellendorffii] Length = 1172 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + F + G NG GKS++ ++I ++ + Sbjct: 1 MFVKEISLEGFKSYATSTFVSNFDPCFNAITGLNGSGKSNILDSICFVLGITKLEQVRAS 60 Query: 86 SIKKRSIKT 94 ++ + K Sbjct: 61 NLNELVYKQ 69 >gi|194764821|ref|XP_001964527.1| GF23004 [Drosophila ananassae] gi|190614799|gb|EDV30323.1| GF23004 [Drosophila ananassae] Length = 1236 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRR 81 I L IE+ +F+ + + V G NG GKS+ +AI ++ T +R Sbjct: 24 IAFLQFIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKR 83 Query: 82 KHG 84 + Sbjct: 84 LND 86 >gi|29336525|sp|P97690|SMC3_RAT RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3; AltName: Full=Basement membrane-associated chondroitin proteoglycan; Short=Bamacan; AltName: Full=Chondroitin sulfate proteoglycan 6; AltName: Full=Chromosome segregation protein SmcD gi|1785540|gb|AAB96342.1| basement membrane-associated chondroitin proteoglycan Bamacan [Rattus norvegicus] Length = 1191 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|22299718|ref|NP_682965.1| hypothetical protein tlr2175 [Thermosynechococcus elongatus BP-1] gi|22295902|dbj|BAC09727.1| tlr2175 [Thermosynechococcus elongatus BP-1] Length = 1003 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + HL + G NG GKSSL EAI W +G ++ + D I Sbjct: 4 RQLVLRNFLSYRQATLPFAGLHLACICGANGAGKSSLLEAIAWALWGQSRASREDDVIYY 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 ++ + +V Y++ Sbjct: 64 GEMEAQVTFEFSVQGQTYRV 83 >gi|302205160|gb|ADL09502.1| Recombination protein F [Corynebacterium pseudotuberculosis C231] gi|302329718|gb|ADL19912.1| Recombination protein F [Corynebacterium pseudotuberculosis 1002] gi|308275401|gb|ADO25300.1| Recombination protein F [Corynebacterium pseudotuberculosis I19] Length = 404 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + + + +T+ G+NG+GK+++ EAI ++ + + R Sbjct: 1 MYIRELSLRDFRSWADCH-VNLEPGVTVFVGRNGFGKTNIVEAIGYIAHLGSHRVSQDSP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + AV Sbjct: 60 LVHQGKDSARVSVTAV 75 >gi|209946214|gb|ACI97338.1| SMC1 [Drosophila simulans] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|126657418|ref|ZP_01728577.1| recombination protein F [Cyanothece sp. CCY0110] gi|126621405|gb|EAZ92117.1| recombination protein F [Cyanothece sp. CCY0110] Length = 380 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I + FR + E Q + TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKNIHLYTFRNY-EEQSLNLQSQKTILLGNNAQGKSNLLEAVELLATLKSHRTNRDRD 59 Query: 87 IKKRSIKT 94 + +T Sbjct: 60 LILEGERT 67 >gi|323476197|gb|ADX81435.1| Rad50 recombination repair enzyme like protein [Sulfolobus islandicus HVE10/4] Length = 864 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EQSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|301300481|ref|ZP_07206680.1| DNA replication and repair protein RecF [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851928|gb|EFK79613.1| DNA replication and repair protein RecF [Lactobacillus salivarius ACS-116-V-Col5a] Length = 379 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + E + F+ + ++ G+N GK++L E+I L + R + Sbjct: 1 MYLEKLELKHFRNY-EDVNVAFSPQVNVLIGKNAQGKTNLLESIYVLAMARSHRTSNDRE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|302543961|ref|ZP_07296303.1| RecF protein [Streptomyces hygroscopicus ATCC 53653] gi|302461579|gb|EFL24672.1| RecF protein [Streptomyces himastatinicus ATCC 53653] Length = 383 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RAEVALGPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|149280201|ref|ZP_01886324.1| ATP binding protein [Pedobacter sp. BAL39] gi|149229038|gb|EDM34434.1| ATP binding protein [Pedobacter sp. BAL39] Length = 462 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +E+++ RGFT K+EF ++ G NG GK+++ EA+ Sbjct: 1 MRINTLELTNVRGFT-HAKLEFQPGFNLIVGINGVGKTTVLEALRISMT 48 >gi|46138859|ref|XP_391120.1| hypothetical protein FG10944.1 [Gibberella zeae PH-1] Length = 1493 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + + +F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 208 LTHLILENFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 264 >gi|261416065|ref|YP_003249748.1| hypothetical protein Fisuc_1671 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372521|gb|ACX75266.1| hypothetical protein Fisuc_1671 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 664 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 8/75 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I++ +FR + + ++F ++TI+ G+NG GK++ ++ W YG T Sbjct: 1 MLLESIKLHNFRQYRD-AFLDFAQDVHGKNVTIIIGENGSGKTTFLQSFFWCLYGIT--N 57 Query: 82 KHGDSIKKRSIKTPM 96 + +S+ + M Sbjct: 58 FKDSVVLNKSVASEM 72 >gi|91773466|ref|YP_566158.1| SMC-like protein [Methanococcoides burtonii DSM 6242] gi|91712481|gb|ABE52408.1| DNA-binding Structural Maintenance of Chromosomes Protein with ATPase domain [Methanococcoides burtonii DSM 6242] Length = 888 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + + R + ++ I F D +T+V+G NG GKSSL EA +G R D Sbjct: 1 MKLKRVRVENIRSYIDLD-ISFDDGVTVVSGVNGSGKSSLLEACFTGLFGS--RALSKDF 57 Query: 87 IK 88 + Sbjct: 58 VI 59 >gi|300857420|ref|YP_003782403.1| DNA replication and repair protein [Corynebacterium pseudotuberculosis FRC41] gi|300684874|gb|ADK27796.1| DNA replication and repair protein [Corynebacterium pseudotuberculosis FRC41] Length = 421 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++ + FR + + + +T+ G+NG+GK+++ EAI ++ + + R Sbjct: 16 ITVYIRELSLRDFRSWADCH-VNLEPGVTVFVGRNGFGKTNIVEAIGYIAHLGSHRVSQD 74 Query: 85 DSIKKRSIKTPMPMCMAV 102 + + + AV Sbjct: 75 SPLVHQGKDSARVSVTAV 92 >gi|114326984|ref|YP_744141.1| recombination protein F [Granulibacter bethesdensis CGDNIH1] gi|114315158|gb|ABI61218.1| DNA replication and repair protein recF [Granulibacter bethesdensis CGDNIH1] Length = 373 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + + L V G NG GK++L EAI L G R D + Sbjct: 8 IRTLTLTRFRNYAALAWSP-PPGLVGVVGPNGSGKTNLLEAISLLSPGRGLRNARTDQLA 66 Query: 89 KRS 91 ++ Sbjct: 67 RQG 69 >gi|81294371|gb|AAI08195.1| SMC1B protein [Bos taurus] Length = 174 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 3 RLEVLFVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|296472599|gb|DAA14714.1| structural maintenance of chromosomes protein 3 [Bos taurus] Length = 1217 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|227891672|ref|ZP_04009477.1| recombination protein F [Lactobacillus salivarius ATCC 11741] gi|227866475|gb|EEJ73896.1| recombination protein F [Lactobacillus salivarius ATCC 11741] Length = 379 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + E + F+ + ++ G+N GK++L E+I L + R + Sbjct: 1 MYLEKLELKHFRNY-EDVNVAFSPQVNVLIGKNAQGKTNLLESIYVLAMARSHRTSNDRE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|209946210|gb|ACI97336.1| SMC1 [Drosophila yakuba] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|170104320|ref|XP_001883374.1| condensin complex subunit SMC2 [Laccaria bicolor S238N-H82] gi|164641827|gb|EDR06086.1| condensin complex subunit SMC2 [Laccaria bicolor S238N-H82] Length = 1206 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I F+ + I + + G NG GKS++ +AI ++ + Sbjct: 1 MRIEELVIEGFKSYPVRTTITGWDPSFNAITGLNGSGKSNILDAICFVLGITNMSQMRAA 60 Query: 86 SIKKRSIK 93 + + K Sbjct: 61 NQQDLIYK 68 >gi|164423145|ref|XP_958567.2| hypothetical protein NCU09063 [Neurospora crassa OR74A] gi|157069967|gb|EAA29331.2| hypothetical protein NCU09063 [Neurospora crassa OR74A] Length = 1650 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + +F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 305 ITNLVLINFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 361 >gi|94733235|emb|CAK04581.1| chondroitin sulfate proteoglycan 6 (bamacan) [Danio rerio] gi|94733720|emb|CAK04291.1| chondroitin sulfate proteoglycan 6 (bamacan) [Danio rerio] Length = 1216 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|27805841|ref|NP_776720.1| structural maintenance of chromosomes protein 3 [Bos taurus] gi|29336596|sp|O97594|SMC3_BOVIN RecName: Full=Structural maintenance of chromosomes protein 3; Short=SMC protein 3; Short=SMC-3; AltName: Full=Chondroitin sulfate proteoglycan 6 gi|4235255|gb|AAD13142.1| SMC3 protein [Bos taurus] Length = 1218 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|255944429|ref|XP_002562982.1| Pc20g04350 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587717|emb|CAP85764.1| Pc20g04350 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1308 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + ++ +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 99 APKPRMIIENLILTNFKSYAGQQIVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASK 158 Query: 81 RKHG 84 + G Sbjct: 159 MRQG 162 >gi|90960994|ref|YP_534910.1| recombination protein F [Lactobacillus salivarius UCC118] gi|122449496|sp|Q1WVP2|RECF_LACS1 RecName: Full=DNA replication and repair protein recF gi|90820188|gb|ABD98827.1| DNA replication and repair protein [Lactobacillus salivarius UCC118] gi|300213942|gb|ADJ78358.1| DNA replication and repair protein recF [Lactobacillus salivarius CECT 5713] Length = 379 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + E + F+ + ++ G+N GK++L E+I L + R + Sbjct: 1 MYLEKLELKHFRNY-EDVNVAFSPQVNVLIGKNAQGKTNLLESIYVLAMARSHRTSNDRE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|72383256|ref|YP_292611.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A] gi|72003106|gb|AAZ58908.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A] Length = 1183 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I D T+V G NG GKS++ + + + R D + Sbjct: 2 SIPLEDGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRADRLPDL 47 >gi|258652591|ref|YP_003201747.1| exonuclease SbcC [Nakamurella multipartita DSM 44233] gi|258555816|gb|ACV78758.1| exonuclease SbcC [Nakamurella multipartita DSM 44233] Length = 1099 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F + ++FAD ++ G G GKS++ +A+ + YG R Sbjct: 1 MRPVRLQMNGFAAFRDEAVVDFADADFFVLVGATGSGKSTVIDALTFALYGTVPR 55 >gi|119475982|ref|ZP_01616334.1| exonuclease SbcC, putative [marine gamma proteobacterium HTCC2143] gi|119450609|gb|EAW31843.1| exonuclease SbcC, putative [marine gamma proteobacterium HTCC2143] Length = 1019 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F + ++F ++ L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MKPLSLTLQAFGPFAGKESLDFAALGSNPLFLINGATGAGKSSILDAICFALYGQTTGAE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RDPAQMRCDFSEP 73 >gi|297261296|ref|XP_002798460.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 2 [Macaca mulatta] Length = 1160 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ T Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTI 54 >gi|296127873|ref|YP_003635123.1| DNA replication and repair protein RecF [Cellulomonas flavigena DSM 20109] gi|296019688|gb|ADG72924.1| DNA replication and repair protein RecF [Cellulomonas flavigena DSM 20109] Length = 398 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T + G NG GK++L EA+ ++ + R + Sbjct: 1 MYVAHLSLTDFRSYP-QVELPLEPGITALVGPNGQGKTNLVEAVGYVATLGSHRVPSDAA 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRAG 64 >gi|209946264|gb|ACI97363.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946244|gb|ACI97353.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|183230377|ref|XP_657185.2| mitotic chromosome and X-chromosome-associated protein [Entamoeba histolytica HM-1:IMSS] gi|169802951|gb|EAL51799.2| mitotic chromosome and X-chromosome-associated protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1151 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + I +F + G NG GKS++ +AI ++ Sbjct: 1 MFIEEVLIDGFKSYARKTTIGKFDSKFNAITGLNGSGKSNILDAICFVMGIQNLSLVRVQ 60 Query: 86 SIKKRSIKT 94 ++++ K+ Sbjct: 61 TLQELIYKS 69 >gi|55378582|ref|YP_136432.1| chromosome segregation protein [Haloarcula marismortui ATCC 43049] gi|55231307|gb|AAV46726.1| structural maintenance of chromosomes [Haloarcula marismortui ATCC 43049] Length = 908 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 10/79 (12%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 MT R+ + +C S K +++S+F+ + + + + +T+++G NG Sbjct: 1 MTTARRASRSSCNGGS---------TMKFQRVKLSNFKCY-DDADLRLDNGVTVIHGLNG 50 Query: 61 YGKSSLSEAIEWLFYGYTQ 79 GKSSL EA + YG Sbjct: 51 SGKSSLLEACFFALYGSKA 69 >gi|68075435|ref|XP_679636.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500430|emb|CAI04824.1| hypothetical protein PB000032.03.0 [Plasmodium berghei] Length = 250 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ ++ I+ I F + + G NG GKS++ +A+ ++F G ++ + + Sbjct: 67 IEKLILENFKSYSGIKIIGPFYKKFSCIVGPNGSGKSNIIDAMLFVF-GRRAKKIRQNKL 125 Query: 88 KKRSIKTPMPMC 99 + Sbjct: 126 SDLIHNSKYSTN 137 >gi|325954682|ref|YP_004238342.1| DNA replication and repair protein recF [Weeksella virosa DSM 16922] gi|323437300|gb|ADX67764.1| DNA replication and repair protein recF [Weeksella virosa DSM 16922] Length = 359 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ F+ FTE EF+ + + G NG GK++L +AI +L + H D+ Sbjct: 1 MYLRLLKARQFKNFTESD-FEFSPKINAIVGPNGLGKTNLLDAIHYLALSKSYLN-HSDA 58 Query: 87 I 87 + Sbjct: 59 M 59 >gi|225621318|ref|YP_002722576.1| putative recombinational DNA repair ATPase [Brachyspira hyodysenteriae WA1] gi|225216138|gb|ACN84872.1| putative recombinational DNA repair ATPase (RecF pathway) [Brachyspira hyodysenteriae WA1] Length = 355 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + FR + E EF+D + ++ G NG GK+++ EAI L G + R + + Sbjct: 3 LKELTLRSFRNYNENI-FEFSDKINVLYGHNGCGKTNILEAIYMLGNGVSFRTRLDRELV 61 Query: 89 KRSIK 93 K Sbjct: 62 KNGND 66 >gi|167462211|ref|ZP_02327300.1| DNA exonuclease [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383649|ref|ZP_08057400.1| DNA ATP-dependent repair enzyme-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151861|gb|EFX44804.1| DNA ATP-dependent repair enzyme-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 1150 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S + + E Q+++F + + G G GKS+L +AI YG +R Sbjct: 1 MRPITLTLSGLQSYREKQEVDFTRLCDAGVFGIFGPTGSGKSTLLDAITLALYGKVERAS 60 Query: 83 HG 84 G Sbjct: 61 SG 62 >gi|145294046|ref|YP_001136867.1| recombination protein F [Corynebacterium glutamicum R] gi|166220708|sp|A4Q9S2|RECF_CORGB RecName: Full=DNA replication and repair protein recF gi|140843966|dbj|BAF52965.1| hypothetical protein [Corynebacterium glutamicum R] Length = 394 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ +R + E+ K++ +T+ G+NG+GK+++ EAI +L + + R Sbjct: 1 MHIRSLELRDYRSWPEL-KVDLEPGITVFIGRNGFGKTNIVEAIGYLAHLSSHRVSSDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + +AV Sbjct: 60 LVRAHAENARVSAVAV 75 >gi|19551253|ref|NP_599255.1| recombination protein F [Corynebacterium glutamicum ATCC 13032] gi|62388896|ref|YP_224298.1| recombination protein F [Corynebacterium glutamicum ATCC 13032] gi|51316227|sp|Q6M8X7|RECF_CORGL RecName: Full=DNA replication and repair protein recF gi|21322768|dbj|BAB97397.1| Recombinational DNA repair ATPase [Corynebacterium glutamicum ATCC 13032] gi|41324229|emb|CAF18569.1| DNA REPAIR AND GENETIC RECOMBINATION PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 394 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ +R + E+ K++ +T+ G+NG+GK+++ EAI +L + + R Sbjct: 1 MHIRSLELRDYRSWPEL-KVDLEPGITVFIGRNGFGKTNIVEAIGYLAHLSSHRVSSDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + +AV Sbjct: 60 LVRAHAENARVSAVAV 75 >gi|145608106|ref|XP_360835.2| hypothetical protein MGG_03378 [Magnaporthe oryzae 70-15] gi|145015607|gb|EDK00097.1| hypothetical protein MGG_03378 [Magnaporthe oryzae 70-15] Length = 1465 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 198 ITYLIMTNFKSYAGRQEVGPFHSSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 254 >gi|313792565|gb|EFS40651.1| recombination protein F [Propionibacterium acnes HL110PA1] gi|313803566|gb|EFS44748.1| recombination protein F [Propionibacterium acnes HL110PA2] gi|313839625|gb|EFS77339.1| recombination protein F [Propionibacterium acnes HL086PA1] gi|314963870|gb|EFT07970.1| recombination protein F [Propionibacterium acnes HL082PA1] gi|315078996|gb|EFT51008.1| recombination protein F [Propionibacterium acnes HL053PA2] gi|327457411|gb|EGF04066.1| recombination protein F [Propionibacterium acnes HL092PA1] Length = 401 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A TI G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMAAGATIFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|302535569|ref|ZP_07287911.1| recombination protein F [Streptomyces sp. C] gi|302444464|gb|EFL16280.1| recombination protein F [Streptomyces sp. C] Length = 378 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ A +T G NG GK++L EAI +L + R Sbjct: 1 MHVSHLSLADFRSYA-RAEVPLAPGVTAFVGPNGQGKTNLVEAIGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|196248136|ref|ZP_03146838.1| SMC domain protein [Geobacillus sp. G11MC16] gi|196212920|gb|EDY07677.1| SMC domain protein [Geobacillus sp. G11MC16] Length = 1114 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I+ F E Q I+F + + G G GKS++ +AI +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFTVLCDGGVFGIFGPTGSGKSTILDAITLALFGSVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|138894265|ref|YP_001124718.1| YirY [Geobacillus thermodenitrificans NG80-2] gi|134265778|gb|ABO65973.1| YirY [Geobacillus thermodenitrificans NG80-2] Length = 1114 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I+ F E Q I+F + + G G GKS++ +AI +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFTVLCDGGVFGIFGPTGSGKSTILDAITLALFGSVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|39971565|ref|XP_367173.1| hypothetical protein MGG_07098 [Magnaporthe oryzae 70-15] gi|145019566|gb|EDK03794.1| hypothetical protein MGG_07098 [Magnaporthe oryzae 70-15] Length = 1179 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +I I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVTEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 + + K Sbjct: 61 NQQDLIYK 68 >gi|319411488|emb|CBQ73532.1| related to SMC4-Stable Maintenance of Chromosomes [Sporisorium reilianum] Length = 1644 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG--- 84 + + ++ F+ + Q+I F + V G NG GKS++ +++ ++F + + G Sbjct: 266 IHKMVLNDFKSYAGRQEIGPFHKSFSSVVGPNGSGKSNVIDSLLFVFGWRATKMRQGKLS 325 Query: 85 DSIKKRSIKTPMPMC 99 + I + K +P C Sbjct: 326 ELIHNSAGKENLPQC 340 >gi|305681507|ref|ZP_07404314.1| RecF/RecN/SMC N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305659712|gb|EFM49212.1| RecF/RecN/SMC N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 679 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +FR F+E +++F + + G N GK+++ + I +L Sbjct: 1 MYLSKLTLKNFRQFSEEDPLEVDFQPGVVALAGPNDSGKTAIIDGIRYLLRT 52 >gi|209946222|gb|ACI97342.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|291526543|emb|CBK92130.1| recF protein [Eubacterium rectale DSM 17629] gi|291529186|emb|CBK94772.1| recF protein [Eubacterium rectale M104/1] Length = 362 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++S+FR + E I F I+ G N GK+++ EA + + + Sbjct: 3 IKSIQLSNFRNY-EKLDISFDSETNIIYGDNAQGKTNILEAAYLSGTTKSHKGSKDKEMI 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGED 66 >gi|209946256|gb|ACI97359.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|156042456|ref|XP_001587785.1| hypothetical protein SS1G_11025 [Sclerotinia sclerotiorum 1980] gi|154695412|gb|EDN95150.1| hypothetical protein SS1G_11025 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1360 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 207 ITYLILTNFKSYAGRQEVGPFHSSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 263 >gi|124028052|ref|YP_001013372.1| Rad50 [Hyperthermus butylicus DSM 5456] gi|123978746|gb|ABM81027.1| predicted Rad50 [Hyperthermus butylicus DSM 5456] Length = 887 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +E+ +F K+E + V G NG GK+S+ +AI + + R Sbjct: 3 IEAVELENFLSHR-YTKVELGRGIVAVVGPNGAGKTSIVDAITYALFNIHSRDTR 56 >gi|119593787|gb|EAW73381.1| SMC1 structural maintenance of chromosomes 1-like 2 (yeast), isoform CRA_a [Homo sapiens] Length = 1260 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|87125317|ref|ZP_01081163.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. RS9917] gi|86167086|gb|EAQ68347.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. RS9917] Length = 1185 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I T+V G NG GKS++ + + + T R D + Sbjct: 2 SIPLEPGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRADRLPDL 47 >gi|224102947|ref|XP_002312865.1| condensin complex components subunit [Populus trichocarpa] gi|222849273|gb|EEE86820.1| condensin complex components subunit [Populus trichocarpa] Length = 1205 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I F+ + E E F+ + V G NG GK++ AI ++ Q ++ D Sbjct: 1 MHIKQVIIEGFKSYREQIATEPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRNDD 60 >gi|297709151|ref|XP_002831307.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 2 [Pongo abelii] Length = 1235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|297709149|ref|XP_002831306.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 1 [Pongo abelii] Length = 1235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|256848503|ref|ZP_05553945.1| DNA replication and repair protein RecF [Lactobacillus coleohominis 101-4-CHN] gi|256714770|gb|EEU29749.1| DNA replication and repair protein RecF [Lactobacillus coleohominis 101-4-CHN] Length = 374 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + + K+ F+ + I+ G+N GK++L EAI L + R + Sbjct: 3 LQEMHLKHFRNY-DELKVVFSPGINILIGENAQGKTNLLEAIHVLALTKSHRTSKDRELI 61 Query: 89 KRSIKT 94 + K Sbjct: 62 QWKHKQ 67 >gi|258577137|ref|XP_002542750.1| structural maintenance of chromosome 2 [Uncinocarpus reesii 1704] gi|237903016|gb|EEP77417.1| structural maintenance of chromosome 2 [Uncinocarpus reesii 1704] Length = 1179 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|167395675|ref|XP_001741701.1| DNA double-strand break repair Rad50 ATPase [Entamoeba dispar SAW760] gi|165893697|gb|EDR21837.1| DNA double-strand break repair Rad50 ATPase, putative [Entamoeba dispar SAW760] Length = 1135 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ I F+ + I +F + G NG GKS++ +AI ++ Sbjct: 1 MFIEEVLIDGFKSYARKTTIGKFDSKFNAITGLNGSGKSNILDAICFVMGIQNLSLVRVQ 60 Query: 86 SIKKRSIKT 94 ++++ K+ Sbjct: 61 TLQELIYKS 69 >gi|160901575|ref|YP_001567156.1| exonuclease sbcC [Petrotoga mobilis SJ95] gi|160359219|gb|ABX30833.1| exonuclease sbcC [Petrotoga mobilis SJ95] Length = 1039 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + ++ F F E Q+I+F D L ++ G G GK+++ +AI + YG + Sbjct: 1 MKPIKLKFQAFGPFLEEQEIDFNKLRNDTLFLITGPTGAGKTTIFDAICYALYGNGSMDE 60 Query: 83 HGDSIKKR 90 GD+I + Sbjct: 61 RGDAIARS 68 >gi|48427624|emb|CAD43404.2| SMC1beta protein [Homo sapiens] Length = 1235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|71565160|ref|NP_683515.3| structural maintenance of chromosomes protein 1B [Homo sapiens] Length = 1235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|312194728|ref|YP_004014789.1| exonuclease SbcC [Frankia sp. EuI1c] gi|311226064|gb|ADP78919.1| exonuclease SbcC [Frankia sp. EuI1c] Length = 1115 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E++ F F + ++FAD + G G GKS++ +A+ + +G R Sbjct: 6 LEMAGFGSFRDAATVDFADADYFALVGPTGSGKSTVFDAMTFALFGSVPR 55 >gi|209946258|gb|ACI97360.1| SMC1 [Drosophila melanogaster] gi|209946262|gb|ACI97362.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946228|gb|ACI97345.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946216|gb|ACI97339.1| SMC1 [Drosophila melanogaster] gi|209946218|gb|ACI97340.1| SMC1 [Drosophila simulans] gi|209946224|gb|ACI97343.1| SMC1 [Drosophila melanogaster] gi|209946226|gb|ACI97344.1| SMC1 [Drosophila melanogaster] gi|209946230|gb|ACI97346.1| SMC1 [Drosophila melanogaster] gi|209946232|gb|ACI97347.1| SMC1 [Drosophila melanogaster] gi|209946234|gb|ACI97348.1| SMC1 [Drosophila melanogaster] gi|209946236|gb|ACI97349.1| SMC1 [Drosophila melanogaster] gi|209946248|gb|ACI97355.1| SMC1 [Drosophila melanogaster] gi|209946252|gb|ACI97357.1| SMC1 [Drosophila melanogaster] gi|209946254|gb|ACI97358.1| SMC1 [Drosophila melanogaster] gi|209946260|gb|ACI97361.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|313888329|ref|ZP_07822000.1| RecF/RecN/SMC N-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845732|gb|EFR33122.1| RecF/RecN/SMC N-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 483 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + ++E+++F+ +IEF L ++ G + GK+++ AI+W + GD Sbjct: 1 MIYIKNVELTNFQSHN-HTEIEFDRGLNVILGNSDAGKTAILRAIKWALFNEP----KGD 55 Query: 86 SIKKRSIK 93 ++ + Sbjct: 56 YFIRQGER 63 >gi|213966253|ref|ZP_03394437.1| DNA replication and repair protein RecF [Corynebacterium amycolatum SK46] gi|213951105|gb|EEB62503.1| DNA replication and repair protein RecF [Corynebacterium amycolatum SK46] Length = 399 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E++ +EF +T+ GQNGYGK+++ EA+ +L + R Sbjct: 1 MHIRYLSLRDFRSWPELE-VEFTPGITVFTGQNGYGKTNIVEAVGYLSTLGSHRVSMDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + + AV Sbjct: 60 LVRSGTPSARISATAV 75 >gi|119593789|gb|EAW73383.1| SMC1 structural maintenance of chromosomes 1-like 2 (yeast), isoform CRA_c [Homo sapiens] Length = 1247 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|91084903|ref|XP_969783.1| PREDICTED: similar to RAD50 homolog [Tribolium castaneum] gi|270009233|gb|EFA05681.1| rad50 [Tribolium castaneum] Length = 1309 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEI----QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L ++IS R F Q I+FA LT++ GQNG GK+++ EAI+++ + +G Sbjct: 4 LERLQISGVRSFGPNEEHCQTIKFATPLTLILGQNGSGKTTIIEAIKYVCTAELPQGTNG 63 >gi|296328619|ref|ZP_06871136.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154218|gb|EFG95019.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 602 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL +++ +FRG+ E +EF ++LT G+N GKS++ EA+E F T + + D Sbjct: 1 MKLKQLKLKNFRGYKEENYVEF-ENLTAFVGKNDVGKSTILEALEIFFNNKTVQCERED 58 >gi|291527878|emb|CBK93464.1| Predicted ATPase [Eubacterium rectale M104/1] Length = 234 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 17 LTSYYARKLIFKLLDIE----ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + + + +++IF I+ + F I+K++F +T G+NG GKS+L EA+ Sbjct: 1 MNNQFIQRVIFDWNRIDNDSYLKGIEAFKGIEKLDFNKPITFFVGENGSGKSTLLEALA- 59 Query: 73 LFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 + +G+ + + + T +C A+ Sbjct: 60 VAHGFNPEGGTKNYV-FSTHDTHSELCDAI 88 >gi|238925706|ref|YP_002939223.1| hypothetical protein EUBREC_3363 [Eubacterium rectale ATCC 33656] gi|238877382|gb|ACR77089.1| Hypothetical protein EUBREC_3363 [Eubacterium rectale ATCC 33656] gi|291524089|emb|CBK89676.1| Predicted ATPase [Eubacterium rectale DSM 17629] Length = 238 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 17 LTSYYARKLIFKLLDIE----ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + + + +++IF I+ + F I+K++F +T G+NG GKS+L EA+ Sbjct: 1 MNNQFIQRVIFDWNRIDNDSYLKGIEAFKGIEKLDFNKPITFFVGENGSGKSTLLEALA- 59 Query: 73 LFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 + +G+ + + + T +C A+ Sbjct: 60 VAHGFNPEGGTKNYV-FSTHDTHSELCDAI 88 >gi|227486418|ref|ZP_03916734.1| exonuclease sbcC [Anaerococcus lactolyticus ATCC 51172] gi|227235599|gb|EEI85614.1| exonuclease sbcC [Anaerococcus lactolyticus ATCC 51172] Length = 1012 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ +++ F + + I+F + +++G G GK+++ +AI + YG R Sbjct: 1 MKVRKVKLRGFLTYKDEVTIDFTRLFDKKIFLISGPTGSGKTTIFDAISFALYGEVPREI 60 Query: 83 HGDSIK 88 + ++ Sbjct: 61 AMEDLR 66 >gi|45383133|ref|NP_989849.1| structural maintenance of chromosomes protein 4 [Gallus gallus] gi|26801168|emb|CAD58707.1| condensin complex subunit [Gallus gallus] Length = 1274 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +A+ ++F GY ++ + Sbjct: 55 ITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVIDAMLFVF-GYRAQKIRSKKL 113 >gi|57015410|sp|Q8NDV3|SMC1B_HUMAN RecName: Full=Structural maintenance of chromosomes protein 1B; Short=SMC protein 1B; Short=SMC-1-beta; Short=SMC-1B gi|168985288|emb|CAQ08671.1| structural maintenance of chromosomes 1B [Homo sapiens] Length = 1235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|209946242|gb|ACI97352.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946220|gb|ACI97341.1| SMC1 [Drosophila melanogaster] gi|209946246|gb|ACI97354.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|325567925|ref|ZP_08144426.1| ATP-dependent OLD family endonuclease [Enterococcus casseliflavus ATCC 12755] gi|325158399|gb|EGC70549.1| ATP-dependent OLD family endonuclease [Enterococcus casseliflavus ATCC 12755] Length = 373 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++I +FR + +I F D +T G NG GKSS+ A++W F Y + D Sbjct: 1 MKIKSVKIKNFRALRD-VQIGFED-ITTFIGPNGAGKSSIMYALDWFFNAYGKNNNLSDD 58 >gi|313115029|ref|ZP_07800520.1| exonuclease SbcC [Faecalibacterium cf. prausnitzii KLE1255] gi|310622648|gb|EFQ06112.1| exonuclease SbcC [Faecalibacterium cf. prausnitzii KLE1255] Length = 934 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + +E A L +V G G GK++L +AI + Y ++ Sbjct: 1 MRPLKLTLSAFGPYAAETVLELAKLGRGGLYLVTGDTGAGKTTLFDAITYALYDHSSGGV 60 Query: 83 HGDSIKKRSIKTPM 96 ++ + P Sbjct: 61 REGTMLRCKYAGPK 74 >gi|304437929|ref|ZP_07397875.1| recombination protein F [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369069|gb|EFM22748.1| recombination protein F [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 372 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ + +R + E + F + I G N GK+++ EA+ + +G + R Sbjct: 1 MQITELTLRSYRSY-ETLHLAFDPGVQIFLGANAQGKTNIIEALYYAAFGRSHRTSSDAE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|301165374|emb|CBW24945.1| putative DNA replication and repair protein RecF [Bacteriovorax marinus SJ] Length = 370 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 FK+ +++++FR + IEF + + G+NG GK+++ EA+ + RK+ Sbjct: 4 FKISKLQVTNFRNL-QPDIIEFNSGINCILGENGNGKTNILEALH-VLSTRKSFRKNTAF 61 Query: 87 IKKRSIKTPMP 97 + I P Sbjct: 62 PQFLGIDCEQP 72 >gi|229164443|ref|ZP_04292371.1| DNA replication and repair protein recF [Bacillus cereus R309803] gi|228619048|gb|EEK75946.1| DNA replication and repair protein recF [Bacillus cereus R309803] Length = 375 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNY-EKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|260817162|ref|XP_002603456.1| hypothetical protein BRAFLDRAFT_80430 [Branchiostoma floridae] gi|229288775|gb|EEN59467.1| hypothetical protein BRAFLDRAFT_80430 [Branchiostoma floridae] Length = 1155 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +A+ ++F GY ++ I Sbjct: 12 ITHIVNENFKSYAGKKILGPFHKSFSCIVGPNGSGKSNVIDAMLFVF-GYRAQKIRSKKI 70 >gi|209946250|gb|ACI97356.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946240|gb|ACI97351.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|209946238|gb|ACI97350.1| SMC1 [Drosophila melanogaster] Length = 306 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|149040398|gb|EDL94436.1| chondroitin sulfate proteoglycan 6, isoform CRA_a [Rattus norvegicus] Length = 696 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|127510938|ref|YP_001092135.1| DNA replication and repair protein RecF [Shewanella loihica PV-4] gi|166221864|sp|A3Q8S8|RECF_SHELP RecName: Full=DNA replication and repair protein recF gi|126636233|gb|ABO21876.1| DNA replication and repair protein RecF [Shewanella loihica PV-4] Length = 360 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR +++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLSRLHIDSFRNIAS-AQLQLGDGLNLIYGQNGSGKTSILEAIFFLGMGRSFRS 54 >gi|145481615|ref|XP_001426830.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393907|emb|CAK59432.1| unnamed protein product [Paramecium tetraurelia] Length = 1256 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +++ +F+ F + T + G NG GKS++ +AI+++ G + R Sbjct: 41 KIKGMKVCNFKSFENEHFVGPFTKFTSIIGPNGGGKSNVLDAIQFVL-GISIRSMR 95 >gi|74830393|emb|CAI39061.1| Structural maintenance of chromosomes 1 [Paramecium tetraurelia] Length = 1267 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +++ +F+ F + T + G NG GKS++ +AI+++ G + R Sbjct: 41 KIKGMKVCNFKSFENEHFVGPFTKFTSIIGPNGGGKSNVLDAIQFVL-GISIRSMR 95 >gi|307184041|gb|EFN70591.1| DNA repair protein RAD50 [Camponotus floridanus] Length = 1368 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 28 KLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + R F + + I F+ LT++ G NG GK+++ EA+++ G Sbjct: 3 KIRKLSLRGIRNFGDDNEDSLIRFSCPLTLILGPNGTGKTTIIEALKYATTG 54 >gi|300777028|ref|ZP_07086886.1| recombination protein F [Chryseobacterium gleum ATCC 35910] gi|300502538|gb|EFK33678.1| recombination protein F [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + +F+ TE K EF+ + G NG GK+++ +A+ +L G + Sbjct: 3 IKKLSLYNFKNHTEK-KFEFSPQINCFVGNNGVGKTNILDALHYLSVGKS 51 >gi|269860026|ref|XP_002649736.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348] gi|220066795|gb|EED44266.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348] Length = 1180 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L+ ++I R F + +IEF LT++ GQNG GK+++ E +++L G Sbjct: 1 MIRLISLDIKGIRSFDPHKSNRIEFDVPLTLIVGQNGTGKTTIIECLKYLTTG 53 >gi|167816393|ref|ZP_02448073.1| chromosome segregation protein SMC [Burkholderia pseudomallei 91] Length = 519 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 57 GQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK---KRSIKTPMP 97 G NG GKS++ +A+ W+ G+S++ T P Sbjct: 2 GPNGCGKSNIIDAVRWVLGESRASELRGESMQDVIFNGSTTRKP 45 >gi|167739182|ref|ZP_02411956.1| chromosome segregation protein SMC [Burkholderia pseudomallei 14] Length = 504 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 57 GQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK---KRSIKTPMP 97 G NG GKS++ +A+ W+ G+S++ T P Sbjct: 2 GPNGCGKSNIIDAVRWVLGESRASELRGESMQDVIFNGSTTRKP 45 >gi|167720179|ref|ZP_02403415.1| chromosome segregation protein SMC [Burkholderia pseudomallei DM98] Length = 429 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 57 GQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK---KRSIKTPMP 97 G NG GKS++ +A+ W+ G+S++ T P Sbjct: 2 GPNGCGKSNIIDAVRWVLGESRASELRGESMQDVIFNGSTTRKP 45 >gi|313894734|ref|ZP_07828295.1| DNA replication and repair protein RecF [Selenomonas sp. oral taxon 137 str. F0430] gi|312976643|gb|EFR42097.1| DNA replication and repair protein RecF [Selenomonas sp. oral taxon 137 str. F0430] Length = 373 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +R + EI + F + I G N GK+++ EA+ + +G + R Sbjct: 1 MRITRLELHSYRNY-EILDLRFDPGVQIFLGANAQGKTNIIEALYYASFGRSHRTTSDAE 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRMG 64 >gi|257069836|ref|YP_003156091.1| DNA repair ATPase [Brachybacterium faecium DSM 4810] gi|256560654|gb|ACU86501.1| ATPase involved in DNA repair [Brachybacterium faecium DSM 4810] Length = 1022 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + ++ F I+FA + ++ G G GKS++ +AI + YG Sbjct: 1 MKLHHLRLTGIGPFAGTVSIDFAALGAGGMFLLEGPTGSGKSTILDAIVYALYGQVAGTA 60 Query: 83 HGDSIKKRSIKTPMP 97 + P Sbjct: 61 TSADRIRSQFAPPTE 75 >gi|212715153|ref|ZP_03323281.1| hypothetical protein BIFCAT_00039 [Bifidobacterium catenulatum DSM 16992] gi|212661834|gb|EEB22409.1| hypothetical protein BIFCAT_00039 [Bifidobacterium catenulatum DSM 16992] Length = 400 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + E ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MYISRLALDHYRSW-EHCVLDFEPGINILQGANGLGKTNIVEAVEVLSTGSSHR 53 >gi|152973858|ref|YP_001373375.1| recombination protein F [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039617|sp|A7GJS2|RECF_BACCN RecName: Full=DNA replication and repair protein recF gi|152022610|gb|ABS20380.1| DNA replication and repair protein RecF [Bacillus cytotoxicus NVH 391-98] Length = 373 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + ++ + F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFISEIQLKNYRNYEDLN-LSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|284928773|ref|YP_003421295.1| DNA replication and repair protein RecF [cyanobacterium UCYN-A] gi|284809232|gb|ADB94937.1| DNA replication and repair protein RecF [cyanobacterium UCYN-A] Length = 380 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I + FR + Q + TI+ G N GKS+L EAIE L + R + Sbjct: 1 MYLKNIHLYTFRNYY-KQSVNLQSQKTILLGNNAQGKSNLLEAIELLATLKSHRTRRDQD 59 Query: 87 IKKRSIKT 94 + K+ Sbjct: 60 LILEGEKS 67 >gi|269837877|ref|YP_003320105.1| SMC domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787140|gb|ACZ39283.1| SMC domain protein [Sphaerobacter thermophilus DSM 20745] Length = 850 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F + E +I+F + ++G NG GKS+L +AI W +G + D I Sbjct: 4 TRLAIRNFMSYREPVEIDFRGIRVACLSGDNGAGKSALLDAITWALWGKARVNSDRDLI 62 >gi|119498053|ref|XP_001265784.1| nuclear condensin complex subunit Smc4, putative [Neosartorya fischeri NRRL 181] gi|119413948|gb|EAW23887.1| nuclear condensin complex subunit Smc4, putative [Neosartorya fischeri NRRL 181] Length = 1440 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 239 ITHLVLTNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 295 >gi|322377917|ref|ZP_08052405.1| DNA replication and repair protein RecF [Streptococcus sp. M334] gi|321281093|gb|EFX58105.1| DNA replication and repair protein RecF [Streptococcus sp. M334] Length = 365 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHISLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLSLTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDEEQ 67 >gi|312218512|emb|CBX98458.1| similar to nuclear condensin complex subunit Smc4 [Leptosphaeria maculans] Length = 1492 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 288 ITWLVLNNFKSYAGRQEVGPFHASFSAVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 344 >gi|302380115|ref|ZP_07268588.1| DNA replication and repair protein RecF [Finegoldia magna ACS-171-V-Col3] gi|302312057|gb|EFK94065.1| DNA replication and repair protein RecF [Finegoldia magna ACS-171-V-Col3] Length = 355 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ ++R F EI+ ++F D L ++ G+N GK+++ EAI G + + + Sbjct: 3 VQKLKLYNYRNFCEIE-LDFCDGLNLIVGRNASGKTNILEAINVALKGKSFKTNTNSHLI 61 Query: 89 KRSIKTPM 96 K Sbjct: 62 KFGEDEAR 69 >gi|297625652|ref|YP_003687415.1| ATP-dependent dsDNA exonuclease SbcC [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921417|emb|CBL55970.1| ATP-dependent dsDNA exonuclease SbcC [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1054 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++L +E+S + + ++F+ D L ++ G G GK+++ +AI + YG Sbjct: 1 MQILRLELSGIGPYAGTEHVDFSRLGADGLFLLEGATGSGKTTIIDAIVFALYGQVAA-- 58 Query: 83 HGDSIKKRSIKTPM 96 DS R + T Sbjct: 59 -DDSSGDRMVSTHR 71 >gi|229014659|ref|ZP_04171773.1| DNA replication and repair protein recF [Bacillus mycoides DSM 2048] gi|229065152|ref|ZP_04200445.1| DNA replication and repair protein recF [Bacillus cereus AH603] gi|229170196|ref|ZP_04297882.1| DNA replication and repair protein recF [Bacillus cereus AH621] gi|228613297|gb|EEK70436.1| DNA replication and repair protein recF [Bacillus cereus AH621] gi|228716181|gb|EEL67900.1| DNA replication and repair protein recF [Bacillus cereus AH603] gi|228746670|gb|EEL96559.1| DNA replication and repair protein recF [Bacillus mycoides DSM 2048] Length = 375 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFITEIQLKNYRNY-EHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|261368841|ref|ZP_05981724.1| DNA replication and repair protein RecF [Subdoligranulum variabile DSM 15176] gi|282569111|gb|EFB74646.1| DNA replication and repair protein RecF [Subdoligranulum variabile DSM 15176] Length = 367 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E++ R ++ +LT++ G NG GK++L EA+ L G + R Sbjct: 1 MRLEHLELTDHRNIAHAV-LDPDPNLTVLCGPNGQGKTNLLEAVWLLTGGKSFRGAKDAE 59 Query: 87 IKKRSIK 93 + +R + Sbjct: 60 LIRRGCE 66 >gi|240143648|ref|ZP_04742249.1| putative DNA sulfur modification protein DndD [Roseburia intestinalis L1-82] gi|257204404|gb|EEV02689.1| putative DNA sulfur modification protein DndD [Roseburia intestinalis L1-82] Length = 672 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K I +++F + IEF+ ++T+V G N GK+++++A W+ YG Sbjct: 1 MKFQSITMNNFMRYKGQNVIEFSCDEKRNVTVVLGDNTVGKTTIAQAFRWVLYG 54 >gi|225352382|ref|ZP_03743405.1| hypothetical protein BIFPSEUDO_03999 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156889|gb|EEG70258.1| hypothetical protein BIFPSEUDO_03999 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 419 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + E ++F + I+ G NG GK+++ EAIE L G + R Sbjct: 1 MYISRLALDHYRSW-EHCVLDFKPGINILQGANGLGKTNIVEAIEVLSTGSSHR 53 >gi|71983162|gb|AAZ57431.1| structural maintenance of chromosome 2 [Toxoplasma gondii] Length = 1186 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +++A K + I + F+ ++ + V G NG GKS++ ++I ++ Sbjct: 18 AFFAEK--MYIEAIVLEGFKSYSNRVYVGPLHPQFNAVTGLNGTGKSNILDSICFVLGIT 75 Query: 78 TQRRKHGDSIKKRSIKT 94 + K Sbjct: 76 NHALVRATKLDDLVYKQ 92 >gi|163938017|ref|YP_001642901.1| recombination protein F [Bacillus weihenstephanensis KBAB4] gi|229136318|ref|ZP_04265065.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST196] gi|226737772|sp|A9VM93|RECF_BACWK RecName: Full=DNA replication and repair protein recF gi|163860214|gb|ABY41273.1| DNA replication and repair protein RecF [Bacillus weihenstephanensis KBAB4] gi|228647190|gb|EEL03278.1| DNA replication and repair protein recF [Bacillus cereus BDRD-ST196] Length = 375 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I++ ++R + E ++ F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MFITEIQLKNYRNY-EHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|326926166|ref|XP_003209275.1| PREDICTED: structural maintenance of chromosomes protein 4-like [Meleagris gallopavo] Length = 1300 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +A+ ++F GY ++ + Sbjct: 81 ITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVIDAMLFVF-GYRAQKIRSKKL 139 >gi|289615285|emb|CBI58052.1| putative SMC4/CSM1 protein [Sordaria macrospora] Length = 1644 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + +F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 304 ITNLVLINFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 360 >gi|169823701|ref|YP_001691312.1| DNA replication and repair protein [Finegoldia magna ATCC 29328] gi|303234454|ref|ZP_07321092.1| DNA replication and repair protein RecF [Finegoldia magna BVS033A4] gi|167830506|dbj|BAG07422.1| DNA replication and repair protein [Finegoldia magna ATCC 29328] gi|302494409|gb|EFL54177.1| DNA replication and repair protein RecF [Finegoldia magna BVS033A4] Length = 355 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ ++R F EI+ ++F D L ++ G+N GK+++ EAI G + + + Sbjct: 3 VQKLKLYNYRNFCEIE-LDFCDGLNLIVGRNASGKTNILEAINVALKGKSFKTNTNSHLI 61 Query: 89 KRSIKTPM 96 K Sbjct: 62 KFGEDEAR 69 >gi|228995400|ref|ZP_04155072.1| DNA replication and repair protein recF [Bacillus mycoides Rock3-17] gi|229003014|ref|ZP_04160873.1| DNA replication and repair protein recF [Bacillus mycoides Rock1-4] gi|228758242|gb|EEM07428.1| DNA replication and repair protein recF [Bacillus mycoides Rock1-4] gi|228764353|gb|EEM13228.1| DNA replication and repair protein recF [Bacillus mycoides Rock3-17] Length = 375 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ ++R + E + F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIKELQLKNYRNY-EYLDLSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|121710752|ref|XP_001272992.1| nuclear condensin complex subunit Smc4, putative [Aspergillus clavatus NRRL 1] gi|119401142|gb|EAW11566.1| nuclear condensin complex subunit Smc4, putative [Aspergillus clavatus NRRL 1] Length = 1441 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 239 ITHLVLTNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 295 >gi|293364503|ref|ZP_06611228.1| recombination protein F [Streptococcus oralis ATCC 35037] gi|307702791|ref|ZP_07639741.1| DNA replication and repair protein recF [Streptococcus oralis ATCC 35037] gi|291317011|gb|EFE57439.1| recombination protein F [Streptococcus oralis ATCC 35037] gi|307623647|gb|EFO02634.1| DNA replication and repair protein recF [Streptococcus oralis ATCC 35037] Length = 363 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-AKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDNEQ 67 >gi|218550116|ref|YP_002383907.1| hypothetical protein EFER_2804 [Escherichia fergusonii ATCC 35469] gi|218357657|emb|CAQ90298.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] Length = 682 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L ++I FR F + I + L+++ G+NG GKS++ +I LF R + Sbjct: 47 MFLSKLKIKGFRCFNDEFNISLNEGLSVIVGENGAGKSAIINSIRQLFIDSESERYN 103 >gi|171679495|ref|XP_001904694.1| hypothetical protein [Podospora anserina S mat+] gi|170939373|emb|CAP64601.1| unnamed protein product [Podospora anserina S mat+] Length = 1587 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 261 ITYLVLTNFKSYAGKQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 317 >gi|152991417|ref|YP_001357139.1| hypothetical protein NIS_1676 [Nitratiruptor sp. SB155-2] gi|151423278|dbj|BAF70782.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 684 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + FR F + Q + ++ +++G+NG GK++L EA W YG Sbjct: 1 MFLKTLVLEDFRQFKDRQILNLTTTNEKNIVLIHGENGAGKTTLLEAFSWCLYG 54 >gi|213402735|ref|XP_002172140.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212000187|gb|EEB05847.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 1331 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + +L+ + ++ + +F+ + Q I F + + G NG GKS++ +A+ ++F G+ Sbjct: 129 FKSRLVVR--ELRLHNFKSYAGTQIIGPFDYSFSAIVGPNGSGKSNVIDALLFVF-GFRA 185 Query: 80 RRKHGDSI 87 + + Sbjct: 186 SKLRQSKL 193 >gi|146322765|ref|XP_749352.2| nuclear condensin complex subunit Smc4 [Aspergillus fumigatus Af293] gi|129556791|gb|EAL87314.2| nuclear condensin complex subunit Smc4, putative [Aspergillus fumigatus Af293] Length = 1441 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 239 ITHLVLTNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 295 >gi|145521847|ref|XP_001446773.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414262|emb|CAK79376.1| unnamed protein product [Paramecium tetraurelia] Length = 1295 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + +I F T + G NG GKS+L E++ ++F Sbjct: 13 INRIILDNFKSYYGHLEIGPFHHQFTSIVGPNGSGKSNLIESLLFVFG 60 >gi|87120177|ref|ZP_01076073.1| Purine NTPase [Marinomonas sp. MED121] gi|86164879|gb|EAQ66148.1| Purine NTPase [Marinomonas sp. MED121] Length = 786 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++L + ++F+ F E I F + L + +G NG+GK+++ +AIE G +R Sbjct: 4 LYRLEKLTFNNFKLFGEEFTINFSGNELVVFDGPNGHGKTTVYDAIELALTGGIRR 59 >gi|74830387|emb|CAI39060.1| Structural maintenance of chromosomes 3 [Paramecium tetraurelia] Length = 1287 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + +I F T + G NG GKS+L E++ ++F Sbjct: 13 INRIILDNFKSYYGHLEIGPFHHQFTSIVGPNGSGKSNLIESLLFVFG 60 >gi|159128766|gb|EDP53880.1| nuclear condensin complex subunit Smc4, putative [Aspergillus fumigatus A1163] Length = 1441 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 239 ITHLVLTNFKSYAGKQIVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 295 >gi|269962981|ref|ZP_06177319.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832343|gb|EEZ86464.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 1018 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + IEF + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAQTETIEFDKLGTNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RQGIQMRCDMAAP 73 >gi|156976878|ref|YP_001447784.1| DNA repair exonuclease [Vibrio harveyi ATCC BAA-1116] gi|156528472|gb|ABU73557.1| hypothetical protein VIBHAR_05654 [Vibrio harveyi ATCC BAA-1116] Length = 1018 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + IEF + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAQTETIEFDKLGTNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RQGIQMRCDMAAP 73 >gi|153832093|ref|ZP_01984760.1| ATPase involved in DNA repair [Vibrio harveyi HY01] gi|148871708|gb|EDL70549.1| ATPase involved in DNA repair [Vibrio harveyi HY01] Length = 1018 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + IEF + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAQTETIEFDKLGTNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RQGIQMRCDMAAP 73 >gi|74216698|dbj|BAE37767.1| unnamed protein product [Mus musculus] Length = 353 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|322375204|ref|ZP_08049718.1| DNA replication and repair protein RecF [Streptococcus sp. C300] gi|321280704|gb|EFX57743.1| DNA replication and repair protein RecF [Streptococcus sp. C300] Length = 365 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-AKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDNEQ 67 >gi|297709153|ref|XP_002831308.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 3 [Pongo abelii] Length = 1161 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|255732057|ref|XP_002550952.1| hypothetical protein CTRG_05250 [Candida tropicalis MYA-3404] gi|240131238|gb|EER30798.1| hypothetical protein CTRG_05250 [Candida tropicalis MYA-3404] Length = 1377 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q I F + V G NG GKS++ +++ ++F + + G Sbjct: 150 IRQLALTNFKSYAGTQIIGPFHPSFSSVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 206 >gi|228994211|ref|ZP_04154111.1| DNA replication and repair protein recF [Bacillus pseudomycoides DSM 12442] gi|228765663|gb|EEM14317.1| DNA replication and repair protein recF [Bacillus pseudomycoides DSM 12442] Length = 375 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ ++R + E + F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIKELQLKNYRNY-EYLDLSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|225377588|ref|ZP_03754809.1| hypothetical protein ROSEINA2194_03238 [Roseburia inulinivorans DSM 16841] gi|225210564|gb|EEG92918.1| hypothetical protein ROSEINA2194_03238 [Roseburia inulinivorans DSM 16841] Length = 363 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +FR + ++ I F + I G N GK+++ EA + + + Sbjct: 3 IKSIELQNFRNYEDLN-ISFDEGTNIFYGDNAQGKTNILEAAYLSGTTKSHKCSKDKEMI 61 Query: 89 KRSIKTPMPMCMAVPRCK-YQL 109 + + + V + K YQ+ Sbjct: 62 RFGEQESHIRTVVVKKEKEYQI 83 >gi|168985289|emb|CAQ08672.1| structural maintenance of chromosomes 1B [Homo sapiens] Length = 1161 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|116497135|gb|AAI26209.1| SMC1B protein [Homo sapiens] Length = 1161 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|186682009|ref|YP_001865205.1| exonuclease SbcC [Nostoc punctiforme PCC 73102] gi|186464461|gb|ACC80262.1| exonuclease SbcC [Nostoc punctiforme PCC 73102] Length = 1008 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +F + + ++F H ++G NG GKSSL EAI W +G ++ D I Sbjct: 5 QLILKNFLSYRDAT-LDFRGLHTACISGSNGAGKSSLLEAITWAIWGESRATAEDDVIYS 63 Query: 90 RSIKTPMPMCMAVPRCKYQL 109 + + + + KY++ Sbjct: 64 GAKEVRVDFTFQSNQQKYRV 83 >gi|329924050|ref|ZP_08279313.1| exonuclease SbcCD, C subunit [Paenibacillus sp. HGF5] gi|328940889|gb|EGG37197.1| exonuclease SbcCD, C subunit [Paenibacillus sp. HGF5] Length = 1147 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +++S + + Q+I+F L + G G GKS+L +AI YG +R +G Sbjct: 6 LKLSGLQSYRSTQEIDFETLCETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNG 62 >gi|315645970|ref|ZP_07899091.1| SMC domain protein [Paenibacillus vortex V453] gi|315278731|gb|EFU42045.1| SMC domain protein [Paenibacillus vortex V453] Length = 1151 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +++S + + Q+I+F L + G G GKS+L +AI YG +R +G Sbjct: 6 LKLSGLQSYRSTQEIDFETLCETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNG 62 >gi|238922436|ref|YP_002935949.1| DNA replication and repair protein RecF [Eubacterium rectale ATCC 33656] gi|259563365|sp|C4Z940|RECF_EUBR3 RecName: Full=DNA replication and repair protein recF gi|238874108|gb|ACR73815.1| DNA replication and repair protein RecF [Eubacterium rectale ATCC 33656] Length = 362 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++S+FR + E I F I+ G N GK+++ EA + + + Sbjct: 3 IKSIQLSNFRNY-EKLDISFDTETNIIYGDNAQGKTNILEAAYLSGTTKSHKGSKDKEMI 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGED 66 >gi|237784640|ref|YP_002905345.1| DNA replication and repair protein RecF [Corynebacterium kroppenstedtii DSM 44385] gi|237757552|gb|ACR16802.1| DNA replication and repair protein RecF [Corynebacterium kroppenstedtii DSM 44385] Length = 429 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ + +T+ +G NG+GK+++ EA++++ + + R Sbjct: 1 MYIRALQLRNFRSWPELD-LHLGPGITVFSGPNGHGKTNVVEALDYVAHLGSHRVSTDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVREGRE 66 >gi|261405602|ref|YP_003241843.1| SMC domain-containing protein [Paenibacillus sp. Y412MC10] gi|261282065|gb|ACX64036.1| SMC domain protein [Paenibacillus sp. Y412MC10] Length = 1147 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +++S + + Q+I+F L + G G GKS+L +AI YG +R +G Sbjct: 6 LKLSGLQSYRSTQEIDFETLCETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAVNG 62 >gi|167548992|ref|ZP_02342751.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325625|gb|EDZ13464.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 465 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +AI + Sbjct: 1 MRINKLSLLNFRCFRQLD-ITFDEHITILVAPNGAGKTTVLDAIRLTLF 48 >gi|323473551|gb|ADX84157.1| recombination repair enzyme Rad50 like protein [Sulfolobus islandicus REY15A] Length = 864 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|319945993|ref|ZP_08020242.1| recombination protein F [Streptococcus australis ATCC 700641] gi|319747801|gb|EFW00046.1| recombination protein F [Streptococcus australis ATCC 700641] Length = 362 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I I FR + + ++F L I GQN GK++L E+I +L + R + Sbjct: 1 MWLKSIHIQKFRNYKD-VDLQFHSGLNIFLGQNAQGKTNLLESIYFLALTRSHRTRSDKD 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFQEEQ 67 >gi|241952959|ref|XP_002419201.1| structural maintenance of chromosomes protein, putative; subunit of the multiprotein Cohesin complex required for sister chromatid cohesion in mitotic cells, putative [Candida dubliniensis CD36] gi|223642541|emb|CAX42790.1| structural maintenance of chromosomes protein, putative [Candida dubliniensis CD36] Length = 1232 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MYIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVL 49 >gi|32450573|gb|AAH54173.1| Unknown (protein for IMAGE:6875131) [Xenopus laevis] Length = 348 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|75674202|ref|YP_316623.1| recombination protein F [Nitrobacter winogradskyi Nb-255] gi|74419072|gb|ABA03271.1| DNA replication and repair protein RecF [Nitrobacter winogradskyi Nb-255] Length = 385 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + E ++ ++ G NG GK++ EAI L G RR D I Sbjct: 9 RVRRLSLTHFRNYRAAT-FETRSNMIVLVGPNGAGKTNCLEAISLLSPGRGLRRATRDDI 67 Query: 88 KK 89 Sbjct: 68 AD 69 >gi|320095110|ref|ZP_08026819.1| recombination protein F [Actinomyces sp. oral taxon 178 str. F0338] gi|319977977|gb|EFW09611.1| recombination protein F [Actinomyces sp. oral taxon 178 str. F0338] Length = 395 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + FR + + +EF T++ G NG GK++L EAI +L + R + Sbjct: 1 MRVSHLALDDFRSW-KRGLVEFPPGATVLVGANGQGKTNLVEAIAYLSTFSSHRVGAESA 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|312952556|ref|ZP_07771421.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0102] gi|310629457|gb|EFQ12740.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0102] gi|315153433|gb|EFT97449.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0031] Length = 486 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 25/56 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +F+ F I F + G N GK+++ +A+E+L G + Sbjct: 6 LYISKLILKNFKSFEGEHVITFTRGINFFVGNNNSGKTTIFKAVEFLRNGKYEDSL 61 >gi|304436813|ref|ZP_07396779.1| possible exonuclease sbcc [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370185|gb|EFM23844.1| possible exonuclease sbcc [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 1026 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + I F + + Q ++F +++G G GK+++ +AI + YG + Sbjct: 1 MRPLKLRIQAFGSYVDEQILDFETALADAPFLLIHGVTGSGKTTILDAIVFALYGESSGD 60 Query: 82 KHGDSIKKRSIKTP 95 ++ + S P Sbjct: 61 IREGAMLRSSTAPP 74 >gi|284175980|ref|ZP_06389949.1| hypothetical protein Ssol98_15165 [Sulfolobus solfataricus 98/2] Length = 363 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++I +F+ + + + EF ++IV G NG GK++L +A +L Sbjct: 2 IKRLKIKNFKSYRDSE-FEFEK-VSIVVGPNGSGKTNLVDAFSFL 44 >gi|15898789|ref|NP_343394.1| hypothetical protein SSO1994 [Sulfolobus solfataricus P2] gi|13815272|gb|AAK42184.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] Length = 328 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++I +F+ + + + EF ++IV G NG GK++L +A +L Sbjct: 2 IKRLKIKNFKSYRDSE-FEFEK-VSIVVGPNGSGKTNLVDAFSFL 44 >gi|254412109|ref|ZP_05025884.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196181075|gb|EDX76064.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 382 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + + + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKCLKLRQFRNYRDCL-VNFEAPKTILVGNNAQGKSNLLEAVELLSTLKSHRSGRDRE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|195037076|ref|XP_001989991.1| GH18490 [Drosophila grimshawi] gi|193894187|gb|EDV93053.1| GH18490 [Drosophila grimshawi] Length = 1240 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LQFIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|15922327|ref|NP_377996.1| hypothetical protein ST2010 [Sulfolobus tokodaii str. 7] gi|15623116|dbj|BAB67105.1| 382aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 382 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + I +F+ + + + EF + +V G NG GK++L +A +L Sbjct: 16 IKRLAIKNFKSYRDAE-FEFGK-VNVVVGPNGSGKTNLVDAFSFL 58 >gi|312130769|ref|YP_003998109.1| DNA replication and repair protein recf [Leadbetterella byssophila DSM 17132] gi|311907315|gb|ADQ17756.1| DNA replication and repair protein RecF [Leadbetterella byssophila DSM 17132] Length = 354 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L ++ + +FR + E F+ L + G+NG GK++L +A+ +L + Sbjct: 1 MYLQNLRLYNFRNYEERF-FTFSPTLNCIVGKNGSGKTNLLDAVYFLALSKS 51 >gi|294630341|ref|ZP_06708901.1| RecF protein [Streptomyces sp. e14] gi|292833674|gb|EFF92023.1| RecF protein [Streptomyces sp. e14] Length = 373 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RAEVPLDPGVTAFVGPNGQGKTNLVEAVGYLAALGSHRVATDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRMGAD 66 >gi|238926600|ref|ZP_04658360.1| possible recombination protein RecF [Selenomonas flueggei ATCC 43531] gi|238885546|gb|EEQ49184.1| possible recombination protein RecF [Selenomonas flueggei ATCC 43531] Length = 377 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ + +R + E + F + I G N GK+++ EA+ + +G + R Sbjct: 1 MQITELTLRSYRSY-ETLHLAFDPGVQIFLGANAQGKTNIIEALYYAAFGRSHRTSSDAE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRVGAD 66 >gi|146319836|ref|YP_001199548.1| recombination protein F [Streptococcus suis 05ZYH33] gi|146322027|ref|YP_001201738.1| recombination protein F [Streptococcus suis 98HAH33] gi|253752812|ref|YP_003025953.1| DNA replication and repair protein RecF [Streptococcus suis SC84] gi|253754637|ref|YP_003027778.1| DNA replication and repair protein RecF [Streptococcus suis P1/7] gi|253756570|ref|YP_003029710.1| DNA replication and repair protein RecF [Streptococcus suis BM407] gi|166221874|sp|A4W4P9|RECF_STRS2 RecName: Full=DNA replication and repair protein recF gi|166221876|sp|A4VYF9|RECF_STRSY RecName: Full=DNA replication and repair protein recF gi|145690642|gb|ABP91148.1| Recombinational DNA repair ATPase (RecF pathway) [Streptococcus suis 05ZYH33] gi|145692833|gb|ABP93338.1| Recombinational DNA repair ATPase (RecF pathway) [Streptococcus suis 98HAH33] gi|251817101|emb|CAZ52753.1| DNA replication and repair protein RecF [Streptococcus suis SC84] gi|251819034|emb|CAZ56881.1| DNA replication and repair protein RecF [Streptococcus suis BM407] gi|251820883|emb|CAR47649.1| DNA replication and repair protein RecF [Streptococcus suis P1/7] gi|292559432|gb|ADE32433.1| RecF protein [Streptococcus suis GZ1] gi|319759228|gb|ADV71170.1| recombination protein F [Streptococcus suis JS14] Length = 364 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + ++ IEF L + G+N GK+++ E+I L + R + Sbjct: 1 MWLERLELQHFRNYNQLD-IEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LLQFQEK 66 >gi|223932878|ref|ZP_03624874.1| DNA replication and repair protein RecF [Streptococcus suis 89/1591] gi|330833788|ref|YP_004402613.1| DNA replication and repair protein RecF [Streptococcus suis ST3] gi|223898459|gb|EEF64824.1| DNA replication and repair protein RecF [Streptococcus suis 89/1591] gi|329308011|gb|AEB82427.1| DNA replication and repair protein RecF [Streptococcus suis ST3] Length = 364 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ HFR + ++ IEF L + G+N GK+++ E+I L + R + Sbjct: 1 MWLERLELQHFRNYNQLD-IEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LLQFQEK 66 >gi|288560428|ref|YP_003423914.1| hypothetical protein mru_1172 [Methanobrevibacter ruminantium M1] gi|288543138|gb|ADC47022.1| hypothetical protein mru_1172 [Methanobrevibacter ruminantium M1] Length = 117 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 F + ++EI FRG ++ K +F ++ G NG GKSS+++A E+LF G Sbjct: 5 FNIKELEIRSFRGIKDL-KYDFEGKSLVLCGPNGCGKSSITQAFEYLFTGQVA 56 >gi|238618542|ref|YP_002913367.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.4] gi|238379611|gb|ACR40699.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.4] Length = 864 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|228470633|ref|ZP_04055489.1| RecF/RecN/SMC N domain protein [Porphyromonas uenonis 60-3] gi|228307641|gb|EEK16620.1| RecF/RecN/SMC N domain protein [Porphyromonas uenonis 60-3] Length = 680 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK---- 82 + +I+I +FR F E I F + + ++ G N GKS+L AI + R Sbjct: 1 MYIKEIKILNFRNFKE-ALIPFHEGVNVIIGHNNTGKSNLLRAIGLVLGYNYGHRLGVSD 59 Query: 83 --HGDSIKKRSIKTPM 96 + + ++P Sbjct: 60 LFYETDLAVLQQQSPR 75 >gi|229577881|ref|YP_002836279.1| Rad50 zinc hook domain protein [Sulfolobus islandicus Y.G.57.14] gi|228008595|gb|ACP44357.1| Rad50 zinc hook domain protein [Sulfolobus islandicus Y.G.57.14] Length = 864 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|227826474|ref|YP_002828253.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.14.25] gi|229583636|ref|YP_002842137.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.27] gi|227458269|gb|ACP36955.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.14.25] gi|228018685|gb|ACP54092.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.27] Length = 864 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|227829083|ref|YP_002830862.1| Rad50 zinc hook domain protein [Sulfolobus islandicus L.S.2.15] gi|284996470|ref|YP_003418237.1| Rad50 zinc hook [Sulfolobus islandicus L.D.8.5] gi|227455530|gb|ACP34217.1| Rad50 zinc hook domain protein [Sulfolobus islandicus L.S.2.15] gi|284444365|gb|ADB85867.1| Rad50 zinc hook [Sulfolobus islandicus L.D.8.5] Length = 864 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I +++F E +I F + ++ GQNG GKSS+ + I + + R + + Sbjct: 1 MRIDKITLTNFLSH-EHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNL 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I+K S K + + ++ + K ++ Sbjct: 60 IRKGSNKASVTLHLSNEKDKIEI 82 >gi|116668572|ref|YP_829505.1| recombination protein F [Arthrobacter sp. FB24] gi|166220698|sp|A0JQT5|RECF_ARTS2 RecName: Full=DNA replication and repair protein recF gi|116608681|gb|ABK01405.1| DNA replication and repair protein RecF [Arthrobacter sp. FB24] Length = 401 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + + +T++ G NG GK++L EAI +L + R Sbjct: 1 MYLEKLSLTDFRSYA-QVDLTLEPGVTVLVGYNGIGKTNLMEAIGYLATLSSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LLRFGTE 66 >gi|291279978|ref|YP_003496813.1| DNA repair protein RecN [Deferribacter desulfuricans SSM1] gi|290754680|dbj|BAI81057.1| DNA repair protein RecN [Deferribacter desulfuricans SSM1] Length = 547 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++I +F F + IEF + L I+ G+ G GKS L +AI+ + + K D K Sbjct: 2 IRYLKIKNFSVF-DETSIEFENGLNIITGETGAGKSVLIDAIKMVLGDRFSKEKQRDLAK 60 Query: 89 K 89 K Sbjct: 61 K 61 >gi|258623436|ref|ZP_05718439.1| ATPase involved in DNA repair [Vibrio mimicus VM573] gi|258584251|gb|EEW08997.1| ATPase involved in DNA repair [Vibrio mimicus VM573] Length = 1013 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLTLQAFGPFAGREVIDFTELGDAPLFLINGPTGAGKSSILDAICYALYGETTGNE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|256374164|ref|YP_003097824.1| recombination protein F [Actinosynnema mirum DSM 43827] gi|255918467|gb|ACU33978.1| DNA replication and repair protein RecF [Actinosynnema mirum DSM 43827] Length = 371 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ FR + E + F + ++ G+NG+GK++L EA+ ++ + R Sbjct: 1 MYVRHLQVTDFRSW-EHADLAFEPGVNVLVGRNGHGKTNLVEALGYVATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRSGAQ 66 >gi|257057112|ref|YP_003134944.1| DNA repair ATPase [Saccharomonospora viridis DSM 43017] gi|256586984|gb|ACU98117.1| ATPase involved in DNA repair [Saccharomonospora viridis DSM 43017] Length = 986 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 +L +E+ F + + ++F AD L +++G G GK++L +A+ + +G Sbjct: 1 MRLHRLEVCAFGPYAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAVAFALFGAVPGAR 60 Query: 79 --QRRKHGD 85 +R D Sbjct: 61 GQVKRLRCD 69 >gi|229083318|ref|ZP_04215680.1| DNA replication and repair protein recF [Bacillus cereus Rock3-44] gi|228699993|gb|EEL52616.1| DNA replication and repair protein recF [Bacillus cereus Rock3-44] Length = 245 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ ++R + E + F D + ++ G+N GK++L EAI L + R + Sbjct: 1 MYITELQLKNYRNY-EYLDLSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|27817689|emb|CAD61116.1| hypothetical protein [Cupriavidus oxalaticus] Length = 712 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + ++R F K+ F + + G+NG GK++L AI L R + Sbjct: 1 MHISKLGLVNYRNFA-NTKLLFQKGINTIIGENGSGKTNLFRAIRLLLDDNMIRSAY 56 >gi|24374372|ref|NP_718415.1| exonuclease SbcC, putative [Shewanella oneidensis MR-1] gi|24348932|gb|AAN55859.1|AE015722_9 exonuclease SbcC, putative [Shewanella oneidensis MR-1] Length = 1018 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F F Q I+F + L ++NG G GK++L + I + YG T + Sbjct: 1 MKPLQLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGISFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|194467406|ref|ZP_03073393.1| DNA replication and repair protein RecF [Lactobacillus reuteri 100-23] gi|194454442|gb|EDX43339.1| DNA replication and repair protein RecF [Lactobacillus reuteri 100-23] Length = 374 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + ++ + F + ++ G N GK+++ EAI L + R + + Sbjct: 3 LTELHLHHFRNYQDLT-VHFNPGVNVLIGHNAQGKTNMLEAIYVLSLTKSHRTSNDHELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWQEKS 67 >gi|227543722|ref|ZP_03973771.1| recombination protein F [Lactobacillus reuteri CF48-3A] gi|300908787|ref|ZP_07126250.1| recombination protein F [Lactobacillus reuteri SD2112] gi|77745333|gb|ABB02567.1| recombinational DNA repair ATPase [Lactobacillus reuteri] gi|227186290|gb|EEI66361.1| recombination protein F [Lactobacillus reuteri CF48-3A] gi|300894194|gb|EFK87552.1| recombination protein F [Lactobacillus reuteri SD2112] Length = 374 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + ++ + F + ++ G N GK+++ EAI L + R + + Sbjct: 3 LTELHLHHFRNYQDLT-VHFNPGVNVLIGHNAQGKTNMLEAIYVLSLTKSHRTSNDHELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWQEKS 67 >gi|148543247|ref|YP_001270617.1| recombination protein F [Lactobacillus reuteri DSM 20016] gi|184152659|ref|YP_001841000.1| recombination protein F [Lactobacillus reuteri JCM 1112] gi|227364310|ref|ZP_03848403.1| recombination protein F [Lactobacillus reuteri MM2-3] gi|325683509|ref|ZP_08163025.1| recombination protein F [Lactobacillus reuteri MM4-1A] gi|166918724|sp|A5VHF6|RECF_LACRD RecName: Full=DNA replication and repair protein recF gi|226737809|sp|B2G4Y8|RECF_LACRJ RecName: Full=DNA replication and repair protein recF gi|148530281|gb|ABQ82280.1| DNA replication and repair protein RecF [Lactobacillus reuteri DSM 20016] gi|183224003|dbj|BAG24520.1| DNA replication and repair protein RecF [Lactobacillus reuteri JCM 1112] gi|227070623|gb|EEI08953.1| recombination protein F [Lactobacillus reuteri MM2-3] gi|324977859|gb|EGC14810.1| recombination protein F [Lactobacillus reuteri MM4-1A] Length = 374 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + ++ + F + ++ G N GK+++ EAI L + R + + Sbjct: 3 LTELHLHHFRNYQDLT-VHFNPGVNVLIGHNAQGKTNMLEAIYVLSLTKSHRTSNDHELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWQEKS 67 >gi|315428019|dbj|BAJ49607.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 539 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDS 86 + ++ + +F E +I L ++ G NG GKSS+ AI YT+R + Sbjct: 12 YIKEVILENFMSH-EYSRIPLRRGLNVIVGPNGAGKSSILLAISVALGQTYTERGQRLAD 70 Query: 87 IKKRSIKTPM 96 + +R ++ Sbjct: 71 LIRRGNESAR 80 >gi|195402597|ref|XP_002059891.1| GJ14987 [Drosophila virilis] gi|194140757|gb|EDW57228.1| GJ14987 [Drosophila virilis] Length = 1312 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 20/96 (20%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY------T 78 + + I R F ++Q I F+ +T++ GQNG GK+++ E +++ G + Sbjct: 4 IEKLSIQGVRSFGANAEDVQSITFSSPITLILGQNGCGKTTIIECLKYALTGECPPGSDS 63 Query: 79 QRRKHGD----------SIKKRSIKTPMPMCMAVPR 104 + D + K ++ MC+++ R Sbjct: 64 GKSFVHDPKIFGKKESLAQVKLQVRDRRDMCLSICR 99 >gi|84385714|ref|ZP_00988745.1| hypothetical protein V12B01_26309 [Vibrio splendidus 12B01] gi|84379694|gb|EAP96546.1| hypothetical protein V12B01_26309 [Vibrio splendidus 12B01] Length = 842 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 S Y K I K+ I++++FRG+T+ I + LT++ G+NG GK+S+ EAI Sbjct: 413 SLYVEKTI-KVNQIKLTNFRGYTDFT-IPIHESLTVLVGENGAGKTSILEAI 462 >gi|296132527|ref|YP_003639774.1| SMC domain protein [Thermincola sp. JR] gi|296031105|gb|ADG81873.1| SMC domain protein [Thermincola potens JR] Length = 980 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I + + + + + Q+I F + + ++G NG GKS++ EAI + + Sbjct: 1 MKIRKIRLQNIKSYVD-QEITFNEGVNFISGINGAGKSTIIEAIGFALF 48 >gi|291566231|dbj|BAI88503.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 438 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + +++FRGF E + EF + ++ G NG GKS++ + I + Sbjct: 1 MQINQLTLTNFRGF-EQAEFEFKSGMNLLVGINGVGKSTILDVIRIML 47 >gi|284047391|ref|YP_003397730.1| DNA replication and repair protein RecF [Acidaminococcus fermentans DSM 20731] gi|283951612|gb|ADB46415.1| DNA replication and repair protein RecF [Acidaminococcus fermentans DSM 20731] Length = 378 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + HFR + E I ++TI G N GK++L E I G++ R +H + Sbjct: 1 MRLENLRLLHFRNY-EQVSIPLGHNITIFYGDNAQGKTNLLEGIHTAARGFSFRTRHEEE 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|256378727|ref|YP_003102387.1| ATP-dependent endonuclease of the OLD family- like protein [Actinosynnema mirum DSM 43827] gi|255923030|gb|ACU38541.1| ATP-dependent endonuclease of the OLD family- like protein [Actinosynnema mirum DSM 43827] Length = 648 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ + I +FR + ++ F D +T + G NG GKS++ A++W F G Sbjct: 1 MRISKVRIKNFRCLAD-VEVRF-DQVTTLIGPNGVGKSTVLRALDWFFNGT 49 >gi|218132608|ref|ZP_03461412.1| hypothetical protein BACPEC_00467 [Bacteroides pectinophilus ATCC 43243] gi|217992334|gb|EEC58337.1| hypothetical protein BACPEC_00467 [Bacteroides pectinophilus ATCC 43243] Length = 1037 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 34 ISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +S F + + IEF + L ++ G G GK+++ +AI + Y T ++ + Sbjct: 1 MSAFGSYADRVTIEFDRGREGLFLITGDTGSGKTTIFDAIMYALYDETSGGNRSGNMMRS 60 Query: 91 SI 92 Sbjct: 61 QY 62 >gi|195108425|ref|XP_001998793.1| GI24164 [Drosophila mojavensis] gi|193915387|gb|EDW14254.1| GI24164 [Drosophila mojavensis] Length = 1240 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LQFIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|115565211|emb|CAL49464.1| chondroitin sulfate proteoglycan 6 (bamacan) [Xenopus (Silurana) tropicalis] Length = 458 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|67984422|ref|XP_669517.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56483695|emb|CAI03191.1| hypothetical protein PB301085.00.0 [Plasmodium berghei] Length = 158 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|332706260|ref|ZP_08426328.1| DNA replication and repair protein RecF [Lyngbya majuscula 3L] gi|332354965|gb|EGJ34437.1| DNA replication and repair protein RecF [Lyngbya majuscula 3L] Length = 383 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + + FR + + + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKSLHLRQFRNYRDCL-VNFDAPKTILLGNNAQGKSNLLEAVELLSTLKSHRSVRD 57 >gi|307566081|ref|ZP_07628539.1| DNA sulfur modification protein DndD [Prevotella amnii CRIS 21A-A] gi|307345269|gb|EFN90648.1| DNA sulfur modification protein DndD [Prevotella amnii CRIS 21A-A] Length = 695 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 29 LLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + IE+ +FR + + KI+ ++ IV+G NGYGK++ ++ W YG + Sbjct: 3 IKSIELYNFRIYRGVNKIDLTPNGERNIIIVSGNNGYGKTTFLMSLVWCLYGKNMEKV-- 60 Query: 85 DSIKKRSIKTP 95 D + K+ I Sbjct: 61 DELYKKEIDEK 71 >gi|291547607|emb|CBL20715.1| Recombinational DNA repair ATPase (RecF pathway) [Ruminococcus sp. SR1/5] Length = 157 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I +++FR + E ++ F I+ G N GK+++ EA+ + + Sbjct: 1 MYIESIRLNNFRNY-ESLEMNFDQGTNILYGDNAQGKTNILEAVYLAGTSKSHKGSKDRE 59 Query: 87 IKK 89 + + Sbjct: 60 MIR 62 >gi|302423046|ref|XP_003009353.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261352499|gb|EEY14927.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 1154 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMTTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|212224573|ref|YP_002307809.1| chromosome segregation protein [Thermococcus onnurineus NA1] gi|212009530|gb|ACJ16912.1| DNA double-strand break repair ATPase [Thermococcus onnurineus NA1] Length = 884 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHG 84 K+ + I FR ++ K+ F + ++ GQNG GKSSL +A+ Y ++ + K Sbjct: 1 MKIEKLIIKDFRSH-KLTKVTFTSGINLIIGQNGSGKSSLLDALLIGLYWPSKPKDLKKD 59 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQL 109 D ++ T + + KYQ+ Sbjct: 60 DFLRIGGTTTEITVFFEKDGVKYQI 84 >gi|195400084|ref|XP_002058648.1| GJ14197 [Drosophila virilis] gi|194142208|gb|EDW58616.1| GJ14197 [Drosophila virilis] Length = 1240 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LQFIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|220934933|ref|YP_002513832.1| SMC domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996243|gb|ACL72845.1| SMC domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 880 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + IE+SHFR +IE D LTI+ G N GKS+L EA+ + Sbjct: 4 IKSIEVSHFRKLKGPVRIEGLEDGLTIIAGDNEEGKSTLLEAVRAALFE 52 >gi|163941362|ref|YP_001646246.1| hypothetical protein BcerKBAB4_3445 [Bacillus weihenstephanensis KBAB4] gi|163863559|gb|ABY44618.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4] Length = 628 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I++ +FR + I+ + + T + G+N GKS++ EA+E F + D Sbjct: 1 MKLTTIKLENFRSYHGEVVIDIS-NFTTLIGRNDAGKSTILEALEIFFNAEIVKPDPNDV 59 Query: 87 IKKRS 91 K Sbjct: 60 CKFSG 64 >gi|88854502|ref|ZP_01129169.1| recombination protein F [marine actinobacterium PHSC20C1] gi|88816310|gb|EAR26165.1| recombination protein F [marine actinobacterium PHSC20C1] Length = 387 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ FR + + +E + T++ G NG GK++L EA+ +L + R + Sbjct: 1 MLVTHVDLKDFRNYKGLT-LELSSGPTLIVGSNGQGKTNLVEALGFLSTLGSHRVSTDHA 59 Query: 87 IKKRSIK 93 + ++ Sbjct: 60 MVRQGTD 66 >gi|239933499|ref|ZP_04690452.1| exonuclease SbcC [Streptomyces ghanaensis ATCC 14672] gi|291441869|ref|ZP_06581259.1| SMC domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291344764|gb|EFE71720.1| SMC domain-containing protein [Streptomyces ghanaensis ATCC 14672] Length = 810 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +E+ F F E ++F + + G G GKS++ +AI + YG R Sbjct: 6 LEMDGFASFREPAAVDFREVDYFALVGPTGSGKSTVIDAITFALYGSVPR 55 >gi|163748618|ref|ZP_02155871.1| hypothetical protein KT99_18482 [Shewanella benthica KT99] gi|161331728|gb|EDQ02532.1| hypothetical protein KT99_18482 [Shewanella benthica KT99] Length = 534 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI----EWLFYGYTQRR 81 +L I++ +FR F+EI I+ D+ LT++ G NG GKS++ +AI WL T++ Sbjct: 62 LELTHIKLQNFRAFSEID-IKIPDNRLTVIIGNNGGGKSTILDAISHNMSWLVNRMTKKG 120 Query: 82 KHGDSIKKR 90 G+SI Sbjct: 121 GTGESIDDL 129 >gi|324500675|gb|ADY40310.1| Structural maintenance of chromosomes protein 3 [Ascaris suum] Length = 1202 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + IS FR + + + + + G+NG GKS+ AIE++ Sbjct: 1 MHIKQVRISGFRSYRDATISDLSPKHNVFVGRNGSGKSNFFFAIEFVL 48 >gi|224543178|ref|ZP_03683717.1| hypothetical protein CATMIT_02378 [Catenibacterium mitsuokai DSM 15897] gi|224523965|gb|EEF93070.1| hypothetical protein CATMIT_02378 [Catenibacterium mitsuokai DSM 15897] Length = 1051 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K + + + F + I+F++ +L ++ G G GK+++ +AI + YG + + Sbjct: 1 MKPIKLVMEAFGSYASKTIIDFSEPNQNLFLITGDTGAGKTTIFDAIVFALYGESSSTLN 60 Query: 84 G 84 Sbjct: 61 K 61 >gi|159480416|ref|XP_001698278.1| structural maintenance of chromosomes protein 3 [Chlamydomonas reinhardtii] gi|158282018|gb|EDP07771.1| structural maintenance of chromosomes protein 3 [Chlamydomonas reinhardtii] Length = 1121 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + + + F + +V G NG GKS+ AI ++ Sbjct: 1 VLIEGFKSYKDQTSTDEFDPKINVVVGANGSGKSNFFHAIRFVL 44 >gi|108803297|ref|YP_643234.1| SMC protein-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764540|gb|ABG03422.1| SMC protein-like protein [Rubrobacter xylanophilus DSM 9941] Length = 955 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHGDS 86 L + + +++ F + ++ + V G NG GK++L EAI W F+G T R DS Sbjct: 3 LKRLYLENYKQFRDPLELLPPEGAIGVVGANGAGKTTLFEAILWAFFGSRGTDARFANDS 62 Query: 87 I 87 I Sbjct: 63 I 63 >gi|331267332|ref|YP_004326962.1| recombination protein F [Streptococcus oralis Uo5] gi|326684004|emb|CBZ01622.1| recombination protein F [Streptococcus oralis Uo5] Length = 365 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-AKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LIHFDNEQLR 69 >gi|325959297|ref|YP_004290763.1| SMC domain-containing protein [Methanobacterium sp. AL-21] gi|325330729|gb|ADZ09791.1| SMC domain protein [Methanobacterium sp. AL-21] Length = 815 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L++EI++FRG ++ + ++ G NG GKS++ +A+++L G R Sbjct: 1 MKVLELEITNFRGIKNLKINPAGKNF-MIIGPNGSGKSAVVDAVDFLLTGQISR 53 >gi|294085123|ref|YP_003551883.1| RecF protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664698|gb|ADE39799.1| RecF protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 418 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ A + L + +++FR + E ++EF ++ G NG GK++L EAI L G Sbjct: 28 AHSASRPQLWLSGLLLNNFRNY-ETVRLEFGQAPVVLVGANGAGKTNLLEAISLLSPGKG 86 Query: 79 QRRKHGDSIKKRSIKTP 95 RR + + P Sbjct: 87 MRRAKTAHLARIGAAMP 103 >gi|262164232|ref|ZP_06031970.1| exonuclease SbcC [Vibrio mimicus VM223] gi|262026612|gb|EEY45279.1| exonuclease SbcC [Vibrio mimicus VM223] Length = 1013 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLTLQAFGPFAGREVIDFTELGDAPLFLINGPTGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|258625102|ref|ZP_05720020.1| ATPase involved in DNA repair [Vibrio mimicus VM603] gi|258582604|gb|EEW07435.1| ATPase involved in DNA repair [Vibrio mimicus VM603] Length = 1013 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLTLQAFGPFAGREVIDFTELGDAPLFLINGPTGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|268318289|ref|YP_003292008.1| DNA replication and repair protein RecF [Rhodothermus marinus DSM 4252] gi|262335823|gb|ACY49620.1| DNA replication and repair protein RecF [Rhodothermus marinus DSM 4252] Length = 387 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR E ++ FA + ++ G NG GK++L EAI +L + Sbjct: 1 MLLRSLRVRNFRAH-EDTRVTFAPRINLIGGPNGAGKTNLLEAIHYLCLSKSFLAAQDSY 59 Query: 87 IKKRS 91 + Sbjct: 60 ALREG 64 >gi|315612172|ref|ZP_07887087.1| recombination protein F [Streptococcus sanguinis ATCC 49296] gi|315315733|gb|EFU63770.1| recombination protein F [Streptococcus sanguinis ATCC 49296] Length = 365 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + E KI+F L + GQN GK+++ EAI +L + R + + Sbjct: 1 MWLQHLTIKTFRNYKE-AKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKN 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIHFDNEQ 67 >gi|312793323|ref|YP_004026246.1| SMC domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180463|gb|ADQ40633.1| SMC domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 857 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLFLRIENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|229149250|ref|ZP_04277489.1| hypothetical protein bcere0011_8140 [Bacillus cereus m1550] gi|228634222|gb|EEK90812.1| hypothetical protein bcere0011_8140 [Bacillus cereus m1550] Length = 702 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + I +++FR F + K +EF + I+ G+N GK+++ +AI +L + Sbjct: 1 MYMKSISLTNFRQFGTVNKGEPAITVEFNPNFNILVGENDSGKTAIIDAIRYLLGSIS 58 >gi|183983577|ref|YP_001851868.1| chromosome partition ATPase protein [Mycobacterium marinum M] gi|183176903|gb|ACC42013.1| chromosome partition ATPase protein [Mycobacterium marinum M] Length = 1002 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + I R F +I F++ L + G G GKSS+ EAI + Y T + G Sbjct: 1 MRPLRLRIKGLRSFRSEVEINFSELALVAIVGDTGAGKSSILEAITYALYNATTWEQRG 59 >gi|20090982|ref|NP_617057.1| hypothetical protein MA2139 [Methanosarcina acetivorans C2A] gi|19916068|gb|AAM05537.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 689 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I + +FR F + +EF + L + G+N GK+++ +A++ +F ++ Sbjct: 10 VLMYISKIRMQNFRCFCD-TSVEFYEGLNVFIGENNSGKTTVLKALQLIFDNSVSKKLSI 68 Query: 85 DSIKK--RSIKTPMPMCMAV 102 D K S P + + + Sbjct: 69 DDFYKGISSFDEPPQITITI 88 >gi|313227220|emb|CBY22367.1| unnamed protein product [Oikopleura dioica] Length = 1263 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +I +F+ + + I F T + G NG GKS++ +++ ++F GY ++ + Sbjct: 40 IKEIVNENFKSYAGTKVIGPFHKAFTSIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKV 98 >gi|269793362|ref|YP_003312817.1| DNA replication and repair protein RecF [Sanguibacter keddieii DSM 10542] gi|269095547|gb|ACZ19983.1| DNA replication and repair protein RecF [Sanguibacter keddieii DSM 10542] Length = 414 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR +T +E +T + G NG GK++L EA+ ++ + R + Sbjct: 1 MHVSHLSLLDFRSYT-QVDVELEPGVTTLVGPNGQGKTNLVEALGYVATLGSHRVSSDAA 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|154149264|ref|YP_001406217.1| hypothetical protein CHAB381_0630 [Campylobacter hominis ATCC BAA-381] gi|153805273|gb|ABS52280.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381] Length = 513 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ +++ +FRG+++ + F D LT++ G+N GKS++ EA+ Sbjct: 1 MKIKSMKVKNFRGYSDEIIVNFDD-LTVIVGKNDVGKSTILEAL 43 >gi|159116626|ref|XP_001708534.1| SMC4-like protein [Giardia lamblia ATCC 50803] gi|157436646|gb|EDO80860.1| SMC4-like protein [Giardia lamblia ATCC 50803] Length = 1435 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F+ + + F + + G NG GKS++ +++ ++F G+ R + Sbjct: 6 LTKLRLVNFKSYAGEHVLGPFKPSFSCILGANGSGKSNVIDSLLFVF-GWRARALRHSRL 64 Query: 88 KKR 90 Sbjct: 65 ADL 67 >gi|332665879|ref|YP_004448667.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334693|gb|AEE51794.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 701 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + ++E+ +FR + I ++ IV+G NG+GK++ A+ W YG + Sbjct: 1 MYIKELELYNFRQYKGNNTINLETEEDKNILIVSGMNGFGKTNFLIALVWCLYGSDTEKV 60 >gi|284992733|ref|YP_003411287.1| putative ATP-dependent dsDNA exonuclease [Geodermatophilus obscurus DSM 43160] gi|284065978|gb|ADB76916.1| putative ATP-dependent dsDNA exonuclease [Geodermatophilus obscurus DSM 43160] Length = 986 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 +L + I+ F F + ++ D L ++ G G GK++L +A+ + YG Sbjct: 1 MRLHSLSITAFGPFAGTETVDVDAVARDGLFLLWGPTGAGKTTLLDAVVYALYGTVPGAR 60 Query: 79 --QRRKHGD 85 ++R D Sbjct: 61 GEEKRLRSD 69 >gi|194447626|ref|YP_002048349.1| hypothetical protein SeHA_C4715 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194405930|gb|ACF66149.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 255 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + + +FR E Q+I+FA +T++ G N GK+++ A+ +L Sbjct: 1 MKLTKLVLENFRSVRERQEIDFA-SVTLLLGPNSAGKTTILIALFYL 46 >gi|325961454|ref|YP_004239360.1| DNA replication and repair protein RecF [Arthrobacter phenanthrenivorans Sphe3] gi|323467541|gb|ADX71226.1| DNA replication and repair protein RecF [Arthrobacter phenanthrenivorans Sphe3] Length = 403 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + + +T++ G NG GK++L EAI +L + R Sbjct: 1 MYLEHLSLTDFRSYA-QVDLALGPGVTVLVGYNGIGKTNLMEAIGYLATMSSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LLRFGTD 66 >gi|323143412|ref|ZP_08078097.1| putative DNA replication and repair protein RecF [Succinatimonas hippei YIT 12066] gi|322416817|gb|EFY07466.1| putative DNA replication and repair protein RecF [Succinatimonas hippei YIT 12066] Length = 359 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + IS FR E+ + A ++ G NG GKSS+ EA+ +L G + R + Sbjct: 1 MFLSRLVISDFRNL-EMLDFKPAPGFNVIYGPNGSGKSSVLEAVSYLALGRSFRGYNYQY 59 Query: 87 IKKRSIKT 94 + K K+ Sbjct: 60 LIKNGRKS 67 >gi|297543798|ref|YP_003676100.1| SMC domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841573|gb|ADH60089.1| SMC domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 1177 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 7/88 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + IS F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLRISGLNSFAEEQVIDFERLTERGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 H---GDSIKKRSIKTPMPMCMAVPRCKY 107 + S+ + + R +Y Sbjct: 61 REFINTNSISTSVSYEFEIGIGAERKRY 88 >gi|218675373|ref|ZP_03525042.1| ATPase [Rhizobium etli GR56] Length = 446 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-----WLFY--GYTQ 79 KL +++I +FRGF E +V G+N GK++L EA WL G Sbjct: 1 MKLNELDIKNFRGFEERG-FRLHPQFNLVIGENASGKTTLLEAAAIAVSSWLLGFQGTAS 59 Query: 80 RRKHGDSIK 88 R ++ Sbjct: 60 RNIRTRDVR 68 >gi|194014688|ref|ZP_03053305.1| DNA repair exonuclease subunit C [Bacillus pumilus ATCC 7061] gi|194013714|gb|EDW23279.1| DNA repair exonuclease subunit C [Bacillus pumilus ATCC 7061] Length = 1132 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F+ + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPITLTIKGLHSFREEQIIDFSSLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAL 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|194754908|ref|XP_001959734.1| GF11892 [Drosophila ananassae] gi|190621032|gb|EDV36556.1| GF11892 [Drosophila ananassae] Length = 1308 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I R F ++Q I F+ +T++ G+NG GK+++ E +++ G + Sbjct: 4 IEKLSIQGVRSFGSNAEDMQSITFSSPVTLILGENGCGKTTIIECLKYALTGES 57 >gi|330470836|ref|YP_004408579.1| recombination protein F [Verrucosispora maris AB-18-032] gi|328813807|gb|AEB47979.1| recombination protein F [Verrucosispora maris AB-18-032] Length = 377 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + E ++ I+ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRRLELVDFRSY-ERVGVDLEPGPNILIGANGVGKTNLVEALGYVATLDSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRC 105 + + AV RC Sbjct: 60 LVRMGATA------AVIRC 72 >gi|320035464|gb|EFW17405.1| nuclear condensin complex subunit Smc4 [Coccidioides posadasii str. Silveira] Length = 1569 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 364 MVITHLVLTNFKSYAGRQVVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 422 >gi|303315385|ref|XP_003067700.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107370|gb|EER25555.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1569 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 364 MVITHLVLTNFKSYAGRQVVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 422 >gi|166363552|ref|YP_001655825.1| exonuclease SbcC-like protein [Microcystis aeruginosa NIES-843] gi|166085925|dbj|BAG00633.1| exonuclease SbcC homolog [Microcystis aeruginosa NIES-843] Length = 1007 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 4 LQLTLKNFLSYREAV-LDFRGLHTACICGANGAGKSSLLEAITWAIWGESRTSIADDVI 61 >gi|148927274|ref|ZP_01810844.1| DNA replication and repair protein RecF [candidate division TM7 genomosp. GTL1] gi|147887333|gb|EDK72787.1| DNA replication and repair protein RecF [candidate division TM7 genomosp. GTL1] Length = 351 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + FR + + + + +TI++G NG GK++L EA+ L G + R Sbjct: 4 SLRLQQFRSYKDK-SVTLSPAVTIISGPNGSGKTNLLEALYVLARGTSFR 52 >gi|148927269|ref|ZP_01810839.1| DNA replication and repair protein RecF [candidate division TM7 genomosp. GTL1] gi|147887328|gb|EDK72782.1| DNA replication and repair protein RecF [candidate division TM7 genomosp. GTL1] Length = 351 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + FR + + + + +TI++G NG GK++L EA+ L G + R Sbjct: 4 SLRLQQFRSYKDK-SVTLSPAVTIISGPNGSGKTNLLEALYVLARGTSFR 52 >gi|119190941|ref|XP_001246077.1| hypothetical protein CIMG_05518 [Coccidioides immitis RS] Length = 1413 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 208 MVITHLVLTNFKSYAGRQVVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 266 >gi|195573343|ref|XP_002104653.1| GD21061 [Drosophila simulans] gi|194200580|gb|EDX14156.1| GD21061 [Drosophila simulans] Length = 429 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 86 >gi|156089429|ref|XP_001612121.1| hypothetical protein [Babesia bovis T2Bo] gi|154799375|gb|EDO08553.1| conserved hypothetical protein [Babesia bovis] Length = 1121 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++I R F+ Q IEF LT++ G NG GK+++ E ++ G Sbjct: 4 LKSLQIQGIRCFSPNNAQSIEFEKPLTLIVGPNGAGKTTIMECLKMGLCG 53 >gi|300866185|ref|ZP_07110902.1| Exonuclease SbcC [Oscillatoria sp. PCC 6506] gi|300335819|emb|CBN56062.1| Exonuclease SbcC [Oscillatoria sp. PCC 6506] Length = 1044 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F + + ++F H + G NG GK+SL EAI W +G + D I Sbjct: 5 QLTLKNFLSYRDAT-LDFRGLHTACICGPNGAGKTSLLEAIAWAIWGNCRTASEDDII 61 >gi|317506151|ref|ZP_07963974.1| hypothetical protein HMPREF9336_00343 [Segniliparus rugosus ATCC BAA-974] gi|316255573|gb|EFV14820.1| hypothetical protein HMPREF9336_00343 [Segniliparus rugosus ATCC BAA-974] Length = 836 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L I++ H+RG + + + AD +T+V G N GKSS+ EA++ LF + Sbjct: 1 MRLHRIKLEHYRGVRDREVVFAADGVTVVEGPNESGKSSMIEALDLLFEAKDASKTR 57 >gi|304309655|ref|YP_003809253.1| Recombinational DNA repair ATPase [gamma proteobacterium HdN1] gi|301795388|emb|CBL43586.1| Recombinational DNA repair ATPase [gamma proteobacterium HdN1] Length = 393 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +EIS FR +I A L V G NG GK+SL EA+ L G + R + S Sbjct: 1 MAIVKLEISDFRNLKA-VEIAPAQGLNWVVGPNGSGKTSLLEALHLLATGKSFRANNLRS 59 Query: 87 IKKRSIKTPMPMCM 100 + KT +C+ Sbjct: 60 CIRGGAKTCRVVCL 73 >gi|256374882|ref|YP_003098542.1| DNA repair exonuclease, SbcC [Actinosynnema mirum DSM 43827] gi|255919185|gb|ACU34696.1| DNA repair exonuclease, SbcC [Actinosynnema mirum DSM 43827] Length = 962 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 10/70 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 +L +E+S F + + ++F AD L +++G G GK++L +A+ + +G Sbjct: 1 MRLHRLELSAFGPYPGREVVDFDALGADGLFLLHGDTGAGKTTLLDAVAFALFGQVPGAR 60 Query: 79 --QRRKHGDS 86 +R D Sbjct: 61 GEVKRLRCDY 70 >gi|332535595|ref|ZP_08411363.1| type I restriction-modification system, specificity subunit S [Pseudoalteromonas haloplanktis ANT/505] gi|332034979|gb|EGI71500.1| type I restriction-modification system, specificity subunit S [Pseudoalteromonas haloplanktis ANT/505] Length = 877 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ ++ + ++R F E K+ F+D ++T++ G NG GKSS+ EA G + Sbjct: 429 LKIKNLTLKNYRAF-ESFKMNFSDSNVTVIIGNNGVGKSSILEATALSLSGLIAK 482 >gi|310792250|gb|EFQ27777.1| RecF/RecN/SMC N terminal domain-containing protein [Glomerella graminicola M1.001] Length = 1179 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMTTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|238915980|ref|YP_002929497.1| DNA replication and repair protein RecF [Eubacterium eligens ATCC 27750] gi|259563364|sp|C4Z176|RECF_EUBE2 RecName: Full=DNA replication and repair protein recF gi|238871340|gb|ACR71050.1| DNA replication and repair protein RecF [Eubacterium eligens ATCC 27750] Length = 363 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ FR + E + F +H+ I+ G N GK+++ E+I + R I Sbjct: 3 VESVELKDFRNY-EFLDMNFNEHVNIIYGDNAQGKTNILESIYMCSTSKSHRGSKDREIV 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGED 66 >gi|195119820|ref|XP_002004427.1| GI19621 [Drosophila mojavensis] gi|193909495|gb|EDW08362.1| GI19621 [Drosophila mojavensis] Length = 1312 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I F+ +T++ GQNG GK+++ E +++ G Sbjct: 4 IEKLSIQGVRSFGVNAEDMQSITFSSPITLILGQNGCGKTTIIECLKYALTG 55 >gi|154273336|ref|XP_001537520.1| hypothetical protein HCAG_07829 [Ajellomyces capsulatus NAm1] gi|150416032|gb|EDN11376.1| hypothetical protein HCAG_07829 [Ajellomyces capsulatus NAm1] Length = 1179 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAARTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|113970784|ref|YP_734577.1| SMC domain-containing protein [Shewanella sp. MR-4] gi|113885468|gb|ABI39520.1| SMC domain protein [Shewanella sp. MR-4] Length = 1018 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F F Q I+F + L ++NG G GK++L + I + YG T + Sbjct: 1 MKPLSLSMSAFGPFASTQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|325067691|ref|ZP_08126364.1| putative exonuclease [Actinomyces oris K20] Length = 328 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + ++ + + I+F A ++ G G GK+++ +AI + YG Sbjct: 1 MRIHSLTMTGIGPYAGREHIDFDAVGASGRFLLTGPTGSGKTTIIDAIVFALYGDVADSA 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DSSKERIRS 69 >gi|326772029|ref|ZP_08231314.1| ATP-dependent dsDNA exonuclease [Actinomyces viscosus C505] gi|326638162|gb|EGE39063.1| ATP-dependent dsDNA exonuclease [Actinomyces viscosus C505] Length = 725 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + ++ + + I+F A ++ G G GK+++ +AI + YG Sbjct: 1 MRIHSLTMTGIGPYAGREHIDFDAVGASGRFLLTGPTGSGKTTIIDAIVFALYGDVADSA 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DSSKERIRS 69 >gi|145515950|ref|XP_001443869.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411269|emb|CAK76472.1| unnamed protein product [Paramecium tetraurelia] Length = 1179 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +I I F+ + + I + G NG GKS++ +AI + Sbjct: 1 MWIKEIIIEGFKSYAQRTVITNLDPEFNAITGLNGSGKSNILDAILFCLG 50 >gi|21228296|ref|NP_634218.1| chromosome segregation protein [Methanosarcina mazei Go1] gi|49036449|sp|Q8PUY4|RAD50_METMA RecName: Full=DNA double-strand break repair rad50 ATPase gi|20906757|gb|AAM31890.1| DNA repair protein RAD50 [Methanosarcina mazei Go1] Length = 1070 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL ++ I + R + + F D +T+++G NG GKSSL EA +G Sbjct: 1 MKLKNLYIENIRSY-KKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGS 50 >gi|312869203|ref|ZP_07729375.1| DNA replication and repair protein RecF [Lactobacillus oris PB013-T2-3] gi|311095224|gb|EFQ53496.1| DNA replication and repair protein RecF [Lactobacillus oris PB013-T2-3] Length = 373 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + E Q + FA + ++ G N GK+++ EAI L + R + + Sbjct: 3 LSELHLHHFRNY-EDQTVHFAPGVNVLIGHNAQGKTNMLEAIYALSLTRSHRTNNDRELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWQEKS 67 >gi|229513308|ref|ZP_04402773.1| exonuclease SbcC [Vibrio cholerae TMA 21] gi|229349718|gb|EEO14673.1| exonuclease SbcC [Vibrio cholerae TMA 21] Length = 1013 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLMLQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|270307914|ref|YP_003329972.1| DNA repair ATPase [Dehalococcoides sp. VS] gi|270153806|gb|ACZ61644.1| ATPase involved in DNA repair [Dehalococcoides sp. VS] Length = 859 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F + EI F H + GQNG GKS+L +AI W +G ++ + D + Sbjct: 5 KLKIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVVS 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 +T + + + YQ+ Sbjct: 65 LNEQETEVSLDFEISGELYQV 85 >gi|326692338|ref|ZP_08229343.1| DNA replication and repair protein RecF [Leuconostoc argentinum KCTC 3773] Length = 375 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + ++++R + ++ ++F+ + + G+N GK++L E+I L + R Sbjct: 1 MELTSLTLTNYRNYADLT-LDFSAGVNVFLGENAQGKTNLLESIYVLALARSHRTSSDKD 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIRWQANS 67 >gi|254579491|ref|XP_002495731.1| ZYRO0C01716p [Zygosaccharomyces rouxii] gi|238938622|emb|CAR26798.1| ZYRO0C01716p [Zygosaccharomyces rouxii] Length = 1413 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 AR + + + F+ + Q + F + V G NG GKS++ +++ ++F G+ Sbjct: 138 ARHTRLCIDQLILQDFKSYAGRQVVGPFNTSFSAVVGPNGSGKSNVIDSMLFVF-GFRAN 196 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 + D + K+ ++P C ++ Sbjct: 197 KMRQDRLSDLIHKSEE--YPSLPSCSVEV 223 >gi|227500983|ref|ZP_03931032.1| possible recombination protein F [Anaerococcus tetradius ATCC 35098] gi|227216756|gb|EEI82154.1| possible recombination protein F [Anaerococcus tetradius ATCC 35098] Length = 359 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++++FR + + +EF I G N GK++L E++ +L + ++ Sbjct: 1 MWIKDLKLNNFRNYF-YESVEFNKDTNIFIGDNAQGKTNLLESVYYLANARSFKKIRDKD 59 Query: 87 IKKRSIKT 94 I + S Sbjct: 60 IVRFSQSQ 67 >gi|195445194|ref|XP_002070216.1| GK11152 [Drosophila willistoni] gi|194166301|gb|EDW81202.1| GK11152 [Drosophila willistoni] Length = 1237 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----QRRKHG 84 L IE+ +F+ + + V G NG GKS+ +AI ++ T +R + Sbjct: 26 LQFIEMENFKSYRGHIIVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLND 85 >gi|261250984|ref|ZP_05943558.1| exonuclease SbcC [Vibrio orientalis CIP 102891] gi|260937857|gb|EEX93845.1| exonuclease SbcC [Vibrio orientalis CIP 102891] Length = 1014 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F + ++++F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPLKLTLQAFGPFAKTEQVDFTQLGSNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSI 92 + Sbjct: 61 RQGVQMRCDQ 70 >gi|310657320|ref|YP_003935041.1| DNA replication and repair protein recf [Clostridium sticklandii DSM 519] gi|308824098|emb|CBH20136.1| DNA replication and repair protein recF [Clostridium sticklandii] Length = 361 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I +S+FR ++ + F+++L ++ G+NG GK++L EAI L G + R Sbjct: 1 MLINNITLSNFRNYS-KAEANFSENLNLIIGKNGQGKTNLIEAIYMLSLGRSFRTNKDKE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|222478619|ref|YP_002564856.1| SMC domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222451521|gb|ACM55786.1| SMC domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 902 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 + +S+F+ + + + + +T+++G NG GKSSL EA + YG GD Sbjct: 1 MNFDRVRLSNFKPYGD-ADLRLTEGVTVIHGLNGSGKSSLLEACFFALYGSKALDGTLGD 59 Query: 86 SIKKRSIKTPMPM 98 I +T + + Sbjct: 60 VITNGEEETEVDL 72 >gi|153801457|ref|ZP_01956043.1| exonuclease SbcC, putative [Vibrio cholerae MZO-3] gi|124123032|gb|EAY41775.1| exonuclease SbcC, putative [Vibrio cholerae MZO-3] Length = 1013 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|332672426|ref|YP_004421670.1| gp46 recombination endonuclease [Campylobacter phage NCTC12673] gi|327493603|gb|AEA86462.1| gp46 recombination endonuclease [Campylobacter phage NCTC12673] Length = 548 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Query: 27 FKLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-- 83 I + +F + + K EF + + +V G+NG GKSSL A+ + +G T K Sbjct: 4 INFKSITLQNFMKYGNKKTKFEFTNGIHLVTGKNGAGKSSLFLALHYCLFGKTYNGKTIG 63 Query: 84 --GDSIKKRSIKTPMPMCM 100 ++I K+ + + M + Sbjct: 64 SLVNNINKKGMYVEVEMNI 82 >gi|21668308|emb|CAC84466.1| putative myosine-like protein [Spodoptera frugiperda ascovirus 1a] Length = 686 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRRKHGDSIK 88 + + +FR F ++ F+D +T+++ +G GK+++ +AIE++ + + G+ Sbjct: 2 RLTLENFRIFGGRTELTFSDTGVTLLSAPSGTGKTTVLDAIEFVLFNAPSSTTVAGNYEN 61 Query: 89 KRSIKTPMPMCMAVPRCK 106 R+ T + + + R K Sbjct: 62 PRTRTTAVTLEIGNVRVK 79 >gi|19112184|ref|NP_595392.1| condensin subunit Cut3 [Schizosaccharomyces pombe 972h-] gi|13432112|sp|P41004|SMC4_SCHPO RecName: Full=Structural maintenance of chromosomes protein 4; AltName: Full=Cell untimely torn protein 3; AltName: Full=Chromosome segregation protein cut3 gi|5441485|emb|CAB46756.1| condensin subunit Cut3 [Schizosaccharomyces pombe] Length = 1324 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 24 KLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+ ++ +++F+ + Q + F + + G NG GKS++ +A+ ++F Sbjct: 123 RLVVY--ELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFG 173 >gi|300984863|ref|ZP_07177151.1| RecF/RecN/SMC protein [Escherichia coli MS 45-1] gi|300408292|gb|EFJ91830.1| RecF/RecN/SMC protein [Escherichia coli MS 45-1] gi|315292954|gb|EFU52306.1| RecF/RecN/SMC protein [Escherichia coli MS 153-1] Length = 465 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +A+ + Sbjct: 1 MRIDKLSLLNFRCFKQLD-ITFDEHITILVAPNGAGKTTVLDAVRLALF 48 >gi|189346970|ref|YP_001943499.1| SMC domain protein [Chlorobium limicola DSM 245] gi|189341117|gb|ACD90520.1| SMC domain protein [Chlorobium limicola DSM 245] Length = 423 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR----R 81 + K+ + + +FRG E + F LT++ NG GK+++ +A+ L T R Sbjct: 1 MMKIRTLRLINFRGI-EELSLPFESGLTVIAAVNGGGKTTVIDALAMLLSWLTARTRRDS 59 Query: 82 KHGDSIKKRSIK 93 G IK IK Sbjct: 60 GKGRYIKDVEIK 71 >gi|38637832|ref|NP_942806.1| hypothetical protein PHG168 [Ralstonia eutropha H16] gi|32527170|gb|AAP85920.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 656 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + I+ FR F I F+ LT + G N GK+++ +A+ LF +R Sbjct: 1 MHIESVTIAGFRCFGPNPTAIPFSQGLTAIVGPNASGKTAVLQALMRLFGVTRAQR 56 >gi|115298605|ref|YP_762457.1| 78.7 kDa SbcC subunit C [Spodoptera frugiperda ascovirus 1a] gi|21668310|emb|CAC84459.1| hypothetical protein [Spodoptera frugiperda ascovirus 1a] gi|114416872|emb|CAL44703.1| 78.7 kDa SbcC subunit C [Spodoptera frugiperda ascovirus 1a] Length = 690 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 31 DIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRRKHGDSIK 88 + + +FR F ++ F+D +T+++ +G GK+++ +AIE++ + + G+ Sbjct: 2 RLTLENFRIFGGRTELTFSDTGVTLLSAPSGTGKTTVLDAIEFVLFNAPSSTTVAGNYEN 61 Query: 89 KRSIKTPMPMCMAVPRCK 106 R+ T + + + R K Sbjct: 62 PRTRTTAVTLEIGNVRVK 79 >gi|191165831|ref|ZP_03027669.1| ATP binding protein [Escherichia coli B7A] gi|227883873|ref|ZP_04001678.1| ATP binding protein [Escherichia coli 83972] gi|190904155|gb|EDV63866.1| ATP binding protein [Escherichia coli B7A] gi|227839151|gb|EEJ49617.1| ATP binding protein [Escherichia coli 83972] gi|307555798|gb|ADN48573.1| ATP binding protein [Escherichia coli ABU 83972] Length = 465 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +A+ + Sbjct: 1 MRIDKLSLLNFRCFKQLD-ITFDEHITILVAPNGAGKTTVLDAVRLALF 48 >gi|116671119|ref|YP_832052.1| SMC domain-containing protein [Arthrobacter sp. FB24] gi|116611228|gb|ABK03952.1| SMC domain protein [Arthrobacter sp. FB24] Length = 1023 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 ++ +EIS F F + I+F L ++NG G GK+S+ +AI + YG Sbjct: 1 MRIHRLEISAFGPFAGTEHIDFDRLSAHGLFLLNGATGAGKTSVLDAICFALYGSVPGAR 60 Query: 77 YTQRRKHGD 85 +R D Sbjct: 61 QEGKRLRSD 69 >gi|332712268|ref|ZP_08432196.1| hypothetical protein LYNGBM3L_72650 [Lyngbya majuscula 3L] gi|332349074|gb|EGJ28686.1| hypothetical protein LYNGBM3L_72650 [Lyngbya majuscula 3L] Length = 688 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKI----EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I++ +FR F + + TI++G NG GK+++ A W+ Y Sbjct: 1 MKLLSIQLFNFRQFYGKTPVIVLASGEQNTTIIHGNNGAGKTTILNAFSWVLYE 54 >gi|302559663|ref|ZP_07312005.1| RecF protein [Streptomyces griseoflavus Tu4000] gi|302477281|gb|EFL40374.1| RecF protein [Streptomyces griseoflavus Tu4000] Length = 373 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYP-RVEVPLGPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|258513370|ref|YP_003189592.1| DNA replication and repair protein RecF [Desulfotomaculum acetoxidans DSM 771] gi|257777075|gb|ACV60969.1| DNA replication and repair protein RecF [Desulfotomaculum acetoxidans DSM 771] Length = 376 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ I++FR + + I+ ++L I G N GK+++ EAI +L G + R H Sbjct: 1 MRIKELFINNFRNYKSLH-IKPKENLNIFIGDNAQGKTNILEAICFLLQGRSFRTSHEKE 59 Query: 87 IKKRSIKTPM 96 I + Sbjct: 60 IINFDSEQSK 69 >gi|222153952|ref|YP_002563129.1| recombination protein F [Streptococcus uberis 0140J] gi|254790492|sp|B9DWE6|RECF_STRU0 RecName: Full=DNA replication and repair protein recF gi|222114765|emb|CAR43930.1| DNA replication and repair protein RecF [Streptococcus uberis 0140J] Length = 364 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +FR + + EF+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELQLRNFRNYGTVDT-EFSPGLNVFIGNNAQGKTNFLEAIYFLALTRSHRTRTDKE 59 Query: 87 IKKRS 91 + + S Sbjct: 60 LIQFS 64 >gi|117921052|ref|YP_870244.1| exonuclease SbcC [Shewanella sp. ANA-3] gi|117613384|gb|ABK48838.1| exonuclease SbcC, putative [Shewanella sp. ANA-3] Length = 1018 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F F Q I+F + L ++NG G GK++L + I + YG T + Sbjct: 1 MKPLTLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|312378100|gb|EFR24763.1| hypothetical protein AND_10429 [Anopheles darlingi] Length = 763 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I F+ + ++ F + G NG GKS++ ++I ++ Sbjct: 1 MYIKSIIIDGFKSYRYRTEVVGFDPEFNAITGLNGTGKSNILDSICFVLGISNLVHVRAT 60 Query: 86 SIKKRSI 92 S++ Sbjct: 61 SLQDLVY 67 >gi|307207352|gb|EFN85102.1| Structural maintenance of chromosomes protein 4 [Harpegnathos saltator] Length = 1378 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F H + + G NG GKS++ +++ ++F GY + +I Sbjct: 61 ISKIVNKNFKSYAASQMVGPFHKHFSAIVGPNGSGKSNVIDSMLFVF-GYRASKIRSKNI 119 >gi|303389895|ref|XP_003073179.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC 50506] gi|303302324|gb|ADM11819.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC 50506] Length = 1240 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R F E +EF LT++ G NG GK+++ E+++++ G G Sbjct: 4 LKKLMIRGIRSFSHREGSILEFYSPLTLIVGPNGTGKTTIIESLKYISTGSLPPNSRG 61 >gi|304314688|ref|YP_003849835.1| DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] gi|302588147|gb|ADL58522.1| predicted DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] Length = 837 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ + R + E +EF D +T+ G G GK++L AIE+ +G +R GDS+ Sbjct: 3 INSLELRNIRSY-ESGTVEFDDGVTLFEGDIGSGKTTLLLAIEFALFGLGDQR--GDSLL 59 Query: 89 KRSIKT 94 + + + Sbjct: 60 RATANS 65 >gi|281211498|gb|EFA85660.1| structural maintenance of chromosome protein [Polysphondylium pallidum PN500] Length = 1415 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + I+I F+ + ++ F+ ++ G+NG GKS+L AI ++ Sbjct: 1 MVFIKLIKIEGFKSYQHLDLASNTFSPGFNVITGRNGAGKSNLFSAIRFMLG 52 >gi|297531121|ref|YP_003672396.1| SMC domain protein [Geobacillus sp. C56-T3] gi|297254373|gb|ADI27819.1| SMC domain protein [Geobacillus sp. C56-T3] Length = 1114 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I+ F E Q I+F + + G G GKS++ +A+ +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|260461963|ref|ZP_05810208.1| DNA replication and repair protein RecF [Mesorhizobium opportunistum WSM2075] gi|259032210|gb|EEW33476.1| DNA replication and repair protein RecF [Mesorhizobium opportunistum WSM2075] Length = 377 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +++FR + + I+ A + +G NG GK++L EAI +L G RR Sbjct: 7 ISKLTLTNFRNYAALA-IDLAPGAVVFSGDNGAGKTNLLEAISFLTPGRGLRR 58 >gi|261418928|ref|YP_003252610.1| SMC domain protein [Geobacillus sp. Y412MC61] gi|319765745|ref|YP_004131246.1| SMC domain protein [Geobacillus sp. Y412MC52] gi|261375385|gb|ACX78128.1| SMC domain protein [Geobacillus sp. Y412MC61] gi|317110611|gb|ADU93103.1| SMC domain protein [Geobacillus sp. Y412MC52] Length = 1114 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I+ F E Q I+F + + G G GKS++ +A+ +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|218780066|ref|YP_002431384.1| SMC domain-containing protein [Desulfatibacillum alkenivorans AK-01] gi|218761450|gb|ACL03916.1| SMC domain-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 397 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 37 FRGFTEIQKIEFADHLTIV-NGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 F F ++K++F + + G NG GKS+L EAI + R +S+K+R ++ Sbjct: 8 FSSFKSMEKVDFQPGVVNIFVGANGSGKSNLLEAIG-VLSAAASGRVDDESLKRRGVRPG 66 Query: 96 MP 97 +P Sbjct: 67 LP 68 >gi|56419219|ref|YP_146537.1| DNA exonuclease [Geobacillus kaustophilus HTA426] gi|56379061|dbj|BAD74969.1| DNA exonuclease [Geobacillus kaustophilus HTA426] Length = 1114 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I+ F E Q I+F + + G G GKS++ +A+ +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|603501|dbj|BAA06454.1| cut3 protein [Schizosaccharomyces pombe] Length = 1324 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 24 KLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+ ++ +++F+ + Q + F + + G NG GKS++ +A+ ++F Sbjct: 123 RLVVY--ELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFG 173 >gi|300172306|ref|YP_003771471.1| DNA replication and repair protein RecF [Leuconostoc gasicomitatum LMG 18811] gi|299886684|emb|CBL90652.1| DNA replication and repair protein RecF [Leuconostoc gasicomitatum LMG 18811] Length = 375 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + ++R +T++ + F+D + + G+N GK++L E+I L + R Sbjct: 1 MELQSLRLVNYRNYTDLT-LNFSDGVNVFLGENAQGKTNLLESIYVLALARSHRTSSDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIRWQEK 66 >gi|257464155|ref|ZP_05628536.1| exonuclease SBCC [Fusobacterium sp. D12] gi|317061671|ref|ZP_07926156.1| exonuclease sbcc [Fusobacterium sp. D12] gi|313687347|gb|EFS24182.1| exonuclease sbcc [Fusobacterium sp. D12] Length = 921 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ +++ ++R +EI+ +EF+ + ++ G+NG GKSS+ EAI + R Sbjct: 1 MRIKKVQLKNYRSHSEIE-VEFSRGINLILGRNGRGKSSILEAIGLALFHIKDRTGK 56 >gi|145218825|ref|YP_001129534.1| DNA replication and repair protein RecF [Prosthecochloris vibrioformis DSM 265] gi|189039632|sp|A4SC23|RECF_PROVI RecName: Full=DNA replication and repair protein recF gi|145204989|gb|ABP36032.1| DNA replication and repair protein RecF [Chlorobium phaeovibrioides DSM 265] Length = 371 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L I+ +FR E D + ++ GQNG GK+S+ E I + Sbjct: 1 MRLRSIQFENFRNHRSF-SFEPEDGINLIYGQNGSGKTSILEGIHYC 46 >gi|74096355|ref|NP_001027867.1| SMC1 beta protein [Takifugu rubripes] gi|27805177|emb|CAD58847.2| SMC1 beta protein [Takifugu rubripes] Length = 1245 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI +F+ + + I + + G NG GKS+L +A+ + + Sbjct: 3 YLKQIEIENFKSWRGRRIIGPLMRFSCIIGTNGSGKSNLMDALSFAMGERS 53 >gi|289582094|ref|YP_003480560.1| SMC domain protein [Natrialba magadii ATCC 43099] gi|289531647|gb|ADD05998.1| SMC domain protein [Natrialba magadii ATCC 43099] Length = 924 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHG 84 ++ + + +F+ + + + +T+V+G NG GKS+L EA+ + YG R Sbjct: 1 MRVDRVRMLNFKCYGD-ADLTLERGVTVVHGVNGSGKSTLLEAVFFALYGSKALDDRTLD 59 Query: 85 DSIKKRSIKTPMPM 98 D I ++ + + Sbjct: 60 DVITTGENESEVEL 73 >gi|123473236|ref|XP_001319807.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121902599|gb|EAY07584.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1095 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I+ F+ + + + + L + G NG GKS+L +AIE++ + Sbjct: 1 MFIKRVTITGFKSYGKTTTFDDLSKGLNTIIGFNGSGKSNLYKAIEFVLLDEYAK 55 >gi|301060264|ref|ZP_07201131.1| RecF/RecN/SMC N-terminal domain protein [delta proteobacterium NaphS2] gi|300445776|gb|EFK09674.1| RecF/RecN/SMC N-terminal domain protein [delta proteobacterium NaphS2] Length = 402 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 8/80 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +E+ F+ I++I+F + ++ G NG GKS+L EAI + R +++ Sbjct: 2 IDKLEVRGFKS---IERIQFEPGRVNVLIGSNGSGKSNLLEAIG-VLSAAVHGRVDDEAL 57 Query: 88 KKRSIKTPMPMCMAVPRCKY 107 +R ++ +P A+ +C + Sbjct: 58 SRRGVRLGVP---ALFKCSF 74 >gi|47937470|gb|AAH72043.1| LOC432330 protein [Xenopus laevis] Length = 457 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|321313671|ref|YP_004205958.1| recombination protein F [Bacillus subtilis BSn5] gi|320019945|gb|ADV94931.1| recombination protein F [Bacillus subtilis BSn5] Length = 370 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + + +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-DHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|311032259|ref|ZP_07710349.1| recombination protein F [Bacillus sp. m3-13] Length = 373 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + H+R + + + F D + ++ G+N GK+++ E+I L + R + Sbjct: 1 MYIEELTLRHYRNYESLHAV-FEDGVNVILGENAQGKTNVMESIYVLAMAKSHRTSNDKD 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|308158766|gb|EFO61331.1| SMC4-like protein [Giardia lamblia P15] Length = 1465 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 13 LSKSLTSYYARKLIFK--LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEA 69 ++ + S +A + + + L + + +F+ + + F + + G NG GKS++ ++ Sbjct: 18 VAAEIKSAFAFQFMARIVLTKLRLVNFKSYAGEHVLGPFKSSFSCILGANGSGKSNVIDS 77 Query: 70 IEWLFYGYTQRRKHGDSIKKR 90 + ++F G+ R + Sbjct: 78 LLFVF-GWRARALRHSRLADL 97 >gi|296330040|ref|ZP_06872524.1| recombination protein F [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672702|ref|YP_003864373.1| recombination protein F [Bacillus subtilis subsp. spizizenii str. W23] gi|296153079|gb|EFG93944.1| recombination protein F [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410945|gb|ADM36063.1| recombination protein F [Bacillus subtilis subsp. spizizenii str. W23] Length = 370 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + + +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-DHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|16077072|ref|NP_387885.1| recombination protein F [Bacillus subtilis subsp. subtilis str. 168] gi|221307813|ref|ZP_03589660.1| recombination protein F [Bacillus subtilis subsp. subtilis str. 168] gi|221312135|ref|ZP_03593940.1| recombination protein F [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317068|ref|ZP_03598362.1| recombination protein F [Bacillus subtilis subsp. subtilis str. JH642] gi|221321331|ref|ZP_03602625.1| recombination protein F [Bacillus subtilis subsp. subtilis str. SMY] gi|132246|sp|P05651|RECF_BACSU RecName: Full=DNA replication and repair protein recF gi|467394|dbj|BAA05240.1| recombination protein [Bacillus subtilis] gi|2632271|emb|CAB11780.1| DNA repair and genetic recombination factor [Bacillus subtilis subsp. subtilis str. 168] Length = 370 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E++ +R + + +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELTSYRNY-DHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|302387274|ref|YP_003823096.1| SMC domain protein [Clostridium saccharolyticum WM1] gi|302197902|gb|ADL05473.1| SMC domain protein [Clostridium saccharolyticum WM1] Length = 1049 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + +S F + + ++F + ++ G G GK+++ + + + +G T +K Sbjct: 1 MKPLQLTMSAFGSYGGKETVDFEKIGHGIFLITGDTGAGKTTIFDGVTYALFGETSGQKR 60 Query: 84 GDSIKKRSIKTP 95 + + Sbjct: 61 EPFMMRSQYAAE 72 >gi|296417609|ref|XP_002838445.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634384|emb|CAZ82636.1| unnamed protein product [Tuber melanosporum] Length = 1482 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + +F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 279 ITHLVLMNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 335 >gi|281202074|gb|EFA76279.1| structural maintenance of chromosome protein [Polysphondylium pallidum PN500] Length = 1990 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ +++ + + G NG GKS++ ++I ++ ++ + Sbjct: 1 MFIEEIILDGFKSYSKRTTVGPLDPTFNAITGLNGSGKSNVLDSICFVLGITNLKQVRVN 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 DLQELVYK 68 >gi|170285139|gb|AAI61245.1| Unknown (protein for IMAGE:8931875) [Xenopus (Silurana) tropicalis] Length = 429 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|163915543|gb|AAI57408.1| Unknown (protein for IMAGE:6319183) [Xenopus laevis] Length = 360 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|158422636|ref|YP_001523928.1| recombination protein F [Azorhizobium caulinodans ORS 571] gi|158329525|dbj|BAF87010.1| DNA replication and repair protein [Azorhizobium caulinodans ORS 571] Length = 378 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + +S FR ++ +IE AD ++ G NG GK+++ EA+ L G RR D+ Sbjct: 7 RVRRLTLSRFRSYSA-AQIEVADGPVVLTGPNGAGKTNILEAVSLLSPGRGLRRAALDAF 65 Query: 88 KKRSIK 93 + Sbjct: 66 AQAGGD 71 >gi|306823994|ref|ZP_07457368.1| recombination protein F [Bifidobacterium dentium ATCC 27679] gi|309801974|ref|ZP_07696088.1| DNA replication and repair protein RecF [Bifidobacterium dentium JCVIHMP022] gi|304552992|gb|EFM40905.1| recombination protein F [Bifidobacterium dentium ATCC 27679] gi|308221422|gb|EFO77720.1| DNA replication and repair protein RecF [Bifidobacterium dentium JCVIHMP022] Length = 396 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + E ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MHISRLALDHYRSW-ERCVLDFEPGVNILQGANGLGKTNIVEAVEVLSTGSSHR 53 >gi|219853347|ref|YP_002470469.1| hypothetical protein CKR_0004 [Clostridium kluyveri NBRC 12016] gi|219567071|dbj|BAH05055.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 367 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++ +FR + E+ IEF ++ I G N GK+++ E++ + G + R Sbjct: 2 FLMYIKYLKLINFRNYKELD-IEFDKNINIFVGDNAQGKTNILESMYYCSIGKSPRTSKD 60 Query: 85 DSIK 88 + Sbjct: 61 KELI 64 >gi|104773261|ref|YP_618241.1| recombination protein F [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123378549|sp|Q1GC40|RECF_LACDA RecName: Full=DNA replication and repair protein recF gi|103422342|emb|CAI96850.1| DNA replication and repair protein RecF [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 381 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLSRFKQSGFRNLA-PLNLEFDPHVNVFLGENAQGKTNLLEAIYFLAISRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|116513232|ref|YP_812138.1| recombination protein F [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275997|sp|Q04CX2|RECF_LACDB RecName: Full=DNA replication and repair protein recF gi|116092547|gb|ABJ57700.1| DNA replication and repair protein RecF [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 381 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLSRFKQSGFRNLA-PLNLEFDPHVNVFLGENAQGKTNLLEAIYFLAISRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|320531088|ref|ZP_08032117.1| putative recombination protein F [Selenomonas artemidis F0399] gi|320136670|gb|EFW28623.1| putative recombination protein F [Selenomonas artemidis F0399] Length = 373 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +R + EI + F + I G N GK+++ EA+ + +G + R Sbjct: 1 MRITRLELHSYRNY-EILDLRFDPGVQIFLGANAQGKTNIIEALYYASFGRSHRTTSDAE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|312127803|ref|YP_003992677.1| SMC domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777822|gb|ADQ07308.1| SMC domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 857 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + I +F+ + E Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLFLRIENFKSYQETQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|157363277|ref|YP_001470044.1| SMC domain-containing protein [Thermotoga lettingae TMO] gi|157313881|gb|ABV32980.1| SMC domain protein [Thermotoga lettingae TMO] Length = 854 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-- 84 + L IEI +F G + + F D + ++ GQNG GKSSL EAI + YG R Sbjct: 4 LRPLTIEIENFLGI-KKCNLSFKDGVFLIIGQNGAGKSSLLEAIVFALYGTGVRYGKKSP 62 Query: 85 -DSIKKRSIKTPMPMCMAVPRCKYQL 109 + I+ RS + KY++ Sbjct: 63 SEYIRSRSSSCQIKFSFLRNGKKYEV 88 >gi|294651981|ref|ZP_06729265.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822137|gb|EFF81056.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 515 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L IEI +++ +I F LT++ G NG GK+++ +AI Sbjct: 58 LEKIEICNYKKIR-KLRINFEKELTVIIGDNGVGKTTILDAIR 99 >gi|304440613|ref|ZP_07400497.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370800|gb|EFM24422.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] Length = 761 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K IE+ F F ++F D + G+N GKS++ AI LFYG++ DS Sbjct: 1 MKFKKIELKSFGKFNNKT-LDFEDGFNFIYGENEAGKSTMESAIYGLFYGFS-----KDS 54 Query: 87 IKKRSIKTPMPMCMAVPRCKYQ 108 IK+R + R +Y Sbjct: 55 IKRRLYDDKFENYRPLLRGEYH 76 >gi|296192042|ref|XP_002743894.1| PREDICTED: structural maintenance of chromosomes protein 1B-like, partial [Callithrix jacchus] Length = 205 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLFVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKAA 54 >gi|253742161|gb|EES99008.1| SMC4-like protein [Giardia intestinalis ATCC 50581] Length = 1434 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F+ + + F + + + G NG GKS++ +++ ++F G+ R + Sbjct: 6 LTKLRLVNFKSYAGEHILGPFKPYFSCILGANGSGKSNVIDSLLFVF-GWRARALRHSRL 64 Query: 88 KKR 90 Sbjct: 65 ADL 67 >gi|134118852|ref|XP_771929.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254533|gb|EAL17282.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1329 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R F + Q IEF LT++ G NG GK+++ E +++ G G Sbjct: 4 LNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGDMPPNTKG 61 >gi|291482373|dbj|BAI83448.1| recombination protein F [Bacillus subtilis subsp. natto BEST195] Length = 370 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+S +R + + +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLELSSYRNY-DHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|220927511|ref|YP_002504420.1| SMC domain protein [Clostridium cellulolyticum H10] gi|219997839|gb|ACL74440.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 1049 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + IS F + Q I+F + + +++G G GK+++ +AI + +G Sbjct: 1 MKPLKLTISAFGPYAGKQFIDFTTLTEQIFVISGPTGAGKTTIFDAISFALFGEASGSSR 60 Query: 84 GDSIKKRSIKTP 95 + P Sbjct: 61 DRDSLRSDFAEP 72 >gi|307180241|gb|EFN68274.1| Structural maintenance of chromosomes protein 4 [Camponotus floridanus] Length = 1421 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + I F + + G NG GKS++ +++ ++F GY + I Sbjct: 56 ITKIINENFKSYAGTITIGPFHKSFSAIVGPNGSGKSNVIDSMLFVF-GYRASKIRSKKI 114 >gi|295398518|ref|ZP_06808552.1| possible exonuclease sbcC [Aerococcus viridans ATCC 11563] gi|294973241|gb|EFG49034.1| possible exonuclease sbcC [Aerococcus viridans ATCC 11563] Length = 1061 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +E+ F + E ++F D +L +++G G GK+++ +AI + YG T Sbjct: 1 MRPIKLELQAFGPYKEKTSLDFTDLGDQNLFLISGSTGAGKTTIFDAIVYALYGKTSGSS 60 Query: 83 HG 84 Sbjct: 61 RD 62 >gi|294141715|ref|YP_003557693.1| exonuclease SbcC [Shewanella violacea DSS12] gi|293328184|dbj|BAJ02915.1| exonuclease SbcC, putative [Shewanella violacea DSS12] Length = 1018 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q+ +FA + L ++NG G GK++L +AI + YG T + Sbjct: 1 MRPLKLIMSAFGPFASTQETDFAALGTNPLFLINGPTGAGKTTLLDAICFALYGKTTGDE 60 Query: 83 HGDSIKKR-----SIKTPMPMCMAVPRCKYQLK 110 S + S+ T + A+ +Y+++ Sbjct: 61 REGSQMRCDLALDSLLTEVTFSFALGEIQYRIR 93 >gi|253689247|ref|YP_003018437.1| hypothetical protein PC1_2874 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755825|gb|ACT13901.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 555 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL+ + +++FR F E Q I+FA +T++ G N GK+++ A+ +L Sbjct: 1 MKLIKLVLTNFRSFKETQVIQFAP-VTLLFGPNSVGKTTILMALFYL 46 >gi|154509489|ref|ZP_02045131.1| hypothetical protein ACTODO_02021 [Actinomyces odontolyticus ATCC 17982] gi|153799123|gb|EDN81543.1| hypothetical protein ACTODO_02021 [Actinomyces odontolyticus ATCC 17982] Length = 1024 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ + I F ++F+ L +++G G GKS+L +AI + YG R K Sbjct: 1 MKIRWLRIVGIGPFAGKHTVDFSAFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVARTK 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DASKDRLRS 69 >gi|77918666|ref|YP_356481.1| hypothetical protein Pcar_1061 [Pelobacter carbinolicus DSM 2380] gi|77544749|gb|ABA88311.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 712 Score = 50.0 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +E+ F F + +EFA + +V+G N GK++L +A+ + +G + Sbjct: 1 MMLRRLELQAFGRFRDEV-VEFAPGINLVSGPNESGKTTLVQALSAVLFGTPEAS 54 >gi|307177759|gb|EFN66756.1| Structural maintenance of chromosomes protein 3 [Camponotus floridanus] Length = 1202 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFKSYREQTIVEPFDPKHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|257440595|ref|ZP_05616350.1| exonuclease SbcC [Faecalibacterium prausnitzii A2-165] gi|257196918|gb|EEU95202.1| exonuclease SbcC [Faecalibacterium prausnitzii A2-165] Length = 818 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + + L +V G G GK++L +AI + Y ++ Sbjct: 1 MRPLKLTLSAFGPYAGTTTLPLEQLGRGGLYLVTGDTGAGKTTLFDAITYALYDHSSGGV 60 Query: 83 HGDSIKKRSIKTP 95 ++ + P Sbjct: 61 RDGAMLRSKYADP 73 >gi|229115357|ref|ZP_04244765.1| hypothetical protein bcere0017_16520 [Bacillus cereus Rock1-3] gi|228668077|gb|EEL23511.1| hypothetical protein bcere0017_16520 [Bacillus cereus Rock1-3] Length = 697 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 9/81 (11%) Query: 27 FKLLDIEISHFRGFTEIQ------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +I+I +FR F E + ++EF + ++ G+N GKS++ +AI + + Sbjct: 1 MFLKEIKIWNFRKFGEGEANSPGLQLEFHKNFNLLIGENDSGKSAIIDAIHFTLGTVSSE 60 Query: 81 RKH---GDSIKKRSIKTPMPM 98 GD + M Sbjct: 61 NLKITEGDFYVDEQGNSSSEM 81 >gi|254421230|ref|ZP_05034948.1| DNA replication and repair protein RecF [Synechococcus sp. PCC 7335] gi|196188719|gb|EDX83683.1| DNA replication and repair protein RecF [Synechococcus sp. PCC 7335] Length = 401 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + +FR ++ Q + F TI+ G N GKS+L EA+E L + R + K Sbjct: 1 MQNFRNYSS-QSVAFGAPKTILLGDNAQGKSNLLEAVELLATLKSHRTSRDRDLVGEGKK 59 Query: 94 T 94 T Sbjct: 60 T 60 >gi|167377212|ref|XP_001734316.1| DNA double-strand break repair Rad50 ATPase [Entamoeba dispar SAW760] gi|165904230|gb|EDR29530.1| DNA double-strand break repair Rad50 ATPase, putative [Entamoeba dispar SAW760] Length = 505 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 31 DIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +EI+ R + +IEF LT++ G NG GK+++ E++ + G + +G Sbjct: 6 KLEIAGIRSINPDKPVEIEFFKPLTLITGPNGAGKTTIIESVRYACTGTSPPNSNG 61 >gi|88860614|ref|ZP_01135251.1| gap repair protein with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] gi|88817209|gb|EAR27027.1| gap repair protein with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] Length = 364 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR ++ D + I+ G+NG GK+SL EAI +L +G + R + Sbjct: 1 MSLELVTVKNFRNLADL-SFSPVDGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTIKYKT 59 Query: 87 IKKRSIKT 94 I + T Sbjct: 60 IIQHHQDT 67 >gi|330835101|ref|YP_004409829.1| SMC domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567240|gb|AEB95345.1| SMC domain-containing protein [Metallosphaera cuprina Ar-4] Length = 859 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + F + ++ F + ++ GQNG GKSS+ +AI + + + R++ Sbjct: 1 MRIESVSLKDFLSH-DRTQVNFKGEINVIIGQNGAGKSSIIDAITFALF--KEARENVSE 57 Query: 87 IKKRSIKT 94 + ++ K+ Sbjct: 58 LIRKGSKS 65 >gi|323342251|ref|ZP_08082483.1| recombination protein F [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463363|gb|EFY08557.1| recombination protein F [Erysipelothrix rhusiopathiae ATCC 19414] Length = 361 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++E+ FR + + + F ++ + G NG GK+++ E++ +L G + R + Sbjct: 1 MKVKNLELKQFRNISNLN-LSFNKNINVFVGDNGQGKTNIIESLVYLSSGRSFRVSSDEY 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIQYGNE 66 >gi|325182712|emb|CCA17167.1| structural maintenance of chromosomes protein 3 put [Albugo laibachii Nc14] Length = 1215 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +S FR + + +E F+ +V G+NG GKS+ +AI + + Sbjct: 1 MHIKQVFVSGFRSYKDQLVVEPFSKEHNVVIGRNGTGKSNFFDAIRFGLLTSRFANLRTE 60 Query: 86 S 86 Sbjct: 61 D 61 >gi|227501772|ref|ZP_03931821.1| ATP-dependent OLD family endonuclease [Corynebacterium accolens ATCC 49725] gi|227077797|gb|EEI15760.1| ATP-dependent OLD family endonuclease [Corynebacterium accolens ATCC 49725] Length = 607 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L I FR E ++EF LT++ G+N GKS++ +A+ + RR Sbjct: 11 MWLESARIKGFRS-CEKTEVEFCPDLTLLVGENNAGKSNIIDALRLATAPLSGRRTR 66 >gi|254383773|ref|ZP_04999121.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194342666|gb|EDX23632.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 819 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + ++ FRG ++ + + +V G+NG GKSSL++AIE F G R Sbjct: 68 VYLGSLAVNGFRGIGPRARLSLSPRPGVNLVVGRNGSGKSSLADAIEVGFTGTRAHRPGQ 127 Query: 85 DSIK 88 D+ + Sbjct: 128 DATR 131 >gi|47104068|ref|YP_015497.1| putative exonuclease [Photobacterium profundum SS9] gi|46911632|emb|CAG17981.1| putative exonuclease[Photobacterium profundum SS9] Length = 665 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 26 IFKLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKH 83 I KL + IS+F+ F +I+F + LT + G NG GK+S +A+ +F + R+ Sbjct: 3 IMKLSKVRISNFQCFDQSQTEIDFEEQLTALIGLNGSGKTSTLQALSRMFGVSESARKIK 62 Query: 84 GDSIKKRSIKTPM 96 D S+ Sbjct: 63 VDDFHSPSVTVQR 75 >gi|114048011|ref|YP_738561.1| SMC domain-containing protein [Shewanella sp. MR-7] gi|113889453|gb|ABI43504.1| SMC domain protein [Shewanella sp. MR-7] Length = 1018 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F F Q I+F + L ++NG G GK++L + I + YG T + Sbjct: 1 MKPLSLSMSAFGPFASSQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|295401127|ref|ZP_06811101.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976920|gb|EFG52524.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 1117 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + I+ F E Q I+F + + G G GKS++ +A+ +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAMTLALFGSVER 58 >gi|312112097|ref|YP_003990413.1| SMC domain protein [Geobacillus sp. Y4.1MC1] gi|311217198|gb|ADP75802.1| SMC domain protein [Geobacillus sp. Y4.1MC1] Length = 1117 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + I+ F E Q I+F + + G G GKS++ +A+ +G +R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAMTLALFGSVER 58 >gi|146303545|ref|YP_001190861.1| SMC domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701795|gb|ABP94937.1| SMC domain protein [Metallosphaera sedula DSM 5348] Length = 858 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + F E + F + ++ GQNG GKSS+ EAI + + + K + Sbjct: 1 MRLDRVYLKDFLSH-EKTTVSFKGDINVIVGQNGAGKSSIIEAITFALF-REGKGKQEEM 58 Query: 87 IKKRSIKTPMPMCM 100 IKK + + + Sbjct: 59 IKKGKTNAELELVL 72 >gi|312622615|ref|YP_004024228.1| SMC domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203082|gb|ADQ46409.1| SMC domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 857 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K L + I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MKPLFLRIENFKSYKDSQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|255003571|ref|ZP_05278535.1| recombination protein F [Anaplasma marginale str. Puerto Rico] gi|255004698|ref|ZP_05279499.1| recombination protein F [Anaplasma marginale str. Virginia] Length = 371 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR +T ++E H ++ G NG GK+++ EAI L G R ++ Sbjct: 9 IQSIKLCNFRNYT-RAELESHGHSVVLLGANGSGKTNILEAISLLSKGPGLRNVSAACMQ 67 Query: 89 KRSIKTPMPMCMAV 102 R P + AV Sbjct: 68 NRESSAPWSVHHAV 81 >gi|308235535|ref|ZP_07666272.1| DNA replication and repair protein recF [Gardnerella vaginalis ATCC 14018] gi|311114016|ref|YP_003985237.1| recombination protein F [Gardnerella vaginalis ATCC 14019] gi|310945510|gb|ADP38214.1| recombination protein F [Gardnerella vaginalis ATCC 14019] Length = 422 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + HFR ++ ++F+ + ++ G NG GK+++ EAIE + G + R Sbjct: 1 MYVSRLVLDHFRSWSSCV-LDFSPKINVLFGSNGLGKTNIVEAIEVISTGTSHR 53 >gi|254506593|ref|ZP_05118734.1| ATPase involved in DNA repair [Vibrio parahaemolyticus 16] gi|219550466|gb|EED27450.1| ATPase involved in DNA repair [Vibrio parahaemolyticus 16] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 9/92 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + Q+I+F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLVLQAFGPFAQKQEIDFTQLGSNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HG-----DSIKKRSIKTPMPMCMAVPRCKYQL 109 + S+ T + + A+ Y++ Sbjct: 61 RQGIQMRSDLAPLSVPTEVTLDFALQGKTYRV 92 >gi|212545659|ref|XP_002152983.1| nuclear condensin complex subunit Smc4, putative [Penicillium marneffei ATCC 18224] gi|210064503|gb|EEA18598.1| nuclear condensin complex subunit Smc4, putative [Penicillium marneffei ATCC 18224] Length = 1464 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 249 MVITHLVLTNFKSYAGKQIVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 307 >gi|169617864|ref|XP_001802346.1| hypothetical protein SNOG_12112 [Phaeosphaeria nodorum SN15] gi|160703502|gb|EAT80524.2| hypothetical protein SNOG_12112 [Phaeosphaeria nodorum SN15] Length = 1552 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 263 ITWLVMTNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 319 >gi|67474252|ref|XP_652875.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56469773|gb|EAL47489.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 1241 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 31 DIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +EI+ R + +IEF LT++ G NG GK+++ E++ + G + +G + Sbjct: 6 KLEIAGIRSINPDKPVEIEFFKPLTLITGPNGAGKTTIIESVRYACTGTSPPNSNGGKL 64 >gi|241895510|ref|ZP_04782806.1| recombination protein F [Weissella paramesenteroides ATCC 33313] gi|241871256|gb|EER75007.1| recombination protein F [Weissella paramesenteroides ATCC 33313] Length = 383 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ +++++FR + E + F+ + + G N GK++L EAI L + R Sbjct: 1 MELMSLKLNNFRNY-ESLDVSFSSGVNVFLGPNAQGKTNLLEAIYVLALTRSHRTSTDKE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LISWQAK 66 >gi|114625960|ref|XP_001137043.1| PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 5 [Pan troglodytes] Length = 1106 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I + F+ + + ++ F + G NG GKS++ ++I +L + Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQGR 58 >gi|37676247|ref|NP_936643.1| putative exonuclease SbcC [Vibrio vulnificus YJ016] gi|37200788|dbj|BAC96613.1| putative exonuclease SbcC [Vibrio vulnificus YJ016] Length = 1021 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F E + I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPLKLTMQAFGPFAEREVIDFTQLGDNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|328883700|emb|CCA56939.1| DNA recombination and repair protein RecF [Streptomyces venezuelae ATCC 10712] Length = 373 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGANGQGKTNLVEAVGYLATLSSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|282849979|ref|ZP_06259362.1| putative DNA sulfur modification protein DndD [Veillonella parvula ATCC 17745] gi|282580416|gb|EFB85816.1| putative DNA sulfur modification protein DndD [Veillonella parvula ATCC 17745] Length = 1027 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F + + ++ G G GK+S+ +AI + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNELQDHSMFLIAGPTGAGKTSILDAIVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPHRM 76 >gi|303228506|ref|ZP_07315337.1| exonuclease SbcCD, C subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516864|gb|EFL58775.1| exonuclease SbcCD, C subunit [Veillonella atypica ACS-134-V-Col7a] Length = 1026 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F++ + +++G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFSELENHSMFLISGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPERM 76 >gi|124513128|ref|XP_001349920.1| chromosome segregation protein, putative [Plasmodium falciparum 3D7] gi|75015734|sp|Q8IED2|SMC2_PLAF7 RecName: Full=Structural maintenance of chromosomes protein 2 gi|23615337|emb|CAD52328.1| chromosome segregation protein, putative [Plasmodium falciparum 3D7] Length = 1218 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MYIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|332860068|ref|XP_001135642.2| PREDICTED: structural maintenance of chromosomes protein 1B isoform 1 [Pan troglodytes] Length = 1235 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|310794967|gb|EFQ30428.1| RecF/RecN/SMC N terminal domain-containing protein [Glomerella graminicola M1.001] Length = 1549 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + + G Sbjct: 269 ISYLILTNFKSYAGRQEVGPFHGSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 325 >gi|239980784|ref|ZP_04703308.1| recombination protein F [Streptomyces albus J1074] gi|291452642|ref|ZP_06592032.1| recombination protein F [Streptomyces albus J1074] gi|291355591|gb|EFE82493.1| recombination protein F [Streptomyces albus J1074] Length = 377 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + + +T G NG GK++L EA+ +L + R Sbjct: 1 MHVSHLSLADFRSYA-RADLALDPGVTAFVGPNGQGKTNLVEAVGYLATLSSHRVSSDQP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|254384254|ref|ZP_04999597.1| hypothetical protein SSAG_03811 [Streptomyces sp. Mg1] gi|194343142|gb|EDX24108.1| hypothetical protein SSAG_03811 [Streptomyces sp. Mg1] Length = 373 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 8/82 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QR 80 +L + ++ F F E Q+I+F + +++G G GK+S+ +A+ + YG R Sbjct: 1 MRLHRLRVTAFGPFAEPQEIDFDALSGAGIFLLHGPTGAGKTSVLDAVCYALYGSVPGSR 60 Query: 81 RKHGDSIK--KRSIKTPMPMCM 100 + G S++ + TP + + Sbjct: 61 QAPGTSLRSDHSAPDTPTEVTL 82 >gi|156084430|ref|XP_001609698.1| smc family/structural maintenance of chromosome [Babesia bovis] gi|154796950|gb|EDO06130.1| smc family/structural maintenance of chromosome [Babesia bovis] Length = 1213 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ ++ I H V G NG GKS++ +++ + + Sbjct: 1 MHIESIILDGFKSYSTRTVIGPLDPHFNAVTGLNGSGKSNVLDSLCFCLGIADLSCVRAN 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 KLDDLIYKQ 69 >gi|114686914|ref|XP_515195.2| PREDICTED: structural maintenance of chromosomes protein 1B isoform 2 [Pan troglodytes] Length = 1235 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|52549794|gb|AAU83643.1| chromosome assembly protein homolog [uncultured archaeon GZfos32E7] Length = 616 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGD 85 L +I + +F + E +I L +++G NG GKSS+ AI YT+R + Sbjct: 11 IWLKEIILENFMSY-EYARIPLKPGLNLISGPNGAGKSSILLAISVALGQIYTERSRRLR 69 Query: 86 SIKKRSIK 93 + +R + Sbjct: 70 DLIRRGKE 77 >gi|160945976|ref|ZP_02093202.1| hypothetical protein FAEPRAM212_03509 [Faecalibacterium prausnitzii M21/2] gi|158443707|gb|EDP20712.1| hypothetical protein FAEPRAM212_03509 [Faecalibacterium prausnitzii M21/2] Length = 934 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + ++ L ++ G G GK+++ +AI + Y ++ Sbjct: 1 MRPLRLTLSAFGPYAAEITLDLEKLGKGGLYLITGDTGAGKTTIFDAITYALYDHSSSGI 60 Query: 83 HGDSIKKRSI 92 S+ + Sbjct: 61 REGSMLRCKY 70 >gi|50953929|ref|YP_061217.1| recombination protein F [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648822|sp|Q6AHN3|RECF_LEIXX RecName: Full=DNA replication and repair protein recF gi|50950411|gb|AAT88112.1| DNA replication and repair protein RecF [Leifsonia xyli subsp. xyli str. CTCB07] Length = 385 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + ++ FR + ++ F + G+NG GK++L E++ +L + R + Sbjct: 1 MRVTHLSLTDFRNYG-TAEVHFEAGANLFVGRNGQGKTNLVESLGYLSALGSHRVSSDQA 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQ 108 + ++ + +AV R + Q Sbjct: 60 MIRQGAE------LAVVRARIQ 75 >gi|302872030|ref|YP_003840666.1| SMC domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574889|gb|ADL42680.1| SMC domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 857 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLFLRIENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|222529134|ref|YP_002573016.1| SMC domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455981|gb|ACM60243.1| SMC domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 857 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K L + I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MKPLFLRIENFKSYKDSQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|229523023|ref|ZP_04412435.1| exonuclease SbcC [Vibrio cholerae TM 11079-80] gi|229339873|gb|EEO04883.1| exonuclease SbcC [Vibrio cholerae TM 11079-80] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L++ + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLNLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|227827239|ref|YP_002829018.1| hypothetical protein M1425_0926 [Sulfolobus islandicus M.14.25] gi|229584460|ref|YP_002842961.1| hypothetical protein M1627_0993 [Sulfolobus islandicus M.16.27] gi|238619424|ref|YP_002914249.1| hypothetical protein M164_0973 [Sulfolobus islandicus M.16.4] gi|227459034|gb|ACP37720.1| conserved hypothetical protein [Sulfolobus islandicus M.14.25] gi|228019509|gb|ACP54916.1| conserved hypothetical protein [Sulfolobus islandicus M.16.27] gi|238380493|gb|ACR41581.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4] Length = 110 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + I +F+ + + + EF + IV G NG GK++L +A +L Sbjct: 2 IKRLRIKNFKSYRDSE-FEFGK-VNIVVGPNGSGKTNLVDAFSFL 44 >gi|167754087|ref|ZP_02426214.1| hypothetical protein ALIPUT_02375 [Alistipes putredinis DSM 17216] gi|167658712|gb|EDS02842.1| hypothetical protein ALIPUT_02375 [Alistipes putredinis DSM 17216] Length = 362 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-FYGYTQRRKHGD 85 L + + +F+ E +EF + G NG GK+++ +A+ +L + G Sbjct: 1 MYLKKLSLINFKNIREEN-LEFRPGINCFVGDNGAGKTNVIDAVYFLSMCKSSLAMTDGQ 59 Query: 86 SIKKRS 91 +++ S Sbjct: 60 NMRHGS 65 >gi|326802883|ref|YP_004320701.1| exonuclease SbcCD, C subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651362|gb|AEA01545.1| exonuclease SbcCD, C subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 1040 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 30 LDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +E++ F + ++ I+F L +++G G GK++L +AI + YG Sbjct: 4 LRLEMNAFGSYRDLTVIDFDRVRPYGLFMISGDTGAGKTTLFDAITYALYGGASGSSREA 63 Query: 86 SIKKRSIKTPMPM 98 S K T + + Sbjct: 64 SELKSRFATDLDL 76 >gi|300174121|ref|YP_003773287.1| hypothetical protein LEGAS_1820 [Leuconostoc gasicomitatum LMG 18811] gi|299888500|emb|CBL92468.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG 18811] Length = 528 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY--GYTQRRKHGD 85 + I + +F+ F E + EF +L ++ G+N GKSS+ +AI+ + G RR + Sbjct: 5 YISKISLKNFKKFKESE-FEFNPNLNVIIGENAAGKSSILQAIDIVLNQKGIDDRRFRNE 63 Query: 86 S 86 Sbjct: 64 Y 64 >gi|288573630|ref|ZP_06391987.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569371|gb|EFC90928.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 447 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L+++ +++FR + E F +TI+ G+NG GK+++ +AI + Y Sbjct: 2 LINLTLNNFRRY-EKAHFCFHPKMTILVGENGKGKTTILDAIAVMLGTY 49 >gi|153869299|ref|ZP_01998944.1| hypothetical protein BGP_1259 [Beggiatoa sp. PS] gi|152074179|gb|EDN71062.1| hypothetical protein BGP_1259 [Beggiatoa sp. PS] Length = 254 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGY 77 K+ + I +FR E I+F ++ +T++ G NG GK+S+ +A+ + Sbjct: 1 MKIHTLTIKNFRAI-EKLSIDFTNNWSQPRPVTLIVGPNGSGKTSILDAVLMVVRTS 56 >gi|292670881|ref|ZP_06604307.1| exonuclease SbcC [Selenomonas noxia ATCC 43541] gi|292647502|gb|EFF65474.1| exonuclease SbcC [Selenomonas noxia ATCC 43541] Length = 1026 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + + F + E Q ++F +++G G GK+++ +AI + YG + Sbjct: 1 MRPLKLRLQAFGSYVEEQVLDFETALANAPFVLIHGATGTGKTTILDAIVFALYGESSGN 60 Query: 82 KHGDSIKKRSIKTP 95 + + S P Sbjct: 61 IREGTTLRSSTAPP 74 >gi|124004628|ref|ZP_01689472.1| ATPase [Microscilla marina ATCC 23134] gi|123989751|gb|EAY29280.1| ATPase [Microscilla marina ATCC 23134] Length = 412 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++ I + +FR + E +IEF + IV G NG GK+++ EA+ Sbjct: 1 MRIDKIRLKNFRCY-EETEIEFHPNFNIVIGINGTGKTAVLEALT 44 >gi|19074483|ref|NP_585989.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1] gi|74697545|sp|Q8SRK6|RAD50_ENCCU RecName: Full=DNA repair protein RAD50 gi|19069125|emb|CAD25593.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 1247 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F+ E +EF LT++ G NG GK+++ E++++ G G Sbjct: 4 IKKLMIRGVRSFSHKESNTLEFYSPLTLIVGANGTGKTTIIESLKYATTGSLPPNSRG 61 >gi|332799247|ref|YP_004460746.1| SMC domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696982|gb|AEE91439.1| SMC domain protein [Tepidanaerobacter sp. Re1] Length = 480 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +++ +F+ E Q I+F + LT++ GQ GKS++ A++W+ Y Sbjct: 4 IKSLKLKNFQSHKESQ-IDFDEGLTVILGQTDQGKSAIIRALKWVLY 49 >gi|258507666|ref|YP_003170417.1| DNA repair ATPase [Lactobacillus rhamnosus GG] gi|257147593|emb|CAR86566.1| DNA repair ATPase [Lactobacillus rhamnosus GG] gi|259649014|dbj|BAI41176.1| exonuclease SbcC [Lactobacillus rhamnosus GG] Length = 1043 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + + F + + + F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MKLKQLHMQFFGPYADET-VNFEDFRTTPLFLISGPTGSGKTTIFDALVYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGMQMR 65 >gi|229553697|ref|ZP_04442422.1| exonuclease [Lactobacillus rhamnosus LMS2-1] gi|258538836|ref|YP_003173335.1| DNA repair ATPase SbcC [Lactobacillus rhamnosus Lc 705] gi|229312974|gb|EEN78947.1| exonuclease [Lactobacillus rhamnosus LMS2-1] gi|257150512|emb|CAR89484.1| DNA repair ATPase [Lactobacillus rhamnosus Lc 705] Length = 1043 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + + F + + + F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MKLKQLHMQFFGPYADET-VNFEDFRTSPLFLISGPTGSGKTTIFDALVYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGMQMR 65 >gi|199596950|ref|ZP_03210383.1| DNA repair ATPase [Lactobacillus rhamnosus HN001] gi|199592083|gb|EDZ00157.1| DNA repair ATPase [Lactobacillus rhamnosus HN001] Length = 1043 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + + F + + + F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MKLKQLHMQFFGPYADET-VNFEDFRTSPLFLISGPTGSGKTTIFDALVYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGMQMR 65 >gi|14600457|ref|NP_146972.1| DNA double-strand break repair rad50 ATPase [Aeropyrum pernix K1] gi|18203646|sp|Q9YFZ1|RAD50_AERPE RecName: Full=DNA double-strand break repair rad50 ATPase gi|5103499|dbj|BAA79020.1| DNA double-strand break repair rad50 ATPase [Aeropyrum pernix K1] Length = 919 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+ + I+F + T + G+NG GKS++ EAI + + R I Sbjct: 4 LKRLELRNIMSHF-NTSIDFREGFTAIVGRNGAGKSTILEAILFSITPHQAPR-RSSMIS 61 Query: 89 KRSIKTPMPMCM 100 + S + + + + Sbjct: 62 ENSSRGEIYLAL 73 >gi|329936093|ref|ZP_08285892.1| ATP-dependent OLD family endonuclease [Streptomyces griseoaurantiacus M045] gi|329304411|gb|EGG48290.1| ATP-dependent OLD family endonuclease [Streptomyces griseoaurantiacus M045] Length = 650 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I +FR +I+ +EF +T++ G+N GKS++ EA+ +R Sbjct: 1 MYLRQLGIKNFRSCYDIE-VEFRSGITLLVGENNSGKSNVIEALRLATTPLNRRSTR 56 >gi|150026041|ref|YP_001296867.1| DNA replication and repair protein RecF [Flavobacterium psychrophilum JIP02/86] gi|226737800|sp|A6H141|RECF_FLAPJ RecName: Full=DNA replication and repair protein recF gi|149772582|emb|CAL44065.1| DNA replication and repair protein RecF [Flavobacterium psychrophilum JIP02/86] Length = 359 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I + +F+ F++ F + G+NG GK+++ +AI L +G + Sbjct: 1 MYLKKISLFNFKNFSD-TSFNFEHKINCFVGKNGVGKTNVLDAIYHLSFGKS 51 >gi|226940717|ref|YP_002795791.1| RecF [Laribacter hongkongensis HLHK9] gi|226715644|gb|ACO74782.1| RecF [Laribacter hongkongensis HLHK9] Length = 610 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL IE+ +F+G ++ +T++ G+NG GKSSL EA+ G R Sbjct: 1 MKLTRIEVQNFQGLRS-ARLALTTPVTLIAGRNGAGKSSLLEAVRMAMSGDPVRVARKKD 59 >gi|170727400|ref|YP_001761426.1| SMC domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812747|gb|ACA87331.1| SMC domain protein [Shewanella woodyi ATCC 51908] Length = 1018 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q+++F+ + L ++NG G GK+++ +AI + YG T + Sbjct: 1 MRPLRLAMSAFGPFASTQEVDFSALGTNPLFLINGPTGAGKTTILDAICFALYGKTTGDE 60 Query: 83 HGDSIKKRSI 92 S + + Sbjct: 61 REGSQMRCDV 70 >gi|325104296|ref|YP_004273950.1| SMC domain protein [Pedobacter saltans DSM 12145] gi|324973144|gb|ADY52128.1| SMC domain protein [Pedobacter saltans DSM 12145] Length = 713 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + ++R F +F + + G+NG GK+++ AI L + + + Sbjct: 1 MYISKVSLVNYRNFA-NASFQFNKGINTIIGENGSGKTNVFRAIRLLLEDASLQYAYK 57 >gi|220913050|ref|YP_002488359.1| SMC domain protein [Arthrobacter chlorophenolicus A6] gi|219859928|gb|ACL40270.1| SMC domain protein [Arthrobacter chlorophenolicus A6] Length = 1025 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + IS F F + ++F L ++NG G GK+S+ +AI + YG + Sbjct: 1 MRIHHLRISGFGPFAGTEDVDFDRLSGHGLFLLNGPTGAGKTSVLDAICFALYG-SVPGA 59 Query: 83 HGDSIKKRS 91 D + RS Sbjct: 60 RQDGKRLRS 68 >gi|70944837|ref|XP_742306.1| chromosome segregation protein [Plasmodium chabaudi chabaudi] gi|56521210|emb|CAH75549.1| chromosome segregation protein, putative [Plasmodium chabaudi chabaudi] Length = 634 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + F+ +T+ F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVNR 60 Query: 87 IKKRSIKT 94 + + K Sbjct: 61 LDELIYKQ 68 >gi|327334561|gb|EGE76272.1| RecF protein [Propionibacterium acnes HL097PA1] Length = 394 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 1 MFVERLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRLGADQ 67 >gi|313829192|gb|EFS66906.1| DNA replication and repair protein RecF [Propionibacterium acnes HL063PA2] Length = 204 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|313765023|gb|EFS36387.1| recombination protein F [Propionibacterium acnes HL013PA1] gi|313815420|gb|EFS53134.1| recombination protein F [Propionibacterium acnes HL059PA1] gi|314916216|gb|EFS80047.1| recombination protein F [Propionibacterium acnes HL005PA4] gi|314917483|gb|EFS81314.1| recombination protein F [Propionibacterium acnes HL050PA1] gi|314921819|gb|EFS85650.1| recombination protein F [Propionibacterium acnes HL050PA3] gi|314930916|gb|EFS94747.1| recombination protein F [Propionibacterium acnes HL067PA1] gi|314955288|gb|EFS99693.1| recombination protein F [Propionibacterium acnes HL027PA1] gi|314959161|gb|EFT03263.1| recombination protein F [Propionibacterium acnes HL002PA1] gi|315099339|gb|EFT71315.1| recombination protein F [Propionibacterium acnes HL059PA2] gi|315102320|gb|EFT74296.1| recombination protein F [Propionibacterium acnes HL046PA1] gi|327454255|gb|EGF00910.1| recombination protein F [Propionibacterium acnes HL087PA3] gi|327456315|gb|EGF02970.1| recombination protein F [Propionibacterium acnes HL083PA2] gi|328756013|gb|EGF69629.1| recombination protein F [Propionibacterium acnes HL087PA1] gi|328758856|gb|EGF72472.1| recombination protein F [Propionibacterium acnes HL025PA2] Length = 401 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|295129533|ref|YP_003580196.1| DNA recombination and repair protein RecF [Propionibacterium acnes SK137] gi|291377073|gb|ADE00928.1| DNA recombination and repair protein RecF [Propionibacterium acnes SK137] gi|313771063|gb|EFS37029.1| recombination protein F [Propionibacterium acnes HL074PA1] gi|313806859|gb|EFS45357.1| recombination protein F [Propionibacterium acnes HL087PA2] gi|313811772|gb|EFS49486.1| recombination protein F [Propionibacterium acnes HL083PA1] gi|313814218|gb|EFS51932.1| recombination protein F [Propionibacterium acnes HL025PA1] gi|313817646|gb|EFS55360.1| recombination protein F [Propionibacterium acnes HL046PA2] gi|313821529|gb|EFS59243.1| recombination protein F [Propionibacterium acnes HL036PA1] gi|313824527|gb|EFS62241.1| recombination protein F [Propionibacterium acnes HL036PA2] gi|313826196|gb|EFS63910.1| recombination protein F [Propionibacterium acnes HL063PA1] gi|313832306|gb|EFS70020.1| recombination protein F [Propionibacterium acnes HL007PA1] gi|313832766|gb|EFS70480.1| recombination protein F [Propionibacterium acnes HL056PA1] gi|314926330|gb|EFS90161.1| recombination protein F [Propionibacterium acnes HL036PA3] gi|314961666|gb|EFT05767.1| recombination protein F [Propionibacterium acnes HL002PA2] gi|314969080|gb|EFT13178.1| recombination protein F [Propionibacterium acnes HL037PA1] gi|314975201|gb|EFT19296.1| recombination protein F [Propionibacterium acnes HL053PA1] gi|314977614|gb|EFT21709.1| recombination protein F [Propionibacterium acnes HL045PA1] gi|314980254|gb|EFT24348.1| recombination protein F [Propionibacterium acnes HL072PA2] gi|314985200|gb|EFT29292.1| recombination protein F [Propionibacterium acnes HL005PA1] gi|315081494|gb|EFT53470.1| recombination protein F [Propionibacterium acnes HL078PA1] gi|315083083|gb|EFT55059.1| recombination protein F [Propionibacterium acnes HL027PA2] gi|315086616|gb|EFT58592.1| recombination protein F [Propionibacterium acnes HL002PA3] gi|315088018|gb|EFT59994.1| recombination protein F [Propionibacterium acnes HL072PA1] gi|315097159|gb|EFT69135.1| recombination protein F [Propionibacterium acnes HL038PA1] gi|315109863|gb|EFT81839.1| recombination protein F [Propionibacterium acnes HL030PA2] gi|327332503|gb|EGE74238.1| RecF protein [Propionibacterium acnes HL096PA2] gi|327333676|gb|EGE75393.1| RecF protein [Propionibacterium acnes HL096PA3] gi|327444466|gb|EGE91120.1| recombination protein F [Propionibacterium acnes HL013PA2] gi|327446720|gb|EGE93374.1| recombination protein F [Propionibacterium acnes HL043PA2] gi|327448838|gb|EGE95492.1| recombination protein F [Propionibacterium acnes HL043PA1] gi|328757973|gb|EGF71589.1| recombination protein F [Propionibacterium acnes HL020PA1] gi|328759814|gb|EGF73405.1| RecF protein [Propionibacterium acnes HL099PA1] Length = 401 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|224048768|ref|XP_002196915.1| PREDICTED: structural maintenance of chromosomes 6 [Taeniopygia guttata] Length = 1095 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F +L V G NG GKSS+ A+ G G S+K Sbjct: 56 IESIQLKNFMCHSNLGPFQFGSNLNFVIGTNGSGKSSVLTALIVGLGGKATATNRGSSLK 115 Query: 89 KRSIKTPMPMCMAV 102 K +++ Sbjct: 116 MFIQKGETSADISI 129 >gi|289424466|ref|ZP_06426249.1| DNA replication and repair protein RecF [Propionibacterium acnes SK187] gi|289427445|ref|ZP_06429158.1| DNA replication and repair protein RecF [Propionibacterium acnes J165] gi|289155163|gb|EFD03845.1| DNA replication and repair protein RecF [Propionibacterium acnes SK187] gi|289159375|gb|EFD07566.1| DNA replication and repair protein RecF [Propionibacterium acnes J165] gi|332674402|gb|AEE71218.1| recombination protein F [Propionibacterium acnes 266] Length = 394 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 1 MFVERLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRLGADQ 67 >gi|260588814|ref|ZP_05854727.1| RecF protein [Blautia hansenii DSM 20583] gi|260540593|gb|EEX21162.1| RecF protein [Blautia hansenii DSM 20583] Length = 361 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+ ++R + + +EF I G N GK+++ EA + R Sbjct: 1 MYIESIELKNYRNYNSLA-LEFDKGTNIFYGDNAQGKTNILEAAYLCSTTKSHRGSKDRE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|167624621|ref|YP_001674915.1| SMC domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354643|gb|ABZ77256.1| SMC domain protein [Shewanella halifaxensis HAW-EB4] Length = 1018 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +E+S F F Q +F ++ L ++NG G GK++L +AI + YG T + Sbjct: 1 MRPITLEMSAFGPFASTQMTDFAALGSNPLFLINGPTGAGKTTLLDAICFALYGKTTGDE 60 Query: 83 HGDSIKKR-----SIKTPMPMCMAVPRCKYQLK 110 S + S+ T + A+ +Y+++ Sbjct: 61 REGSQMRCDLAPDSLLTEVTFSFALGDKQYRIR 93 >gi|145524291|ref|XP_001447973.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415506|emb|CAK80576.1| unnamed protein product [Paramecium tetraurelia] Length = 1153 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +I I F+ + + I + G NG GKS++ +AI + Sbjct: 1 MWIKEIIIEGFKSYAQRTVITSLDPEFNAITGLNGSGKSNILDAILFCLG 50 >gi|326470448|gb|EGD94457.1| nuclear condensin complex subunit Smc4 [Trichophyton tonsurans CBS 112818] Length = 1431 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 225 MVITHLVLTNFKSYAGQQYVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 283 >gi|325124859|gb|ADY84189.1| DNA repair and genetic recombination protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 381 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLSRFKQSGFRNLA-PLDLEFDPHVNVFLGENAQGKTNLLEAIYFLAISRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|326478631|gb|EGE02641.1| chromosomes protein 4 structural maintenance [Trichophyton equinum CBS 127.97] Length = 1431 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 225 MVITHLVLTNFKSYAGQQYVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 283 >gi|320590923|gb|EFX03364.1| nuclear condensin complex subunit [Grosmannia clavigera kw1407] Length = 1522 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + Sbjct: 246 APKPRIVIAYLILTNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASK 305 Query: 81 RKHG 84 + G Sbjct: 306 MRQG 309 >gi|297559605|ref|YP_003678579.1| exonuclease [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844053|gb|ADH66073.1| exonuclease [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 995 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F F ++++F L +++G G GK+++ +A+ + YG Sbjct: 1 MRLHTLTVQAFGPFAGTEEVDFDRLSAGGLFLIHGPTGAGKTTVLDAVCFALYG----NV 56 Query: 83 HGDSIKKRSIKTPMPMCMAVPR 104 G K RS K+ A PR Sbjct: 57 PGARGKDRSPKSDHAPLDAEPR 78 >gi|224541291|ref|ZP_03681830.1| hypothetical protein CATMIT_00451 [Catenibacterium mitsuokai DSM 15897] gi|224525795|gb|EEF94900.1| hypothetical protein CATMIT_00451 [Catenibacterium mitsuokai DSM 15897] Length = 364 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + FR + E Q F + I+ G N GK+++ EAI L + + + D Sbjct: 1 MEIKTLNLIQFRNY-EKQTFHFHPLVNIIIGDNAQGKTNILEAIYLLSTTRSFKSRMLDE 59 Query: 87 IK 88 + Sbjct: 60 MI 61 >gi|119579378|gb|EAW58974.1| SMC2 structural maintenance of chromosomes 2-like 1 (yeast), isoform CRA_b [Homo sapiens] Length = 1147 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + F+ + + ++ F + G NG GKS++ ++I +L Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLG 50 >gi|157864643|ref|XP_001681030.1| structural maintenance of chromosome 3 protein [Leishmania major strain Friedlin] gi|68124324|emb|CAJ02179.1| putative adaptor complex protein (AP) 3 delta subunit 1 [Leishmania major strain Friedlin] Length = 1198 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL----TIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + E F D L ++ G+NG GKS+ AI+++ Sbjct: 1 MFIKNIIISGFRSYREQS---FPDGLSPRTNVIVGKNGSGKSNFFAAIQFVLNE 51 >gi|145329965|ref|NP_001077968.1| TTN7 (TITAN7); ATP binding / protein binding [Arabidopsis thaliana] gi|145360381|ref|NP_180285.4| TTN7 (TITAN7); ATP binding / protein binding [Arabidopsis thaliana] gi|62319915|dbj|BAD93989.1| putative chromosome associated protein [Arabidopsis thaliana] gi|330252854|gb|AEC07948.1| structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) [Arabidopsis thaliana] gi|330252855|gb|AEC07949.1| structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) [Arabidopsis thaliana] Length = 1204 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 49 >gi|41584495|gb|AAS09910.1| SMC3 [Arabidopsis thaliana] Length = 1204 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 49 >gi|23476966|emb|CAD43403.2| SMC3 protein [Arabidopsis thaliana] Length = 1205 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 49 >gi|88807230|ref|ZP_01122742.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. WH 7805] gi|88788444|gb|EAR19599.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. WH 7805] Length = 1183 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 18/46 (39%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I T+V G NG GKS++ + + + R D + Sbjct: 2 SIPLEPGFTVVTGPNGSGKSNILDGVLFCLGLANSRGMRADRLPDL 47 >gi|315273169|ref|ZP_07869215.1| DNA replication and repair protein RecF [Listeria marthii FSL S4-120] gi|313616205|gb|EFR89284.1| DNA replication and repair protein RecF [Listeria marthii FSL S4-120] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|311694086|gb|ADP96959.1| protein containing RecF/RecN/SMC protein, N-terminal domain [marine bacterium HP15] Length = 686 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 13 LSKSLTSYY-ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +S+ Y +LI KL + +S+FR F + D +T + G+NG GK++ EA+ Sbjct: 33 LPQSIKRYKDGLELIMKLHTMRLSNFRSFGQTPTTILLDDITYLIGRNGSGKTAALEAL 91 >gi|269793478|ref|YP_003312933.1| DNA repair ATPase [Sanguibacter keddieii DSM 10542] gi|269095663|gb|ACZ20099.1| ATPase involved in DNA repair [Sanguibacter keddieii DSM 10542] Length = 1047 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F ++F+ + ++ G G GKS+L +A+ + YG Sbjct: 1 MQLHSMTLQAIGPFAGRHTVDFSALAASGIFLLEGPTGAGKSTLIDAVVFALYGKVASAA 60 Query: 83 HGDSIKKRSI 92 D + + Sbjct: 61 TSDDRLRSAY 70 >gi|255027379|ref|ZP_05299365.1| recombination protein F [Listeria monocytogenes FSL J2-003] Length = 340 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|255023617|ref|ZP_05295603.1| recombination protein F [Listeria monocytogenes FSL J1-208] Length = 317 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|224498302|ref|ZP_03666651.1| recombination protein F [Listeria monocytogenes Finland 1988] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|217965930|ref|YP_002351608.1| DNA replication and repair protein RecF [Listeria monocytogenes HCC23] gi|254790481|sp|B8DAQ5|RECF_LISMH RecName: Full=DNA replication and repair protein recF gi|217335200|gb|ACK40994.1| DNA replication and repair protein RecF [Listeria monocytogenes HCC23] gi|307569528|emb|CAR82707.1| DNA replication and repair protein [Listeria monocytogenes L99] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|254930864|ref|ZP_05264223.1| recombination protein F [Listeria monocytogenes HPB2262] gi|293582409|gb|EFF94441.1| recombination protein F [Listeria monocytogenes HPB2262] gi|328476148|gb|EGF46854.1| recombination protein F [Listeria monocytogenes 220] gi|332310338|gb|EGJ23433.1| DNA replication and repair protein recF [Listeria monocytogenes str. Scott A] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|254830703|ref|ZP_05235358.1| recombination protein F [Listeria monocytogenes 10403S] gi|290892042|ref|ZP_06555039.1| recombination protein F [Listeria monocytogenes FSL J2-071] gi|290558636|gb|EFD92153.1| recombination protein F [Listeria monocytogenes FSL J2-071] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|16802053|ref|NP_463538.1| recombination protein F [Listeria monocytogenes EGD-e] gi|46906229|ref|YP_012618.1| recombination protein F [Listeria monocytogenes serotype 4b str. F2365] gi|47097287|ref|ZP_00234845.1| DNA replication and repair protein RecF [Listeria monocytogenes str. 1/2a F6854] gi|224503072|ref|ZP_03671379.1| recombination protein F [Listeria monocytogenes FSL R2-561] gi|226222644|ref|YP_002756751.1| RecF protein [Listeria monocytogenes Clip81459] gi|254824775|ref|ZP_05229776.1| recombination protein F [Listeria monocytogenes FSL J1-194] gi|254827429|ref|ZP_05232116.1| recombination protein F [Listeria monocytogenes FSL N3-165] gi|254851837|ref|ZP_05241185.1| recombination protein F [Listeria monocytogenes FSL R2-503] gi|254899681|ref|ZP_05259605.1| recombination protein F [Listeria monocytogenes J0161] gi|254913116|ref|ZP_05263128.1| DNA replication and repair protein RecF [Listeria monocytogenes J2818] gi|254937497|ref|ZP_05269194.1| recombination protein F [Listeria monocytogenes F6900] gi|255520065|ref|ZP_05387302.1| recombination protein F [Listeria monocytogenes FSL J1-175] gi|284803261|ref|YP_003415126.1| recombination protein F [Listeria monocytogenes 08-5578] gi|284996402|ref|YP_003418170.1| recombination protein F [Listeria monocytogenes 08-5923] gi|300763381|ref|ZP_07073379.1| DNA replication and repair protein RecF [Listeria monocytogenes FSL N1-017] gi|20978583|sp|Q8YAV8|RECF_LISMO RecName: Full=DNA replication and repair protein recF gi|51316269|sp|Q725G6|RECF_LISMF RecName: Full=DNA replication and repair protein recF gi|259563663|sp|C1L302|RECF_LISMC RecName: Full=DNA replication and repair protein recF gi|16409364|emb|CAC98220.1| RecF protein [Listeria monocytogenes EGD-e] gi|46879493|gb|AAT02795.1| DNA replication and repair protein RecF [Listeria monocytogenes serotype 4b str. F2365] gi|47014332|gb|EAL05307.1| DNA replication and repair protein RecF [Listeria monocytogenes str. 1/2a F6854] gi|225875106|emb|CAS03794.1| RecF protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599807|gb|EEW13132.1| recombination protein F [Listeria monocytogenes FSL N3-165] gi|258605129|gb|EEW17737.1| recombination protein F [Listeria monocytogenes FSL R2-503] gi|258610099|gb|EEW22707.1| recombination protein F [Listeria monocytogenes F6900] gi|284058823|gb|ADB69764.1| recombination protein F [Listeria monocytogenes 08-5578] gi|284061869|gb|ADB72808.1| recombination protein F [Listeria monocytogenes 08-5923] gi|293591118|gb|EFF99452.1| DNA replication and repair protein RecF [Listeria monocytogenes J2818] gi|293594014|gb|EFG01775.1| recombination protein F [Listeria monocytogenes FSL J1-194] gi|300515658|gb|EFK42707.1| DNA replication and repair protein RecF [Listeria monocytogenes FSL N1-017] Length = 370 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMPMCMA 101 I + M +A Sbjct: 60 FIMWEKEEAKMEGRIA 75 >gi|284164775|ref|YP_003403054.1| SMC domain protein [Haloterrigena turkmenica DSM 5511] gi|284014430|gb|ADB60381.1| SMC domain protein [Haloterrigena turkmenica DSM 5511] Length = 895 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHG 84 ++ + + +F+ + E + +T+V+G NG GKS+L EA+ + YG R Sbjct: 1 MRVDRVRLLNFKCYGE-ADLGLERGVTVVHGVNGSGKSTLLEAVFFALYGSKALDDRTLD 59 Query: 85 DSIKKRSIKTPMPM 98 D I + + + Sbjct: 60 DVIMTGEEEAEVEL 73 >gi|119355860|ref|YP_910504.1| DNA replication and repair protein RecF [Chlorobium phaeobacteroides DSM 266] gi|119353209|gb|ABL64080.1| DNA replication and repair protein RecF [Chlorobium phaeobacteroides DSM 266] Length = 365 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I ++FR + E +T++ G NG GK+++ E I + Sbjct: 1 MRLTRITYNNFRNYR-KMTFEPNAGITLLYGSNGSGKTNILEGIHYCALTKGFTSIADSD 59 Query: 87 IKKRSIK 93 S Sbjct: 60 CIFDSSD 66 >gi|114625956|ref|XP_001137218.1| PREDICTED: structural maintenance of chromosomes 2-like 1 isoform 7 [Pan troglodytes] Length = 1147 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + F+ + + ++ F + G NG GKS++ ++I +L Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLG 50 >gi|327299094|ref|XP_003234240.1| nuclear condensin complex subunit Smc2 [Trichophyton rubrum CBS 118892] gi|326463134|gb|EGD88587.1| nuclear condensin complex subunit Smc2 [Trichophyton rubrum CBS 118892] Length = 1183 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|320586130|gb|EFW98809.1| nuclear condensin complex subunit [Grosmannia clavigera kw1407] Length = 1180 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++I I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRVIEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|302872926|ref|YP_003841559.1| DNA replication and repair protein RecF [Clostridium cellulovorans 743B] gi|307687879|ref|ZP_07630325.1| recombination protein F [Clostridium cellulovorans 743B] gi|302575783|gb|ADL49795.1| DNA replication and repair protein RecF [Clostridium cellulovorans 743B] Length = 364 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ +FR + E+ I+ + + G N GK+++ EAI + G + R Sbjct: 1 MFIENLKLRNFRNYKELN-IDLYSGVNVFTGDNAQGKTNVLEAIYYCSLGKSHRTNKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|119961889|ref|YP_948278.1| nuclease sbcCD subunit C [Arthrobacter aurescens TC1] gi|119948748|gb|ABM07659.1| putative nuclease sbcCD subunit C [Arthrobacter aurescens TC1] Length = 1004 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 ++ ++I F F Q I+F A L ++NG G GK+S+ +AI + YG Sbjct: 1 MRIHRLDIEAFGPFATPQHIDFDHLSAQGLFLLNGATGAGKTSILDAICFALYGSVPGAR 60 Query: 77 YTQRRKHGD 85 +R D Sbjct: 61 QEGKRLRSD 69 >gi|66517561|ref|XP_393700.2| PREDICTED: structural maintenance of chromosomes protein 3 [Apis mellifera] Length = 1202 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|332026926|gb|EGI67027.1| DNA repair protein RAD50 [Acromyrmex echinatior] Length = 1520 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 28 KLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + R F + + I F+ LT++ G NG GK+++ EA+++ G Sbjct: 3 KVRKLALRGIRNFGDDSEDAIIRFSCPLTLILGPNGTGKTTIIEALKYATTG 54 >gi|290975093|ref|XP_002670278.1| structural maintenance of chromosome 3 [Naegleria gruberi] gi|284083835|gb|EFC37534.1| structural maintenance of chromosome 3 [Naegleria gruberi] Length = 936 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I F+ + + EF+ I+ G+NG GKS+ AI ++ + Sbjct: 1 MHIKSVTIQGFKSYRDQTFTSQEFSASQNIIVGRNGSGKSNFFSAISFVLSEKFSK 56 >gi|222445751|ref|ZP_03608266.1| hypothetical protein METSMIALI_01393 [Methanobrevibacter smithii DSM 2375] gi|222435316|gb|EEE42481.1| hypothetical protein METSMIALI_01393 [Methanobrevibacter smithii DSM 2375] Length = 649 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +FR + +K + A +T++ G N GK++L AI W Y Sbjct: 3 LNSVYIENFRIYRGPEKFDIASGNKKITVIQGNNDAGKTTLMNAISWCLY 52 >gi|189194603|ref|XP_001933640.1| condensin subunit Cut3 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979204|gb|EDU45830.1| condensin subunit Cut3 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1471 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +++F+ + Q++ F + V G NG GKS++ +++ ++F + Sbjct: 266 ITWLVLNNFKSYAGRQEVGPFHASFSSVVGPNGSGKSNVIDSLLFVFG------FRASKM 319 Query: 88 KKRSIKTPMPMCMAVPRCKY 107 ++ + + A P Y Sbjct: 320 RQSKLSALIHNSAAFPDLDY 339 >gi|223940285|ref|ZP_03632143.1| DNA replication and repair protein RecF [bacterium Ellin514] gi|223891052|gb|EEF57555.1| DNA replication and repair protein RecF [bacterium Ellin514] Length = 361 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + ++FA ++ G N GK+++ EAI + + R G Sbjct: 1 MHLAHLRLRDFRNYP-RLDVDFAPGFQVLLGDNAQGKTNILEAIYLMATLRSFRGVGGSQ 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 MVRHGQK 66 >gi|193208595|ref|NP_001122999.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-50) [Caenorhabditis elegans] gi|148472886|emb|CAN86608.1| C. elegans protein T04H1.4b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1312 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 25 LIFKLLDIEISHFRGFTEI----QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ K L + I R + KI+F T+++G NG GK++ EA+ ++ G Sbjct: 14 LMAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMPT 73 Query: 81 RKHGDSIKKRSIKTPMPMCMAV 102 +K + I + + +V Sbjct: 74 QKKQNFIHSTDVARKTRVDASV 95 >gi|78188238|ref|YP_378576.1| ATPase [Chlorobium chlorochromatii CaD3] gi|78170437|gb|ABB27533.1| ATPase [Chlorobium chlorochromatii CaD3] Length = 403 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR E IEF + LT++ G NG GK+++ + I Sbjct: 1 MRLKSMRLENFRA-VEHAVIEFGNRLTLLIGANGSGKTTILDGIAIALG 48 >gi|320533580|ref|ZP_08034228.1| hypothetical protein HMPREF9057_02115 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134206|gb|EFW26506.1| hypothetical protein HMPREF9057_02115 [Actinomyces sp. oral taxon 171 str. F0337] Length = 738 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + ++ + + I+F A ++ G G GK+++ +AI + YG Sbjct: 1 MRIHSLTMTGIGPYAGQEHIDFDAVGASGRFLLTGPTGSGKTTIIDAIVFALYGDVADSA 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DSSKERIRS 69 >gi|225678645|gb|EEH16929.1| condensin subunit Cut3 [Paracoccidioides brasiliensis Pb03] Length = 1448 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 243 MVITHLVMTNFKSYAGRQIVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 301 >gi|167763836|ref|ZP_02435963.1| hypothetical protein BACSTE_02216 [Bacteroides stercoris ATCC 43183] gi|167697952|gb|EDS14531.1| hypothetical protein BACSTE_02216 [Bacteroides stercoris ATCC 43183] Length = 653 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + +F+G + I F+D T+V G+NG GK+++ ++ WL +G + + Sbjct: 4 IKLKSLSLVNFKGIRSLN-IGFSDAETLVAGENGTGKTTVFDSFLWLLFGKDSTGRSDSN 62 Query: 87 IKKRSIKT 94 +++ + Sbjct: 63 FNIKTLDS 70 >gi|159029839|emb|CAO90893.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1009 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 4 LQLTLKNFLSYREAV-LDFRGLHTACICGANGAGKSSLLEAITWAIWGESRVSIGDDVI 61 >gi|110738867|dbj|BAF01356.1| putative chromosome associated protein [Arabidopsis thaliana] Length = 465 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 49 >gi|160872204|ref|ZP_02062336.1| DNA replication and repair protein RecF [Rickettsiella grylli] gi|159121003|gb|EDP46341.1| DNA replication and repair protein RecF [Rickettsiella grylli] Length = 363 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ ++FR E+ +EF+ H + G+NG GKSSL EAI +L G + R Sbjct: 1 MHLFRLKTNYFRNLAELD-LEFSPHFNFIYGKNGSGKSSLLEAIYFLSLGRSFRS 54 >gi|327351429|gb|EGE80286.1| condensin subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1464 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 254 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 313 Query: 81 RKHG 84 + G Sbjct: 314 MRQG 317 >gi|226295006|gb|EEH50426.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1448 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 243 MVITHLVMTNFKSYAGRQIVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 301 >gi|154500878|ref|ZP_02038916.1| hypothetical protein BACCAP_04563 [Bacteroides capillosus ATCC 29799] gi|150270378|gb|EDM97704.1| hypothetical protein BACCAP_04563 [Bacteroides capillosus ATCC 29799] Length = 1098 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + I+ L ++ G G GK+++ +AI + YG Sbjct: 1 MRPLKLTVSAFGPYAGRVTIDLEKLGPKGLYLITGDTGAGKTTIFDAITYALYGEPSGDN 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 REVSMFRSKYAQP 73 >gi|153816316|ref|ZP_01968984.1| hypothetical protein RUMTOR_02567 [Ruminococcus torques ATCC 27756] gi|317500801|ref|ZP_07959015.1| hypothetical protein HMPREF1026_00958 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089721|ref|ZP_08338618.1| hypothetical protein HMPREF1025_02201 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846369|gb|EDK23287.1| hypothetical protein RUMTOR_02567 [Ruminococcus torques ATCC 27756] gi|316897810|gb|EFV19867.1| hypothetical protein HMPREF1026_00958 [Lachnospiraceae bacterium 8_1_57FAA] gi|330404302|gb|EGG83848.1| hypothetical protein HMPREF1025_02201 [Lachnospiraceae bacterium 3_1_46FAA] Length = 877 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +S F ++ ++ I+F L +V G G GK+++ +A+ + Y T + Sbjct: 1 MRPIKLTMSAFGSYSGMETIDFTKIQGGLFLVTGDTGAGKTTIFDAVTYALYDRTSGGRR 60 Query: 84 GDSIKKRSI 92 ++ + Sbjct: 61 DGNMMRSQY 69 >gi|104781356|ref|YP_607854.1| hypothetical protein PSEEN2231 [Pseudomonas entomophila L48] gi|95110343|emb|CAK15050.1| hypothetical protein PSEEN2231 [Pseudomonas entomophila L48] Length = 568 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + I +FR T Q I D T++ G N GK++ + + F GY + + D Sbjct: 7 MKVTSVRIKNFRTITAEQVINIRDGCTLI-GPNNSGKTNAMLGVYYFFTGYDNKYGYDD 64 >gi|312897934|ref|ZP_07757347.1| putative DNA sulfur modification protein DndD [Megasphaera micronuciformis F0359] gi|310620968|gb|EFQ04515.1| putative DNA sulfur modification protein DndD [Megasphaera micronuciformis F0359] Length = 1015 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +E+ F + Q ++F L ++ G G GK+++ +AI + YG+T + Sbjct: 1 MRPIYLEMDAFGPYAGRQVLDFRLLGDKTLFLIYGPTGAGKTTILDAITYALYGHTSGNE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + + TP M Sbjct: 61 RTGAHMRSEHATPETM 76 >gi|298480017|ref|ZP_06998216.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298273826|gb|EFI15388.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 653 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + +F+G + I F+D T+V G+NG GK+++ ++ WL +G + + Sbjct: 4 IKLKSLSLVNFKGIRSLN-IGFSDAETLVAGENGTGKTTVFDSFLWLLFGKDSTGRSDSN 62 Query: 87 IKKRSIKT 94 +++ + Sbjct: 63 FNIKTLDS 70 >gi|296083795|emb|CBI24012.3| unnamed protein product [Vitis vinifera] Length = 1205 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + V G NG GK++ AI ++ Sbjct: 1 MYIKQVIIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVL 49 >gi|222475581|ref|YP_002563998.1| RECF protein (recF) [Anaplasma marginale str. Florida] gi|222419719|gb|ACM49742.1| RECF protein (recF) [Anaplasma marginale str. Florida] Length = 371 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR +T ++E H ++ G+NG GK+++ EAI L G R ++ Sbjct: 9 IQSIKLCNFRNYT-RAELESHGHSVVLLGENGSGKTNILEAISLLSKGPGLRNVSAACMQ 67 Query: 89 KRSIKTPMPMCMAV 102 R P + AV Sbjct: 68 NRESSAPWSVHHAV 81 >gi|56417217|ref|YP_154291.1| recombination protein F [Anaplasma marginale str. St. Maries] gi|56388449|gb|AAV87036.1| RECF protein [Anaplasma marginale str. St. Maries] Length = 371 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR +T ++E H ++ G+NG GK+++ EAI L G R ++ Sbjct: 9 IQSIKLCNFRNYT-RAELESHGHSVVLLGENGSGKTNILEAISLLSKGPGLRNVSAACMQ 67 Query: 89 KRSIKTPMPMCMAV 102 R P + AV Sbjct: 68 NRESSAPWSVHHAV 81 >gi|332860066|ref|XP_003317352.1| PREDICTED: structural maintenance of chromosomes protein 1B [Pan troglodytes] Length = 1161 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + +F+ + Q I T + G NG GKS++ +A+ ++ Sbjct: 4 LELLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIA 54 >gi|332667999|ref|YP_004450787.1| hypothetical protein Halhy_6092 [Haliscomenobacter hydrossis DSM 1100] gi|332336813|gb|AEE53914.1| hypothetical protein Halhy_6092 [Haliscomenobacter hydrossis DSM 1100] Length = 448 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 S AR+ F + I+++ FRGF +I F LT+ QNG GK+++ +A+ Sbjct: 6 SVEARQYRFLVDRIKLASFRGFQNEVEIHFEPDLTVFIAQNGGGKTTVLDAL 57 >gi|320095083|ref|ZP_08026792.1| hypothetical protein HMPREF9005_1404 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977950|gb|EFW09584.1| hypothetical protein HMPREF9005_1404 [Actinomyces sp. oral taxon 178 str. F0338] Length = 384 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL +E+ ++R F IEF + + V G N GKS+L +A+ + + Sbjct: 1 MKLTHVELQNWRNFA---HIEFDLNTRLFVVGPNASGKSNLLDALRF-ISDVANAGLYEA 56 Query: 86 SIKKRSI 92 SIKKR Sbjct: 57 SIKKRDS 63 >gi|295702784|ref|YP_003595859.1| nuclease SbcCD subunit C [Bacillus megaterium DSM 319] gi|294800443|gb|ADF37509.1| nuclease SbcCD, C subunit [Bacillus megaterium DSM 319] Length = 1130 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +S F E Q ++F + + + G G GKSS+ +AI YG +R Sbjct: 1 MKPINLTVSGLHSFREKQTVDFEALCSGGVFGIFGPTGSGKSSILDAITLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|294497410|ref|YP_003561110.1| nuclease SbcCD subunit C [Bacillus megaterium QM B1551] gi|294347347|gb|ADE67676.1| nuclease SbcCD, C subunit [Bacillus megaterium QM B1551] Length = 1130 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +S F E Q ++F + + + G G GKSS+ +AI YG +R Sbjct: 1 MKPINLTVSGLHSFREKQTVDFEALCSGGVFGIFGPTGSGKSSILDAITLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|262191178|ref|ZP_06049379.1| exonuclease SbcC [Vibrio cholerae CT 5369-93] gi|262032953|gb|EEY51490.1| exonuclease SbcC [Vibrio cholerae CT 5369-93] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|226365344|ref|YP_002783127.1| nuclease SbcCD subunit C [Rhodococcus opacus B4] gi|226243834|dbj|BAH54182.1| nuclease SbcCD subunit C [Rhodococcus opacus B4] Length = 993 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L +E+ F F +++F AD L +++G G GK+++ +A+ + YG Sbjct: 1 MRLHRLEVEAFGPFAGSVEVDFDRLGADGLFLLHGHTGAGKTTVLDAVAFALYGT 55 >gi|153830285|ref|ZP_01982952.1| putative exonuclease SbcC [Vibrio cholerae 623-39] gi|148874231|gb|EDL72366.1| putative exonuclease SbcC [Vibrio cholerae 623-39] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|153820499|ref|ZP_01973166.1| nuclease sbcCD subunit C [Vibrio cholerae NCTC 8457] gi|126508957|gb|EAZ71551.1| nuclease sbcCD subunit C [Vibrio cholerae NCTC 8457] Length = 235 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|254226510|ref|ZP_04920094.1| exonuclease SbcC, putative [Vibrio cholerae V51] gi|125620967|gb|EAZ49317.1| exonuclease SbcC, putative [Vibrio cholerae V51] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|15601281|ref|NP_232912.1| exonuclease SbcC, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121586467|ref|ZP_01676254.1| exonuclease SbcC, putative [Vibrio cholerae 2740-80] gi|121726202|ref|ZP_01679500.1| exonuclease SbcC, putative [Vibrio cholerae V52] gi|227812090|ref|YP_002812100.1| putative exonuclease SbcC [Vibrio cholerae M66-2] gi|229506307|ref|ZP_04395816.1| exonuclease SbcC [Vibrio cholerae BX 330286] gi|229509573|ref|ZP_04399055.1| exonuclease SbcC [Vibrio cholerae B33] gi|229516606|ref|ZP_04406053.1| exonuclease SbcC [Vibrio cholerae RC9] gi|229605858|ref|YP_002876562.1| exonuclease SbcC [Vibrio cholerae MJ-1236] gi|254849683|ref|ZP_05239033.1| nuclease sbcCD subunit C [Vibrio cholerae MO10] gi|255746701|ref|ZP_05420648.1| exonuclease SbcC [Vibrio cholera CIRS 101] gi|262151227|ref|ZP_06028364.1| exonuclease SbcC [Vibrio cholerae INDRE 91/1] gi|298499322|ref|ZP_07009128.1| nuclease sbcCD subunit C [Vibrio cholerae MAK 757] gi|17433250|sp|Q9KM67|SBCC_VIBCH RecName: Full=Nuclease sbcCD subunit C gi|9657926|gb|AAF96424.1| exonuclease SbcC, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549292|gb|EAX59323.1| exonuclease SbcC, putative [Vibrio cholerae 2740-80] gi|121631421|gb|EAX63793.1| exonuclease SbcC, putative [Vibrio cholerae V52] gi|227011232|gb|ACP07443.1| putative exonuclease SbcC [Vibrio cholerae M66-2] gi|229346487|gb|EEO11458.1| exonuclease SbcC [Vibrio cholerae RC9] gi|229353523|gb|EEO18461.1| exonuclease SbcC [Vibrio cholerae B33] gi|229356658|gb|EEO21576.1| exonuclease SbcC [Vibrio cholerae BX 330286] gi|229372344|gb|ACQ62766.1| exonuclease SbcC [Vibrio cholerae MJ-1236] gi|254845388|gb|EET23802.1| nuclease sbcCD subunit C [Vibrio cholerae MO10] gi|255736455|gb|EET91853.1| exonuclease SbcC [Vibrio cholera CIRS 101] gi|262030994|gb|EEY49621.1| exonuclease SbcC [Vibrio cholerae INDRE 91/1] gi|297541303|gb|EFH77354.1| nuclease sbcCD subunit C [Vibrio cholerae MAK 757] Length = 1013 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYAAPESL 76 >gi|282881996|ref|ZP_06290637.1| putative DNA repair exo subunit 2 [Peptoniphilus lacrimalis 315-B] gi|281298026|gb|EFA90481.1| putative DNA repair exo subunit 2 [Peptoniphilus lacrimalis 315-B] Length = 482 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + + +F+ + +EF L ++ G + GK+++ AI+W Y Q GD Sbjct: 1 MIYITKVHLENFQSH-KNTSLEFDRGLNVILGNSDSGKTAILRAIKWALYNEPQ----GD 55 Query: 86 SIKKRSIKT 94 + Sbjct: 56 YFIMQGQNQ 64 >gi|242805496|ref|XP_002484543.1| nuclear condensin complex subunit Smc4, putative [Talaromyces stipitatus ATCC 10500] gi|218715168|gb|EED14590.1| nuclear condensin complex subunit Smc4, putative [Talaromyces stipitatus ATCC 10500] Length = 1467 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 252 MVITHLVLTNFKSYAGKQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 310 >gi|167388840|ref|XP_001738713.1| structural maintenance of chromosomes protein [Entamoeba dispar SAW760] gi|165897907|gb|EDR24948.1| structural maintenance of chromosomes protein, putative [Entamoeba dispar SAW760] Length = 894 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F+ + + ++ F + T + G NG GKS++ + + ++F G ++ + Sbjct: 3 IEKMTFYNFKSYYDKVELGPFHESFTAIVGANGCGKSNVIDGLLFVF-GRRAKQIRQQKV 61 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 K+ + R L Sbjct: 62 VDLIHKSALHPNCTEARVDVHL 83 >gi|238814369|ref|NP_001154944.1| structural maintenance of chromosomes 3 [Nasonia vitripennis] Length = 1203 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|73666678|ref|YP_302694.1| recombination protein F [Ehrlichia canis str. Jake] gi|72393819|gb|AAZ68096.1| RecF protein [Ehrlichia canis str. Jake] Length = 372 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +FR ++ ++ ++ + ++ G+NG GK+++ EAI L G R + +S+ Sbjct: 8 YINNLRLVNFRNYSNLE-LDTSSKSVVLLGKNGAGKTNILEAISLLSKGTGIRGVNTESM 66 Query: 88 KKRSIKTPMPMCMAV 102 + + +P + + Sbjct: 67 QNSTSDSPWSLSYQI 81 >gi|67478732|ref|XP_654748.1| SMC4 protein [Entamoeba histolytica HM-1:IMSS] gi|56471819|gb|EAL49361.1| SMC4 protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1226 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F+ + + ++ F + T + G NG GKS++ + + ++F G ++ + Sbjct: 12 IEKMTFYNFKSYYDKVELGPFHESFTAIVGANGCGKSNVIDGLLFVF-GRRAKQIRQQKV 70 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 K+ + R L Sbjct: 71 ADLIHKSALHPNCTEARVDVHL 92 >gi|320168353|gb|EFW45252.1| zinc ion binding protein [Capsaspora owczarzaki ATCC 30864] Length = 1396 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + I F LT++ G NG GK+++ E + ++ G Sbjct: 4 IERLSIQGIRSFSSNDACDIRFQTPLTVIVGHNGAGKTTIIECLRYVTTG 53 >gi|225464350|ref|XP_002273318.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1204 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ + V G NG GK++ AI ++ Sbjct: 1 MYIKQVIIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVL 49 >gi|118587496|ref|ZP_01544921.1| DNA repair protein RecF [Oenococcus oeni ATCC BAA-1163] gi|118432146|gb|EAV38887.1| DNA repair protein RecF [Oenococcus oeni ATCC BAA-1163] Length = 373 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + +Q ++F++ + ++ G N GK++L EAI L + R + Sbjct: 1 MFLNSLKLKDFRNYKSLQ-VDFSNSINVLIGDNAQGKTNLLEAIYILSMARSHRDNNDRD 59 Query: 87 IKKRSIK 93 + S Sbjct: 60 LINWSSD 66 >gi|116490130|ref|YP_809653.1| DNA replication and repair protein RecF [Oenococcus oeni PSU-1] gi|290889524|ref|ZP_06552614.1| hypothetical protein AWRIB429_0004 [Oenococcus oeni AWRIB429] gi|122277679|sp|Q04HR3|RECF_OENOB RecName: Full=DNA replication and repair protein recF gi|116090855|gb|ABJ56009.1| DNA replication and repair protein RecF [Oenococcus oeni PSU-1] gi|290480722|gb|EFD89356.1| hypothetical protein AWRIB429_0004 [Oenococcus oeni AWRIB429] Length = 373 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + +Q ++F++ + ++ G N GK++L EAI L + R + Sbjct: 1 MFLNSLKLKDFRNYKSLQ-VDFSNSINVLIGDNAQGKTNLLEAIYILSMARSHRDNNDRD 59 Query: 87 IKKRSIK 93 + S Sbjct: 60 LINWSSD 66 >gi|315052242|ref|XP_003175495.1| chromosomes protein 2 structural maintenance [Arthroderma gypseum CBS 118893] gi|311340810|gb|EFR00013.1| chromosomes protein 2 structural maintenance [Arthroderma gypseum CBS 118893] Length = 1179 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|187931536|ref|YP_001891520.1| RecFOR complex, RecF component [Francisella tularensis subsp. mediasiatica FSC147] gi|259563658|sp|B2SG84|RECF_FRATM RecName: Full=DNA replication and repair protein recF gi|187712445|gb|ACD30742.1| RecFOR complex, RecF component [Francisella tularensis subsp. mediasiatica FSC147] Length = 349 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYISNLRLQNFRNIHAK-SFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|327404856|ref|YP_004345694.1| DNA replication and repair protein recF [Fluviicola taffensis DSM 16823] gi|327320364|gb|AEA44856.1| DNA replication and repair protein recF [Fluviicola taffensis DSM 16823] Length = 364 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + + +FR +E + +F + + G+NG GK+++ +A+ +L Sbjct: 1 MFVESLSLVNFRNHSEAE-FQFEAGVNCIVGKNGSGKTNVLDAVHYL 46 >gi|259502127|ref|ZP_05745029.1| recombination protein F [Lactobacillus antri DSM 16041] gi|259169940|gb|EEW54435.1| recombination protein F [Lactobacillus antri DSM 16041] Length = 373 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + HFR + E Q + FA + ++ G N GK+++ EAI L + R + + Sbjct: 3 LSELHLHHFRNY-EDQTVHFAPGVNVLIGHNAQGKTNMLEAIYALSLTRSHRTTNDRELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWREKS 67 >gi|256424433|ref|YP_003125086.1| DNA replication and repair protein RecF [Chitinophaga pinensis DSM 2588] gi|256039341|gb|ACU62885.1| DNA replication and repair protein RecF [Chitinophaga pinensis DSM 2588] Length = 360 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + L I + F+ ++ F + + G+NG GK++L +AI ++ + + Sbjct: 1 MLSLKKISLVQFKNYSGK-SFSFHKRIVGITGRNGSGKTNLLDAIYYICFTKS 52 >gi|150390368|ref|YP_001320417.1| hypothetical protein Amet_2606 [Alkaliphilus metalliredigens QYMF] gi|149950230|gb|ABR48758.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 650 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F L ++I +F+G E Q IEF T + G+N GK+++ +A WL + + + Sbjct: 3 FILEKLKIRNFKGIRE-QDIEFNPISTTICGENATGKTTVVDAFTWLLFEKDSKGRSQFE 61 Query: 87 IK 88 IK Sbjct: 62 IK 63 >gi|288920292|ref|ZP_06414605.1| OLD family toprim nucleotidyl transferase/hydrolase domain protein [Frankia sp. EUN1f] gi|288348316|gb|EFC82580.1| OLD family toprim nucleotidyl transferase/hydrolase domain protein [Frankia sp. EUN1f] Length = 641 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + + +FR + + F LT++ G+N GKS++ +A+ Sbjct: 1 MYLAEFTLKNFRSCRD-TTVTFQRGLTLIVGENNSGKSNIIDALR 44 >gi|222099796|ref|YP_002534364.1| DNA double-strand break repair rad50 ATPase [Thermotoga neapolitana DSM 4359] gi|221572186|gb|ACM22998.1| DNA double-strand break repair rad50 ATPase [Thermotoga neapolitana DSM 4359] Length = 853 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +F G I F +TI+ G NG GKSS+ EAI + +G R Sbjct: 1 MRPERLVAKNFLGLKS-VDINFEKGITIIEGPNGAGKSSIFEAISFALFGEGIRYGR 56 >gi|167629671|ref|YP_001680170.1| exonuclease sbcc, putative [Heliobacterium modesticaldum Ice1] gi|167592411|gb|ABZ84159.1| exonuclease sbcc, putative [Heliobacterium modesticaldum Ice1] Length = 1023 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F +Q I+F L +++G G GK+++ +AI + YG T + Sbjct: 1 MKPLKLTMQAFGPFAGVQVIDFNELGGQSLFLIHGPTGAGKTTILDAITFALYGDTSGGE 60 Query: 83 HGDSIKKRSIKTPM 96 + +P Sbjct: 61 REGRQMRSHHASPK 74 >gi|148927260|ref|ZP_01810831.1| DNA recombination/replication protein RecF [candidate division TM7 genomosp. GTL1] gi|147887346|gb|EDK72799.1| DNA recombination/replication protein RecF [candidate division TM7 genomosp. GTL1] Length = 107 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + FR + + + + +TI++G NG GK++L EA+ L G + R Sbjct: 4 SLRLQQFRSYKDK-SVTLSPAVTIISGPNGSGKTNLLEALYVLARGTSFR 52 >gi|300789864|ref|YP_003770155.1| exonuclease SbcC [Amycolatopsis mediterranei U32] gi|299799378|gb|ADJ49753.1| exonuclease SbcC [Amycolatopsis mediterranei U32] Length = 983 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 +L +E+ F + + ++F AD L +++G+ G GK++L +AI + +G Sbjct: 1 MRLHRLEVEAFGPYCAREVVDFDVLGADGLFLLHGETGAGKTTLLDAIAFALFGVVPGAR 60 Query: 77 YTQRRKHGDSIKKRSIKTPMPMCMAV 102 +R D ++ + T + + + V Sbjct: 61 NEAKRLRCDLAERDQV-TEVALELTV 85 >gi|254498005|ref|ZP_05110768.1| putative SMC domain protein [Legionella drancourtii LLAP12] gi|254352782|gb|EET11554.1| putative SMC domain protein [Legionella drancourtii LLAP12] Length = 816 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHG 84 + ++ I I + RG + ++ G NG GKS + +AIE+ G R G Sbjct: 1 MIRIESITIENLRGIKRLHH-NLGHGNLVIQGPNGSGKSGIIDAIEFALTGNISRLSGTG 59 Query: 85 DSIKKRSIKTP 95 S SI P Sbjct: 60 SSGVTLSIHAP 70 >gi|257054093|ref|YP_003131925.1| recombination protein F [Saccharomonospora viridis DSM 43017] gi|256583965|gb|ACU95098.1| DNA replication and repair protein RecF [Saccharomonospora viridis DSM 43017] Length = 390 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + E + A T++ G NG GK++L EAI ++ + R Sbjct: 1 MYLRHLQVTDFRSW-EHVDLPLAQGPTVLVGPNGQGKTNLLEAIGYISTLSSHRVATDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRHGCD 66 >gi|327438159|dbj|BAK14524.1| recombinational DNA repair ATPase [Solibacillus silvestris StLB046] Length = 372 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++++R + E ++F+D + + G+N GK+++ E+I L + R + Sbjct: 1 MNIERLQLTNYRNY-ESLTLDFSDKINVFIGENAQGKTNVMESIYVLAMAKSHRTANDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|206895293|ref|YP_002246874.1| probable DNA double-strand break repair Rad50 ATPase, putative [Coprothermobacter proteolyticus DSM 5265] gi|206737910|gb|ACI16988.1| probable DNA double-strand break repair Rad50 ATPase, putative [Coprothermobacter proteolyticus DSM 5265] Length = 972 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K +E+++F G + +EF + + ++ G NG GKSS+ EA+ + YG T R Sbjct: 1 MKPKKLEVTNFLGL-KNLSLEFPEQGVFVITGPNGSGKSSILEAMYFALYGKTMR 54 >gi|146077792|ref|XP_001463342.1| structural maintenance of chromosome 3 protein [Leishmania infantum JPCM5] gi|134067427|emb|CAM65700.1| putative adaptor complex protein (AP) 3 delta subunit 1 [Leishmania infantum JPCM5] Length = 1198 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL----TIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + E F D L ++ G+NG GKS+ AI+++ Sbjct: 1 MFIKNIIISGFRSYREQS---FPDGLSPKTNVIVGKNGSGKSNFFAAIQFVLNE 51 >gi|86152093|ref|ZP_01070305.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni 260.94] gi|85840878|gb|EAQ58128.1| predicted ATP-dependent endonuclease of the OLD family [Campylobacter jejuni subsp. jejuni 260.94] Length = 168 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K++ ++I +FR + ++F D LT G+N GKS++ EA++ F G + D Sbjct: 1 MKIIQVKIKNFRSYVNEVIVDFED-LTAFVGKNDIGKSTILEALDIFFDGGVIKIDKNDI 59 Query: 87 IKKR 90 K+ Sbjct: 60 NKEC 63 >gi|332705175|ref|ZP_08425257.1| exonuclease SbcC [Lyngbya majuscula 3L] gi|332356125|gb|EGJ35583.1| exonuclease SbcC [Lyngbya majuscula 3L] Length = 1006 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 14/79 (17%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT----------- 78 + + +F + + ++F H + GQNG GKSSL EAI W +G + Sbjct: 5 QLTLKNFLSYRDAT-LDFRGLHTACICGQNGAGKSSLLEAITWAIWGQSRVASENDIIHT 63 Query: 79 -QRRKHGDSIKKRSIKTPM 96 + D I + + +T Sbjct: 64 GAKEVRVDFIFQNNQQTHR 82 >gi|313625797|gb|EFR95414.1| DNA replication and repair protein RecF [Listeria innocua FSL J1-023] Length = 370 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|313621667|gb|EFR92455.1| DNA replication and repair protein RecF [Listeria innocua FSL S4-378] Length = 152 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|308177078|ref|YP_003916484.1| nuclease SbcCD subunit C [Arthrobacter arilaitensis Re117] gi|307744541|emb|CBT75513.1| putative nuclease SbcCD subunit C [Arthrobacter arilaitensis Re117] Length = 1023 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ ++I F F ++I F + L +++G G GKSS+ +AI + YG + Sbjct: 1 MRIHKLQIQAFGPFAGTEEINFDELAEGGLFLLDGPTGAGKSSILDAICYALYGALPGSR 60 Query: 83 HGDSIKKR 90 G + Sbjct: 61 TGSRQIRS 68 >gi|307243415|ref|ZP_07525572.1| putative recombination protein F [Peptostreptococcus stomatis DSM 17678] gi|306493225|gb|EFM65221.1| putative recombination protein F [Peptostreptococcus stomatis DSM 17678] Length = 371 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + ++ +EF + ++ G NG GK++L EAI ++ G + R Sbjct: 1 MYINSLKLVNYRNYDDLL-VEFNKKVNLIIGMNGQGKTNLVEAIGFMSIGRSFRTNKDRE 59 Query: 87 IKKRSIK 93 + K S + Sbjct: 60 LIKFSAE 66 >gi|311113650|ref|YP_003984872.1| ATP-dependent OLD family endonuclease [Rothia dentocariosa ATCC 17931] gi|310945144|gb|ADP41438.1| ATP-dependent OLD family endonuclease [Rothia dentocariosa ATCC 17931] Length = 682 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ +EI +FR + I+F ++LT G NG GKSS+ A++W F Sbjct: 5 MRIKTVEIKNFRLLKD-VSIDF-NNLTSFIGPNGSGKSSILYALDWFF 50 >gi|289433378|ref|YP_003463250.1| DNA replication and repair protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169622|emb|CBH26156.1| DNA replication and repair protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 370 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|238880690|gb|EEQ44328.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1198 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVL 49 >gi|258652146|ref|YP_003201302.1| DNA repair exonuclease, SbcC [Nakamurella multipartita DSM 44233] gi|258555371|gb|ACV78313.1| DNA repair exonuclease, SbcC [Nakamurella multipartita DSM 44233] Length = 995 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 +L ++E+S F F + ++ AD L +++G G GK+SL +A+ + +G Sbjct: 1 MRLHELELSAFGPFAGTETVDLDAVSADGLFLIHGDTGAGKTSLLDAVAYALFGRVPGPR 60 Query: 77 YTQRRKHGD 85 RR D Sbjct: 61 NEARRLRCD 69 >gi|116871427|ref|YP_848208.1| recombination protein F [Listeria welshimeri serovar 6b str. SLCC5334] gi|123460552|sp|A0AEJ1|RECF_LISW6 RecName: Full=DNA replication and repair protein recF gi|116740305|emb|CAK19423.1| DNA replication and repair protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 370 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|91779831|ref|YP_555039.1| hypothetical protein Bxe_B0257 [Burkholderia xenovorans LB400] gi|91692491|gb|ABE35689.1| conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 159 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR ++ I F D +T G NG GKS++ A++W F G Sbjct: 1 MKIHTVRIKNFRTLKDVT-IPF-DTITTFIGPNGAGKSTVLRALDWYFNG 48 >gi|50311811|ref|XP_455936.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645072|emb|CAG98644.1| KLLA0F19085p [Kluyveromyces lactis] Length = 1372 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + IQ+I F + V G NG GKS++ +++ ++F + + G Sbjct: 125 IDKLVLNNFKSYAGIQEIGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQG 181 >gi|16799084|ref|NP_469352.1| recombination protein F [Listeria innocua Clip11262] gi|20978613|sp|Q92FU8|RECF_LISIN RecName: Full=DNA replication and repair protein recF gi|16412426|emb|CAC95238.1| RecF protein [Listeria innocua Clip11262] Length = 370 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|326482222|gb|EGE06232.1| nuclear condensin complex subunit smc2 [Trichophyton equinum CBS 127.97] Length = 1179 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|322827600|gb|EFZ31711.1| structural maintenance of chromosome 3 protein, putative [Trypanosoma cruzi] Length = 959 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + + +++ + ++ G+NG GKS+ A++++ Sbjct: 1 MHIKNILISGFRSYRDQSFQVDLSPKNNVIVGKNGSGKSNFFAAVQFVLSE 51 >gi|300814427|ref|ZP_07094695.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511461|gb|EFK38693.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 403 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + + +F+ + +EF L ++ G + GK+++ AI+W Y Q GD Sbjct: 1 MIYITKVHLENFQSH-KNTSLEFDRGLNVILGNSDSGKTAILRAIKWALYNEPQ----GD 55 Query: 86 SIKKRSIKT 94 + Sbjct: 56 YFIMQGQNQ 64 >gi|240274260|gb|EER37777.1| nuclear condensin complex subunit Smc4 [Ajellomyces capsulatus H143] Length = 1328 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 237 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 296 Query: 81 RKHG 84 + G Sbjct: 297 MRQG 300 >gi|225554883|gb|EEH03177.1| condensin subunit [Ajellomyces capsulatus G186AR] Length = 1447 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 237 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 296 Query: 81 RKHG 84 + G Sbjct: 297 MRQG 300 >gi|154270600|ref|XP_001536154.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150409728|gb|EDN05168.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1447 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 237 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 296 Query: 81 RKHG 84 + G Sbjct: 297 MRQG 300 >gi|33239523|ref|NP_874465.1| chromosome segregation ATPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237048|gb|AAP99117.1| Chromosome segregation ATPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 1184 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I + T+V G NG GKS++ + + + T R + + Sbjct: 2 TIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAERLPDL 47 >gi|326475144|gb|EGD99153.1| nuclear condensin complex subunit Smc2 [Trichophyton tonsurans CBS 112818] Length = 1179 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|260943746|ref|XP_002616171.1| hypothetical protein CLUG_03412 [Clavispora lusitaniae ATCC 42720] gi|238849820|gb|EEQ39284.1| hypothetical protein CLUG_03412 [Clavispora lusitaniae ATCC 42720] Length = 1419 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + +Q+I F + V G NG GKS++ +++ ++F + + G Sbjct: 196 INRLVLTNFKSYAGVQEIGPFNASFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 252 >gi|295668451|ref|XP_002794774.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285467|gb|EEH41033.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1449 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 244 MVITHLVMTNFKSYAGRQIVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 302 >gi|255283817|ref|ZP_05348372.1| RecF protein [Bryantella formatexigens DSM 14469] gi|255265700|gb|EET58905.1| RecF protein [Bryantella formatexigens DSM 14469] Length = 360 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ FR + + K++F I G N GK+++ EA+ + R + Sbjct: 3 VQSIELEKFRNYKSL-KLKFDSGTNIFYGDNAQGKTNILEAVYLCGTTKSHRGSKDREVI 61 Query: 89 KRSIKTPMPMCMAVPR 104 + + + M V R Sbjct: 62 -QFQEEESHLRMKVER 76 >gi|45201184|ref|NP_986754.1| AGR089Cp [Ashbya gossypii ATCC 10895] gi|44985967|gb|AAS54578.1| AGR089Cp [Ashbya gossypii ATCC 10895] Length = 1370 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + Q + F + V G NG GKS++ +++ + F G+ + + Sbjct: 108 IRTLVLENFKSYAGRQVVGPFHSSFSAVVGPNGSGKSNVIDSMLFAF-GFRANKMRQGKL 166 Query: 88 KKRSIKTPM 96 K+ Sbjct: 167 SHLIHKSEK 175 >gi|71406330|ref|XP_805714.1| structural maintenance of chromosome 3 [Trypanosoma cruzi strain CL Brener] gi|70869223|gb|EAN83863.1| structural maintenance of chromosome 3, putative [Trypanosoma cruzi] Length = 220 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + + +++ + ++ G+NG GKS+ A++++ Sbjct: 1 MHIKNILISGFRSYRDQSFQVDLSPKNNVIVGKNGSGKSNFFAAVQFVLSE 51 >gi|322496775|emb|CBZ31845.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1198 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL----TIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + E F D L ++ G+NG GKS+ AI+++ Sbjct: 1 MFIKNIIISGFRSYREQS---FPDGLSPKTNVIVGKNGSGKSNFFAAIQFVLNE 51 >gi|221481578|gb|EEE19960.1| structural maintenance of chromosome protein, putative [Toxoplasma gondii GT1] Length = 1200 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ ++ + V G NG GKS++ ++I ++ Sbjct: 1 MYIEAIVLEGFKSYSNRVYVGPLHPQFNAVTGLNGTGKSNILDSICFVLGITNHALVRAT 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 KLDDLVYKQ 69 >gi|242213363|ref|XP_002472510.1| predicted protein [Postia placenta Mad-698-R] gi|220728401|gb|EED82296.1| predicted protein [Postia placenta Mad-698-R] Length = 1254 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + R F + Q IEF +T++ G NG GK+++ E +++ G G Sbjct: 4 IDKLAVRGIRSFDDKQISVIEFFTPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTRG 61 >gi|156102837|ref|XP_001617111.1| structural maintenance of chromosome 2 [Plasmodium vivax SaI-1] gi|148805985|gb|EDL47384.1| structural maintenance of chromosome 2, putative [Plasmodium vivax] Length = 1218 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|68066462|ref|XP_675214.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494268|emb|CAH99081.1| hypothetical protein PB001653.02.0 [Plasmodium berghei] Length = 398 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|71652812|ref|XP_815055.1| structural maintenance of chromosome 3 protein [Trypanosoma cruzi strain CL Brener] gi|70880081|gb|EAN93204.1| structural maintenance of chromosome 3 protein, putative [Trypanosoma cruzi] Length = 1200 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + + +++ + ++ G+NG GKS+ A++++ Sbjct: 1 MHIKNILISGFRSYRDQSFQVDLSPKNNVIVGKNGSGKSNFFAAVQFVLSE 51 >gi|68471573|ref|XP_720093.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] gi|46441945|gb|EAL01238.1| potential nuclear cohesin complex SMC ATPase [Candida albicans SC5314] Length = 1240 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVL 49 >gi|325091665|gb|EGC44975.1| condensin subunit [Ajellomyces capsulatus H88] Length = 1447 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 237 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 296 Query: 81 RKHG 84 + G Sbjct: 297 MRQG 300 >gi|315181603|gb|ADT88516.1| exonuclease SbcC, hypothetical [Vibrio furnissii NCTC 11218] Length = 1013 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F F + ++F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPIKLTLQGFGPFASQEVVDFTQLGHAPLFLINGPTGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|260770517|ref|ZP_05879450.1| exonuclease SbcC [Vibrio furnissii CIP 102972] gi|260615855|gb|EEX41041.1| exonuclease SbcC [Vibrio furnissii CIP 102972] Length = 1013 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F F + ++F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPIKLTLQGFGPFASQEVVDFTQLGHAPLFLINGPTGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|261195865|ref|XP_002624336.1| nuclear condensin complex subunit Smc4 [Ajellomyces dermatitidis SLH14081] gi|239587469|gb|EEQ70112.1| nuclear condensin complex subunit Smc4 [Ajellomyces dermatitidis SLH14081] gi|239614421|gb|EEQ91408.1| nuclear condensin complex subunit Smc4 [Ajellomyces dermatitidis ER-3] Length = 1446 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 A K + + +++F+ + Q + F + V G NG GKS++ +++ ++F + Sbjct: 236 APKPRMVITHLVMTNFKSYAGRQVVGPFHVSFSSVVGPNGSGKSNVIDSLLFVFGFRASK 295 Query: 81 RKHG 84 + G Sbjct: 296 MRQG 299 >gi|296817741|ref|XP_002849207.1| structural maintenance of chromosomes protein 2 [Arthroderma otae CBS 113480] gi|238839660|gb|EEQ29322.1| structural maintenance of chromosomes protein 2 [Arthroderma otae CBS 113480] Length = 1179 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|256389236|ref|YP_003110800.1| DNA replication and repair protein RecF [Catenulispora acidiphila DSM 44928] gi|256355462|gb|ACU68959.1| DNA replication and repair protein RecF [Catenulispora acidiphila DSM 44928] Length = 381 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + ++ FR + + + +T G NG GK++L EAI ++ + R Sbjct: 1 MRVTHLSLADFRSYASLD-VALGGGVTAFVGPNGQGKTNLVEAIGYIATLDSHRVATDQP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRFG 64 >gi|221504653|gb|EEE30326.1| SMC protein, putative [Toxoplasma gondii VEG] Length = 1200 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ ++ + V G NG GKS++ ++I ++ Sbjct: 1 MYIEAIVLEGFKSYSNRVYVGPLHPQFNAVTGLNGTGKSNILDSICFVLGITNHALVRAT 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 KLDDLVYKQ 69 >gi|237843805|ref|XP_002371200.1| structural maintenance of chromosomes protein, putative [Toxoplasma gondii ME49] gi|211968864|gb|EEB04060.1| structural maintenance of chromosomes protein, putative [Toxoplasma gondii ME49] Length = 1217 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ ++ + V G NG GKS++ ++I ++ Sbjct: 1 MYIEAIVLEGFKSYSNRVYVGPLHPQFNAVTGLNGTGKSNILDSICFVLGITNHALVRAT 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 KLDDLVYKQ 69 >gi|304392439|ref|ZP_07374380.1| DNA replication and repair protein RecF [Ahrensia sp. R2A130] gi|303295543|gb|EFL89902.1| DNA replication and repair protein RecF [Ahrensia sp. R2A130] Length = 391 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++S+ A + + +++ HFR + + ++ ++ G+NG GK++L EAI +L G Sbjct: 1 MSSFLAAEKGVAITTLKLDHFRNY-DTLRLLCDHRHVVLTGENGSGKTNLLEAISFLSPG 59 Query: 77 YTQRRKHGDSI-KKRSIKTPMPMCMAV 102 RR D + K +P AV Sbjct: 60 RGLRRTSYDQVAKADGSDSPRSGTWAV 86 >gi|241204311|ref|YP_002975407.1| SMC domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858201|gb|ACS55868.1| SMC domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 818 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++ I I FRG E+ + G NG GKS + +AIE++ G R Sbjct: 1 MIRIDKIHIKEFRGIRELTLTLKGQNFAA-CGPNGTGKSGIVDAIEFVLTGNISR 54 >gi|298246203|ref|ZP_06970009.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] gi|297553684|gb|EFH87549.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] Length = 1048 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + IE+ + + + ++F T ++G+NG GK++L EAI + + Sbjct: 1 MLITRIELENIKSYRHF-SVDFRRGTTAISGENGAGKTTLVEAIGFALFDS 50 >gi|90420504|ref|ZP_01228411.1| DNA replication and repair protein recF [Aurantimonas manganoxydans SI85-9A1] gi|90335232|gb|EAS48985.1| DNA replication and repair protein recF [Aurantimonas manganoxydans SI85-9A1] Length = 407 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ ++ FR + E + F + G NG GK++L EAI L G RR Sbjct: 21 VRLDELRLADFRNY-ETLSLRFTRGFVVFVGDNGAGKTNLLEAISLLTPGRGLRRAPYQD 79 Query: 87 IKKRS 91 + ++ Sbjct: 80 VARKG 84 >gi|15922434|ref|NP_378103.1| purine NTPase [Sulfolobus tokodaii str. 7] gi|15623223|dbj|BAB67212.1| 882aa long hypothetical purine NTPase [Sulfolobus tokodaii str. 7] Length = 882 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RK 82 L + I+I +F + IEF + ++ G NG GKSS+ +AI + + + R +K Sbjct: 2 LKMIIRRIDIENFLSH-DRSLIEFKGTVNVIIGHNGAGKSSIIDAISFSLFRKSLRDAKK 60 Query: 83 HGDSIKK 89 D IK+ Sbjct: 61 QEDLIKR 67 >gi|322488787|emb|CBZ24034.1| adaptor complex protein (AP) 3 delta subunit 1,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1198 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL----TIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + E F D L ++ G+NG GKS+ AI+++ Sbjct: 1 MFIKNIIISGFRSYREQS---FPDGLSPKTNVIVGKNGSGKSNFFAAIQFVLNE 51 >gi|297584271|ref|YP_003700051.1| SMC domain-containing protein [Bacillus selenitireducens MLS10] gi|297142728|gb|ADH99485.1| SMC domain protein [Bacillus selenitireducens MLS10] Length = 1121 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K +++ + F E Q I+F + L + G G GKS++ +AI YG +R Sbjct: 1 MKPIELSLKGIHSFKETQTIDFEELTEAGLFGIFGPTGAGKSTILDAITLALYGKVER 58 >gi|329846729|ref|ZP_08262002.1| recF/RecN/SMC N terminal domain protein [Asticcacaulis biprosthecum C19] gi|328844236|gb|EGF93804.1| recF/RecN/SMC N terminal domain protein [Asticcacaulis biprosthecum C19] Length = 1057 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I++ FR F ++ + A + IV+G NG GKSSL + +EW G Sbjct: 31 IYISQIQLKEFRNFGDLTIDLPAAPGVMIVHGTNGLGKSSLFDGLEWALTG 81 >gi|82705825|ref|XP_727129.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23482825|gb|EAA18694.1| SMC domain N terminal domain, putative [Plasmodium yoelii yoelii] Length = 398 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 4/99 (4%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 ++ S+ S +L F + + + +F+ + I T + G NG GKS++ + I + Sbjct: 188 MTSSMISSKESELCF-IKYLTVCNFKSYENENIIGPFSKFTAIIGPNGSGKSNIMDCICF 246 Query: 73 LFYGYTQRRKHGDSIKKRSI--KTPMPMCMAVPRCKYQL 109 + G + +++K + ++ +C +L Sbjct: 247 VL-GIDNKYLRIKNLRKLIYHKENEKMENISKKKCYVKL 284 >gi|312134983|ref|YP_004002321.1| SMC domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775034|gb|ADQ04521.1| SMC domain protein [Caldicellulosiruptor owensensis OL] Length = 857 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + + +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLFLRVENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|307331910|ref|ZP_07611006.1| DNA replication and repair protein RecF [Streptomyces violaceusniger Tu 4113] gi|306882428|gb|EFN13518.1| DNA replication and repair protein RecF [Streptomyces violaceusniger Tu 4113] Length = 380 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR +T ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYT-RAEVALDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|325114640|emb|CBZ50196.1| smc2 protein, related [Neospora caninum Liverpool] Length = 826 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + F+ ++ + V G NG GKS++ ++I ++ Sbjct: 1 MYIEAIVLEGFKSYSNRVYVGPLHPQFNAVTGLNGTGKSNILDSICFVLGITNHALVRAT 60 Query: 86 SIKKRSIKT 94 + K Sbjct: 61 KLDDLVYKQ 69 >gi|296453190|ref|YP_003660333.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum JDM301] gi|296182621|gb|ADG99502.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum JDM301] Length = 412 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|293189449|ref|ZP_06608169.1| putative ATP-dependent dsDNA exonuclease SbcC [Actinomyces odontolyticus F0309] gi|292821539|gb|EFF80478.1| putative ATP-dependent dsDNA exonuclease SbcC [Actinomyces odontolyticus F0309] Length = 1024 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ + I F ++F+ L +++G G GKS+L +AI + YG R K Sbjct: 1 MKIRWLRIVGIGPFAGEHTVDFSAFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVARTK 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DASKDRLRS 69 >gi|291517731|emb|CBK71347.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. longum F8] Length = 412 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|239622840|ref|ZP_04665871.1| recombination protein RecF [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514837|gb|EEQ54704.1| recombination protein RecF [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 412 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|291455695|ref|ZP_06595085.1| RecF protein [Bifidobacterium breve DSM 20213] gi|291382623|gb|EFE90141.1| RecF protein [Bifidobacterium breve DSM 20213] Length = 385 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILVGKNGLGKTNLVEAVEVLSTGASHRASSMLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|213690932|ref|YP_002321518.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790465|sp|B7GSG2|RECF_BIFLI RecName: Full=DNA replication and repair protein recF gi|213522393|gb|ACJ51140.1| DNA replication and repair protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320456978|dbj|BAJ67599.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 412 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|68471834|ref|XP_719960.1| potential nuclear cohesin complex SMC ATPase fragment [Candida albicans SC5314] gi|46441807|gb|EAL01101.1| potential nuclear cohesin complex SMC ATPase fragment [Candida albicans SC5314] Length = 1026 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVL 49 >gi|23335941|ref|ZP_00121172.1| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Bifidobacterium longum DJO10A] gi|227547509|ref|ZP_03977558.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312133630|ref|YP_004000969.1| recf [Bifidobacterium longum subsp. longum BBMN68] gi|322688194|ref|YP_004207928.1| recombination protein RecF [Bifidobacterium longum subsp. infantis 157F] gi|227212024|gb|EEI79920.1| recombination protein RecF [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311772888|gb|ADQ02376.1| RecF [Bifidobacterium longum subsp. longum BBMN68] gi|320459530|dbj|BAJ70150.1| recombination protein RecF [Bifidobacterium longum subsp. infantis 157F] Length = 412 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|332654822|ref|ZP_08420564.1| DNA replication and repair protein RecF [Ruminococcaceae bacterium D16] gi|332516165|gb|EGJ45773.1| DNA replication and repair protein RecF [Ruminococcaceae bacterium D16] Length = 372 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL +E+ FR + ++ F + ++ G N GK++L EAI +L + R ++ Sbjct: 1 MKLNRLELDFFRNYAHVEA-TFHPRVNLIYGDNAQGKTNLLEAIAYLSSARSHRARYD 57 >gi|254412964|ref|ZP_05026736.1| hypothetical protein MC7420_2124 [Microcoleus chthonoplastes PCC 7420] gi|196180128|gb|EDX75120.1| hypothetical protein MC7420_2124 [Microcoleus chthonoplastes PCC 7420] Length = 688 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQ---KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I + +FR F + D + T+++G NG GK++L W+ Y Sbjct: 1 MKLRSIRLCNFRQFYGKTPEITLATGDRNTTVIHGNNGAGKTTLLNGFTWVLYE 54 >gi|195488694|ref|XP_002092422.1| GE14184 [Drosophila yakuba] gi|194178523|gb|EDW92134.1| GE14184 [Drosophila yakuba] Length = 1303 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYAEDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|221061023|ref|XP_002262081.1| chromosome segregation protein [Plasmodium knowlesi strain H] gi|193811231|emb|CAQ41959.1| chromosome segregation protein, putative [Plasmodium knowlesi strain H] Length = 1217 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|118497329|ref|YP_898379.1| RecFOR complex, RecF component [Francisella tularensis subsp. novicida U112] gi|195536015|ref|ZP_03079022.1| RecF/RecN/SMC N domain protein, putative [Francisella tularensis subsp. novicida FTE] gi|208779116|ref|ZP_03246462.1| RecF/RecN/SMC N domain protein, putative [Francisella novicida FTG] gi|254372694|ref|ZP_04988183.1| RecFOR complex [Francisella tularensis subsp. novicida GA99-3549] gi|254374152|ref|ZP_04989634.1| DNA replication and repair protein recF [Francisella novicida GA99-3548] gi|259563659|sp|A0Q5W0|RECF_FRATN RecName: Full=DNA replication and repair protein recF gi|118423235|gb|ABK89625.1| RecFOR complex, RecF component [Francisella novicida U112] gi|151570421|gb|EDN36075.1| RecFOR complex [Francisella novicida GA99-3549] gi|151571872|gb|EDN37526.1| DNA replication and repair protein recF [Francisella novicida GA99-3548] gi|194372492|gb|EDX27203.1| RecF/RecN/SMC N domain protein, putative [Francisella tularensis subsp. novicida FTE] gi|208744916|gb|EDZ91214.1| RecF/RecN/SMC N domain protein, putative [Francisella novicida FTG] Length = 349 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYISNLRLQNFRNIPAK-SFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|15078763|ref|NP_149513.1| 050L [Invertebrate iridescent virus 6] gi|82061651|sp|Q91G49|VF050_IIV6 RecName: Full=Uncharacterized protein 050L gi|15042203|gb|AAK81983.1|AF303741_50 050L [Invertebrate iridescent virus 6] Length = 1052 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++++++ +F+ F E + F D + +++ +G GK+S+ AI++ +G + G+ + Sbjct: 1 MIELKLKNFKCF-ENKTFNFKDEMVLISAPSGSGKTSILSAIKFALWGSGKTLTKGEIM 58 >gi|268324286|emb|CBH37874.1| hypothetical protein, containing RecF/RecN/SMC N terminal domain [uncultured archaeon] Length = 641 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGD 85 L +I + +F + E +I L +++G NG GKSS+ AI YT+R + Sbjct: 11 IWLKEIILENFMSY-EYARIPLKRGLNLISGPNGAGKSSILLAISVALGQIYTERSRRLR 69 Query: 86 SIKKRSIK 93 + +R + Sbjct: 70 DLIRRGKE 77 >gi|229816228|ref|ZP_04446538.1| hypothetical protein COLINT_03278 [Collinsella intestinalis DSM 13280] gi|229808236|gb|EEP44028.1| hypothetical protein COLINT_03278 [Collinsella intestinalis DSM 13280] Length = 360 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ + H+R F + KIE +T+ G+N GK++L EA++ L G + R+ + + Sbjct: 6 TELSVLHYRSFDDR-KIELDPGITVFVGRNAVGKTNLVEALQLLTAGASFRKPTASELLR 64 Query: 90 RS 91 Sbjct: 65 DG 66 >gi|254387093|ref|ZP_05002367.1| recombination protein F [Streptomyces sp. Mg1] gi|194345912|gb|EDX26878.1| recombination protein F [Streptomyces sp. Mg1] Length = 378 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EAI +L + R Sbjct: 1 MHVSHLSLADFRSYA-RAEVPLDPGVTAFVGPNGQGKTNLVEAIGYLAVLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRMGAD 66 >gi|153811945|ref|ZP_01964613.1| hypothetical protein RUMOBE_02338 [Ruminococcus obeum ATCC 29174] gi|149832079|gb|EDM87164.1| hypothetical protein RUMOBE_02338 [Ruminococcus obeum ATCC 29174] Length = 1061 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L +++ F + + I+F +L ++ G G GK+++ +AI + YG + Sbjct: 1 MKPLRLKMQAFGSYGKETTIDFEKVNQNLFLITGDTGAGKTTIFDAIVFALYGEASSSLN 60 Query: 84 G 84 Sbjct: 61 K 61 >gi|161521384|ref|YP_001584811.1| ATP-dependent OLD family endonuclease [Burkholderia multivorans ATCC 17616] gi|189352449|ref|YP_001948076.1| probable bacteriophage protein [Burkholderia multivorans ATCC 17616] gi|327198026|ref|YP_004306395.1| gp28 [Burkholderia phage KS5] gi|160345434|gb|ABX18519.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia multivorans ATCC 17616] gi|189336471|dbj|BAG45540.1| probable bacteriophage protein [Burkholderia multivorans ATCC 17616] gi|310657160|gb|ADP02275.1| gp28 [Burkholderia phage KS5] Length = 626 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR + I F D +T + G NG GKS++ A++W F G Sbjct: 1 MKIQSVRIKNFRTLKD-VAIPF-DSVTTLIGPNGTGKSTVLRALDWFFNG 48 >gi|281364022|ref|NP_726199.3| rad50 [Drosophila melanogaster] gi|272432636|gb|AAF46847.3| rad50 [Drosophila melanogaster] Length = 1318 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|269986423|gb|EEZ92710.1| intracellular protein transport protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 88 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ + R +I+F D + I+ G G GK+S+ +IE+ +G K + Sbjct: 3 ISKIKLENIRSHN-KTEIQFTDGINIITGNTGSGKTSILMSIEYALFGKIGEGKEEGKML 61 Query: 89 KRSIKTPMPMCMAV 102 R + + + + Sbjct: 62 LRRNSSEGEIKITI 75 >gi|162455827|ref|YP_001618194.1| hypothetical protein sce7545 [Sorangium cellulosum 'So ce 56'] gi|161166409|emb|CAN97714.1| hypothetical protein sce7545 [Sorangium cellulosum 'So ce 56'] Length = 409 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + +F+ F + Q +E + T++ G NG GKS+ +A+ +L Sbjct: 2 LTSIRLRNFKSFAD-QTVELSP-FTLLLGANGSGKSNFLDALRFL 44 >gi|315286765|ref|ZP_07872179.1| DNA replication and repair protein RecF [Listeria ivanovii FSL F6-596] gi|313630894|gb|EFR98586.1| DNA replication and repair protein RecF [Listeria ivanovii FSL F6-596] Length = 372 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EAI L + R + D Sbjct: 1 MFLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAILMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|282863317|ref|ZP_06272376.1| DNA replication and repair protein RecF [Streptomyces sp. ACTE] gi|282561652|gb|EFB67195.1| DNA replication and repair protein RecF [Streptomyces sp. ACTE] Length = 376 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T+ G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RAEVPLDPGVTVFVGANGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|291295369|ref|YP_003506767.1| SMC domain-containing protein [Meiothermus ruber DSM 1279] gi|290470328|gb|ADD27747.1| SMC domain protein [Meiothermus ruber DSM 1279] Length = 906 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTI--VNGQNGYGKSSLSEAIEWLFYGYTQR 80 K L + + F + E Q ++F +++ + G G GKS+L +AI + Y T R Sbjct: 1 MKPLKLLLDGFGPYAEAQAVQFDHDVSLFAITGPTGSGKSTLLDAITYALYKATPR 56 >gi|226693630|sp|Q9W252|RAD50_DROME RecName: Full=DNA repair protein RAD50 Length = 1318 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|220910787|ref|YP_002486096.1| recombination protein F [Arthrobacter chlorophenolicus A6] gi|254790459|sp|B8H7D1|RECF_ARTCA RecName: Full=DNA replication and repair protein recF gi|219857665|gb|ACL38007.1| DNA replication and repair protein RecF [Arthrobacter chlorophenolicus A6] Length = 402 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + ++ + + +T++ G NG GK++L EAI +L + R Sbjct: 1 MYLEHLSLTDFRSYAQVDLV-LSPGVTVLVGYNGIGKTNLMEAIGYLATLSSHRVSSDGP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LLRFGTE 66 >gi|209877749|ref|XP_002140316.1| structural maintenance of chromosomes protein [Cryptosporidium muris RN66] gi|209555922|gb|EEA05967.1| structural maintenance of chromosomes protein, putative [Cryptosporidium muris RN66] Length = 1231 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + + +F + G NG GKS++ ++I ++ + + Sbjct: 1 MYIEEIILDGFKSYQRRTVVGKFHPCFNAITGLNGSGKSNILDSICFVLGITNLSQIRIN 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 KLEELVYK 68 >gi|154486349|ref|ZP_02027756.1| hypothetical protein BIFADO_00158 [Bifidobacterium adolescentis L2-32] gi|154084212|gb|EDN83257.1| hypothetical protein BIFADO_00158 [Bifidobacterium adolescentis L2-32] Length = 403 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + + ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MHISRLALDHYRSW-DHCVLDFEPGINILQGSNGLGKTNIVEAVEVLSTGSSHR 53 >gi|119025021|ref|YP_908866.1| recombination protein RecF [Bifidobacterium adolescentis ATCC 15703] gi|254790464|sp|A0ZZA1|RECF_BIFAA RecName: Full=DNA replication and repair protein recF gi|118764605|dbj|BAF38784.1| recombination protein RecF [Bifidobacterium adolescentis ATCC 15703] Length = 403 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + + ++F + I+ G NG GK+++ EA+E L G + R Sbjct: 1 MHISRLALDHYRSW-DHCVLDFEPGINILQGSNGLGKTNIVEAVEVLSTGSSHR 53 >gi|327485552|gb|AEA79958.1| Exonuclease SbcC [Vibrio cholerae LMA3894-4] Length = 1013 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTP 95 + P Sbjct: 61 RTGDQMRCDYADP 73 >gi|303231869|ref|ZP_07318580.1| exonuclease SbcCD, C subunit [Veillonella atypica ACS-049-V-Sch6] gi|302513476|gb|EFL55507.1| exonuclease SbcCD, C subunit [Veillonella atypica ACS-049-V-Sch6] Length = 1027 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F+ + +++G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFSKLENHSMFLISGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPERM 76 >gi|298714806|emb|CBJ25705.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1333 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 21/101 (20%) Query: 29 LLDIEISHFRGFTEIQKIEFADH----------------LTIVNGQNGYGKSSLSEAIEW 72 L ++I F+ F + + I+ LT+V G NG GKS+L + + + Sbjct: 33 LKRLQIEGFKTFRDSEVIDVCPGWQPTPYNEEESLAPSPLTVVFGGNGAGKSALFDGVFF 92 Query: 73 LFYGYTQRRKHGDS-----IKKRSIKTPMPMCMAVPRCKYQ 108 + G + + + +S+ P A +Q Sbjct: 93 VLSGQSSKCIRSSRGSAQLVNDQSVLQKGPDAFASVTITFQ 133 >gi|258564985|ref|XP_002583237.1| hypothetical protein UREG_06204 [Uncinocarpus reesii 1704] gi|237906938|gb|EEP81339.1| hypothetical protein UREG_06204 [Uncinocarpus reesii 1704] Length = 1483 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ ++ Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 295 MVITHLVLTNFKSYSGRQVVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 353 >gi|254416524|ref|ZP_05030276.1| RecF/RecN/SMC N terminal domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176728|gb|EDX71740.1| RecF/RecN/SMC N terminal domain protein [Microcoleus chthonoplastes PCC 7420] Length = 656 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + +++ F + +EFA + I+ GQN GK++L EA+ F R Sbjct: 1 MFLAKFRLYNYKSFRDSGWLEFAPGINIIVGQNNSGKTALLEALTLNFKNVPHRSLR 57 >gi|125855523|ref|XP_001334257.1| PREDICTED: structural maintenance of chromosomes protein 1B-like isoform 1 [Danio rerio] Length = 1235 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L +++ +F+ + Q I + G NG GKS++ +A+ ++ Sbjct: 4 LKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAA 54 >gi|115526051|ref|YP_782962.1| ATP-dependent OLD family endonuclease [Rhodopseudomonas palustris BisA53] gi|115519998|gb|ABJ07982.1| ATP-dependent endonuclease of the OLD family-like protein [Rhodopseudomonas palustris BisA53] Length = 582 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 + + + FR ++ + F LT++ G+N GKS++ +A+ L + RR Sbjct: 1 MHIDCLRLQRFRSCADVT-VRFHRELTVLVGENNGGKSNIVDALRLLTLPLSGRRDRYPE 59 Query: 84 GDSIKKRSIKT 94 D +++ S +T Sbjct: 60 DDDLRRGSTET 70 >gi|28317081|gb|AAO39559.1| LP09268p [Drosophila melanogaster] Length = 1322 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 8 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 59 >gi|320529155|ref|ZP_08030247.1| exonuclease SbcC [Selenomonas artemidis F0399] gi|320138785|gb|EFW30675.1| exonuclease SbcC [Selenomonas artemidis F0399] Length = 1019 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Query: 34 ISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + F + E Q ++F +++G G GK+++ +AI + YG + ++ Sbjct: 1 MQAFGSYVEEQILDFETALSGAPFVLIHGATGAGKTTILDAIVFALYGESSGDVREGAML 60 Query: 89 KRSIK-----TPMPMCMAVPRCKYQL 109 + S T + A+ R +Y++ Sbjct: 61 RSSAAPPERVTEVEYTFALGRRRYRV 86 >gi|317482361|ref|ZP_07941381.1| DNA replication and repair protein RecF [Bifidobacterium sp. 12_1_47BFAA] gi|316916241|gb|EFV37643.1| DNA replication and repair protein RecF [Bifidobacterium sp. 12_1_47BFAA] Length = 412 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + H+R ++++ ++F + I+ G+NG GK++L EA+E L G + R Sbjct: 1 MHISRLALDHYRSWSQVV-VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRASSTLP 59 Query: 87 IKKRSIKT 94 + +R T Sbjct: 60 LIERGQTT 67 >gi|315504944|ref|YP_004083831.1| smc domain protein [Micromonospora sp. L5] gi|315411563|gb|ADU09680.1| SMC domain protein [Micromonospora sp. L5] Length = 645 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ + +S+F+ F E I+ D LT V G NG GK++ EA+ LF RK Sbjct: 1 MKITRLRLSNFQSFGPEPTAIDL-DGLTYVLGPNGSGKTAALEALSRLFSPLAAERK 56 >gi|194882203|ref|XP_001975202.1| GG22190 [Drosophila erecta] gi|190658389|gb|EDV55602.1| GG22190 [Drosophila erecta] Length = 1303 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYAEDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|167767258|ref|ZP_02439311.1| hypothetical protein CLOSS21_01777 [Clostridium sp. SS2/1] gi|167711233|gb|EDS21812.1| hypothetical protein CLOSS21_01777 [Clostridium sp. SS2/1] gi|291559431|emb|CBL38231.1| hypothetical protein CL2_12570 [butyrate-producing bacterium SSC/2] Length = 517 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGD 85 K+ ++I +FRG+ + +I+ D LT++ G+N GKS++ EA++ + G + Sbjct: 1 MKIDSMKIKNFRGYKDETEIKLND-LTVLVGKNDIGKSTILEALDIFFNDGKGVIKLDKT 59 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQL 109 + +S +T + + + C +L Sbjct: 60 DVNVKS-RTEENLDIEISVCFSEL 82 >gi|119872396|ref|YP_930403.1| SMC domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673804|gb|ABL88060.1| SMC domain protein [Pyrobaculum islandicum DSM 4184] Length = 790 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++++ IE+ +FR + ++ D +TI+ G+ G GK+SL AIE+ +G Sbjct: 1 MWRIEKIELENFRSYKGRHEVSLGD-VTILLGRIGAGKTSLLYAIEYALFG 50 >gi|89256653|ref|YP_514015.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica LVS] gi|115315066|ref|YP_763789.1| DNA replication and repair protein RecF [Francisella tularensis subsp. holarctica OSU18] gi|156502796|ref|YP_001428861.1| DNA replication and repair protein RecF [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010539|ref|ZP_02275470.1| DNA replication and repair protein RecF [Francisella tularensis subsp. holarctica FSC200] gi|254367965|ref|ZP_04983985.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica 257] gi|254369521|ref|ZP_04985532.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica FSC022] gi|290953408|ref|ZP_06558029.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica URFT1] gi|295313369|ref|ZP_06803978.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica URFT1] gi|122324928|sp|Q0BL82|RECF_FRATO RecName: Full=DNA replication and repair protein recF gi|122500520|sp|Q2A2N7|RECF_FRATH RecName: Full=DNA replication and repair protein recF gi|259563657|sp|A7ND52|RECF_FRATF RecName: Full=DNA replication and repair protein recF gi|89144484|emb|CAJ79791.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica LVS] gi|115129965|gb|ABI83152.1| DNA replication and repair protein RecF [Francisella tularensis subsp. holarctica OSU18] gi|134253775|gb|EBA52869.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica 257] gi|156253399|gb|ABU61905.1| DNA replication and repair protein RecF [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122475|gb|EDO66610.1| DNA replication and repair protein recF [Francisella tularensis subsp. holarctica FSC022] Length = 349 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYISNLRLQNFRNIPAK-SFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|56707876|ref|YP_169772.1| DNA replication and repair protein recF [Francisella tularensis subsp. tularensis SCHU S4] gi|110670347|ref|YP_666904.1| DNA replication and repair protein recF [Francisella tularensis subsp. tularensis FSC198] gi|134301718|ref|YP_001121686.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis WY96-3418] gi|224456955|ref|ZP_03665428.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis MA00-2987] gi|254370369|ref|ZP_04986374.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis FSC033] gi|254874691|ref|ZP_05247401.1| recF, DNA replication and repair protein [Francisella tularensis subsp. tularensis MA00-2987] gi|81597652|sp|Q5NGS0|RECF_FRATT RecName: Full=DNA replication and repair protein recF gi|123359518|sp|Q14I72|RECF_FRAT1 RecName: Full=DNA replication and repair protein recF gi|259563660|sp|A4IXB4|RECF_FRATW RecName: Full=DNA replication and repair protein recF gi|56604368|emb|CAG45395.1| DNA replication and repair protein recF [Francisella tularensis subsp. tularensis SCHU S4] gi|110320680|emb|CAL08778.1| DNA replication and repair protein recF [Francisella tularensis subsp. tularensis FSC198] gi|134049495|gb|ABO46566.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis WY96-3418] gi|151568612|gb|EDN34266.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis FSC033] gi|254840690|gb|EET19126.1| recF, DNA replication and repair protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159059|gb|ADA78450.1| DNA replication and repair protein RecF [Francisella tularensis subsp. tularensis NE061598] gi|328676814|gb|AEB27684.1| DNA recombination and repair protein RecF [Francisella cf. novicida Fx1] Length = 349 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYISNLRLQNFRNIPAK-SFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|319641270|ref|ZP_07995969.1| hypothetical protein HMPREF9011_01566 [Bacteroides sp. 3_1_40A] gi|317387143|gb|EFV68023.1| hypothetical protein HMPREF9011_01566 [Bacteroides sp. 3_1_40A] Length = 531 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I +F+G E I F D + ++ G NG GKS+L EAI Sbjct: 2 IERIIIKNFKGIKE-ADISFHDKINVIVGNNGVGKSTLIEAISLTLG 47 >gi|296268002|ref|YP_003650634.1| DNA replication and repair protein RecF [Thermobispora bispora DSM 43833] gi|296090789|gb|ADG86741.1| DNA replication and repair protein RecF [Thermobispora bispora DSM 43833] Length = 401 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++E ++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVASLSLTDFRSYAG-VELELEPGVSAFIGANGQGKTNLVEALGYVATHTSHRVATDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRHGAQ 66 >gi|269914207|gb|ACZ52623.1| FI13085p [Drosophila melanogaster] Length = 1322 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 8 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 59 >gi|194336900|ref|YP_002018694.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309377|gb|ACF44077.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 422 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 K+ + + +FRG E + F LT++ NG GK+++ +A+ L T R K Sbjct: 1 MKIRTVTLKNFRGI-EELCLPFDAGLTVIAAVNGGGKTTVVDALAMLLSWLTARTKRDSG 59 Query: 86 ---SIKKRSIK 93 IK IK Sbjct: 60 KGRYIKDVEIK 70 >gi|317026241|ref|XP_001389243.2| DNA repair protein Rad50 [Aspergillus niger CBS 513.88] Length = 1342 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +K+L + + + K+ + I R F T + I+F LT++ G NG GK+++ E + Sbjct: 16 FTKALLTIWGLLVAAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECL 75 Query: 71 EWLFYG 76 ++ G Sbjct: 76 KYATTG 81 >gi|300871522|ref|YP_003786395.1| DNA replication and repair protein RecF [Brachyspira pilosicoli 95/1000] gi|300689223|gb|ADK31894.1| DNA replication and repair protein, RecF [Brachyspira pilosicoli 95/1000] Length = 355 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + FR + E EF+ H+ I+ G NG GK+++ EAI L G + R + + Sbjct: 3 LKELTLRSFRNYNENT-FEFSKHINILYGINGCGKTNILEAIYILGNGISFRTRLDRELI 61 Query: 89 KRSIK 93 K Sbjct: 62 KYGND 66 >gi|307726822|ref|YP_003910035.1| ATP-dependent OLD family endonuclease [Burkholderia sp. CCGE1003] gi|307587347|gb|ADN60744.1| ATP-dependent OLD family endonuclease [Burkholderia sp. CCGE1003] Length = 634 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR ++ I F D +T G NG GKS++ A++W F G Sbjct: 1 MKIQSVRIRNFRALRDVT-IPF-DSVTTFIGPNGAGKSTVLRALDWYFNG 48 >gi|289422620|ref|ZP_06424462.1| SMC domain protein [Peptostreptococcus anaerobius 653-L] gi|289156971|gb|EFD05594.1| SMC domain protein [Peptostreptococcus anaerobius 653-L] Length = 907 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 7/90 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +EI +++ Q I+F + L + G G GKS++ +AI YG R Sbjct: 1 MKPIRLEIDGINSYSKKQLIDFEELTSRGLFGIFGNTGSGKSTILDAITLALYGNIARSS 60 Query: 83 HG---DSIKKRSIKTPMPMCMAVPRCKYQL 109 + +K + + M R Y++ Sbjct: 61 KDFINSNSQKALVDFEFELGMGQSRRYYKI 90 >gi|300779091|ref|ZP_07088949.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300504601|gb|EFK35741.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 703 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + I +FR F +F + + + G+NG GK++L A+ L R + Sbjct: 1 MYISGLSIRNFRNFKS-AHFKFTEGINTIIGENGSGKTNLFYALRILIDDSLPRYIN 56 >gi|225851132|ref|YP_002731366.1| putative DNA double-strand break repair protein Rad50 [Persephonella marina EX-H1] gi|225645387|gb|ACO03573.1| putative DNA double-strand break repair protein Rad50 [Persephonella marina EX-H1] Length = 893 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I + +F TE +I F D +T+ G+NG GKSS+ E I + YG T + D + Sbjct: 3 LKRIYLKNFLTHTE-TEINFPDKGITVFIGENGAGKSSIIEGISYALYGKTSKGNLQDIV 61 Query: 88 KKRSIKTPMPM 98 + + + + Sbjct: 62 QWGKNEAKVEL 72 >gi|190346081|gb|EDK38086.2| hypothetical protein PGUG_02184 [Meyerozyma guilliermondii ATCC 6260] Length = 1183 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q I F + V G NG GKS++ +++ ++F + + G Sbjct: 139 ISQLVLTNFKSYAGQQVIGPFNASFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 195 >gi|292628155|ref|XP_002666865.1| PREDICTED: structural maintenance of chromosomes protein 1B-like [Danio rerio] Length = 1079 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L +++ +F+ + Q I + G NG GKS++ +A+ ++ Sbjct: 4 LKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAA 54 >gi|238910207|ref|ZP_04654044.1| ATP binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 465 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FR F ++ I F +H+TI+ NG GK+++ +AI + Sbjct: 1 MRIDKLSLLNFRCFRQLD-ITFDEHITILVAPNGAGKTAVLDAIRLALF 48 >gi|126348544|emb|CAJ90268.1| putative exonuclease [Streptomyces ambofaciens ATCC 23877] Length = 997 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L ++I+ F F Q ++F D + +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGASQSVDFDDLSAAGIFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|119947310|ref|YP_944990.1| DNA replication and repair protein RecF [Psychromonas ingrahamii 37] gi|166220727|sp|A1T0X6|RECF_PSYIN RecName: Full=DNA replication and repair protein recF gi|119865914|gb|ABM05391.1| DNA replication and repair protein RecF [Psychromonas ingrahamii 37] Length = 359 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + I FR ++F + +V G NG GK++L EAI +L G + R Sbjct: 1 MSLSRLIIHQFRNINSAT-LDFNPKINVVVGPNGSGKTALLEAIYFLGLGRSFR 53 >gi|308503629|ref|XP_003113998.1| CRE-RAD-50 protein [Caenorhabditis remanei] gi|308261383|gb|EFP05336.1| CRE-RAD-50 protein [Caenorhabditis remanei] Length = 1311 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 24 KLIFKLLDIEISHFRGFTEI----QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L+ K L + I R + KIEF T+++G NG GK++ EA+ ++ G Sbjct: 13 ELMAKFLRLNIRGIRSVGDEDHHVHKIEFLSPCTLISGPNGTGKTTTIEALNFVTTGQ 70 >gi|302552698|ref|ZP_07305040.1| recombination protein F [Streptomyces viridochromogenes DSM 40736] gi|302470316|gb|EFL33409.1| recombination protein F [Streptomyces viridochromogenes DSM 40736] Length = 373 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYP-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|296804808|ref|XP_002843252.1| structural maintenance of chromosomes protein 4 [Arthroderma otae CBS 113480] gi|238845854|gb|EEQ35516.1| structural maintenance of chromosomes protein 4 [Arthroderma otae CBS 113480] Length = 1427 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 222 MVITHLVLTNFKSYAGQQFVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 280 >gi|195346724|ref|XP_002039907.1| GM15911 [Drosophila sechellia] gi|194135256|gb|EDW56772.1| GM15911 [Drosophila sechellia] Length = 1303 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|218777924|ref|YP_002429242.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759308|gb|ACL01774.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] Length = 671 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 27 FKLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L I I +FR F E K + LT + G+N GKS++ +AI ++ Q Sbjct: 1 MYLSKITIENFRCFGERDKKFEMSLKPGLTTLVGENDAGKSAIIDAIRYVLCTTDQEWLR 60 >gi|153952674|ref|YP_001393439.1| recombination protein F [Clostridium kluyveri DSM 555] gi|189039621|sp|A5N460|RECF_CLOK5 RecName: Full=DNA replication and repair protein recF gi|146345555|gb|EDK32091.1| RecF [Clostridium kluyveri DSM 555] Length = 364 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ IEF ++ I G N GK+++ E++ + G + R Sbjct: 1 MYIKYLKLINFRNYKELD-IEFDKNINIFVGDNAQGKTNILESMYYCSIGKSPRTSKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|295134624|ref|YP_003585300.1| ATPase involved in DNA repair [Zunongwangia profunda SM-A87] gi|294982639|gb|ADF53104.1| ATPase involved in DNA repair [Zunongwangia profunda SM-A87] Length = 1052 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 27 FKLLDIEISHFRGFT--EIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +EI FR + E +F+ + NG+GK+S +A+EW + Sbjct: 1 MKIQKVEIQAFRAYGKVENGTFDFSTKSNAIADFISIYAPNGFGKTSFYDAVEWAYTNRI 60 Query: 79 QRRKHGDSIKKRSIKTPMPM 98 R + K K+ + Sbjct: 61 SRFDRKEKFNKALAKSEREI 80 >gi|302658026|ref|XP_003020723.1| hypothetical protein TRV_05174 [Trichophyton verrucosum HKI 0517] gi|291184581|gb|EFE40105.1| hypothetical protein TRV_05174 [Trichophyton verrucosum HKI 0517] Length = 1431 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 225 MVITHLVLTNFKSYAGQQFVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 283 >gi|302498499|ref|XP_003011247.1| hypothetical protein ARB_02529 [Arthroderma benhamiae CBS 112371] gi|291174796|gb|EFE30607.1| hypothetical protein ARB_02529 [Arthroderma benhamiae CBS 112371] Length = 1431 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 225 MVITHLVLTNFKSYAGQQFVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 283 >gi|195585702|ref|XP_002082619.1| GD11670 [Drosophila simulans] gi|194194628|gb|EDX08204.1| GD11670 [Drosophila simulans] Length = 1301 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F ++Q I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 4 IESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTG 55 >gi|169621967|ref|XP_001804393.1| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15] gi|160704664|gb|EAT78431.2| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15] Length = 1299 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + I+F LT++ G NG GK+++ E + + G Sbjct: 3 RIDRLMIQGIRSFGPERGETIKFDPPLTLIVGWNGSGKTTIIECLRYATTG 53 >gi|227514122|ref|ZP_03944171.1| recombination protein F [Lactobacillus fermentum ATCC 14931] gi|260662541|ref|ZP_05863436.1| DNA replication and repair protein RecF [Lactobacillus fermentum 28-3-CHN] gi|227087493|gb|EEI22805.1| recombination protein F [Lactobacillus fermentum ATCC 14931] gi|260553232|gb|EEX26175.1| DNA replication and repair protein RecF [Lactobacillus fermentum 28-3-CHN] gi|299782688|gb|ADJ40686.1| DNA replication and repair protein recF [Lactobacillus fermentum CECT 5716] Length = 373 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++++SH+R + E + FA + ++ G+N GK++L EAI L + + R + Sbjct: 3 LQELQLSHYRNY-EELAVTFAPGINVLIGENAQGKTNLLEAIYLLAFTKSHRTAKDRELI 61 Query: 89 KRSIKTPM 96 K Sbjct: 62 GWHQKLAR 69 >gi|184154480|ref|YP_001842820.1| recombination protein F [Lactobacillus fermentum IFO 3956] gi|226737808|sp|B2GEV1|RECF_LACF3 RecName: Full=DNA replication and repair protein recF gi|183225824|dbj|BAG26340.1| DNA replication and repair protein RecF [Lactobacillus fermentum IFO 3956] Length = 373 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++++SH+R + E + FA + ++ G+N GK++L EAI L + + R + Sbjct: 3 LQELQLSHYRNY-EELAVTFAPGINVLIGENAQGKTNLLEAIYLLAFTKSHRTAKDRELI 61 Query: 89 KRSIKTPM 96 K Sbjct: 62 GWHQKLAR 69 >gi|331693902|ref|YP_004330141.1| DNA replication and repair protein recF [Pseudonocardia dioxanivorans CB1190] gi|326948591|gb|AEA22288.1| DNA replication and repair protein recF [Pseudonocardia dioxanivorans CB1190] Length = 380 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + E ++ +T++ G NG GK++L EA+ ++ + R Sbjct: 1 MHLRRLAVTDFRSW-EQADLDLDPGVTVLVGSNGEGKTNLVEAVGYIATLGSHRVATDAP 59 Query: 87 IKKRS 91 + +R Sbjct: 60 LIRRG 64 >gi|327306415|ref|XP_003237899.1| nuclear condensin complex subunit Smc4 [Trichophyton rubrum CBS 118892] gi|326460897|gb|EGD86350.1| nuclear condensin complex subunit Smc4 [Trichophyton rubrum CBS 118892] Length = 1431 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 225 MVITHLVLTNFKSYAGQQFVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 283 >gi|318040496|ref|ZP_07972452.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus sp. CB0101] Length = 831 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 I T+V G NG GKS++ + + + + R + + Sbjct: 2 TIPLEQGFTVVTGPNGSGKSNILDGVLFCLGLASSRGMRAERLPDL 47 >gi|307108886|gb|EFN57125.1| hypothetical protein CHLNCDRAFT_51187 [Chlorella variabilis] Length = 2055 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + F+ +++ + F L ++ G NG GKSSL +A+ + F Sbjct: 917 ITSVRLQGFKSVSQLD-VRFGRGLNVIVGANGCGKSSLLDALCFAF 961 >gi|261368404|ref|ZP_05981287.1| putative exonuclease SbcC [Subdoligranulum variabile DSM 15176] gi|282569556|gb|EFB75091.1| putative exonuclease SbcC [Subdoligranulum variabile DSM 15176] Length = 468 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F + +++F L ++ G G GK++L +AI + YG T Sbjct: 1 MKPLYLTLCAFGPYAGRTELDFAKFGGSGLFLIGGDTGAGKTALFDAITFALYGETTGEN 60 Query: 83 HGDSIKKRSIKTP 95 ++ + P Sbjct: 61 RKTTMLRSDFAAP 73 >gi|257063771|ref|YP_003143443.1| ATPase involved in DNA repair [Slackia heliotrinireducens DSM 20476] gi|256791424|gb|ACV22094.1| ATPase involved in DNA repair [Slackia heliotrinireducens DSM 20476] Length = 1081 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F + + I+F L ++ G G GK+ + +AI + YG Sbjct: 1 MKPLHLTMSAFGPYADEVSIDFTTFGDSGLYLICGDTGAGKTIIFDAIAFALYGTPSGEN 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 RTSSMLRSDFADP 73 >gi|256053077|ref|XP_002570035.1| chondroitin sulfate proteoglycan [Schistosoma mansoni] gi|227287391|emb|CAY17654.1| Structural maintenance of chromosome 3 (Chondroitin sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan), putative [Schistosoma mansoni] Length = 1376 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIE 71 L++SL + R +I +++ +F+ + ++ + F + + + G NG GKS++ +++ Sbjct: 35 LAQSLDANGPRLMITQIVT---ENFKSYGGMRVMGPFHKNFSCIIGPNGSGKSNVIDSML 91 Query: 72 WLFYGYTQRRKHGDSIKKR 90 ++F GY + I + Sbjct: 92 FVF-GYRASKVRSKKISQL 109 >gi|89901813|ref|YP_524284.1| putative GTP-binding protein [Rhodoferax ferrireducens T118] gi|89346550|gb|ABD70753.1| putative GTP-binding protein [Rhodoferax ferrireducens T118] Length = 880 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL + I HF+ F + I F D L + N GKS+++EAI F+ Sbjct: 1 MKLRRLRIEHFKRFRDPLVINGFTDGLNLFAAPNESGKSTVAEAIRAAFFE 51 >gi|332672194|ref|YP_004455202.1| putative exonuclease [Cellulomonas fimi ATCC 484] gi|332341232|gb|AEE47815.1| putative exonuclease [Cellulomonas fimi ATCC 484] Length = 1044 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F ++FA L ++ G G GKS+L +A+ + YG Sbjct: 1 MQLRSLTVQALGPFAGRHTVDFAALGASGLFLLEGPTGSGKSTLIDAVVFALYGKVASAD 60 Query: 83 HGDSIKKRSI 92 D + + Sbjct: 61 ASDDRLRSAY 70 >gi|317128678|ref|YP_004094960.1| SMC domain protein [Bacillus cellulosilyticus DSM 2522] gi|315473626|gb|ADU30229.1| SMC domain protein [Bacillus cellulosilyticus DSM 2522] Length = 1135 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F E Q ++F + + G G GKSSL +A+ YG +R Sbjct: 1 MKPLTLSLKGLHSFREKQTVDFRTLCEGGIFGIFGPTGSGKSSLLDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|224060949|ref|XP_002194869.1| PREDICTED: structural maintenance of chromosomes 4 [Taeniopygia guttata] Length = 1570 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 342 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNIIDSLLFVF-GYRAQKIRSKKL 400 >gi|330964723|gb|EGH64983.1| hypothetical protein PSYAC_08737 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 117 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +FR + E +F +V G NG GK+SL + Y G Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAECLIPYGNAMGQGQE 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|255726652|ref|XP_002548252.1| structural maintenance of chromosome 3 [Candida tropicalis MYA-3404] gi|240134176|gb|EER33731.1| structural maintenance of chromosome 3 [Candida tropicalis MYA-3404] Length = 1193 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIIIQGFKTYKNVTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVL 49 >gi|254503692|ref|ZP_05115843.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] gi|222439763|gb|EEE46442.1| RecF/RecN/SMC N terminal domain, putative [Labrenzia alexandrii DFL-11] Length = 385 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ FR + I I + + G NG GK+++ EAI +L G RR I Sbjct: 8 RLTRLTLTGFRNYA-IMGIGLSAGMVAFVGANGAGKTNILEAISFLTAGRGLRRAALTDI 66 Query: 88 KKRSIK 93 + Sbjct: 67 ARVGGD 72 >gi|213969459|ref|ZP_03397596.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213925830|gb|EEB59388.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 394 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +FR + E +F +V G NG GK+SL + Y G Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAECLIPYGNAMGQGQE 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|73748390|ref|YP_307629.1| putative exonuclease SbcC [Dehalococcoides sp. CBDB1] gi|73660106|emb|CAI82713.1| putative exonuclease SbcC [Dehalococcoides sp. CBDB1] Length = 859 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F + EI F H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 5 KLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVIS 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + + + + YQ+ Sbjct: 65 LNEQEAEVSLDFEISGELYQV 85 >gi|289432438|ref|YP_003462311.1| SMC domain protein [Dehalococcoides sp. GT] gi|288946158|gb|ADC73855.1| SMC domain protein [Dehalococcoides sp. GT] Length = 859 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F + EI F H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 5 KLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVIS 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + + + + YQ+ Sbjct: 65 LNEQEAEVSLDFEISGELYQV 85 >gi|56693118|ref|YP_164705.1| hypothetical protein LP65_gp070 [Lactobacillus phage LP65] gi|54633619|gb|AAV35890.1| orf70 [Lactobacillus phage LP65] Length = 638 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I+I +FR + KI+ + LT+++G+NG GKSS+ AI + + TQ+ + D Sbjct: 1 MKLETIKIRNFRSIRSLDFKID-SRGLTLISGKNGQGKSSIYAAILYALFNKTQKGQTAD 59 Query: 86 SIK 88 +I Sbjct: 60 AII 62 >gi|254360631|ref|ZP_04976780.1| DNA recombination protein RecF [Mannheimia haemolytica PHL213] gi|153091171|gb|EDN73176.1| DNA recombination protein RecF [Mannheimia haemolytica PHL213] Length = 361 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I+HFR + + F+ H + G NG GK+SL E+I +L +G + + Sbjct: 1 MALTRLLINHFRNI-QHTDLAFSPHFNFLVGANGSGKTSLLESIFYLGHGRSFKS 54 >gi|261415579|ref|YP_003249262.1| SMC domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372035|gb|ACX74780.1| SMC domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326977|gb|ADL26178.1| putative nuclease SbcCD, C subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1182 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ IE + I+F + + + G G GK+S+ +AI YG T R Sbjct: 1 MKIKKIEFCNINSLAGEWTIDFESPDFANNGMFCIAGPTGSGKTSILDAICLGLYGKTPR 60 Query: 81 --RKHGDSIKKRSIKT 94 GDS + + T Sbjct: 61 LGAIKGDSNEVMTYDT 76 >gi|168065224|ref|XP_001784554.1| condensin complex component SMC3 [Physcomitrella patens subsp. patens] gi|162663878|gb|EDQ50619.1| condensin complex component SMC3 [Physcomitrella patens subsp. patens] Length = 1192 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E E F+ V G NG GK++ AI ++ Sbjct: 1 MYIKQVIIEGFKSYKEQVATEPFSPKHNCVVGANGSGKTNFFHAIRFVL 49 >gi|314965766|gb|EFT09865.1| recombination protein F [Propionibacterium acnes HL082PA2] Length = 401 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMTAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|314922681|gb|EFS86512.1| recombination protein F [Propionibacterium acnes HL001PA1] gi|314982907|gb|EFT26999.1| recombination protein F [Propionibacterium acnes HL110PA3] gi|315091213|gb|EFT63189.1| recombination protein F [Propionibacterium acnes HL110PA4] gi|315094447|gb|EFT66423.1| recombination protein F [Propionibacterium acnes HL060PA1] gi|315105167|gb|EFT77143.1| recombination protein F [Propionibacterium acnes HL050PA2] Length = 401 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-RADVPMTAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|309811297|ref|ZP_07705084.1| DNA replication and repair protein RecF [Dermacoccus sp. Ellin185] gi|308434604|gb|EFP58449.1| DNA replication and repair protein RecF [Dermacoccus sp. Ellin185] Length = 440 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR +TE + +E AD +T G NG GK++L EA +L + R Sbjct: 1 MRLRHLSLRDFRSYTEAE-VELADGVTTFVGLNGQGKTNLVEAAGYLATLGSHRVSTDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRFGAE 66 >gi|295111456|emb|CBL28206.1| ATPase involved in DNA repair [Synergistetes bacterium SGP1] Length = 1067 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L + + F + + ++F L ++ G G GK+++ +AI + YG T Sbjct: 1 MRPLTLTMRAFGSYNKETTVDFTRPNQKLFLITGDTGAGKTTIFDAIVFALYGETSASGR 60 >gi|284097669|ref|ZP_06385694.1| ATP-dependent endonuclease, OLD family protein [Candidatus Poribacteria sp. WGA-A3] gi|283830821|gb|EFC34906.1| ATP-dependent endonuclease, OLD family protein [Candidatus Poribacteria sp. WGA-A3] Length = 153 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L +I+I FR F + + D T + G NG GKS++ +A+ F Sbjct: 1 MRLAEIKIKIFRSFEDETIV--LDDYTCLVGPNGAGKSNVLQALNLFFRNTAAASV 54 >gi|282853042|ref|ZP_06262379.1| DNA replication and repair protein RecF [Propionibacterium acnes J139] gi|282582495|gb|EFB87875.1| DNA replication and repair protein RecF [Propionibacterium acnes J139] gi|327328942|gb|EGE70702.1| RecF protein [Propionibacterium acnes HL103PA1] Length = 394 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + T G NG GK++L EA+E+L + R + Sbjct: 1 MFVERLELVDFRSYV-RADVPMTAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRLGADQ 67 >gi|258646401|ref|ZP_05733870.1| DNA replication and repair protein RecF [Dialister invisus DSM 15470] gi|260403802|gb|EEW97349.1| DNA replication and repair protein RecF [Dialister invisus DSM 15470] Length = 355 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K IEI +F F+ I+ A+++T++ G+NG GK+++ E+I + G + R + + + Sbjct: 5 KTHLIEIRNFEDFS----IDPAENMTVLTGKNGTGKTNIIESIYFASVGKSFRTSNDEEL 60 Query: 88 KKRSIK 93 + + + Sbjct: 61 IRLNKE 66 >gi|147669170|ref|YP_001213988.1| SMC domain-containing protein [Dehalococcoides sp. BAV1] gi|146270118|gb|ABQ17110.1| SMC domain protein [Dehalococcoides sp. BAV1] Length = 859 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F + EI F H + GQNG GKS+L +AI W +G ++ + D I Sbjct: 5 KLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVIS 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + + + + YQ+ Sbjct: 65 LNEQEAEVSLDFEISGELYQV 85 >gi|255718699|ref|XP_002555630.1| KLTH0G13750p [Lachancea thermotolerans] gi|238937014|emb|CAR25193.1| KLTH0G13750p [Lachancea thermotolerans] Length = 1399 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + Q + F + V G NG GKS++ +++ ++F G+ + + Sbjct: 129 INRLSLHNFKSYAGTQVVGPFHSSFSAVVGPNGSGKSNVIDSLLFVF-GFRANKMRQGKL 187 Query: 88 KKRSIKTPMPMCM 100 K+ + Sbjct: 188 SDLIHKSEAHPNL 200 >gi|330444455|ref|YP_004377441.1| DNA replication and repair protein recF [Chlamydophila pecorum E58] gi|328807565|gb|AEB41738.1| DNA replication and repair protein recF [Chlamydophila pecorum E58] Length = 358 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++ + + +FR + + ++ FA + ++G N GK++L EA+ L G + R +H Sbjct: 1 MKIVSLTLKNFRSYKD-TEVSFAPRVNYISGSNAQGKTNLLEALYILSLGRSFRTQH 56 >gi|210623667|ref|ZP_03293976.1| hypothetical protein CLOHIR_01926 [Clostridium hiranonis DSM 13275] gi|210153432|gb|EEA84438.1| hypothetical protein CLOHIR_01926 [Clostridium hiranonis DSM 13275] Length = 1172 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +EI + Q I+F L + G+ G GKS++ +AI YG R Sbjct: 1 MRPIKLEIKGLNSYVNKQTIDFEKLTERGLFGIFGKTGSGKSTILDAITLSLYGSIARNT 60 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKY 107 + I S K + + +Y Sbjct: 61 -KEYINSLSEKAEISYEFEIGSRRY 84 >gi|156382738|ref|XP_001632709.1| predicted protein [Nematostella vectensis] gi|156219769|gb|EDO40646.1| predicted protein [Nematostella vectensis] Length = 1221 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +R+ + I +F+ + +Q++ F + + G NG GKS++ +A+ ++F GY + Sbjct: 9 SREPRLMITKIVNENFKSYAGVQELGPFHKSFSSIVGPNGSGKSNVIDAMLFVF-GYRSK 67 Query: 81 RKHGDSIKKRSIKTPMPMCMA 101 + + + +A Sbjct: 68 MIRTKKVSQLIHNSSAHPNVA 88 >gi|146320789|ref|YP_001200500.1| hypothetical protein SSU98_0942 [Streptococcus suis 98HAH33] gi|145691595|gb|ABP92100.1| hypothetical protein SSU98_0942 [Streptococcus suis 98HAH33] Length = 556 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + I++FR F + Q I F D T++ G N GK+++ +A+ Sbjct: 1 MKLTKVIINNFRSFGDSQVIGFNDQ-TVLIGNNSSGKTTVLQAL 43 >gi|146318589|ref|YP_001198301.1| hypothetical protein SSU05_0935 [Streptococcus suis 05ZYH33] gi|253751713|ref|YP_003024854.1| hypothetical protein SSUSC84_0840 [Streptococcus suis SC84] gi|253755573|ref|YP_003028713.1| hypothetical protein SSUBM407_0968 [Streptococcus suis BM407] gi|145689395|gb|ABP89901.1| hypothetical protein SSU05_0935 [Streptococcus suis 05ZYH33] gi|251816002|emb|CAZ51619.1| hypothetical protein SSUSC84_0840 [Streptococcus suis SC84] gi|251818037|emb|CAZ55826.1| hypothetical protein SSUBM407_0968 [Streptococcus suis BM407] Length = 695 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + I++FR F + Q I F D T++ G N GK+++ +A+ Sbjct: 1 MKLTKVIINNFRSFGDSQVIGFNDQ-TVLIGNNSSGKTTVLQAL 43 >gi|20978622|sp|Q96YR5|RAD50_SULTO RecName: Full=DNA double-strand break repair rad50 ATPase Length = 879 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKHGDS 86 + I+I +F + IEF + ++ G NG GKSS+ +AI + + + R +K D Sbjct: 3 IRRIDIENFLSH-DRSLIEFKGTVNVIIGHNGAGKSSIIDAISFSLFRKSLRDAKKQEDL 61 Query: 87 IKK 89 IK+ Sbjct: 62 IKR 64 >gi|332521002|ref|ZP_08397462.1| DNA replication and repair protein RecF [Lacinutrix algicola 5H-3-7-4] gi|332043532|gb|EGI79728.1| DNA replication and repair protein RecF [Lacinutrix algicola 5H-3-7-4] Length = 359 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F + + EF D + + G NG GK+++ +AI L +G + Sbjct: 3 LKSLSLLNYKNF-DSKTFEFNDTINCLVGNNGVGKTNVLDAIYHLSFGKS 51 >gi|329945023|ref|ZP_08292973.1| exonuclease SbcCD, C subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328529484|gb|EGF56388.1| exonuclease SbcCD, C subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 1146 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + ++ + + ++F A ++ G G GK+++ +AI + YG Sbjct: 1 MRIHSLTMTGIGPYAGREHVDFDAVGASGRFLLTGPTGSGKTTIIDAIVFALYGDVADSA 60 Query: 83 HGDSIKKRS 91 + RS Sbjct: 61 DSSKERIRS 69 >gi|311067551|ref|YP_003972474.1| DNA ATP-dependent repair enzyme [Bacillus atrophaeus 1942] gi|310868068|gb|ADP31543.1| DNA ATP-dependent repair enzyme [Bacillus atrophaeus 1942] Length = 1130 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIALTIKGLHSFREEQTIDFDGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|294792394|ref|ZP_06757541.1| DNA replication and repair protein RecF [Veillonella sp. 6_1_27] gi|294456293|gb|EFG24656.1| DNA replication and repair protein RecF [Veillonella sp. 6_1_27] Length = 366 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + + +I+F + ++ G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKD-VQIQFNPEIIVLYGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNVEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|119192414|ref|XP_001246813.1| hypothetical protein CIMG_00584 [Coccidioides immitis RS] Length = 744 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G G Sbjct: 430 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKGG 489 Query: 86 SIKKRSIKT 94 + KT Sbjct: 490 AFIHDPKKT 498 >gi|331004232|ref|ZP_08327711.1| hypothetical protein HMPREF0491_02573 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411505|gb|EGG90916.1| hypothetical protein HMPREF0491_02573 [Lachnospiraceae oral taxon 107 str. F0167] Length = 921 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S F + + +F L ++ G G GK+++ +AI + YG Sbjct: 1 MRPIKLTVSAFGPYAGKTEFDFDKLGTGGLYLITGDTGAGKTTIFDAITYALYGDPSGNN 60 Query: 83 HGDSIKKRSI 92 S+ + Sbjct: 61 REVSMFRSKY 70 >gi|327353571|gb|EGE82428.1| nuclear condensin complex subunit Smc2 [Ajellomyces dermatitidis ATCC 18188] Length = 1176 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|289577486|ref|YP_003476113.1| SMC domain protein [Thermoanaerobacter italicus Ab9] gi|289527199|gb|ADD01551.1| SMC domain protein [Thermoanaerobacter italicus Ab9] Length = 1177 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 7/88 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + IS F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLRISGLNSFVEEQVIDFERLTERGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 H---GDSIKKRSIKTPMPMCMAVPRCKY 107 + S+ + + R +Y Sbjct: 61 REFINTNSISTSVSYEFEIGIGAERKRY 88 >gi|239608544|gb|EEQ85531.1| nuclear condensin complex subunit Smc2 [Ajellomyces dermatitidis ER-3] Length = 1197 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|167746203|ref|ZP_02418330.1| hypothetical protein ANACAC_00908 [Anaerostipes caccae DSM 14662] gi|167654196|gb|EDR98325.1| hypothetical protein ANACAC_00908 [Anaerostipes caccae DSM 14662] Length = 843 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L +EIS + + +I+F+ L ++ G G GK+++ +A+ + YG Sbjct: 1 MKPLFLEISAWGPYAGKNQIDFSKFQGGLFLITGPTGSGKTTIFDALTYALYGEVSGSVR 60 Query: 84 GDSIKKRSIKTPMP 97 + + Sbjct: 61 TKESLRSDFASQKE 74 >gi|146421124|ref|XP_001486513.1| hypothetical protein PGUG_02184 [Meyerozyma guilliermondii ATCC 6260] Length = 1183 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q I F + V G NG GKS++ +++ ++F + + G Sbjct: 139 ISQLVLTNFKSYAGQQVIGPFNASFSAVVGPNGSGKSNVIDSMLFVFGFRALKMRQG 195 >gi|319941564|ref|ZP_08015890.1| hypothetical protein HMPREF9464_01109 [Sutterella wadsworthensis 3_1_45B] gi|319804934|gb|EFW01776.1| hypothetical protein HMPREF9464_01109 [Sutterella wadsworthensis 3_1_45B] Length = 1117 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +LL + I + +I+F + + + G G GK+++ +A+ +G T R Sbjct: 1 MRLLKLRIENINSLAGRYEIDFTNRDYIESGIFAIVGPTGSGKTTILDAVTLALFGKTPR 60 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPRC 105 + S K++ + M + +C Sbjct: 61 METRTSTSKKTDRGCMVLTEGRKQC 85 >gi|261191993|ref|XP_002622404.1| nuclear condensin complex subunit Smc2 [Ajellomyces dermatitidis SLH14081] gi|239589720|gb|EEQ72363.1| nuclear condensin complex subunit Smc2 [Ajellomyces dermatitidis SLH14081] Length = 1179 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|160944371|ref|ZP_02091599.1| hypothetical protein FAEPRAM212_01881 [Faecalibacterium prausnitzii M21/2] gi|158444153|gb|EDP21157.1| hypothetical protein FAEPRAM212_01881 [Faecalibacterium prausnitzii M21/2] Length = 666 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + FR F Q + F+ ++T++ G N +GK+++ +A W YG Sbjct: 1 MLIHSISMHDFRQFKGTQTLSFSCDKEKNVTVLLGDNTFGKTTILQAFNWCLYG 54 >gi|156742186|ref|YP_001432315.1| DNA replication and repair protein RecF [Roseiflexus castenholzii DSM 13941] gi|189039636|sp|A7NF69|RECF_ROSCS RecName: Full=DNA replication and repair protein recF gi|156233514|gb|ABU58297.1| DNA replication and repair protein RecF [Roseiflexus castenholzii DSM 13941] Length = 394 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E + +T++ G N GK+++ EAI +L + R Sbjct: 1 MYVTHLSLRDFRNY-ERLDLNLEPGVTLLYGPNAAGKTTVLEAIYFLATTRSPRAGADRE 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|312877256|ref|ZP_07737224.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795970|gb|EFR12331.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 369 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + I +F+ + + Q +I+F++ + + G+NG GKSS++EAI W +G +R Sbjct: 1 MRPLFLRIENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFER 56 >gi|312136567|ref|YP_004003904.1| smc domain protein [Methanothermus fervidus DSM 2088] gi|311224286|gb|ADP77142.1| SMC domain protein [Methanothermus fervidus DSM 2088] Length = 865 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL +E+ + R + + +K+EF D +T+ G G GKS++ AIE+ +G Sbjct: 1 MKLKSLELKNIRSY-KYEKLEFNDGVTLFEGDIGSGKSTILLAIEFALFG 49 >gi|115774659|ref|XP_797583.2| PREDICTED: similar to XCAP-C [Strongylocentrotus purpuratus] gi|115964743|ref|XP_001183157.1| PREDICTED: similar to XCAP-C [Strongylocentrotus purpuratus] Length = 1289 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY + + Sbjct: 103 ITQIMTENFKSYAGKVVLGPFHKSFSCIIGPNGSGKSNVIDSMLFVF-GYRAAKIRSKKL 161 Query: 88 KKRSIKTP 95 K+ Sbjct: 162 SVLIHKSE 169 >gi|291521104|emb|CBK79397.1| DNA replication and repair protein RecF [Coprococcus catus GD/7] Length = 365 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + + + + + I G N GK+++ EA+ + R Sbjct: 1 MYVESLALENYRNYVHL-SVNLSPGINIFFGDNAQGKTNVLEALYMCATTKSHRGSRDRE 59 Query: 87 IKKRSIK 93 I + + Sbjct: 60 IIRFGEE 66 >gi|317470619|ref|ZP_07930005.1| exonuclease SbcC [Anaerostipes sp. 3_2_56FAA] gi|316901910|gb|EFV23838.1| exonuclease SbcC [Anaerostipes sp. 3_2_56FAA] Length = 843 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L +EIS + + +I+F+ L ++ G G GK+++ +A+ + YG Sbjct: 1 MKPLFLEISAWGPYAGKNQIDFSKFQGGLFLITGPTGSGKTTIFDALTYALYGEVSGSVR 60 Query: 84 GDSIKKRSIKTPMP 97 + + Sbjct: 61 TKESLRSDFASQKE 74 >gi|313234652|emb|CBY10607.1| unnamed protein product [Oikopleura dioica] Length = 1130 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + + +F T+ K F + G NG GKS++ A+ +F G T + D + Sbjct: 28 IVSLTLENFMS-TDNTKYPFNPTTNYIFGANGTGKSTIVAALFLIFDGRTAKLGRADDL 85 >gi|315047560|ref|XP_003173155.1| chromosomes protein 4 structural maintenance [Arthroderma gypseum CBS 118893] gi|311343541|gb|EFR02744.1| chromosomes protein 4 structural maintenance [Arthroderma gypseum CBS 118893] Length = 1430 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + Q + F + V G NG GKS++ +++ ++F + + G Sbjct: 224 MVITHLVLTNFKSYAGQQFVGPFHASFSSVVGPNGSGKSNVIDSLLFVFGFRASKMRQG 282 >gi|296131554|ref|YP_003638801.1| DNA replication and repair protein RecF [Thermincola sp. JR] gi|296030132|gb|ADG80900.1| DNA replication and repair protein RecF [Thermincola potens JR] Length = 368 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +FR + + + F D L + G N GK+++ EAI + G + R Sbjct: 1 MLIDKIALLNFRNY-QTLTLSFHDKLNLFVGDNAQGKTNILEAIYYSGTGRSHRTNKDAD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|307243596|ref|ZP_07525741.1| exonuclease SbcCD, C subunit [Peptostreptococcus stomatis DSM 17678] gi|306493037|gb|EFM65045.1| exonuclease SbcCD, C subunit [Peptostreptococcus stomatis DSM 17678] Length = 1026 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +EI + Q I+F + + + G+ G GKS++ +A+ YG R Sbjct: 1 MKPIRLEIDGINSYASKQVIDFERLTSRGIFGIFGKTGSGKSTILDAMTLALYGNIARGS 60 Query: 83 H---GDSIKKRSIKTPMPMCMAVPRCKYQL 109 + K SI + + R +Y + Sbjct: 61 KEFINSNRDKASISYTFELGLGQDRVRYMV 90 >gi|225018153|ref|ZP_03707345.1| hypothetical protein CLOSTMETH_02090 [Clostridium methylpentosum DSM 5476] gi|224949150|gb|EEG30359.1| hypothetical protein CLOSTMETH_02090 [Clostridium methylpentosum DSM 5476] Length = 939 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KLL +++S F F Q+++F + +++G G GK+++ +A+ + YG T + Sbjct: 1 MKLLSLKLSAFGPFKTEQQLDFSCLEGADIFLISGDTGAGKTTIFDAVCFALYGETSGGR 60 Query: 83 HGDSIKKRSIKTPMPMC 99 K P C Sbjct: 61 KNTRTLKSDFAPPSQQC 77 >gi|209881510|ref|XP_002142193.1| hypothetical protein [Cryptosporidium muris RN66] gi|209557799|gb|EEA07844.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 1092 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS R FT + I+F +T++ G NG GK+++ E ++ G Sbjct: 4 LEKLIISGIRSFTPDRREAIQFDHPITLIVGPNGSGKTTIIECLKVSVTG 53 >gi|124004298|ref|ZP_01689144.1| hypothetical protein M23134_05740 [Microscilla marina ATCC 23134] gi|123990368|gb|EAY29867.1| hypothetical protein M23134_05740 [Microscilla marina ATCC 23134] Length = 696 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I++ +F+ + Q++ F ++ +V G NGYGK++L ++ W YG + Sbjct: 1 MNIQKIKLYNFKIYAGDQQLTFDYKSQSHRNVFVVAGSNGYGKTTLLTSLVWCLYGKLMQ 60 Query: 81 RKHGDSIKKRSIK 93 D K++ I+ Sbjct: 61 EV-DDIFKRQIIE 72 >gi|113475797|ref|YP_721858.1| hypothetical protein Tery_2151 [Trichodesmium erythraeum IMS101] gi|110166845|gb|ABG51385.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 690 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+ I + +FR F + TI++G NG GK+++ A W+ Y Sbjct: 1 MKLVSIILCNFRQFYGKTPEIICASGKQNTTIIHGNNGAGKTTIMNAFTWVLYE 54 >gi|224008570|ref|XP_002293244.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971370|gb|EED89705.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1403 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 29 LLDIEISHFRGFT---EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + I R F+ E Q I F LTI+ G NG GK+++ E++++ G Sbjct: 4 ISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGS 55 >gi|308198054|ref|XP_001386802.2| DNA repair protein [Scheffersomyces stipitis CBS 6054] gi|149388833|gb|EAZ62779.2| DNA repair protein [Pichia stipitis CBS 6054] Length = 1306 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I R F + I+F LT++ GQNG GK+++ E ++++ G G + Sbjct: 4 LFKLSIKGIRSFEPENEETIQFGFPLTLICGQNGCGKTTIIECLKYVTTGDLPPNSKGGA 63 Query: 87 IKKRSIKTPMPM 98 + P+ Sbjct: 64 FVNDPSISGRPV 75 >gi|124009358|ref|ZP_01694036.1| DNA replication and repair protein RecF [Microscilla marina ATCC 23134] gi|123985020|gb|EAY24971.1| DNA replication and repair protein RecF [Microscilla marina ATCC 23134] Length = 372 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + +F+ + E+ ++F+ + + G NG GK++L +AI +L Sbjct: 1 MFLEKINLLNFKNY-EMLDLDFSSSVNCIVGDNGSGKTNLLDAIHYL 46 >gi|288929747|ref|ZP_06423590.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] gi|288328848|gb|EFC67436.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] Length = 681 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +I I +FR F E I F + + ++ G N GKS+L A+ + R Sbjct: 1 MYIKEINILNFRSFKE-ALIPFHEGVNVIIGHNNTGKSNLLRAMGLVLSYSNGHRL 55 >gi|227534367|ref|ZP_03964416.1| exonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187984|gb|EEI68051.1| exonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 1041 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F + + ++F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MQLKQLHMQFFGPYADAV-VDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGER 59 Query: 83 HGDSIK 88 G+ ++ Sbjct: 60 DGEQMR 65 >gi|160936148|ref|ZP_02083521.1| hypothetical protein CLOBOL_01044 [Clostridium bolteae ATCC BAA-613] gi|158440958|gb|EDP18682.1| hypothetical protein CLOBOL_01044 [Clostridium bolteae ATCC BAA-613] Length = 991 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + ++ IS F + ++ A L ++ G G GK++L +AI + YG Sbjct: 6 MRPTELIISAFGPYAGEVTLDMASLGDRGLYLITGDTGAGKTTLFDAIAFALYGNASGDS 65 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 66 RKPRMLRSKYARP 78 >gi|260904979|ref|ZP_05913301.1| recombination protein F [Brevibacterium linens BL2] Length = 374 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + E+ +EF +T NG GK+++ EAI +L + + R Sbjct: 1 MWISRLSLRNYRSYPELD-LEFEPGVTTFVADNGTGKTNIVEAIGYLAHLRSHRVAFDAP 59 Query: 87 IKKRSIKT 94 + S +T Sbjct: 60 LVNESAQT 67 >gi|295662104|ref|XP_002791606.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226279732|gb|EEH35298.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1179 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|167621944|ref|YP_001672238.1| recombination protein F [Shewanella halifaxensis HAW-EB4] gi|189039642|sp|B0TLA6|RECF_SHEHH RecName: Full=DNA replication and repair protein recF gi|167351966|gb|ABZ74579.1| DNA replication and repair protein RecF [Shewanella halifaxensis HAW-EB4] Length = 365 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR + + +++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLHIETFRNIS-LAQLDPGDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|126238208|gb|ABO07415.1| SMC1 [Solanum lycopersicum] Length = 263 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 36 HFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI-- 92 +F+ + Q I F D T + G NG GKS+L +AI ++ T + G +K Sbjct: 1 NFKSYKGFQTIGPFYD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGAQLKDLIYAF 58 Query: 93 ---KTPMPMCMAVPRCKYQL 109 + A R YQL Sbjct: 59 DDREKEQRGRRAFVRLIYQL 78 >gi|116750248|ref|YP_846935.1| SMC domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699312|gb|ABK18500.1| SMC domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1020 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 10/72 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---- 78 + L + +S F + Q +F +++G G GKS+L +A+ + YG T Sbjct: 1 MRPLKLTLSAFGPYASEQVFDFRVLGDRSFFLIHGPTGSGKSTLLDAVCFALYGETSGGE 60 Query: 79 --QRRKHGDSIK 88 R D + Sbjct: 61 RDVRHLRSDYAR 72 >gi|313206051|ref|YP_004045228.1| DNA sulfur modification protein dndd [Riemerella anatipestifer DSM 15868] gi|312445367|gb|ADQ81722.1| DNA sulfur modification protein DndD [Riemerella anatipestifer DSM 15868] gi|315022364|gb|EFT35392.1| DNA repair ATPase [Riemerella anatipestifer RA-YM] Length = 705 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +IE+++FR + I KI ++ +V+G+NG+GK++ ++ W YG + Sbjct: 1 MFIKEIELNNFRIYKGINKINLLPQDGKNIIVVSGKNGFGKTTFLMSLVWCLYGKQMEKV 60 Query: 83 HGDSIKKRSIK 93 K+ + K Sbjct: 61 DELYQKEIADK 71 >gi|297193293|ref|ZP_06910691.1| recombination protein F [Streptomyces pristinaespiralis ATCC 25486] gi|297151726|gb|EDY62300.2| recombination protein F [Streptomyces pristinaespiralis ATCC 25486] Length = 286 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 13 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGANGQGKTNLVEAVGYLATLASHRVSSDAP 71 Query: 87 IKKRSIK 93 + + Sbjct: 72 LVRMGAD 78 >gi|195027447|ref|XP_001986594.1| GH20438 [Drosophila grimshawi] gi|193902594|gb|EDW01461.1| GH20438 [Drosophila grimshawi] Length = 1307 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + I R F ++Q I F+ +T++ GQNG GK+++ E I++ Sbjct: 4 IEKLSIQGVRSFGANAEDMQSITFSSPITLILGQNGCGKTTIIECIKYALTSQ 56 >gi|56694881|ref|YP_164391.1| hypothetical protein BCBBV1cgp13 [Bacillus phage BCJA1c] gi|52631308|gb|AAU85060.1| 13 [Bacillus phage BCJA1c] Length = 434 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +EI + + ++ + LT++ G NG GK+S +AI W G R Sbjct: 1 MIKINKLEIENIKRVKAVKIEPSPNGLTVIGGGNGQGKTSTLDAIAWALGGNKYR 55 >gi|290962103|ref|YP_003493285.1| exonuclease [Streptomyces scabiei 87.22] gi|260651629|emb|CBG74753.1| putative exonuclease [Streptomyces scabiei 87.22] Length = 997 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L ++I+ F F Q ++F D L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGGAQSVDFDDLSAAGLFLLHGPTGAGKTSILDAVCYALYG 54 >gi|240279089|gb|EER42594.1| SMC2 protein [Ajellomyces capsulatus H143] Length = 229 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|239930172|ref|ZP_04687125.1| recombination protein F [Streptomyces ghanaensis ATCC 14672] gi|291438514|ref|ZP_06577904.1| RecF protein [Streptomyces ghanaensis ATCC 14672] gi|291341409|gb|EFE68365.1| RecF protein [Streptomyces ghanaensis ATCC 14672] Length = 373 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYP-RVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRVGAD 66 >gi|238018742|ref|ZP_04599168.1| hypothetical protein VEIDISOL_00586 [Veillonella dispar ATCC 17748] gi|237865213|gb|EEP66503.1| hypothetical protein VEIDISOL_00586 [Veillonella dispar ATCC 17748] Length = 1027 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F + + +++G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNELQAHSMFLISGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPDRM 76 >gi|124009672|ref|ZP_01694344.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123984722|gb|EAY24707.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 696 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I++ +F+ + Q++ F ++ +V G NGYGK++L ++ W YG + Sbjct: 1 MNIQKIKLYNFKIYAGDQQLTFDYKSQSHRNVFVVAGSNGYGKTTLLTSLVWCLYGKLMQ 60 Query: 81 RKHGDSIKKRSIK 93 D K++ I+ Sbjct: 61 EV-DDIFKRQIIE 72 >gi|89897383|ref|YP_520870.1| hypothetical protein DSY4637 [Desulfitobacterium hafniense Y51] gi|89336831|dbj|BAE86426.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 708 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++I ++R F + +IEF++ L ++ G+N GK+++ +A++ F G G Sbjct: 39 MYISRLKIQNYRCFQD-VEIEFSEGLNVIIGENNCGKTTILKALQCFFKGSNTGSAMG 95 >gi|307594762|ref|YP_003901079.1| SMC domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307549963|gb|ADN50028.1| SMC domain protein [Vulcanisaeta distributa DSM 14429] Length = 803 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +EI +FR + + + + ++G NG GK+S+ EAI YG G Sbjct: 2 ITKVEIENFRSIMRGKAV-ITEGINFIHGPNGSGKTSILEAIAIALYGS--EWVRGKY-- 56 Query: 89 KRSIKTPMPMCMAVPRCKY 107 + S AV R +Y Sbjct: 57 RLSDLVRRGASSAVIRLEY 75 >gi|269958391|ref|YP_003328178.1| recombination protein F [Anaplasma centrale str. Israel] gi|269848220|gb|ACZ48864.1| recombination protein F [Anaplasma centrale str. Israel] Length = 371 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR +T ++E ++ G+NG GK+++ EAI L G R D ++ Sbjct: 9 IQSIKLCNFRNYT-RAELETHGCSVVLLGKNGSGKTNILEAISLLSKGPGLRNVSADCMQ 67 Query: 89 KRSIKTP 95 TP Sbjct: 68 NHESGTP 74 >gi|195165821|ref|XP_002023737.1| GL19756 [Drosophila persimilis] gi|194105871|gb|EDW27914.1| GL19756 [Drosophila persimilis] Length = 232 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|325089375|gb|EGC42685.1| condensin subunit [Ajellomyces capsulatus H88] Length = 315 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|307260453|ref|ZP_07542148.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869856|gb|EFN01638.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 367 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + I++FR + +E + + + G NG GK+SL EA+ +L +G + + Sbjct: 6 IFMPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAVFYLGHGRSFKS 61 >gi|322836795|ref|YP_004210709.1| hypothetical protein AciX9_4652 [Acidobacterium sp. MP5ACTX9] gi|321165882|gb|ADW71582.1| hypothetical protein AciX9_4652 [Acidobacterium sp. MP5ACTX9] Length = 617 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKH 83 + L + I +FR E + F L I+ G N GK+++ +A+ L G+ + R Sbjct: 8 VVYLSQLTIRNFRKL-ERVDVSFQSGLNILVGPNNVGKTAVIDALRALLGGHDEPLPRLS 66 Query: 84 GDSIKKR 90 D + + Sbjct: 67 SDDLFRS 73 >gi|238028388|ref|YP_002912619.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia glumae BGR1] gi|237877582|gb|ACR29915.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia glumae BGR1] Length = 607 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E + AD LT G+N GKSS+ EA+E F T + + GD+ Sbjct: 1 MRLESVSIKNFRCYREETTVSMAD-LTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDA 59 Query: 87 IKKRS 91 Sbjct: 60 NIYSG 64 >gi|294655197|ref|XP_002770099.1| DEHA2B07920p [Debaryomyces hansenii CBS767] gi|199429762|emb|CAR65469.1| DEHA2B07920p [Debaryomyces hansenii] Length = 1395 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +++F+ + +Q I F + V G NG GKS++ +++ ++F + + G Sbjct: 172 IDKLVLTNFKSYAGVQVIGPFNASFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 228 >gi|307211956|gb|EFN87868.1| DNA repair protein RAD50 [Harpegnathos saltator] Length = 1371 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 28 KLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + R F + + + F+ +T++ G NG GK+++ EA+++ G Sbjct: 3 KIRRLSVRGIRNFGDDNEDALLRFSCPMTLILGPNGTGKTTIIEALKYATTG 54 >gi|212640052|ref|YP_002316572.1| DNA repair ATPase SbcC [Anoxybacillus flavithermus WK1] gi|212561532|gb|ACJ34587.1| ATPase involved in DNA repair, SbcC [Anoxybacillus flavithermus WK1] Length = 1119 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + I+ F + + I+F L + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIRLTIAGLHSFRQKETIDFEKLCEGGLFGIFGPTGSGKSSILDAMTLALYGNVER 58 >gi|146422673|ref|XP_001487272.1| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260] Length = 1302 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F + IEF LT++ GQNG GK+++ E +++ G Sbjct: 4 LYKLSIQGVRSFDSESSETIEFGFPLTLICGQNGCGKTTIIECLKYATTG 53 >gi|46107656|ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1] Length = 1976 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + IS R F+ + I+F LT++ G NG GK+++ E +++ G G Sbjct: 3 RIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|315107495|gb|EFT79471.1| recombination protein F [Propionibacterium acnes HL030PA1] Length = 401 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 8 MFVEHLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|256789102|ref|ZP_05527533.1| exonuclease [Streptomyces lividans TK24] Length = 310 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L ++I+ F F Q ++F D L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGASQSVDFDDLSAAGLFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|226289610|gb|EEH45094.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1179 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|225682237|gb|EEH20521.1| condensin subunit Cut14 [Paracoccidioides brasiliensis Pb03] Length = 1179 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I F+ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|221308903|ref|ZP_03590750.1| hypothetical protein Bsubs1_05891 [Bacillus subtilis subsp. subtilis str. 168] gi|221313227|ref|ZP_03595032.1| hypothetical protein BsubsN3_05822 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318150|ref|ZP_03599444.1| hypothetical protein BsubsJ_05771 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322425|ref|ZP_03603719.1| hypothetical protein BsubsS_05877 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767245|ref|NP_388946.2| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. subtilis str. 168] gi|239938853|sp|O06714|SBCC_BACSU RecName: Full=Nuclease sbcCD subunit C gi|225184872|emb|CAB12905.2| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. subtilis str. 168] Length = 1130 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|153825831|ref|ZP_01978498.1| nuclease sbcCD subunit C [Vibrio cholerae MZO-2] gi|149740431|gb|EDM54554.1| nuclease sbcCD subunit C [Vibrio cholerae MZO-2] Length = 1013 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Query: 30 LDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L + + F F ++I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 4 LKLMLQAFGPFAGREEIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTG 63 Query: 86 SIKKRSIKTPMPM 98 + P + Sbjct: 64 DQMRCDYAAPESL 76 >gi|50841500|ref|YP_054727.1| recombination protein F [Propionibacterium acnes KPA171202] gi|81612508|sp|Q6ABL2|RECF_PROAC RecName: Full=DNA replication and repair protein recF gi|50839102|gb|AAT81769.1| DNA replication and repair protein RecF [Propionibacterium acnes KPA171202] Length = 394 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 1 MFVEHLELVDFRSYV-RADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRLGADQ 67 >gi|21219807|ref|NP_625586.1| exonuclease [Streptomyces coelicolor A3(2)] gi|14575557|emb|CAC42847.1| putative exonuclease [Streptomyces coelicolor A3(2)] Length = 999 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L ++I+ F F Q ++F D L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGASQSVDFDDLSAAGLFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|83273857|ref|XP_729582.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23487793|gb|EAA21147.1| protein mix-1, putative [Plasmodium yoelii yoelii] Length = 1227 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + I F + G NG GKS++ +AI ++ + Sbjct: 1 MHIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 RLDELIYKQ 69 >gi|156363816|ref|XP_001626236.1| predicted protein [Nematostella vectensis] gi|156213105|gb|EDO34136.1| predicted protein [Nematostella vectensis] Length = 1073 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I FR + + IE F+ ++ G+NG GKS+ AI+++ + Sbjct: 1 VIIQGFRSYRDQTIIEPFSSKHNVIVGRNGSGKSNFFFAIQFVLSADEFSNLRQE 55 >gi|329941553|ref|ZP_08290818.1| exonuclease [Streptomyces griseoaurantiacus M045] gi|329299270|gb|EGG43170.1| exonuclease [Streptomyces griseoaurantiacus M045] Length = 997 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L ++I+ F F + Q I+F A L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGDTQSIDFDALSAAGLFLLHGPTGAGKTSVLDAVCYALYG 54 >gi|313676601|ref|YP_004054597.1| DNA replication and repair protein recf [Marivirga tractuosa DSM 4126] gi|312943299|gb|ADR22489.1| DNA replication and repair protein RecF [Marivirga tractuosa DSM 4126] Length = 367 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 KL +I ++ F+ + + F D + G+NG GK++L +AI +L + + Sbjct: 4 MKLQNIRLAQFKNYPQAN-FSFVDGINCFLGRNGIGKTNLLDAIYYLAFTKSA 55 >gi|291446406|ref|ZP_06585796.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291349353|gb|EFE76257.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 815 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L +E+S RG K+ F ++ G+NG GKS++ +AIE+ G R Sbjct: 244 VRLRSVELSALRGAPGRLKLTFGKKSSPSSALIFGENGTGKSTIVDAIEFALQGRIGRSA 303 Query: 83 HGDS 86 H DS Sbjct: 304 HYDS 307 >gi|114568719|ref|YP_755399.1| hypothetical protein Mmar10_0165 [Maricaulis maris MCS10] gi|114339181|gb|ABI64461.1| conserved hypothetical protein [Maricaulis maris MCS10] Length = 595 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L IEI +F+G + Q I+ A +T++ G N GKS++ +A+ ++ Sbjct: 1 MRLTRIEIENFKGIGKRQVIDLAP-ITLLFGPNSAGKSTVLQALHYV 46 >gi|88813026|ref|ZP_01128268.1| recombination protein F [Nitrococcus mobilis Nb-231] gi|88789659|gb|EAR20784.1| recombination protein F [Nitrococcus mobilis Nb-231] Length = 357 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ FR + + + G N GK+SL EAI WL G + H D Sbjct: 1 MTLARIEVEAFRNLRGVVLTP-DPRVNFIWGNNASGKTSLLEAIHWLARGRSFLSVHSDQ 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LIRQGCR 66 >gi|303250482|ref|ZP_07336679.1| recombination protein F [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251524|ref|ZP_07533431.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256024|ref|ZP_07537812.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302650470|gb|EFL80629.1| recombination protein F [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860988|gb|EFM92994.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865446|gb|EFM97341.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 360 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKSHISNR 59 Query: 87 IKKRSIK 93 I + Sbjct: 60 IINYQSE 66 >gi|303251824|ref|ZP_07337995.1| recombination protein F [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249126|ref|ZP_07531133.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649254|gb|EFL79439.1| recombination protein F [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854414|gb|EFM86610.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 360 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKSHISNR 59 Query: 87 IKKRSIK 93 I + Sbjct: 60 IINYQSE 66 >gi|226325592|ref|ZP_03801110.1| hypothetical protein COPCOM_03405 [Coprococcus comes ATCC 27758] gi|225205716|gb|EEG88070.1| hypothetical protein COPCOM_03405 [Coprococcus comes ATCC 27758] Length = 238 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + + F IQK++F +T G+NG GKS+L EA+ + +G+ + + + Sbjct: 22 LKRIKAFKGIQKLDFNKAITFFVGENGSGKSTLLEALA-VAHGFNPEGGTKNYV-FSTHD 79 Query: 94 TPMPMCMAV 102 T +C A+ Sbjct: 80 THSELCDAI 88 >gi|221056346|ref|XP_002259311.1| structural maintenance of chromosome protein [Plasmodium knowlesi strain H] gi|193809382|emb|CAQ40084.1| structural maintenance of chromosome protein,putative [Plasmodium knowlesi strain H] Length = 1620 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 S +Y +L F + + + +F+ + I T + G NG GKS++ + I ++ Sbjct: 233 SSVAYRENELCF-IKYLVVCNFKSYEGENIIGPFSKFTAIIGPNGSGKSNIMDCICFVL- 290 Query: 76 GYTQRRKHGDSIKKR 90 G + S+K+ Sbjct: 291 GIHNKCLRVKSMKQL 305 >gi|172056361|ref|YP_001812821.1| AAA ATPase [Exiguobacterium sibiricum 255-15] gi|171988882|gb|ACB59804.1| AAA ATPase [Exiguobacterium sibiricum 255-15] Length = 437 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +I + +F GF E I F+D T++ G NG GK+++ + + Y Sbjct: 3 IKEITMKNFHGFKERH-ITFSDQFTVLVGNNGTGKTAVLDGLAVALGSY 50 >gi|317509429|ref|ZP_07967047.1| DNA replication and repair protein RecF [Segniliparus rugosus ATCC BAA-974] gi|316252258|gb|EFV11710.1| DNA replication and repair protein RecF [Segniliparus rugosus ATCC BAA-974] Length = 411 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ EI FR + E + + T+ G+NGYGK++L EA+ L + R + Sbjct: 1 MRVSSFEIRDFRSW-EHASLRLGEGSTLFLGRNGYGKTNLVEALGVLSSLSSHRGAQTAA 59 Query: 87 IKKRS 91 + +R Sbjct: 60 MVRRG 64 >gi|251777825|ref|ZP_04820745.1| gp49 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082140|gb|EES48030.1| gp49 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 655 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL +E+ +F+G E+ + F +T + G+NG GKS++ + WL +G K Sbjct: 1 MIKLKKLELKNFKGIKELT-VTFGT-VTTILGENGTGKSTIFDGFNWLLFGKDSHDKKD 57 >gi|157959833|ref|YP_001499867.1| recombination protein F [Shewanella pealeana ATCC 700345] gi|189039643|sp|A8GYE5|RECF_SHEPA RecName: Full=DNA replication and repair protein recF gi|157844833|gb|ABV85332.1| DNA replication and repair protein RecF [Shewanella pealeana ATCC 700345] Length = 360 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR + +++ D L ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLSRLHIESFRNISS-AQLQPGDGLNLIYGHNGSGKTSILEAIYFLGMGRSFRS 54 >gi|329764872|ref|ZP_08256463.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138658|gb|EGG42903.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 1152 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 F L ++G NG GKS++ +AI + + D ++ Sbjct: 2 FEPGLVSISGPNGSGKSNILDAIIFALGENKPKMMRVDKLR 42 >gi|325479825|gb|EGC82910.1| exonuclease SbcCD, C subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 1012 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + F + + I+F+ + +V+G G GK+S+ +AI + YG R Sbjct: 1 MRPKRLIMRGFITYKDKVDIDFSKLYDKKIFLVSGDTGSGKTSIFDAISFALYGKVARNI 60 Query: 83 HGDSIK 88 D ++ Sbjct: 61 TSDRLR 66 >gi|260584260|ref|ZP_05852007.1| DNA replication and repair protein RecF [Granulicatella elegans ATCC 700633] gi|260157778|gb|EEW92847.1| DNA replication and repair protein RecF [Granulicatella elegans ATCC 700633] Length = 369 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L++++++HFR + E +EF + I G+N GK++L E+I L + R Sbjct: 1 MRLVELQLNHFRNY-EELFLEFGKGVHIFIGENAQGKTNLMESIYTLAMTKSHRTNQDRE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 LIMWNEDT 67 >gi|190344796|gb|EDK36551.2| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260] Length = 1302 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F + IEF LT++ GQNG GK+++ E +++ G Sbjct: 4 LYKLSIQGVRSFDSESSETIEFGFPLTLICGQNGCGKTTIIECLKYATTG 53 >gi|52078495|ref|YP_077286.1| recombination protein F [Bacillus licheniformis ATCC 14580] gi|52783859|ref|YP_089688.1| recombination protein F [Bacillus licheniformis ATCC 14580] gi|81691262|sp|Q65PL9|RECF_BACLD RecName: Full=DNA replication and repair protein recF gi|52001706|gb|AAU21648.1| DNA repair RecF [Bacillus licheniformis ATCC 14580] gi|52346361|gb|AAU38995.1| RecF [Bacillus licheniformis ATCC 14580] Length = 370 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ +S +R + E ++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNLTLSSYRNY-ERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|120599371|ref|YP_963945.1| SMC domain-containing protein [Shewanella sp. W3-18-1] gi|120559464|gb|ABM25391.1| SMC domain protein [Shewanella sp. W3-18-1] Length = 1018 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q+++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQQLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKRSI 92 S + + Sbjct: 61 REGSQMRCDV 70 >gi|323497159|ref|ZP_08102179.1| DNA repair exonuclease [Vibrio sinaloensis DSM 21326] gi|323317734|gb|EGA70725.1| DNA repair exonuclease [Vibrio sinaloensis DSM 21326] Length = 1013 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K L + + F F Q+I+F ++ L ++NG G GK+S+ +A+ + YG T Sbjct: 1 MKPLKLTMQAFGPFANQQEIDFTSLGSNPLFLINGPTGSGKTSILDAMSFALYGET 56 >gi|317123181|ref|YP_004097293.1| DNA replication and repair protein RecF [Intrasporangium calvum DSM 43043] gi|315587269|gb|ADU46566.1| DNA replication and repair protein RecF [Intrasporangium calvum DSM 43043] Length = 424 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + I F+ +T + G NG GK++L EAI +L + R Sbjct: 1 MHVRHLTLKDFRSYPGAE-IAFSPGVTTLIGLNGQGKTNLVEAIGYLATLGSHRVAADQP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRFGASQ 67 >gi|170594123|ref|XP_001901813.1| rad50 family protein [Brugia malayi] gi|158590757|gb|EDP29372.1| rad50 family protein [Brugia malayi] Length = 1329 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L IE+ R IEF LTI+ G NG GK+++ EA++++ G + Sbjct: 38 LDTIELQGIRSVGVGPQNANVIEFLSPLTIICGPNGAGKTTIIEALKYVTTGELPKG 94 >gi|156098811|ref|XP_001615421.1| structural maintenance of chromosome protein [Plasmodium vivax SaI-1] gi|148804295|gb|EDL45694.1| structural maintenance of chromosome protein, putative [Plasmodium vivax] Length = 1613 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 Y + + + + +F+ + I T + G NG GKS++ + I ++ G + Sbjct: 222 YRENELCSIKYLVVCNFKSYEGENIIGPFSKFTAIIGPNGSGKSNIMDCICFVL-GIPNK 280 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 S++ + R K +K Sbjct: 281 CLRVKSMRHLIHHKENEKVEVLKRRKCYVK 310 >gi|321314790|ref|YP_004207077.1| DNA ATP-dependent repair enzyme [Bacillus subtilis BSn5] gi|320021064|gb|ADV96050.1| DNA ATP-dependent repair enzyme [Bacillus subtilis BSn5] Length = 1130 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|291483549|dbj|BAI84624.1| hypothetical protein BSNT_01815 [Bacillus subtilis subsp. natto BEST195] Length = 1130 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|284028003|ref|YP_003377934.1| DNA replication and repair protein RecF [Kribbella flavida DSM 17836] gi|283807296|gb|ADB29135.1| DNA replication and repair protein RecF [Kribbella flavida DSM 17836] Length = 379 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + ++E +T G NG+GK++L EAI + + R Sbjct: 1 MYVTALGLLDFRSY-QQAEVELTPGVTAFVGPNGHGKTNLVEAIHYTATLGSHRVATDAP 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQ 108 + + P + R +Y+ Sbjct: 60 LVRAG--APRAIVRTEVRGQYE 79 >gi|167766565|ref|ZP_02438618.1| hypothetical protein CLOSS21_01071 [Clostridium sp. SS2/1] gi|167711688|gb|EDS22267.1| hypothetical protein CLOSS21_01071 [Clostridium sp. SS2/1] Length = 927 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +S F F E I+F D + +++G+ G GK+++ + I + YG Sbjct: 1 MRPQKLILSAFGPFAEETVIDFTRFKDGIFLISGETGAGKTTIFDGICFALYGEPSGSYR 60 Query: 84 GDSIKKR 90 + + Sbjct: 61 KQDMLRS 67 >gi|66043686|ref|YP_233527.1| hypothetical protein Psyr_0419 [Pseudomonas syringae pv. syringae B728a] gi|63254393|gb|AAY35489.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 421 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + F Sbjct: 1 MRLDRLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFG 48 >gi|325968969|ref|YP_004245161.1| SMC domain protein [Vulcanisaeta moutnovskia 768-28] gi|323708172|gb|ADY01659.1| SMC domain protein [Vulcanisaeta moutnovskia 768-28] Length = 803 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH---GD 85 + +EI +FR + + + + ++G NG GK+S+ EAI YG R GD Sbjct: 2 ITRVEIENFRSIIRGKAV-ITEGINFIHGPNGSGKTSILEAIAIALYGSEWVRGKYRLGD 60 Query: 86 SIKK 89 +++ Sbjct: 61 LVRR 64 >gi|294794660|ref|ZP_06759796.1| putative nuclease sbcCD subunit C [Veillonella sp. 3_1_44] gi|294454990|gb|EFG23363.1| putative nuclease sbcCD subunit C [Veillonella sp. 3_1_44] Length = 1027 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F + + ++ G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNELQDHSMFLIAGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPHRM 76 >gi|251798598|ref|YP_003013329.1| exonuclease [Paenibacillus sp. JDR-2] gi|247546224|gb|ACT03243.1| exonuclease, putative [Paenibacillus sp. JDR-2] Length = 1030 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 10/93 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY----- 77 + L I ++ F + + + ++F++ L +++G G GK+++ +AI + YG Sbjct: 1 MRPLKITMTAFGPYRDAETVDFSELGEHRLFVISGSTGAGKTTIFDAICFALYGTASGED 60 Query: 78 -TQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 ++ R T + + AV R Y++ Sbjct: 61 RSEPRMLRSHFADDEKHTAVELDFAVGRRMYRV 93 >gi|269798432|ref|YP_003312332.1| DNA repair ATPase-like protein [Veillonella parvula DSM 2008] gi|269095061|gb|ACZ25052.1| ATPase involved in DNA repair-like protein [Veillonella parvula DSM 2008] Length = 1027 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F + + ++ G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNELQDHSMFLIAGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPHRM 76 >gi|241955237|ref|XP_002420339.1| condensin complex subunit, putative; structural maintenance of chromosomes protein, putative [Candida dubliniensis CD36] gi|223643681|emb|CAX41414.1| condensin complex subunit, putative [Candida dubliniensis CD36] Length = 1368 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++ F+ + + I F + V G NG GKS++ +++ ++F + + G Sbjct: 147 IDRLVLTDFKSYAGKKVIGPFHSSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 203 >gi|195114514|ref|XP_002001812.1| GI14952 [Drosophila mojavensis] gi|193912387|gb|EDW11254.1| GI14952 [Drosophila mojavensis] Length = 1396 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I ++++ ++F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 72 SMESVGPRLIIKRIVN---NNFKSYAGEVELGPFHHSFTAIIGPNGSGKSNVIDSMMFVF 128 Query: 75 Y 75 Sbjct: 129 G 129 >gi|34763238|ref|ZP_00144200.1| EXONUCLEASE SBCC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887091|gb|EAA24200.1| EXONUCLEASE SBCC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 921 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + IEF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHS-NTTIEFTKGINLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|193214559|ref|YP_001995758.1| DNA replication and repair protein RecF [Chloroherpeton thalassium ATCC 35110] gi|226737776|sp|B3QWU7|RECF_CHLT3 RecName: Full=DNA replication and repair protein recF gi|193088036|gb|ACF13311.1| DNA replication and repair protein RecF [Chloroherpeton thalassium ATCC 35110] Length = 368 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW-LFYGYTQRRKHGD 85 KL + I FR + + D + ++ G+NG GK++L EAI + D Sbjct: 1 MKLFKLSIHGFRSHQDAVFLP-HDGINLIYGKNGTGKTNLLEAIHYTCLTKSFLSTSDSD 59 Query: 86 SIKKRS 91 ++ ++ Sbjct: 60 ALHFQA 65 >gi|187932800|ref|YP_001886968.1| hypothetical protein CLL_A2780 [Clostridium botulinum B str. Eklund 17B] gi|187720953|gb|ACD22174.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund 17B] Length = 656 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL +E+ +F+G ++ + F +T + G+NG GKS++ + WL +G Sbjct: 1 MIKLKKLELKNFKGIKDLT-VTFGT-VTTILGENGTGKSTIFDGFNWLLFG 49 >gi|162453954|ref|YP_001616321.1| hypothetical protein sce5678 [Sorangium cellulosum 'So ce 56'] gi|161164536|emb|CAN95841.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 900 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 23 RKLIFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 R+ I ++ + +S+FRG+ T +I+ L ++ G NG GKSSL +A+ G Sbjct: 225 RRFIERVHKVNLSNFRGWCGTNEHEIDVDADLVLLTGANGQGKSSLLQAVMLALTGDGVD 284 Query: 81 RKHGDSIKKRS 91 D ++ R Sbjct: 285 S--PDDMRPRQ 293 >gi|332652835|ref|ZP_08418580.1| putative SbcC exonuclease family protein [Ruminococcaceae bacterium D16] gi|332517981|gb|EGJ47584.1| putative SbcC exonuclease family protein [Ruminococcaceae bacterium D16] Length = 1097 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + ++ L ++ G G GK+++ +AI + YG Sbjct: 1 MRPLKLTVSAFGPYAGKVVMDLEKLGKQGLYLITGDTGAGKTTIFDAITYALYGEPSGEN 60 Query: 83 HGDSIKKRSIKTP 95 S+ + P Sbjct: 61 RDPSMFRSKYAQP 73 >gi|313892951|ref|ZP_07826528.1| exonuclease SbcCD, C subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313442304|gb|EFR60719.1| exonuclease SbcCD, C subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 1027 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F+ + +++G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFSALQDHSMFLISGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPERM 76 >gi|307129197|ref|YP_003881213.1| hypothetical protein Dda3937_01331 [Dickeya dadantii 3937] gi|306526726|gb|ADM96656.1| hypothetical protein Dda3937_01331 [Dickeya dadantii 3937] Length = 393 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I++++F F + L ++ G NG GKS+L EAIE Sbjct: 9 IKSIQLTNFLSFGASTQPIELKALNVIVGPNGSGKSNLLEAIE 51 >gi|271499011|ref|YP_003332036.1| SMC domain-containing protein [Dickeya dadantii Ech586] gi|270342566|gb|ACZ75331.1| SMC domain protein [Dickeya dadantii Ech586] Length = 386 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I++++F F + L ++ G NG GKS+L EAIE Sbjct: 2 IKSIQLTNFLSFGASTQPIELKALNVIVGPNGSGKSNLLEAIE 44 >gi|251791211|ref|YP_003005932.1| SMC domain-containing protein [Dickeya zeae Ech1591] gi|247539832|gb|ACT08453.1| SMC domain protein [Dickeya zeae Ech1591] Length = 386 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I++++F F + L ++ G NG GKS+L EAIE Sbjct: 2 IKSIQLTNFLSFGASTQPIELKALNVIVGPNGSGKSNLLEAIE 44 >gi|229526561|ref|ZP_04415965.1| hypothetical protein VCA_000689 [Vibrio cholerae bv. albensis VL426] gi|229336719|gb|EEO01737.1| hypothetical protein VCA_000689 [Vibrio cholerae bv. albensis VL426] Length = 542 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGY----TQR 80 +L +++ +RGF E I F+ ++T++ G NG GKSS+ +AI+ + + R Sbjct: 62 LRLASLKLIGYRGF-ESLDITFSQKSNITVLVGNNGSGKSSILDAIQKSLTHFVSRLSTR 120 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPRCK 106 +GD + + I +P K Sbjct: 121 SYNGDQLDELDISNGATFVTVIPEFK 146 >gi|238567301|ref|XP_002386215.1| hypothetical protein MPER_15628 [Moniliophthora perniciosa FA553] gi|215437499|gb|EEB87145.1| hypothetical protein MPER_15628 [Moniliophthora perniciosa FA553] Length = 74 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F + F ++ + G NG GKS++ AI G T G +K Sbjct: 8 IESIEMHQFMCHKSL-SFNFGPNINFIIGHNGSGKSAVLSAITVALGGKTNSTGRGSGLK 66 >gi|325839897|ref|ZP_08166940.1| exonuclease SbcCD, C subunit [Turicibacter sp. HGF1] gi|325490424|gb|EGC92744.1| exonuclease SbcCD, C subunit [Turicibacter sp. HGF1] Length = 1043 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 11/87 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-----IVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + ++I+ F + + ++ F + L ++ G G GK+++ +AI + YG T Sbjct: 1 MKPISLKITAFGPYAKQTELNFKEDLKNQDIFVITGPTGAGKTTIFDAICYALYGETSGN 60 Query: 82 ------KHGDSIKKRSIKTPMPMCMAV 102 D KT + +V Sbjct: 61 KRKGEELRSDFAASSDNKTEVEFTFSV 87 >gi|29833598|ref|NP_828232.1| exonuclease [Streptomyces avermitilis MA-4680] gi|29610722|dbj|BAC74767.1| putative ATP-dependent dsDNA exonuclease [Streptomyces avermitilis MA-4680] Length = 999 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L ++I+ F F Q ++F D L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGGAQTVDFDDLSAAGLFLLHGPTGAGKTSVLDAVCYALYG 54 >gi|310780029|ref|YP_003968361.1| SMC domain protein [Ilyobacter polytropus DSM 2926] gi|309749352|gb|ADO84013.1| SMC domain protein [Ilyobacter polytropus DSM 2926] Length = 1005 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +EI + F E Q I+F L + G+ G GKS++ +A+ YG R Sbjct: 1 MRPIKLEIQGLQSFNEKQTIDFETLTEHGLFGIFGETGSGKSTILDALTLALYGNVVR 58 >gi|293376379|ref|ZP_06622615.1| exonuclease SbcCD, C subunit [Turicibacter sanguinis PC909] gi|292645009|gb|EFF63083.1| exonuclease SbcCD, C subunit [Turicibacter sanguinis PC909] Length = 1043 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 11/87 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-----IVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + ++I+ F + + ++ F + L ++ G G GK+++ +AI + YG T Sbjct: 1 MKPISLKITAFGPYAKQTELNFKEDLKNQDIFVITGPTGAGKTTIFDAICYALYGETSGN 60 Query: 82 ------KHGDSIKKRSIKTPMPMCMAV 102 D KT + +V Sbjct: 61 KRKGEELRSDFAASSDNKTEVEFTFSV 87 >gi|254569540|ref|XP_002491880.1| Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells [Pichia pastoris GS115] gi|238031677|emb|CAY69600.1| Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells [Pichia pastoris GS115] Length = 1207 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I + + +V G+NG GKS+ AI ++ Sbjct: 1 MYIKRIVIQGFKTYKNTTIIEDISPEYNVVVGRNGSGKSNFFAAIRFVL 49 >gi|300853236|ref|YP_003778220.1| putative DNA replication and repair protein RecF [Clostridium ljungdahlii DSM 13528] gi|300433351|gb|ADK13118.1| predicted DNA replication and repair protein RecF [Clostridium ljungdahlii DSM 13528] Length = 366 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E++ +EF +L + G N GK+++ E+I + G + R Sbjct: 1 MYIKYLKLINFRNYKELE-MEFDKNLNVFIGDNAQGKTNILESIYYCSIGKSPRTNKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|227500428|ref|ZP_03930490.1| exonuclease SbcC [Anaerococcus tetradius ATCC 35098] gi|227217491|gb|EEI82810.1| exonuclease SbcC [Anaerococcus tetradius ATCC 35098] Length = 1011 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ F + + +I+F + +++G G GK+S+ +AI + YG R Sbjct: 1 MRPRRLKLRGFITYKDTIEIDFTKLYDKKIFLISGDTGSGKTSIFDAISFALYGNVARDI 60 Query: 83 HGDSIK 88 D ++ Sbjct: 61 SSDRLR 66 >gi|170761015|ref|YP_001785814.1| exonuclease SbcC [Clostridium botulinum A3 str. Loch Maree] gi|169408004|gb|ACA56415.1| exonuclease SbcCD, C subunit [Clostridium botulinum A3 str. Loch Maree] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|118590458|ref|ZP_01547860.1| recombination protein F [Stappia aggregata IAM 12614] gi|118436921|gb|EAV43560.1| recombination protein F [Stappia aggregata IAM 12614] Length = 382 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ FR ++ + + + G NG GK+++ EAI +L G RR I Sbjct: 8 QLTRLSLTGFRNYSALT-LPLTAKMAAFVGPNGAGKTNILEAISFLTAGRGLRRAALADI 66 Query: 88 KKRSIK 93 ++ Sbjct: 67 ARKGGD 72 >gi|20091072|ref|NP_617147.1| hypothetical protein MA2232 [Methanosarcina acetivorans C2A] gi|19916167|gb|AAM05627.1| predicted protein [Methanosarcina acetivorans C2A] Length = 487 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Query: 29 LLDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSEAIE 71 + I+I FRGF E Q+++ LT++ G N GKS++ EA + Sbjct: 2 ISSIKIKGFRGFAEEQELKLSIPDGKKGSGLTVIVGPNNGGKSTIIEAFK 51 >gi|291301498|ref|YP_003512776.1| SMC domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570718|gb|ADD43683.1| SMC domain protein [Stackebrandtia nassauensis DSM 44728] Length = 810 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L +++ F F++ ++F + G G GKS++ +AI + YG R G Sbjct: 1 MRPLRLDMEGFGTFSKPTTVDFTGADFFALIGPTGAGKSTVLDAICFALYGRVPRWGSG 59 >gi|50745053|ref|XP_419962.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 1096 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 S SLTS I + I++ +F + + +F +L + G NG GKSS+ A+ Sbjct: 43 SFSLTSTVGEAGI--IESIQLKNFMCHSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVG 100 Query: 74 FYGYTQRRKHGDSIK 88 G G S+K Sbjct: 101 LGGKATATNRGSSLK 115 >gi|189346831|ref|YP_001943360.1| SMC domain protein [Chlorobium limicola DSM 245] gi|189340978|gb|ACD90381.1| SMC domain protein [Chlorobium limicola DSM 245] Length = 1223 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F +D + + G G GK+++ +AI YG T R Sbjct: 1 MKILSLRFKNLNSLAGEWFIDFTAPEYVSDGIFAITGPTGSGKTTILDAISLALYGQTPR 60 >gi|329938635|ref|ZP_08288031.1| DNA recombination and repair protein RecF [Streptomyces griseoaurantiacus M045] gi|329302126|gb|EGG46018.1| DNA recombination and repair protein RecF [Streptomyces griseoaurantiacus M045] Length = 373 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-HVEVPLDAGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|328707330|ref|XP_003243363.1| PREDICTED: structural maintenance of chromosomes protein 4-like isoform 2 [Acyrthosiphon pisum] gi|328707332|ref|XP_001948250.2| PREDICTED: structural maintenance of chromosomes protein 4-like isoform 1 [Acyrthosiphon pisum] Length = 1358 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +I ++F+ + I +F LT + G NG GKS++ +++ ++F + + Sbjct: 67 MVITEIVANNFKSYFGEVTIGKFHKSLTSIVGANGSGKSNVIDSLLFVFGYRSSK 121 >gi|322804754|emb|CBZ02306.1| exonuclease SbcC [Clostridium botulinum H04402 065] Length = 1178 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 3 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 60 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 61 --DSTQFINLDT 70 >gi|255535366|ref|YP_003095737.1| DNA repair ATPase [Flavobacteriaceae bacterium 3519-10] gi|255341562|gb|ACU07675.1| ATPase involved in DNA repair [Flavobacteriaceae bacterium 3519-10] Length = 699 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ I+ +FR + +I F+ + ++I+ G+NG+GK++ ++ W+FYG Sbjct: 1 MKINRIKFQNFRIYKGENEILFSPNPSKNISIIAGKNGFGKTTFLTSLIWVFYGKMMNEV 60 Query: 83 HGDSIKK 89 K Sbjct: 61 EDKYKKD 67 >gi|242021385|ref|XP_002431125.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212516374|gb|EEB18387.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1206 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MYIKQVIIQGFKSYREQTVVEPFDHRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|195579640|ref|XP_002079669.1| GD21899 [Drosophila simulans] gi|194191678|gb|EDX05254.1| GD21899 [Drosophila simulans] Length = 1136 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESKGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y--GYTQRRKHGDSIKKRSIKTP 95 R K ++ S P Sbjct: 136 GCRANRIRCKRVSTLIHSSSSYP 158 >gi|148378476|ref|YP_001253017.1| exonuclease SbcC [Clostridium botulinum A str. ATCC 3502] gi|153934038|ref|YP_001382865.1| exonuclease SbcC [Clostridium botulinum A str. ATCC 19397] gi|153934920|ref|YP_001386431.1| exonuclease SbcC [Clostridium botulinum A str. Hall] gi|148287960|emb|CAL82026.1| exonuclease [Clostridium botulinum A str. ATCC 3502] gi|152930082|gb|ABS35582.1| exonuclease SbcCD, C subunit [Clostridium botulinum A str. ATCC 19397] gi|152930834|gb|ABS36333.1| exonuclease SbcCD, C subunit [Clostridium botulinum A str. Hall] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|57234648|ref|YP_181293.1| exonuclease SbcC, putative [Dehalococcoides ethenogenes 195] gi|57225096|gb|AAW40153.1| exonuclease SbcC, putative [Dehalococcoides ethenogenes 195] Length = 859 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++I +F + EI F H + GQNG GKS+L +AI W +G ++ + D + Sbjct: 5 KLKIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDDDVVS 64 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 + + + + YQ+ Sbjct: 65 LNEQEAEVSLDFEISGELYQV 85 >gi|226314561|ref|YP_002774457.1| nuclease sbcCD subunit C [Brevibacillus brevis NBRC 100599] gi|226097511|dbj|BAH45953.1| putative nuclease sbcCD subunit C [Brevibacillus brevis NBRC 100599] Length = 1216 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + ++++ + E+Q+++F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLKLAGMHSYREMQEVDFEVLCQAGLFGIFGPTGSGKSTILDAITLALYGQVVRLG 60 Query: 83 HGDSIKK 89 G+ K+ Sbjct: 61 GGNHPKE 67 >gi|326777766|ref|ZP_08237031.1| SMC domain protein [Streptomyces cf. griseus XylebKG-1] gi|326658099|gb|EGE42945.1| SMC domain protein [Streptomyces cf. griseus XylebKG-1] Length = 814 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L I + +RG +++ LT+V G NG GKSSL+EA E G+ R Sbjct: 50 VYLRSIAAAGWRGVGPETRLDLPNGPGLTVVTGGNGTGKSSLAEAAEIALTGFNARWDGS 109 Query: 85 DSIKKRSI 92 + K+R++ Sbjct: 110 NGGKRRAV 117 >gi|261334825|emb|CBH17819.1| RAD50 DNA repair-like protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1349 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + IEIS R F Q+I F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEQIEISGVRSFDPNPNNRQRIVFKKPLTVILGKNGAGKTTIIEALLNACTGQ 56 >gi|153939045|ref|YP_001389843.1| exonuclease SbcC [Clostridium botulinum F str. Langeland] gi|152934941|gb|ABS40439.1| exonuclease SbcC [Clostridium botulinum F str. Langeland] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR 58 >gi|111025894|ref|YP_708314.1| hypothetical protein RHA1_ro09113 [Rhodococcus jostii RHA1] gi|110824873|gb|ABH00156.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 1143 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 27/42 (64%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 ++ + + ++ G+ +I+F+ T+++G +G GKS+L +A Sbjct: 19 RIESMHLLNWGGYDGYHRIDFSPGSTMISGPSGVGKSTLMDA 60 >gi|332027315|gb|EGI67399.1| Structural maintenance of chromosomes protein 4 [Acromyrmex echinatior] Length = 1451 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +R +I K+++ +F+ + I F + + G NG GKS++ +++ ++F GY Sbjct: 57 SRLMIAKIVN---ENFKSYAGTHIIGPFQKSFSAIVGPNGSGKSNVIDSMLFVF-GYRAS 112 Query: 81 RKHGDSI 87 + I Sbjct: 113 KIRSKKI 119 >gi|298485964|ref|ZP_07004038.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159441|gb|EFI00488.1| Chromosome partition protein smc [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 597 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +F+G + +E +T+V G NG GKSSL EAI + K GD Sbjct: 14 MKIESIYIENFQGLS-NANLELTAPITMVCGHNGAGKSSLKEAIGLALGEAARVAKKGDY 72 >gi|169857604|ref|XP_001835450.1| hypothetical protein CC1G_05412 [Coprinopsis cinerea okayama7#130] gi|116503523|gb|EAU86418.1| hypothetical protein CC1G_05412 [Coprinopsis cinerea okayama7#130] Length = 1149 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + F E EF + + G NG GKS++ A+ G T G +K Sbjct: 110 IEAVHMVDFMCH-EKLSFEFGPQINFIIGHNGSGKSAVLTALVIALGGKTAATGRGTGLK 168 >gi|94313563|ref|YP_586772.1| ATP-dependent endonuclease [Cupriavidus metallidurans CH34] gi|93357415|gb|ABF11503.1| ATP-dependent endonuclease of the OLD family-like protein [Cupriavidus metallidurans CH34] Length = 626 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I +FR ++ I F D +T G NG GKS++ A++W F G Sbjct: 1 MKIQTVRIRNFRTLKDVT-IPF-DSVTTFIGPNGAGKSTVLRALDWFFNG 48 >gi|313640122|gb|EFS04741.1| DNA replication and repair protein RecF [Listeria seeligeri FSL S4-171] Length = 370 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MLLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|313635494|gb|EFS01731.1| DNA replication and repair protein RecF [Listeria seeligeri FSL N1-067] Length = 370 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MLLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPMP 97 I + M Sbjct: 60 FIMWEKEEAKME 71 >gi|294786217|ref|ZP_06751471.1| RecF protein [Parascardovia denticolens F0305] gi|315225747|ref|ZP_07867535.1| recombination protein F [Parascardovia denticolens DSM 10105] gi|294485050|gb|EFG32684.1| RecF protein [Parascardovia denticolens F0305] gi|315119879|gb|EFT83011.1| recombination protein F [Parascardovia denticolens DSM 10105] Length = 405 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +R + ++ + ++ G NG GK+++ EA+E+L G + R + Sbjct: 1 MYLSRLILDDYRSWP-HCLVDLTPGVNVLVGHNGLGKTNIMEAVEFLSTGGSHRVRSSQP 59 Query: 87 IKKRSIK 93 + ++ K Sbjct: 60 LVRQGAK 66 >gi|294792898|ref|ZP_06758045.1| putative exonuclease SbcC [Veillonella sp. 6_1_27] gi|294456797|gb|EFG25160.1| putative exonuclease SbcC [Veillonella sp. 6_1_27] Length = 1027 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + + ++F + + ++ G G GK+S+ +A+ + YG Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNELQNHAMFLIAGPTGAGKTSILDAMVYALYGEPSGEV 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P M Sbjct: 61 RKTDAIRSDFAEPHRM 76 >gi|254419522|ref|ZP_05033246.1| RecF/RecN/SMC N terminal domain, putative [Brevundimonas sp. BAL3] gi|196185699|gb|EDX80675.1| RecF/RecN/SMC N terminal domain, putative [Brevundimonas sp. BAL3] Length = 377 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + ++E A +++G NG GK++L EAI L G + G + Sbjct: 2 ITSLTLTDFRSYAS-ARLELASGPVVLHGPNGAGKTNLLEAISLLTPG---KGLRGATAA 57 Query: 89 KRSIKTPMP 97 + + P Sbjct: 58 EMGRREPGE 66 >gi|168177818|ref|ZP_02612482.1| exonuclease SbcC [Clostridium botulinum NCTC 2916] gi|182671357|gb|EDT83331.1| exonuclease SbcC [Clostridium botulinum NCTC 2916] Length = 1180 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|163751110|ref|ZP_02158340.1| exonuclease SbcC, putative [Shewanella benthica KT99] gi|161329066|gb|EDQ00138.1| exonuclease SbcC, putative [Shewanella benthica KT99] Length = 1018 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F ++ +FA + L ++NG G GK++L +AI + YG T + Sbjct: 1 MRPLKLVMSAFGPFASTEETDFAALGTNPLFLINGPTGAGKTTLLDAICFALYGKTTGDE 60 Query: 83 HGDSIKKR-----SIKTPMPMCMAVPRCKYQLK 110 S + S+ T + A+ +Y+++ Sbjct: 61 REGSQMRCDLAVDSLLTEVTFSFALGDIQYRIR 93 >gi|86159644|ref|YP_466429.1| ATP-dependent OLD family endonuclease [Anaeromyxobacter dehalogenans 2CP-C] gi|85776155|gb|ABC82992.1| ATP-dependent endonuclease of the OLD family-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 615 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L ++++ FR F + F + LT++ G+N GK+++ EA+ Sbjct: 1 MYLSSLQLTRFRSFRDGTVY-FDETLTVLAGENNSGKTNVLEALR 44 >gi|323496668|ref|ZP_08101719.1| RecF/RecN/SMC family protein [Vibrio sinaloensis DSM 21326] gi|323318250|gb|EGA71210.1| RecF/RecN/SMC family protein [Vibrio sinaloensis DSM 21326] Length = 542 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE----WLFYGYTQRRK 82 +L + +S+FR F ++ ++F + LT++ G NG GK+S ++A+ W + Sbjct: 63 LRLNSLSLSNFRRFDDLC-LDFDEKLTVIIGDNGAGKTSFADAMANIFSWFNNNLEKDSV 121 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQL 109 +G+ +K I A C ++L Sbjct: 122 NGNFVKLSDINI-KATDYAELTCNFKL 147 >gi|226947709|ref|YP_002802800.1| exonuclease SbcCD, C subunit [Clostridium botulinum A2 str. Kyoto] gi|226843084|gb|ACO85750.1| exonuclease SbcCD, C subunit [Clostridium botulinum A2 str. Kyoto] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|195344564|ref|XP_002038851.1| GM17160 [Drosophila sechellia] gi|194133981|gb|EDW55497.1| GM17160 [Drosophila sechellia] Length = 1409 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y--GYTQRRKHGDSIKKRSIKTP 95 R K ++ S P Sbjct: 136 GCRANRIRCKRVSTLIHSSSSYP 158 >gi|170755486|ref|YP_001780126.1| exonuclease SbcC [Clostridium botulinum B1 str. Okra] gi|169120698|gb|ACA44534.1| exonuclease SbcCD, C subunit [Clostridium botulinum B1 str. Okra] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR 58 >gi|168181345|ref|ZP_02616009.1| exonuclease SbcCD, C subunit [Clostridium botulinum Bf] gi|237793799|ref|YP_002861351.1| exonuclease SbcCD subunit C [Clostridium botulinum Ba4 str. 657] gi|182675422|gb|EDT87383.1| exonuclease SbcCD, C subunit [Clostridium botulinum Bf] gi|229261518|gb|ACQ52551.1| exonuclease SbcCD, C subunit [Clostridium botulinum Ba4 str. 657] Length = 1176 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|157373149|ref|YP_001471749.1| DNA replication and repair protein RecF [Shewanella sediminis HAW-EB3] gi|189039644|sp|A8FP48|RECF_SHESH RecName: Full=DNA replication and repair protein recF gi|157315523|gb|ABV34621.1| DNA replication and repair protein RecF [Shewanella sediminis HAW-EB3] Length = 360 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR T Q + + + ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLHIETFRNITSAQLLP-GEGINLIYGHNGSGKTSILEAIYFLGMGRSFRS 54 >gi|71755961|ref|XP_828895.1| RAD50 DNA repair-like protein [Trypanosoma brucei TREU927] gi|70834281|gb|EAN79783.1| RAD50 DNA repair-like protein [Trypanosoma brucei] Length = 1349 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + IEIS R F Q+I F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEQIEISGVRSFDPNPNNRQRIVFKKPLTVILGKNGAGKTTIIEALLNACTGQ 56 >gi|290968611|ref|ZP_06560149.1| exonuclease SbcCD, C subunit [Megasphaera genomosp. type_1 str. 28L] gi|290781264|gb|EFD93854.1| exonuclease SbcCD, C subunit [Megasphaera genomosp. type_1 str. 28L] Length = 1014 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+ F + E Q I+F L ++ G G GK+++ +A+ + YG T + + Sbjct: 6 LEMQAFGPYAEKQVIDFRKLGTRRLFLICGPTGAGKTTVLDAMCYALYGDTSGNRRSGTH 65 Query: 88 KKRSIKTP 95 + P Sbjct: 66 MRSEYAAP 73 >gi|282863406|ref|ZP_06272465.1| SMC domain protein [Streptomyces sp. ACTE] gi|282561741|gb|EFB67284.1| SMC domain protein [Streptomyces sp. ACTE] Length = 840 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 R L + L+ + I F+G T +F +TI++G NG GKSS+S+ I G + Sbjct: 78 RGLSWDLVSLRIEGFQGATVPFSFQFDPTPGVTILHGPNGSGKSSISDGIRTALSGRS 135 >gi|302924127|ref|XP_003053819.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256734760|gb|EEU48106.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 1955 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + IS R F+ + I+F LT++ G NG GK+++ E +++ G G Sbjct: 3 KIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|238882443|gb|EEQ46081.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1368 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++ F+ + + I F + V G NG GKS++ +++ ++F + + G Sbjct: 149 IDRLVLTDFKSYAGKKVIGPFHSSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 205 >gi|262173695|ref|ZP_06041372.1| exonuclease SbcC [Vibrio mimicus MB-451] gi|261891053|gb|EEY37040.1| exonuclease SbcC [Vibrio mimicus MB-451] Length = 1013 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLTLQAFGPFPGREVIDFTELGDAPLFLINGPTGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|159470203|ref|XP_001693249.1| DNA repair protein [Chlamydomonas reinhardtii] gi|158277507|gb|EDP03275.1| DNA repair protein [Chlamydomonas reinhardtii] Length = 1410 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I I R F+ + IEF LTI+ G NG GK+++ EA+ G Sbjct: 4 VEKILIKGIRSFSPTNEYIIEFYKPLTIIVGSNGAGKTTIIEALRNATTG 53 >gi|322513483|ref|ZP_08066593.1| recombination protein F [Actinobacillus ureae ATCC 25976] gi|322120702|gb|EFX92586.1| recombination protein F [Actinobacillus ureae ATCC 25976] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR I +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSID-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|320094121|ref|ZP_08025934.1| hypothetical protein HMPREF9005_0546 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978923|gb|EFW10453.1| hypothetical protein HMPREF9005_0546 [Actinomyces sp. oral taxon 178 str. F0338] Length = 456 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L E+S F+ E ++F T + G N GKS+L +AIE+L Sbjct: 2 LTRFEVSGFKNL-ENVSVDFGP-FTCIAGPNSVGKSNLFDAIEFL 44 >gi|167957125|ref|ZP_02544199.1| DNA replication and repair protein RecF [candidate division TM7 single-cell isolate TM7c] Length = 347 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +E+ + R E++ + + +T++ G+NG GK++L EA+ G + R D Sbjct: 1 MDITHLEVRNLRSH-ELESRDITERVTVIIGKNGSGKTTLLEALYIALRGTSFRGSDND 58 >gi|68478241|ref|XP_716862.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|68478362|ref|XP_716802.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46438486|gb|EAK97816.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46438548|gb|EAK97877.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] Length = 1368 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + ++ F+ + + I F + V G NG GKS++ +++ ++F + + G Sbjct: 149 IDRLVLTDFKSYAGKKVIGPFHSSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQG 205 >gi|304440344|ref|ZP_07400233.1| SMC protein family protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371096|gb|EFM24713.1| SMC protein family protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 435 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F+ + ++F + L ++ G++ GK+++ AI+W Y GD Sbjct: 3 YIKKVHLINFQSHAD-SILDFEEGLNVILGRSDSGKTAVIRAIKWALYNEP----RGDYF 57 Query: 88 KKRSIK 93 + K Sbjct: 58 VRIGEK 63 >gi|320009753|gb|ADW04603.1| DNA replication and repair protein RecF [Streptomyces flavogriseus ATCC 33331] Length = 376 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ +T G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLDPGVTAFVGANGQGKTNLVEAVGYLATLGSHRVSSDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRMGAE 66 >gi|2145364|emb|CAA70670.1| YirY [Bacillus subtilis] Length = 289 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|152977691|ref|YP_001343320.1| recombination protein F [Actinobacillus succinogenes 130Z] gi|171472900|sp|A6VK88|RECF_ACTSZ RecName: Full=DNA replication and repair protein recF gi|150839414|gb|ABR73385.1| DNA replication and repair protein RecF [Actinobacillus succinogenes 130Z] Length = 358 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + I +FR +EF + G NG GK+SL E+I +L +G + + Sbjct: 1 MAISRLIIENFRNLAA-VDLEFDHGFNFLVGNNGSGKTSLLESIFYLGHGRSFKS 54 >gi|326916539|ref|XP_003204564.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Meleagris gallopavo] Length = 1096 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 S SLTS I + I++ +F + + +F +L + G NG GKSS+ A+ Sbjct: 43 SFSLTSTVGEAGI--IERIQLKNFMCHSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVG 100 Query: 74 FYGYTQRRKHGDSIK 88 G G S+K Sbjct: 101 LGGKATATNRGSSLK 115 >gi|195059330|ref|XP_001995612.1| GH17849 [Drosophila grimshawi] gi|193896398|gb|EDV95264.1| GH17849 [Drosophila grimshawi] Length = 1200 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRR 81 + I I F+ + + +E F +V G+NG GKS+ AI+++ +T +R Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHQR 57 >gi|307249202|ref|ZP_07531199.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858726|gb|EFM90785.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|307244804|ref|ZP_07526903.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253758|ref|ZP_07535612.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258215|ref|ZP_07539958.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854249|gb|EFM86455.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863242|gb|EFM95182.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867675|gb|EFM99520.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|253574624|ref|ZP_04851964.1| SMC domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845670|gb|EES73678.1| SMC domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 213 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + ++++ + + E+Q I+F + L + G G GKS++ +AI YG R Sbjct: 1 MKPITLKLAGLQSYREMQTIDFTELCETGLFGIFGPTGSGKSTILDAITLALYGKVGRAS 60 Query: 83 HG 84 G Sbjct: 61 GG 62 >gi|195953147|ref|YP_002121437.1| SMC domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932759|gb|ACG57459.1| SMC domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 961 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E+ F + E ++F+D L + G G GK+++ +AI + YG R + G Sbjct: 1 MRPLVLELEGFLSYKEKTVVDFSDLSLFAITGMTGAGKTTIIDAITFALYGKCPRFEKGA 60 Query: 86 S 86 S Sbjct: 61 S 61 >gi|190149272|ref|YP_001967797.1| DNA replication and repair protein RecF [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262583|ref|ZP_07544214.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226737764|sp|B3GZJ3|RECF_ACTP7 RecName: Full=DNA replication and repair protein recF gi|189914403|gb|ACE60655.1| DNA replication and repair protein RecF [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306872081|gb|EFN03794.1| DNA replication and repair protein recF [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|165975460|ref|YP_001651053.1| recombination protein F [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226737765|sp|B0BRG1|RECF_ACTPJ RecName: Full=DNA replication and repair protein recF gi|165875561|gb|ABY68609.1| DNA replication and repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|163803852|ref|ZP_02197699.1| putative exonuclease SbcC [Vibrio sp. AND4] gi|159172341|gb|EDP57221.1| putative exonuclease SbcC [Vibrio sp. AND4] Length = 495 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F +I+ +EF + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAQIETVEFDKLGTNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSIKTP 95 + P Sbjct: 61 RQGIQMRCDTAAP 73 >gi|132245|sp|P24718|RECF_ACTPL RecName: Full=DNA replication and repair protein recF gi|38953|emb|CAA45173.1| RecF [Actinobacillus pleuropneumoniae] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|53729132|ref|ZP_00134098.2| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207491|ref|YP_001052716.1| recombination protein F [Actinobacillus pleuropneumoniae L20] gi|166220695|sp|A3MY75|RECF_ACTP2 RecName: Full=DNA replication and repair protein recF gi|126096283|gb|ABN73111.1| DNA replication and repair protein RecF [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR + +E + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLIINNFRNLQSLD-LELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|292669296|ref|ZP_06602722.1| recombination protein F [Selenomonas noxia ATCC 43541] gi|292649137|gb|EFF67109.1| recombination protein F [Selenomonas noxia ATCC 43541] Length = 373 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ + +R + ++ + F D I G N GK+++ EA+ + +G + R Sbjct: 1 MQITELSLRSYRNYEDLA-LGFDDGAQIFLGANAQGKTNIIEALYYAAFGRSHRTSSDAE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRMGDD 66 >gi|73670048|ref|YP_306063.1| hypothetical protein Mbar_A2572 [Methanosarcina barkeri str. Fusaro] gi|72397210|gb|AAZ71483.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 650 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 12 CLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 C + R L L I + +FR +I +E L ++ G N GK+SL +++ Sbjct: 13 CFGNYKGKIHKRDLTMYLKKIHVKNFRCINDIN-LELNSGLNVIIGANNSGKTSLLDSLR 71 Query: 72 WLFY-GYTQRRKH 83 G R + Sbjct: 72 LALSIGNYSRSIY 84 >gi|326789143|ref|YP_004306964.1| DNA replication and repair protein RecF [Clostridium lentocellum DSM 5427] gi|326539907|gb|ADZ81766.1| DNA replication and repair protein RecF [Clostridium lentocellum DSM 5427] Length = 360 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ +++FR + E+ I + I G N GK+++ E+I + R Sbjct: 1 MYIKELALTNFRNYEELN-ISLDKGINIFKGDNAQGKTNILESIYLCATARSHRTHKEKE 59 Query: 87 IKKRSIKT 94 I + + ++ Sbjct: 60 IIRWNEES 67 >gi|331019823|gb|EGH99879.1| putative conjugative transposon DNA recombination protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 553 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + +F+ F + Q +F + + I G N GKS++ EA+E + +Q R Sbjct: 1 MLIESLRLINFKKFKD-QTFDFNEDVNIFVGDNNAGKSTILEALEIVL--NSQYRGR 54 >gi|323141434|ref|ZP_08076324.1| putative DNA replication and repair protein RecF [Phascolarctobacterium sp. YIT 12067] gi|322414090|gb|EFY04919.1| putative DNA replication and repair protein RecF [Phascolarctobacterium sp. YIT 12067] Length = 375 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + +FR + E ++ + + + GQN GK++L EAI + +G + R + Sbjct: 1 MKINSLYAVNFRNY-ESCSLQLSSMINVFYGQNAQGKTNLLEAIFYSAFGMSHRTSAEEE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 MLKMGAD 66 >gi|282848862|ref|ZP_06258252.1| RecF/RecN/SMC N-terminal domain protein [Veillonella parvula ATCC 17745] gi|282581367|gb|EFB86760.1| RecF/RecN/SMC N-terminal domain protein [Veillonella parvula ATCC 17745] Length = 438 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ E+ + + + + LTI+ G+NG GK+S+ +AI W G + + + Sbjct: 5 IKINSFELENVKRVKAVSYEPSPNGLTIIGGKNGQGKTSILDAIAWTLGG--AKFEPSSA 62 Query: 87 IKKRSIKTPM 96 ++ S P Sbjct: 63 VRDGSYNPPK 72 >gi|166362989|ref|YP_001655262.1| recombination protein F [Microcystis aeruginosa NIES-843] gi|189039629|sp|B0JM53|RECF_MICAN RecName: Full=DNA replication and repair protein recF gi|166085362|dbj|BAG00070.1| DNA replication and repair protein [Microcystis aeruginosa NIES-843] Length = 375 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E Q ++F TI+ G N GKS+L EAIE L + R Sbjct: 1 MYLEHLHLHSFRNYAE-QVLKFESKKTILLGNNAQGKSNLLEAIELLATLKSHRVSKDRD 59 Query: 87 IKKRS 91 + S Sbjct: 60 LVLES 64 >gi|149203433|ref|ZP_01880403.1| hypothetical protein RTM1035_02410 [Roseovarius sp. TM1035] gi|149143266|gb|EDM31305.1| hypothetical protein RTM1035_02410 [Roseovarius sp. TM1035] Length = 628 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L IEI +F+G Q I+ A +T++ G N GKS++ +A+ +L Sbjct: 1 MRLSHIEIENFKGIGTKQSIDLAP-ITLLFGPNSAGKSTILQALHYL 46 >gi|319425936|gb|ADV54010.1| dsDNA exonuclease, SbcC [Shewanella putrefaciens 200] Length = 1018 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q+++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQQLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|146292632|ref|YP_001183056.1| SMC domain-containing protein [Shewanella putrefaciens CN-32] gi|145564322|gb|ABP75257.1| SMC domain protein [Shewanella putrefaciens CN-32] Length = 1018 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q+++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQQLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|327265278|ref|XP_003217435.1| PREDICTED: DNA repair protein RAD50-like [Anolis carolinensis] Length = 1312 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIDKMSILGVRSFGIEDKDKQVISFFNPLTILVGPNGAGKTTIIECLKYVCTGDFPPGTK 62 Query: 84 GDS 86 G+S Sbjct: 63 GNS 65 >gi|321465214|gb|EFX76217.1| hypothetical protein DAPPUDRAFT_322547 [Daphnia pulex] Length = 1334 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I+ R F+ + I+F +T++ G+NG GK+++ E++++ G Sbjct: 3 RIDQLSITGIRNFSSDSAEVIKFEPPVTLILGKNGSGKTTIIESLKYATTG 53 >gi|313611868|gb|EFR86327.1| DNA replication and repair protein RecF [Listeria monocytogenes FSL F2-208] Length = 70 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-D 85 L I + +FR + E ++EF+ + + G+N GK++L EA+ L + R + D Sbjct: 1 MHLESIVLRNFRNY-ENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKD 59 Query: 86 SIKKRSIKTPM 96 I + M Sbjct: 60 FIMWEKEEAKM 70 >gi|291571835|dbj|BAI94107.1| DNA replication and repair protein RecF [Arthrospira platensis NIES-39] Length = 379 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E Q + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLRQFRNY-EAQDVAFDAPKTILVGNNAQGKSNLLEAVELLSTLKSHRVNRDRD 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|284052471|ref|ZP_06382681.1| recombination protein F [Arthrospira platensis str. Paraca] Length = 379 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E Q + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLRQFRNY-EAQDVAFDAPKTILVGNNAQGKSNLLEAVELLSTLKSHRVNRDRD 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|209524390|ref|ZP_03272939.1| DNA replication and repair protein RecF [Arthrospira maxima CS-328] gi|209495181|gb|EDZ95487.1| DNA replication and repair protein RecF [Arthrospira maxima CS-328] Length = 379 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E Q + F TI+ G N GKS+L EA+E L + R Sbjct: 1 MYLKTLHLRQFRNY-EAQDVAFDAPKTILVGNNAQGKSNLLEAVELLSTLKSHRVNRDRD 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|153000167|ref|YP_001365848.1| SMC domain-containing protein [Shewanella baltica OS185] gi|151364785|gb|ABS07785.1| SMC domain protein [Shewanella baltica OS185] Length = 1018 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q ++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQTLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|126173887|ref|YP_001050036.1| SMC domain-containing protein [Shewanella baltica OS155] gi|125997092|gb|ABN61167.1| SMC domain protein [Shewanella baltica OS155] Length = 1018 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q ++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQTLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|320158530|ref|YP_004190908.1| exonuclease SbcC [Vibrio vulnificus MO6-24/O] gi|319933842|gb|ADV88705.1| exonuclease SbcC [Vibrio vulnificus MO6-24/O] Length = 1044 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +EI FR + +F + + + NG+GKSS +A+EW + Sbjct: 1 MKIKKVEIEAFRAYQLKSDGTFDFTNDGEEPANFVALYAPNGFGKSSFYDAVEWAVTNHL 60 Query: 79 QR 80 +R Sbjct: 61 ER 62 >gi|291534249|emb|CBL07362.1| hypothetical protein MHY_29030 [Megamonas hypermegale ART12/1] Length = 560 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + IS F + + +++ + + +++G G GK+++ +AI + YG+T Sbjct: 1 MRPLKLTISAFGAYADKCELDMSLLGNKGIYLISGNTGAGKTTIFDAITFALYGHTSGGI 60 Query: 83 HGDSIKKRSI 92 + + + Sbjct: 61 RENEMLRSKY 70 >gi|195484008|ref|XP_002090524.1| GE13167 [Drosophila yakuba] gi|194176625|gb|EDW90236.1| GE13167 [Drosophila yakuba] Length = 1410 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y 75 Sbjct: 136 G 136 >gi|54026621|ref|YP_120863.1| hypothetical protein nfa46480 [Nocardia farcinica IFM 10152] gi|54018129|dbj|BAD59499.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 850 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + FRG ++ LT+V G+NG GKSS +EA E G +R Sbjct: 88 VFLRAIRVRGFRGIGAETELALRPGPGLTLVVGRNGCGKSSFAEAAELALTGGNRR 143 >gi|303240748|ref|ZP_07327261.1| SMC protein-like protein [Acetivibrio cellulolyticus CD2] gi|302591636|gb|EFL61371.1| SMC protein-like protein [Acetivibrio cellulolyticus CD2] Length = 483 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I +F+ E ++ F D L ++ G + +GKS++ AI+W+ Y G+ Sbjct: 4 INKVLIENFQSH-ENTELTFHDGLNVIIGPSDHGKSAVIRAIKWVLYNEP----RGNEFI 58 Query: 89 KRSI 92 ++ Sbjct: 59 RQGS 62 >gi|295086863|emb|CBK68386.1| Predicted ATP-dependent endonuclease of the OLD family [Bacteroides xylanisolvens XB1A] Length = 593 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS FR F +I F + + I+ G+N GK+++ +A+ Sbjct: 1 MYLSRLHISKFRVFDDITLY-FKNGINILIGENNSGKTAIIDALRICLG 48 >gi|257466632|ref|ZP_05630943.1| RECF protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917786|ref|ZP_07914026.1| DNA replication and repair protein recF [Fusobacterium gonidiaformans ATCC 25563] gi|313691661|gb|EFS28496.1| DNA replication and repair protein recF [Fusobacterium gonidiaformans ATCC 25563] Length = 364 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L I+++H R + Q+I + + + G+NG GK+S+ EAI + G + R KH Sbjct: 1 MKVLSIQLNHVRNL-KNQEIIISSPIQVFYGKNGQGKTSILEAIYFAATGLSFRTKHSSE 59 Query: 87 IKKRSIKT 94 + + + T Sbjct: 60 MIRYTKNT 67 >gi|257051458|ref|YP_003129291.1| chromosome segregation protein [Halorhabdus utahensis DSM 12940] gi|256690221|gb|ACV10558.1| SMC domain protein [Halorhabdus utahensis DSM 12940] Length = 890 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + HF+ + + + +T+ +G NG GKSSL EA + YG Sbjct: 1 MRFERVRLEHFKCYAD-ADLRLERGVTVFHGVNGSGKSSLLEACFFALYG 49 >gi|253572839|ref|ZP_04850238.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251837571|gb|EES65663.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 602 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS FR F +I F + + I+ G+N GK+++ +A+ Sbjct: 10 MYLSRLHISKFRVFDDITLY-FKNGINILIGENNSGKTAIIDALRICLG 57 >gi|253584165|ref|ZP_04861363.1| nuclease sbcCD subunit C [Fusobacterium varium ATCC 27725] gi|251834737|gb|EES63300.1| nuclease sbcCD subunit C [Fusobacterium varium ATCC 27725] Length = 448 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + ++R + +EF + ++ G+NG GKSS+ EAI + + R + Sbjct: 1 MKINRIHLENYRIH-DKLDVEFDSGINLLLGENGKGKSSILEAIGYALFDSELRGGNQRE 59 Query: 87 IKKRSIKTPM 96 K K+ Sbjct: 60 AIKYGKKSAK 69 >gi|156838385|ref|XP_001642899.1| hypothetical protein Kpol_392p8 [Vanderwaltozyma polyspora DSM 70294] gi|156113477|gb|EDO15041.1| hypothetical protein Kpol_392p8 [Vanderwaltozyma polyspora DSM 70294] Length = 1427 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + F+ + Q + F + V G NG GKS++ +++ ++F G+ + D + Sbjct: 156 IDKLVLHDFKSYAGTQVVGPFHSSFSAVVGPNGSGKSNVIDSMLFVF-GFRASKMRQDRL 214 Query: 88 KKRSIKTP 95 K+ Sbjct: 215 SDLIHKSE 222 >gi|6469332|gb|AAF13306.1|AF185287_1 XCAP-C/SMC4 homolog Gluon [Drosophila melanogaster] Length = 1409 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y--GYTQRRKHGDSIKKRSIKTP 95 R K ++ S P Sbjct: 136 GCRANRIRCKRVSTLIHSSSSYP 158 >gi|15614944|ref|NP_243247.1| hypothetical protein BH2381 [Bacillus halodurans C-125] gi|10175001|dbj|BAB06100.1| BH2381 [Bacillus halodurans C-125] Length = 470 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + +F+ + IEF + + ++ G++ GK+S+ AI W + Sbjct: 4 INQVRLENFQSHLD-TVIEFGEGMNVIVGESDSGKTSILRAIRWALF 49 >gi|193215422|ref|YP_001996621.1| SMC domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193088899|gb|ACF14174.1| SMC domain protein [Chloroherpeton thalassium ATCC 35110] Length = 874 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 30 LDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + +F + E Q+++F H+ + G NG GKSSL EAI W +G Sbjct: 4 KKLRLKNFLSYGEPMQELDFDRFHVACLVGSNGSGKSSLIEAIGWCVWG 52 >gi|91091932|ref|XP_966409.1| PREDICTED: similar to structural maintenance of chromosomes smc3 isoform 1 [Tribolium castaneum] gi|270000783|gb|EEZ97230.1| hypothetical protein TcasGA2_TC011028 [Tribolium castaneum] Length = 1203 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQVIIQGFKSYRDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|283782560|ref|YP_003373314.1| DNA replication and repair protein RecF [Gardnerella vaginalis 409-05] gi|283442151|gb|ADB14617.1| DNA replication and repair protein RecF [Gardnerella vaginalis 409-05] Length = 433 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + FR + I +F + ++ G NG GK+++ EA+E G + R Sbjct: 1 MYISRIALDTFRSWNHII-CDFNPGINVIYGNNGLGKTNIVEALEVTGTGISHRTSSTLP 59 Query: 87 IKKRSIK 93 + K+ + Sbjct: 60 LIKKGYE 66 >gi|269124446|ref|YP_003297816.1| DNA sulfur modification protein DndD [Thermomonospora curvata DSM 43183] gi|268309404|gb|ACY95778.1| DNA sulfur modification protein DndD [Thermomonospora curvata DSM 43183] Length = 664 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 10/81 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-- 80 L ++ + +F + Q +E + ++ G NG GK++L +AI+ YG R Sbjct: 1 MLLHNVTLKNFGAYKGEQSLELTTEPGRPIILIGGLNGCGKTTLLDAIQLALYGARARTS 60 Query: 81 ----RKHGDSIKKRSIKTPMP 97 R + ++ + P Sbjct: 61 GRGNRSYESYLRDSINRQANP 81 >gi|169627112|ref|YP_001700761.1| recombination protein F [Mycobacterium abscessus ATCC 19977] gi|169239079|emb|CAM60107.1| DNA replication and repair protein RecF [Mycobacterium abscessus] Length = 401 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E +E T+ G NGYGK++L EA+ + + R Sbjct: 20 VYVRQLGLRDFRSW-ERVNLELEPGRTVFVGPNGYGKTNLVEALWYSSTLGSHRVATDAP 78 Query: 87 IKKRSIK 93 + + + Sbjct: 79 LIRTGAE 85 >gi|24584683|ref|NP_723996.1| gluon [Drosophila melanogaster] gi|6014602|gb|AAF01416.1|AF186472_1 condensin subunit SMC4 [Drosophila melanogaster] gi|7298332|gb|AAF53560.1| gluon [Drosophila melanogaster] gi|159884137|gb|ABX00747.1| LD13578p [Drosophila melanogaster] Length = 1409 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y--GYTQRRKHGDSIKKRSIKTP 95 R K ++ S P Sbjct: 136 GCRANRIRCKRVSTLIHSSSSYP 158 >gi|225405631|ref|ZP_03760820.1| hypothetical protein CLOSTASPAR_04852 [Clostridium asparagiforme DSM 15981] gi|225042825|gb|EEG53071.1| hypothetical protein CLOSTASPAR_04852 [Clostridium asparagiforme DSM 15981] Length = 485 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + IS F + +E + ++ G G GK+++ +AI + YG Sbjct: 1 MRPTKLTISAFGPYAGEMTLELDRLGDRGIYLITGDTGAGKTTIFDAITFALYGNASGEN 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RKPRMLRSKY 70 >gi|194884406|ref|XP_001976251.1| GG20110 [Drosophila erecta] gi|190659438|gb|EDV56651.1| GG20110 [Drosophila erecta] Length = 1409 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y 75 Sbjct: 136 G 136 >gi|189197015|ref|XP_001934845.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980793|gb|EDU47419.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1306 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 28 KLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKH 83 K+ + I R F + I+F LT++ G NG GK+++ E++++ G TQ + Sbjct: 3 KIDRMMIQGVRSFGPEKGETIQFTAPLTLIVGWNGSGKTTIIESLKYATTGDLPTQSKTG 62 Query: 84 GDSIKKRSIKTPMPM 98 G I ++ + Sbjct: 63 GAFIHDPKLRNEKEL 77 >gi|307942710|ref|ZP_07658055.1| DNA replication and repair protein RecF [Roseibium sp. TrichSKD4] gi|307773506|gb|EFO32722.1| DNA replication and repair protein RecF [Roseibium sp. TrichSKD4] Length = 379 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +L + +++FR + + ++ A L G NG GK+++ EA+ +L G RR + Sbjct: 6 VARLNRLSLTNFRNYASLD-LDLAAQLVAFVGANGTGKTNILEAVSYLTAGRGLRRAN 62 >gi|297243222|ref|ZP_06927157.1| RecF pathway recombinational DNA repair ATPase [Gardnerella vaginalis AMD] gi|296888756|gb|EFH27493.1| RecF pathway recombinational DNA repair ATPase [Gardnerella vaginalis AMD] Length = 433 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + FR + I +F + ++ G NG GK+++ EA+E G + R Sbjct: 1 MYISRIALDTFRSWNHII-CDFKPGINVIYGNNGLGKTNIVEALEVTGTGISHRTSSTLP 59 Query: 87 IKKRSIK 93 + K+ + Sbjct: 60 LIKKGYE 66 >gi|118787977|ref|XP_316422.3| AGAP006388-PA [Anopheles gambiae str. PEST] gi|27227576|emb|CAD59405.1| SMC3 protein [Anopheles gambiae] gi|116127058|gb|EAA11190.3| AGAP006388-PA [Anopheles gambiae str. PEST] Length = 1201 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQVIIQGFKSYREQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|300122972|emb|CBK23979.2| unnamed protein product [Blastocystis hominis] Length = 1187 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F + + + E F + ++ G NG GKS+ AI+++ Sbjct: 1 MHIKKVIIEGFGSYAKAENPELFGPGINVILGVNGSGKSNFFRAIQFVL 49 >gi|226951285|ref|ZP_03821749.1| possible RecF/RecN/SMC N domain protein [Acinetobacter sp. ATCC 27244] gi|226837969|gb|EEH70352.1| possible RecF/RecN/SMC N domain protein [Acinetobacter sp. ATCC 27244] Length = 351 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 28/48 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I+ +R F+E+ +I F L ++ G+NG GK+++ + LF Sbjct: 1 MYIKKLSITGYRCFSELFEINFRKGLNVIVGENGAGKTAIINSFRQLF 48 >gi|169335586|ref|ZP_02862779.1| hypothetical protein ANASTE_02001 [Anaerofustis stercorihominis DSM 17244] gi|169258324|gb|EDS72290.1| hypothetical protein ANASTE_02001 [Anaerofustis stercorihominis DSM 17244] Length = 366 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +IEI++FR E F I G+N GK++ EA+ G + R K+ + Sbjct: 1 MYIENIEITNFRNI-EKINTSFNKKYNIFYGKNAQGKTNFLEALSLTLNGMSHREKNTSN 59 Query: 87 IKKRSIK 93 K Sbjct: 60 FIKNGED 66 >gi|149919819|ref|ZP_01908296.1| DNA replication and repair protein RecF [Plesiocystis pacifica SIR-1] gi|149819426|gb|EDM78857.1| DNA replication and repair protein RecF [Plesiocystis pacifica SIR-1] Length = 406 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 27 FKLLDIEISHFRGFTEIQ--------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + ++ FR F ++ F + T++ G NG GK+++ EA+ + Sbjct: 1 MELRRLTLADFRNFRGATPEQPGPGVELAFGERFTVLWGHNGAGKTNVLEALYLCSTLRS 60 Query: 79 QRRKHGDSIKKRSIKTPM 96 R ++ +R Sbjct: 61 FRTTDAKALLRRGQDHAR 78 >gi|70725005|ref|YP_251919.1| recombination protein F [Staphylococcus haemolyticus JCSC1435] gi|82581561|sp|Q4LAL2|RECF_STAHJ RecName: Full=DNA replication and repair protein recF gi|68445729|dbj|BAE03313.1| DNA repair and genetic recombination protein [Staphylococcus haemolyticus JCSC1435] Length = 371 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E +E + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EEVTLECHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + + MP+ M + + Q+K Sbjct: 60 LIRFNSEYAKIEGVLNYRHGTMPLTMFITKKGKQVK 95 >gi|322500384|emb|CBZ35461.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1360 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +++ R F Q I+F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGT 56 >gi|283480417|emb|CAY76333.1| DNA replication and repair protein recF [Erwinia pyrifoliae DSM 12163] Length = 397 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 9/91 (9%) Query: 3 RLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYG 62 + R+ T AC S + L + I FR E + A + G NG G Sbjct: 21 KTRRCYTIACFGISS--------VMALTRLLIKDFRNI-ENADLALAPGFNFLVGPNGSG 71 Query: 63 KSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 K+S+ EAI L +G R + + Sbjct: 72 KTSVLEAIYTLGHGRAFRSLQAGRVIRHEQD 102 >gi|256823909|ref|YP_003147869.1| DNA replication and repair protein RecF [Kytococcus sedentarius DSM 20547] gi|256687302|gb|ACV05104.1| DNA replication and repair protein RecF [Kytococcus sedentarius DSM 20547] Length = 390 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR + E ++ +T+ G+NG GK++L EA +L + R Sbjct: 1 MRLRHLAVRDFRSY-EQADLDLPAGVTVFVGRNGQGKTNLVEAAGYLATLGSHRVSSDQP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRVGAE 66 >gi|195426264|ref|XP_002061260.1| GK20820 [Drosophila willistoni] gi|194157345|gb|EDW72246.1| GK20820 [Drosophila willistoni] Length = 1320 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + Q+I F+ +T++ GQNG GK+++ E ++ G Sbjct: 4 IEKLSIQGIRSFGSNAEDRQEITFSSPVTLILGQNGCGKTTIIECLKHALTG 55 >gi|251794325|ref|YP_003009056.1| chromosome segregation ATPase-like protein [Paenibacillus sp. JDR-2] gi|247541951|gb|ACS98969.1| Chromosome segregation ATPase-like protein [Paenibacillus sp. JDR-2] Length = 670 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L IEI +F + + EF + ++ G NG GK++ I++ G ++ Sbjct: 19 LKRIEIKNFSLYKKDIHFEFIHGVNLIVGGNGVGKTTFINLIKYGLIGLYKKEL 72 >gi|146091672|ref|XP_001470089.1| RAD50 DNA repair-like protein [Leishmania infantum] gi|134084883|emb|CAM69281.1| RAD50 DNA repair-like protein [Leishmania infantum JPCM5] Length = 1360 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +++ R F Q I+F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGT 56 >gi|160872975|ref|YP_001556982.1| ATPase involved in DNA repair [Shewanella baltica OS195] gi|160858497|gb|ABX51722.1| ATPase involved in DNA repair [Shewanella baltica OS195] Length = 1059 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEF--ADH----LTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K +EI F+ + Q +F D + + NG+GK+S +AI++ Sbjct: 1 MKFKRVEIQAFKSYLYKQDGTFDFTVKDGKPAEIISIYAPNGFGKTSFYDAIDFCMTNNI 60 Query: 79 QRRKHGDSIKKRSIKTPMPMCMA 101 R S+ + + + Sbjct: 61 TRFIRDPSLASANNSDAKELNQS 83 >gi|315426401|dbj|BAJ48040.1| exonuclease SbcCD, C subunit [Candidatus Caldiarchaeum subterraneum] gi|315426413|dbj|BAJ48051.1| exonuclease SbcCD, C subunit [Candidatus Caldiarchaeum subterraneum] Length = 767 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + KLL + +F+ + + F+D +T+++G N GKSS+ +AI + Y R Sbjct: 1 MVKLLSLYAYNFKKLRFDEPLRFSDGVTLISGLNEAGKSSILDAILYALYARVIR 55 >gi|325105363|ref|YP_004275017.1| DNA replication and repair protein RecF [Pedobacter saltans DSM 12145] gi|324974211|gb|ADY53195.1| DNA replication and repair protein RecF [Pedobacter saltans DSM 12145] Length = 368 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + +F+ + + ++ F++ +G NG GK++L +AI +L + + + Sbjct: 1 MYLKNLSLINFKNY-DEAELSFSEGANAFSGDNGAGKTNLLDAIHYLALCKS----YFNP 55 Query: 87 IKKRSIKTPMPMCM 100 I + IK M Sbjct: 56 IDSQQIKQEQDFFM 69 >gi|257452988|ref|ZP_05618287.1| RECF protein [Fusobacterium sp. 3_1_5R] gi|317059528|ref|ZP_07924013.1| RECF protein [Fusobacterium sp. 3_1_5R] gi|313685204|gb|EFS22039.1| RECF protein [Fusobacterium sp. 3_1_5R] Length = 364 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L I+++H R + Q+I + + + G+NG GK+S+ EAI + G + R KH Sbjct: 1 MKVLSIQLNHVRNL-KNQEIIISSPIQVFYGKNGQGKTSILEAIYFAATGLSFRTKHSSE 59 Query: 87 IKKRSIKT 94 + + + T Sbjct: 60 MIRYTKNT 67 >gi|254489937|ref|ZP_05103132.1| hypothetical protein MDMS009_268 [Methylophaga thiooxidans DMS010] gi|224465022|gb|EEF81276.1| hypothetical protein MDMS009_268 [Methylophaga thiooxydans DMS010] Length = 595 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ +FR + +I F+ ++T + G+N GK+S+ +A+ F + + GD Sbjct: 1 MKLKKLKVQNFRAYQTETEISFS-NMTGLIGRNDVGKTSILDALGIFFGHKLCKYEAGDK 59 >gi|157363745|ref|YP_001470512.1| hypothetical protein Tlet_0882 [Thermotoga lettingae TMO] gi|157314349|gb|ABV33448.1| hypothetical protein Tlet_0882 [Thermotoga lettingae TMO] Length = 837 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ ++ + F F + KIEF D + +V G N GK++L + I +Q H Sbjct: 4 LKIKELNVEGFGKFHDF-KIEFHDGINLVVGPNESGKTTLYKFIVSALSELSQEDFH 59 >gi|322789993|gb|EFZ15069.1| hypothetical protein SINV_01798 [Solenopsis invicta] Length = 1469 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L S +R +I K+++ +F+ + I F + + G NG GKS++ +++ ++F Sbjct: 38 LDSTGSRLMITKIVN---HNFKSYAGTHVIGPFQKSFSAIVGPNGSGKSNVIDSMLFVF- 93 Query: 76 GYTQRRKHGDSI 87 GY + I Sbjct: 94 GYRASKIRSKKI 105 >gi|295110867|emb|CBL24820.1| ATPase involved in DNA repair [Ruminococcus obeum A2-162] Length = 1062 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L +++ F + E I+F +L ++ G G GK+++ +AI + YG + Sbjct: 1 MKPLKLKMQAFGSYGEETLIDFEKVNQNLFLITGDTGAGKTTIFDAIVFALYGEASSSAN 60 Query: 84 G 84 Sbjct: 61 K 61 >gi|328675559|gb|AEB28234.1| DNA repair protein RecN [Francisella cf. novicida 3523] Length = 549 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F D +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFRDGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|262381595|ref|ZP_06074733.1| DNA sulfur modification protein DndD [Bacteroides sp. 2_1_33B] gi|262296772|gb|EEY84702.1| DNA sulfur modification protein DndD [Bacteroides sp. 2_1_33B] Length = 708 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 + +IE+++FR + I ++ +++G+NG+GK++ ++ W YG + Sbjct: 1 MYIKEIELNNFRIYKGKNVISLLPSDDKNVIVISGKNGFGKTTFLMSLVWCLYGKQMEKV 60 Query: 82 --KHGDSIKKRSIKTP 95 + I+ + T Sbjct: 61 DDLYEKEIRDKGNYTK 76 >gi|162451513|ref|YP_001613880.1| hypothetical protein sce3241 [Sorangium cellulosum 'So ce 56'] gi|161162095|emb|CAN93400.1| hypothetical protein sce3241 [Sorangium cellulosum 'So ce 56'] Length = 423 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + + FRGF + ++F+ +T + G NG GK+S+ +A+ L Sbjct: 1 MKITRLSLRDFRGFRSLD-LDFSPDVTALVGVNGAGKTSILDALALLL 47 >gi|157737948|ref|YP_001490632.1| hypothetical protein Abu_1715 [Arcobacter butzleri RM4018] gi|157699802|gb|ABV67962.1| hypothetical protein Abu_1715 [Arcobacter butzleri RM4018] Length = 590 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + ++ F+ + E + +T++ G NG GKS++ EAI +F +++K Sbjct: 1 MKLKRLWVNGFKNLKDFEINFESNEGITLLIGNNGSGKSNILEAISAIFVSLIEKKK 57 >gi|149634592|ref|XP_001512851.1| PREDICTED: similar to SMCD [Ornithorhynchus anatinus] Length = 1238 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 30 LDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 25 KEVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 70 >gi|328880920|emb|CCA54159.1| Exonuclease SbcC [Streptomyces venezuelae ATCC 10712] Length = 1012 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L +EI+ F F Q ++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLEITAFGPFGTTQTVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYGS 55 >gi|326385633|ref|ZP_08207267.1| SMC protein-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209967|gb|EGD60750.1| SMC protein-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 641 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 27/51 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L I I + R F + +++ F ++I+ G NG GK++L + + + Y Sbjct: 1 MLLKKITIENVRSFLDRREMVFDGPISIIIGPNGGGKTNLLDVVNTMLRRY 51 >gi|290581413|ref|YP_003485805.1| putative RecF protein [Streptococcus mutans NN2025] gi|254998312|dbj|BAH88913.1| putative RecF protein [Streptococcus mutans NN2025] Length = 363 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + H+R +T I+ EF+ L + GQN GK++ EAI +L + R + Sbjct: 1 MWIEKINLKHYRNYTAIES-EFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIQFGQK 66 >gi|255726318|ref|XP_002548085.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134009|gb|EER33564.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 1307 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + I+F LT++ GQNG GK+++ E +++ G G Sbjct: 4 IYKLSIKGIRAFEQETDETIQFGFPLTLICGQNGCGKTTIIECLKYATTGSLPPNSKG 61 >gi|164663071|ref|XP_001732657.1| hypothetical protein MGL_0432 [Malassezia globosa CBS 7966] gi|159106560|gb|EDP45443.1| hypothetical protein MGL_0432 [Malassezia globosa CBS 7966] Length = 78 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I R F E+ I+F LT++ G NG GK+++ E +++ G G Sbjct: 4 LDKLAIRGMRSFDSHEVNIIQFFKPLTVIVGHNGSGKTTIVECLKYAVAGDLPPNTKGGG 63 Query: 87 IKKRSIKTPM 96 P Sbjct: 64 FIHDPYVRPK 73 >gi|159027176|emb|CAO86808.1| recF [Microcystis aeruginosa PCC 7806] Length = 375 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E Q ++F TI+ G N GKS+L EAIE L + R Sbjct: 1 MYLEHLHLHSFRNYAE-QLLKFESKKTILLGNNAQGKSNLLEAIELLATLKSHRVSKDRD 59 Query: 87 IKKRS 91 + S Sbjct: 60 LVLES 64 >gi|28872226|ref|NP_794845.1| hypothetical protein PSPTO_5113 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855480|gb|AAO58540.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 422 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +FR + E +F +V G NG GK+SL + Y G Sbjct: 1 MRLDHLRLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAECLIPYGNAMGQGQE 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|317498975|ref|ZP_07957257.1| hypothetical protein HMPREF0996_02241 [Lachnospiraceae bacterium 5_1_63FAA] gi|316893724|gb|EFV15924.1| hypothetical protein HMPREF0996_02241 [Lachnospiraceae bacterium 5_1_63FAA] Length = 350 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +S F F E I+F D + +++G+ G GK+++ + I + YG Sbjct: 1 MRPQKLILSAFGPFAEETVIDFTRFKDGIFLISGETGAGKTTIFDGICFALYGEPSGSYR 60 Query: 84 GDSIKKR 90 + + Sbjct: 61 KQDMLRS 67 >gi|315441700|ref|YP_004074579.1| DNA replication and repair protein RecF [Mycobacterium sp. Spyr1] gi|315260003|gb|ADT96744.1| DNA replication and repair protein RecF [Mycobacterium sp. Spyr1] Length = 389 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR ++ ++E + T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLALTDFRSWS-RVELELSPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRAGAE 66 >gi|289579068|ref|YP_003477695.1| SMC domain protein [Thermoanaerobacter italicus Ab9] gi|289528781|gb|ADD03133.1| SMC domain protein [Thermoanaerobacter italicus Ab9] Length = 658 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E I FA I+ G+N GKS++ +AI+ + ++ Sbjct: 1 MYLHRVVIKNFRSI-EYVDITFAKGKNIIVGKNNCGKSNIIKAIDLVLGESNPAYVKNEN 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|229918310|ref|YP_002886956.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] gi|229469739|gb|ACQ71511.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] Length = 671 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+ I++++++ + Q I F ++ ++ G NG GK+++ +A+ +L YG Sbjct: 1 MKLVRIQLNNYKTYLNSQTINFDTHTDDKNIVLIGGLNGAGKTTILKAVRYLLYG 55 >gi|255659818|ref|ZP_05405227.1| DNA replication and repair protein RecF [Mitsuokella multacida DSM 20544] gi|260847893|gb|EEX67900.1| DNA replication and repair protein RecF [Mitsuokella multacida DSM 20544] Length = 365 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R ++E++ + + I G N GK+++ EA+ + G++ R Sbjct: 1 MYVRSLKLRNYRNYSELE-LALQPGINIFLGPNAQGKTNVVEAVYYASLGHSHRTHLDTE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|195392610|ref|XP_002054950.1| GJ19101 [Drosophila virilis] gi|194149460|gb|EDW65151.1| GJ19101 [Drosophila virilis] Length = 1130 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|145221418|ref|YP_001132096.1| recombination protein F [Mycobacterium gilvum PYR-GCK] gi|189039630|sp|A4T4U1|RECF_MYCGI RecName: Full=DNA replication and repair protein recF gi|145213904|gb|ABP43308.1| DNA replication and repair protein RecF [Mycobacterium gilvum PYR-GCK] Length = 389 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR ++ ++E + T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLALTDFRSWS-RVELELSPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRAGAE 66 >gi|298253029|ref|ZP_06976821.1| RecF pathway recombinational DNA repair ATPase [Gardnerella vaginalis 5-1] gi|297532424|gb|EFH71310.1| RecF pathway recombinational DNA repair ATPase [Gardnerella vaginalis 5-1] Length = 433 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + FR + I +F + ++ G NG GK+++ EA+E G + R Sbjct: 1 MYISRIALDTFRSWNHII-CDFNPGINVIYGNNGLGKTNIVEALEVTGTGISHRTSSTLP 59 Query: 87 IKKRSIK 93 + K+ + Sbjct: 60 LIKKGYE 66 >gi|296332489|ref|ZP_06874950.1| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673770|ref|YP_003865442.1| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. spizizenii str. W23] gi|296150407|gb|EFG91295.1| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412014|gb|ADM37133.1| DNA ATP-dependent repair enzyme [Bacillus subtilis subsp. spizizenii str. W23] Length = 1130 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F E Q I+F + + G G GKSS+ +A+ YG +R + Sbjct: 6 LSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAAN 61 >gi|285019397|ref|YP_003377108.1| hypothetical protein XALc_2636 [Xanthomonas albilineans GPE PC73] gi|283474615|emb|CBA17114.1| hypothetical protein XALc_2636 [Xanthomonas albilineans] Length = 616 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + +FRG+++ +IE D LT G+N GKS++ EA++ + + + GD+ Sbjct: 1 MKLSAVILENFRGYSQRTRIEIDD-LTAFIGKNDAGKSTILEALD--IFFNDGKPERGDA 57 >gi|194766347|ref|XP_001965286.1| GF24329 [Drosophila ananassae] gi|190617896|gb|EDV33420.1| GF24329 [Drosophila ananassae] Length = 1404 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 78 IKKIVNRNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFG 125 >gi|154685516|ref|YP_001420677.1| YirY [Bacillus amyloliquefaciens FZB42] gi|154351367|gb|ABS73446.1| YirY [Bacillus amyloliquefaciens FZB42] Length = 1130 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F E Q I+F + + G G GKSS+ +A+ YG +R + Sbjct: 6 LTIKGLHSFREEQTIDFAGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAAN 61 >gi|221195223|ref|ZP_03568279.1| DNA replication and repair protein RecF [Atopobium rimae ATCC 49626] gi|221185126|gb|EEE17517.1| DNA replication and repair protein RecF [Atopobium rimae ATCC 49626] Length = 361 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +I + +FR F + ++F+ +TI+ G N GK++ EA++ L GY+ R+ Sbjct: 5 VNNISLVNFRNFR-MLSVDFSQSITILVGHNAVGKTNTIEALQMLTAGYSFRK 56 >gi|157114659|ref|XP_001652359.1| structural maintenance of chromosomes smc3 [Aedes aegypti] gi|108877178|gb|EAT41403.1| structural maintenance of chromosomes smc3 [Aedes aegypti] Length = 1201 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQVIIQGFKSYREQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|324999885|ref|ZP_08120997.1| recombination protein F [Pseudonocardia sp. P1] Length = 398 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ FR + E + +E +T++ G NG GK++L E I +L + R Sbjct: 1 MYLRRFAVTDFRSWPEAE-LELDPGVTVLVGSNGVGKTNLVEGIGYLASLGSHRVSSDTP 59 Query: 87 IKKRSIKT 94 + +R + Sbjct: 60 LIRRGAEQ 67 >gi|224541906|ref|ZP_03682445.1| hypothetical protein CATMIT_01079 [Catenibacterium mitsuokai DSM 15897] gi|224525140|gb|EEF94245.1| hypothetical protein CATMIT_01079 [Catenibacterium mitsuokai DSM 15897] Length = 441 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +E+ + + +Q + LTI+ G N GK+S+ +AI W G + Sbjct: 4 IKINSLELENVKRIKAVQIEPSENGLTIIGGNNNNGKTSVLDAITWCLGGNKYK 57 >gi|163753837|ref|ZP_02160960.1| putative ABC transporter ATP-binding protein [Kordia algicida OT-1] gi|161326051|gb|EDP97377.1| putative ABC transporter ATP-binding protein [Kordia algicida OT-1] Length = 703 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + IE+ +FR + I+ + +++ IV+G+NG+GK++ ++ W YG Sbjct: 3 IKSIELDNFRIYKGNNIIDLSVTDDENIIIVSGKNGFGKTTFLMSLVWCLYG 54 >gi|54792259|emb|CAF18543.1| RAD50 protein [Gallus gallus] Length = 1250 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPGTK 62 Query: 84 GDS 86 G+S Sbjct: 63 GNS 65 >gi|325115486|emb|CBZ51041.1| xenopus 14s cohesin smc1 subunit, related [Neospora caninum Liverpool] Length = 1652 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + +F+ + I V G NG GKS+L++AI + G ++ Sbjct: 236 LRLRWVVLENFKSYKGTHVIGPLYGSVAVIGPNGAGKSNLTDAICFAL-GVNAKQLR 291 >gi|322493130|emb|CBZ28415.1| RAD50 DNA repair-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1360 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +++ R F Q I+F LT++ G+NG GK+++ EA+ Sbjct: 4 IEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEAL 49 >gi|154340261|ref|XP_001566087.1| RAD50 DNA repair-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063406|emb|CAM39585.1| RAD50 DNA repair-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1361 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +++ R F Q I+F LT++ G+NG GK+++ EA+ Sbjct: 4 IEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEAL 49 >gi|119774405|ref|YP_927145.1| exonuclease SbcC [Shewanella amazonensis SB2B] gi|119766905|gb|ABL99475.1| exonuclease SbcC, putative [Shewanella amazonensis SB2B] Length = 1020 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + I+ F F + Q ++F L ++NG G GK+++ +AI + YG T + Sbjct: 1 MKPLTLAITAFGPFVDTQTLDFRALGEWPLFLINGPTGAGKTTILDAICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 + + Sbjct: 61 REGTQMRC 68 >gi|315022216|gb|EFT35244.1| DNA replication and repair protein recF [Riemerella anatipestifer RA-YM] gi|325336656|gb|ADZ12930.1| Recombinational DNA repair ATPase (RecF pathway) [Riemerella anatipestifer RA-GD] Length = 380 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + +++F+ E +F+ + G NG GK+++ +A+ +L G + Sbjct: 20 VMIIKKLYLTNFKNHQERV-FDFSSEINSFVGNNGVGKTNILDALHYLSVGKS 71 >gi|296491125|gb|DAA33198.1| structural maintenance of chromosomes 4 [Bos taurus] Length = 344 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|222150257|ref|YP_002559410.1| recombination protein F [Macrococcus caseolyticus JCSC5402] gi|254790482|sp|B9E903|RECF_MACCJ RecName: Full=DNA replication and repair protein recF gi|222119379|dbj|BAH16714.1| recombination protein F [Macrococcus caseolyticus JCSC5402] Length = 369 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++H+R + E ++ F+D + I G N GK++L EAI L + R + Sbjct: 1 MKLKTLTLTHYRNY-ETAELNFSDEVNIFIGINAQGKTNLLEAIYCLAMAKSHRTSNDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|209523657|ref|ZP_03272211.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496062|gb|EDZ96363.1| SMC domain protein [Arthrospira maxima CS-328] Length = 406 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I + +F F + I+ + I+ G NG GKS+L +AI L+ +K Sbjct: 2 LSEITLENFFSFRKPTTIKLNPGVNILLGINGSGKSNLLKAIALLYEIIAGNGLEKTFLK 61 Query: 89 KRS 91 K S Sbjct: 62 KWS 64 >gi|24380484|ref|NP_722439.1| recombination protein F [Streptococcus mutans UA159] gi|51316462|sp|Q8DRR3|RECF_STRMU RecName: Full=DNA replication and repair protein recF gi|24378515|gb|AAN59745.1|AE015036_4 putative RecF protein, ATPase involved in DNA repair [Streptococcus mutans UA159] Length = 363 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + H+R +T I+ EF+ L + GQN GK++ EAI +L + R + Sbjct: 1 MWIEKINLKHYRNYTAIES-EFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LIQFGQK 66 >gi|17563838|ref|NP_506070.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-50) [Caenorhabditis elegans] gi|68062283|sp|O44199|RAD50_CAEEL RecName: Full=DNA repair protein rad-50 gi|2687855|emb|CAA99730.1| RAD50 homologue ceRAD50 [Caenorhabditis elegans] gi|4008379|emb|CAB01581.1| C. elegans protein T04H1.4a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1298 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Query: 28 KLLDIEISHFRGFTEI----QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + I R + KI+F T+++G NG GK++ EA+ ++ G +K Sbjct: 3 KFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMPTQKK 62 Query: 84 GDSIKKRSIKTPMPMCMAV 102 + I + + +V Sbjct: 63 QNFIHSTDVARKTRVDASV 81 >gi|146413475|ref|XP_001482708.1| hypothetical protein PGUG_04663 [Meyerozyma guilliermondii ATCC 6260] Length = 1210 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKRIVIQGFKTYKNATVIDLLSPHHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|319651102|ref|ZP_08005236.1| DNA replication and repair protein recF [Bacillus sp. 2_A_57_CT2] gi|317397272|gb|EFV77976.1| DNA replication and repair protein recF [Bacillus sp. 2_A_57_CT2] Length = 372 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + E ++ F + + ++ G+N GK+++ E+I L + R + Sbjct: 1 MHIEQLLLKNYRNY-EELEVNFENKVNVILGENAQGKTNVMESIYVLAMAKSHRTSNDKD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWDQE 66 >gi|261210259|ref|ZP_05924555.1| exonuclease SbcC [Vibrio sp. RC341] gi|260840603|gb|EEX67159.1| exonuclease SbcC [Vibrio sp. RC341] Length = 1013 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLTLQAFGPFASREVIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 + P + V Sbjct: 61 RTGDQMRCDFADPECLTEVV 80 >gi|297204958|ref|ZP_06922355.1| exonuclease [Streptomyces sviceus ATCC 29083] gi|197716927|gb|EDY60961.1| exonuclease [Streptomyces sviceus ATCC 29083] Length = 1002 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + + F F I+F AD L +++G G GKS++ AI + YG Sbjct: 1 MRLHTLRLQAFGPFAGTHTIDFDALSADGLFLLHGDTGAGKSTIFAAICFALYG 54 >gi|157374728|ref|YP_001473328.1| exonuclease SbcC, putative [Shewanella sediminis HAW-EB3] gi|157317102|gb|ABV36200.1| exonuclease SbcC, putative [Shewanella sediminis HAW-EB3] Length = 1018 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q +F+ + L ++NG G GK+++ +AI + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQVTDFSALGSNPLFLINGPTGAGKTTILDAICFALYGKTTGDE 60 Query: 83 HGDSIKKRSIK-----TPMPMCMAVPRCKYQLK 110 S + + T + A+ +Y+++ Sbjct: 61 REGSQMRCDLSVDTLLTEVTFSFALGEKQYRIR 93 >gi|225848653|ref|YP_002728816.1| ATP/GTP-binding protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643843|gb|ACN98893.1| ATP/GTP-binding protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 484 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGD 85 KL I I +FR + + ++E D LT+ G N GKSS+ EA++ + G + R D Sbjct: 1 MKLRKINIENFRCYKDETEVEIED-LTVFVGANDSGKSSILEALDIFFNEGRAEIRFTED 59 Query: 86 SI 87 I Sbjct: 60 DI 61 >gi|187777563|ref|ZP_02994036.1| hypothetical protein CLOSPO_01154 [Clostridium sporogenes ATCC 15579] gi|187774491|gb|EDU38293.1| hypothetical protein CLOSPO_01154 [Clostridium sporogenes ATCC 15579] Length = 1176 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F E Q+I+F L + G G GKSS+ +AI YG R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITIALYGDIAR-- 58 Query: 83 HGDSIKKRSIKT 94 DS + ++ T Sbjct: 59 --DSTQFINLDT 68 >gi|157962454|ref|YP_001502488.1| SMC domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847454|gb|ABV87953.1| SMC domain protein [Shewanella pealeana ATCC 700345] Length = 1018 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L +E+S F F Q +F+ + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLTLEMSAFGPFASTQITDFSALGSNPLFLINGPTGAGKTTLLDGICFALYGKTTGDE 60 Query: 83 HGDSIKKR-----SIKTPMPMCMAVPRCKYQLK 110 S + S+ T + A+ +Y+++ Sbjct: 61 REGSQMRCDLAADSLLTEVTFSFALGDKQYRIR 93 >gi|116694151|ref|YP_728362.1| DNA repair exonuclease, SbcC [Ralstonia eutropha H16] gi|113528650|emb|CAJ94997.1| DNA repair exonuclease, SbcC [Ralstonia eutropha H16] Length = 1020 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++++F +++G G GK++L +AI + YG T + Sbjct: 1 MRPLHLTLQAFGPFAATEQVDFTRLGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSGGE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RSAQAMRSANAAP 73 >gi|319648521|ref|ZP_08002737.1| hypothetical protein HMPREF1012_03776 [Bacillus sp. BT1B_CT2] gi|317389600|gb|EFV70411.1| hypothetical protein HMPREF1012_03776 [Bacillus sp. BT1B_CT2] Length = 85 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I +S +R + E ++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQNITLSSYRNY-ERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|242787617|ref|XP_002481050.1| nuclear condensin complex subunit Smc2, putative [Talaromyces stipitatus ATCC 10500] gi|218721197|gb|EED20616.1| nuclear condensin complex subunit Smc2, putative [Talaromyces stipitatus ATCC 10500] Length = 1180 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 33 EISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +I F+ + I + + + G NG GKS++ +AI ++ +++ Sbjct: 8 QIQGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDLI 67 Query: 92 IK 93 K Sbjct: 68 YK 69 >gi|195446621|ref|XP_002070850.1| GK25447 [Drosophila willistoni] gi|194166935|gb|EDW81836.1| GK25447 [Drosophila willistoni] Length = 1201 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|170782498|ref|YP_001710831.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] gi|169157067|emb|CAQ02241.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] Length = 1010 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + F + I+FA+ L ++ G G GKS+L +A+ + YG Sbjct: 1 MDLHRLTLQAIGPFADEHVIDFAELGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLA 57 >gi|21675093|ref|NP_663158.1| recombination/replication protein RecF [Chlorobium tepidum TLS] gi|81790424|sp|Q8KA81|RECF_CHLTE RecName: Full=DNA replication and repair protein recF gi|21648334|gb|AAM73500.1| recombination/replication protein RecF [Chlorobium tepidum TLS] Length = 368 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWL 73 +L I I++FR +EF +T + G+NG GK+S+ EAI + Sbjct: 1 MRLDSISIANFRNH---TLLEFEPGHSITNIYGRNGSGKTSILEAIHYC 46 >gi|327267570|ref|XP_003218572.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3-like [Anolis carolinensis] Length = 1217 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 3 LFQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 49 >gi|254302376|ref|ZP_04969734.1| recombination protein F [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322568|gb|EDK87818.1| recombination protein F [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 369 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENTSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|146279542|ref|YP_001169700.1| ATP-dependent exoDNAse beta subunit [Rhodobacter sphaeroides ATCC 17025] gi|145557783|gb|ABP72395.1| ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 657 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I +S+FR F + I ++LT + G NG GK+++ A+ LF +R Sbjct: 1 MKIETITLSNFRCFGADPVVISLEENLTALVGNNGSGKTAVFMALARLFGATAAQR 56 >gi|115522033|ref|YP_778944.1| recombination protein F [Rhodopseudomonas palustris BisA53] gi|115515980|gb|ABJ03964.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris BisA53] Length = 379 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ + ++HFR + + L ++ G NG GK++ EAI L G RR D Sbjct: 3 VSRIHRLTLTHFRNYAA-ASLRVNADLVVLAGPNGAGKTNCLEAISLLSPGRGLRRATLD 61 Query: 86 SIKKRSIK 93 I Sbjct: 62 DIADNQGD 69 >gi|212632927|ref|YP_002309452.1| recombination protein F [Shewanella piezotolerans WP3] gi|226737834|sp|B8CH73|RECF_SHEPW RecName: Full=DNA replication and repair protein recF gi|212554411|gb|ACJ26865.1| DNA replication and repair protein RecF [Shewanella piezotolerans WP3] Length = 360 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR T +++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLNRLHIEAFRNITS-AQLQPGDGLNVIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|254437923|ref|ZP_05051417.1| hypothetical protein OA307_2793 [Octadecabacter antarcticus 307] gi|198253369|gb|EDY77683.1| hypothetical protein OA307_2793 [Octadecabacter antarcticus 307] Length = 369 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +SHFR + ++ + G NG GK+++ EA+ L G RR + + Sbjct: 6 LSHLTLSHFRSH-KRATLDLDGRTVAIYGPNGAGKTNILEAVSILSPGRGLRRASSEDMT 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|138894432|ref|YP_001124885.1| hypothetical protein GTNG_0760 [Geobacillus thermodenitrificans NG80-2] gi|134265945|gb|ABO66140.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 937 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSL 66 + K S K ++ ++I +F+GF +I EF + I+ NG GK+S Sbjct: 66 IGKREKSVLTTKKDLRINSVQIKNFKGFGQISDEDRGVLFEFNKYKNILFAPNGGGKTSF 125 Query: 67 SEAIEWLFYGYTQRRKH 83 EA+E+ + Sbjct: 126 CEALEYALTNNIKECVR 142 >gi|268572561|ref|XP_002641353.1| C. briggsae CBR-SMC-3 protein [Caenorhabditis briggsae] Length = 1204 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 I ++ + I+ FR + + + F+ +V G+NG GKS+ AI+++ Sbjct: 3 IKEVRLVRINGFRSYKDNTHVSGFSPRSNVVVGRNGSGKSNFFHAIQFVL 52 >gi|172056049|ref|YP_001812509.1| DNA replication and repair protein RecF [Exiguobacterium sibiricum 255-15] gi|226737799|sp|B1YGB5|RECF_EXIS2 RecName: Full=DNA replication and repair protein recF gi|171988570|gb|ACB59492.1| DNA replication and repair protein RecF [Exiguobacterium sibiricum 255-15] Length = 384 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + +SH+R + E ++ F++ ++ G+N GK++L EAI L + R H Sbjct: 1 MRLDSVRLSHYRNY-ESLELSFSEKTNVLIGENAQGKTNLLEAIYVLALAKSHRTTHDKE 59 Query: 87 IKKRSIKTPM 96 + + +T Sbjct: 60 LIQWDAETAR 69 >gi|260773799|ref|ZP_05882714.1| exonuclease SbcC [Vibrio metschnikovii CIP 69.14] gi|260610760|gb|EEX35964.1| exonuclease SbcC [Vibrio metschnikovii CIP 69.14] Length = 1014 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F F Q ++F+ L ++NG G GKSSL +AI + YG T + Sbjct: 1 MRPITLTLQAFGPFASQQVVDFSAFGHAPLFLINGPTGAGKSSLLDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|227529859|ref|ZP_03959908.1| recombination protein F [Lactobacillus vaginalis ATCC 49540] gi|227350228|gb|EEJ40519.1| recombination protein F [Lactobacillus vaginalis ATCC 49540] Length = 374 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +FR + ++ + FA + ++ G N GK+++ EAI L + R + + Sbjct: 3 LSELHLHNFRNYEDLT-VHFAPGVNVLIGHNAQGKTNMLEAIYALSLTRSHRTHNNRELI 61 Query: 89 KRSIKT 94 K+ Sbjct: 62 NWQHKS 67 >gi|153828394|ref|ZP_01981061.1| RecF/RecN/SMC N domain protein [Vibrio cholerae 623-39] gi|148876103|gb|EDL74238.1| RecF/RecN/SMC N domain protein [Vibrio cholerae 623-39] Length = 617 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +++ +FR + +++ +EF L ++ G+N GK+++ ++I+++ + Sbjct: 1 MYLHCLKLENFRRYKQLE-VEFNSGLNLLVGENDSGKTAIIDSIKYVLNTQSYEYLR 56 >gi|332071496|gb|EGI81990.1| DNA replication and repair recF domain protein [Streptococcus pneumoniae GA41301] Length = 63 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + E KI+F L + G+N GK+++ EAI +L + R + + Sbjct: 1 MWLQHLSLKTFRNYKE-TKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKN 59 Query: 87 IKK 89 + + Sbjct: 60 LIQ 62 >gi|310765872|gb|ADP10822.1| DNA replication and repair protein recF [Erwinia sp. Ejp617] Length = 397 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 9/91 (9%) Query: 3 RLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYG 62 + R+ T AC S + L + I FR E + A + G NG G Sbjct: 21 KTRRCYTIACFGISS--------VMALTRLLIKDFRNI-ENADLALAPGFNFLVGPNGSG 71 Query: 63 KSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 K+S+ EAI L +G R + + Sbjct: 72 KTSVLEAIYTLGHGRAFRSLQAGRVIRHDQD 102 >gi|219850705|ref|YP_002465137.1| SMC domain protein [Methanosphaerula palustris E1-9c] gi|219544964|gb|ACL15414.1| SMC domain protein [Methanosphaerula palustris E1-9c] Length = 862 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + L+ + I + R + E I+F+ +++ +G G GKS++ AIE+ +G Sbjct: 1 MLHLVHLRIQNIRSYGEEPITIDFSPGISLFSGDIGSGKSTILSAIEFGLFG 52 >gi|163757765|ref|ZP_02164854.1| putative DNA replication and repair protein [Hoeflea phototrophica DFL-43] gi|162285267|gb|EDQ35549.1| putative DNA replication and repair protein [Hoeflea phototrophica DFL-43] Length = 382 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++ FR + Q +E ++ G NG GK++L EA+ L G RR Sbjct: 5 VHIERLKLTGFRNYAS-QSLELDARHVVLVGDNGAGKTNLMEAVSLLSPGRGMRRAPYSD 63 Query: 87 IKKRSIK 93 + K + Sbjct: 64 VIKAGSE 70 >gi|329944738|ref|ZP_08292817.1| DNA replication and repair protein RecF [Actinomyces sp. oral taxon 170 str. F0386] gi|328529874|gb|EGF56764.1| DNA replication and repair protein RecF [Actinomyces sp. oral taxon 170 str. F0386] Length = 405 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + + + G NG GK++L EAI +L + R + Sbjct: 1 MYVSDLSLDDFRSYRNLV-LSLEPGPSAFVGSNGQGKTNLVEAIVYLATLSSHRIGADTA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + +R++ AV R + Sbjct: 60 LVRRAVPGQSQPAGAVVRAR 79 >gi|326389382|ref|ZP_08210950.1| SMC domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325994745|gb|EGD53169.1| SMC domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 1177 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|314987109|gb|EFT31201.1| recombination protein F [Propionibacterium acnes HL005PA2] gi|314990689|gb|EFT34780.1| recombination protein F [Propionibacterium acnes HL005PA3] Length = 401 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + A T G NG GK++L EA+E+L + R + Sbjct: 8 MFVERLELVDFRSYV-CADVPMAAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVSNDTP 66 Query: 87 IKKRSIKT 94 + + Sbjct: 67 LVRLGADQ 74 >gi|302384637|ref|YP_003820459.1| hypothetical protein Closa_0193 [Clostridium saccharolyticum WM1] gi|302195265|gb|ADL02836.1| hypothetical protein Closa_0193 [Clostridium saccharolyticum WM1] Length = 878 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 19/95 (20%) Query: 27 FKLLDIEISHFRGFTEIQKIE----FAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ + I +FRG+ E + F I +G NG+GK+ EAIEW G Sbjct: 1 MRIAKVYIKNFRGYGENNTTDEMYLFEHLNDADFVIFSGYNGFGKTGFFEAIEWCITGKI 60 Query: 79 ---------QRR--KHGDSIKKRSIKTPMPMCMAV 102 + K +K +S K + V Sbjct: 61 KGLQETDIYAKNTMKKSSYLKFQSRKEKREREVVV 95 >gi|298712757|emb|CBJ33353.1| conserved unknown protein [Ectocarpus siliculosus] Length = 442 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F+ Q IEF LT++ G NG GK+++ E +++ G Sbjct: 4 IHKLSIRGIRSFSHEREQVIEFYTPLTMIVGANGCGKTTIIECLKYACTG 53 >gi|328911097|gb|AEB62693.1| DNA repair exonuclease subunit C [Bacillus amyloliquefaciens LL3] Length = 1130 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F E Q I+F + + G G GKSS+ +A+ YG +R + Sbjct: 6 LTIKGLHSFREEQTIDFDGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAAN 61 >gi|297580315|ref|ZP_06942242.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535961|gb|EFH74795.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 1013 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFVGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYADPESL 76 >gi|225558965|gb|EEH07248.1| DNA repair protein rad50 [Ajellomyces capsulatus G186AR] Length = 1454 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I K+ + I R F + + I+F LT++ G NG GK+++ E +++ G Sbjct: 154 ISKIDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 206 >gi|315230679|ref|YP_004071115.1| DNA double-strand break repair rad50 ATPase [Thermococcus barophilus MP] gi|315183707|gb|ADT83892.1| DNA double-strand break repair rad50 ATPase [Thermococcus barophilus MP] Length = 883 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 ++ I + FR E K+ F + ++ GQNG GKSSL +AI Y + + D Sbjct: 1 MRIEKIIVRDFRSH-EFTKVTFTSGINLIIGQNGSGKSSLLDAILIGLYWPAKPKDLKKD 59 Query: 86 SIKKRSIKT 94 S + + K+ Sbjct: 60 SFLRVNGKS 68 >gi|195035357|ref|XP_001989144.1| GH10207 [Drosophila grimshawi] gi|193905144|gb|EDW04011.1| GH10207 [Drosophila grimshawi] Length = 1348 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I ++++ +F+ + + F T + G NG GKS++ +++ ++F Sbjct: 72 SMESVGPRLIIKRIVNY---NFKSYAGEVSLGPFHHSFTAIIGPNGSGKSNVIDSMMFVF 128 Query: 75 Y 75 Sbjct: 129 G 129 >gi|254285134|ref|ZP_04960100.1| exonuclease SbcC, putative [Vibrio cholerae AM-19226] gi|150425137|gb|EDN16914.1| exonuclease SbcC, putative [Vibrio cholerae AM-19226] Length = 1013 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFVGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYADPESL 76 >gi|153212440|ref|ZP_01948209.1| exonuclease SbcC, putative [Vibrio cholerae 1587] gi|124116477|gb|EAY35297.1| exonuclease SbcC, putative [Vibrio cholerae 1587] Length = 1013 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFVGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYADPESL 76 >gi|18308986|ref|NP_560920.1| recombination protein F [Clostridium perfringens str. 13] gi|110801062|ref|YP_694479.1| recombination protein F [Clostridium perfringens ATCC 13124] gi|110802319|ref|YP_697355.1| recombination protein F [Clostridium perfringens SM101] gi|168207733|ref|ZP_02633738.1| DNA replication and repair protein RecF [Clostridium perfringens E str. JGS1987] gi|168212007|ref|ZP_02637632.1| DNA replication and repair protein RecF [Clostridium perfringens B str. ATCC 3626] gi|168215270|ref|ZP_02640895.1| DNA replication and repair protein RecF [Clostridium perfringens CPE str. F4969] gi|168218303|ref|ZP_02643928.1| DNA replication and repair protein RecF [Clostridium perfringens NCTC 8239] gi|169343436|ref|ZP_02864436.1| DNA replication and repair protein RecF [Clostridium perfringens C str. JGS1495] gi|182627052|ref|ZP_02954777.1| DNA replication and repair protein RecF [Clostridium perfringens D str. JGS1721] gi|20978577|sp|Q8XPF9|RECF_CLOPE RecName: Full=DNA replication and repair protein recF gi|122956936|sp|Q0SWY1|RECF_CLOPS RecName: Full=DNA replication and repair protein recF gi|123345112|sp|Q0TV61|RECF_CLOP1 RecName: Full=DNA replication and repair protein recF gi|18143661|dbj|BAB79710.1| DNA repair and genetic recombination protein [Clostridium perfringens str. 13] gi|110675709|gb|ABG84696.1| DNA replication and repair protein RecF [Clostridium perfringens ATCC 13124] gi|110682820|gb|ABG86190.1| DNA replication and repair protein RecF [Clostridium perfringens SM101] gi|169298388|gb|EDS80477.1| DNA replication and repair protein RecF [Clostridium perfringens C str. JGS1495] gi|170660924|gb|EDT13607.1| DNA replication and repair protein RecF [Clostridium perfringens E str. JGS1987] gi|170710063|gb|EDT22245.1| DNA replication and repair protein RecF [Clostridium perfringens B str. ATCC 3626] gi|170713334|gb|EDT25516.1| DNA replication and repair protein RecF [Clostridium perfringens CPE str. F4969] gi|177907578|gb|EDT70217.1| DNA replication and repair protein RecF [Clostridium perfringens D str. JGS1721] gi|182379694|gb|EDT77173.1| DNA replication and repair protein RecF [Clostridium perfringens NCTC 8239] Length = 361 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + E I+ ++ + G N GK+++ EAI + + + R Sbjct: 1 MYIKSLQLINYRNY-ENLSIKLCPNVNVFIGDNAQGKTNVIEAIYYCGFAKSHRTNRDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIE 62 >gi|147671875|ref|YP_001215295.1| putative exonuclease SbcC [Vibrio cholerae O395] gi|262169057|ref|ZP_06036750.1| exonuclease SbcC [Vibrio cholerae RC27] gi|146314258|gb|ABQ18798.1| putative exonuclease SbcC [Vibrio cholerae O395] gi|227015427|gb|ACP11636.1| putative exonuclease SbcC [Vibrio cholerae O395] gi|262022338|gb|EEY41046.1| exonuclease SbcC [Vibrio cholerae RC27] Length = 1013 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFVGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 HGDSIKKRSIKTPMPM 98 + P + Sbjct: 61 RTGDQMRCDYADPESL 76 >gi|158311871|ref|YP_001504379.1| DNA replication and repair protein RecF [Frankia sp. EAN1pec] gi|158107276|gb|ABW09473.1| DNA replication and repair protein RecF [Frankia sp. EAN1pec] Length = 457 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + + + +T G NG GK++L EAI ++ + R + Sbjct: 1 MHLTHLSLTDFRSYARLDLV-LEPGVTTFVGSNGQGKTNLIEAIGFVATLGSHRVANDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVREG 64 >gi|328552687|gb|AEB23179.1| DNA repair exonuclease subunit C [Bacillus amyloliquefaciens TA208] Length = 1130 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F E Q I+F + + G G GKSS+ +A+ YG +R + Sbjct: 6 LTIKGLHSFREEQTIDFDGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAAN 61 >gi|307151040|ref|YP_003886424.1| exonuclease SbcC [Cyanothece sp. PCC 7822] gi|306981268|gb|ADN13149.1| exonuclease SbcC [Cyanothece sp. PCC 7822] Length = 1007 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H V G NG GKSSL E I W +G ++ D I Sbjct: 4 LQLTLKNFLSYRE-ASLDFRGLHTACVCGANGAGKSSLLEGITWAIWGESRANTEDDVI 61 >gi|194764338|ref|XP_001964287.1| GF21472 [Drosophila ananassae] gi|190619212|gb|EDV34736.1| GF21472 [Drosophila ananassae] Length = 1190 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|153854252|ref|ZP_01995551.1| hypothetical protein DORLON_01545 [Dorea longicatena DSM 13814] gi|149753027|gb|EDM62958.1| hypothetical protein DORLON_01545 [Dorea longicatena DSM 13814] Length = 374 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +++ +FR + ++ +EF I G N GK+++ EA+ + R Sbjct: 12 LKVNSLKLKNFRNY-DLLNVEFDGSTNIFYGNNAQGKTNILEAVYLSGTTKSHRGSKDRD 70 Query: 87 IKKRSIK 93 + + Sbjct: 71 MIRFGED 77 >gi|124003422|ref|ZP_01688271.1| ATP-binding protein [Microscilla marina ATCC 23134] gi|123990991|gb|EAY30443.1| ATP-binding protein [Microscilla marina ATCC 23134] Length = 449 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 K+ ++E+++FRGF + KI+F D+ L + G NG GKSS+ +A+ Sbjct: 1 MKIKELELNNFRGFKHL-KIQFPDNNLAVFIGTNGSGKSSVLDAL 44 >gi|74220594|dbj|BAE31509.1| unnamed protein product [Mus musculus] Length = 337 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|308173042|ref|YP_003919747.1| DNA repair exonuclease subunit C [Bacillus amyloliquefaciens DSM 7] gi|307605906|emb|CBI42277.1| DNA repair exonuclease subunit C [Bacillus amyloliquefaciens DSM 7] Length = 1130 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F E Q I+F + + G G GKSS+ +A+ YG +R + Sbjct: 6 LTIKGLHSFREEQTIDFDGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAAN 61 >gi|296392443|ref|YP_003657327.1| DNA replication and repair protein RecF [Segniliparus rotundus DSM 44985] gi|296179590|gb|ADG96496.1| DNA replication and repair protein RecF [Segniliparus rotundus DSM 44985] Length = 401 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ EI FR + E + + T+ G+NGYGK++L EA+ L + R + Sbjct: 1 MRVSSFEIRDFRSW-EHAAMRLDEGCTLFLGRNGYGKTNLVEALGVLSSLSSHRGAQNAA 59 Query: 87 IKKRS 91 + +R Sbjct: 60 MVRRG 64 >gi|289548324|ref|YP_003473312.1| SMC domain protein [Thermocrinis albus DSM 14484] gi|289181941|gb|ADC89185.1| SMC domain protein [Thermocrinis albus DSM 14484] Length = 953 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +++ +FR F +++F+ + ++ G+ G GKSS+ +AI + YG R Sbjct: 1 MRPIRLKLKNFRIFRGEHEVDFSCLNFFVIQGRTGSGKSSIVDAICYALYGRVPREGSKP 60 Query: 86 SIKKRSIKTPMPM 98 + + + M Sbjct: 61 AHRNVISRGESRM 73 >gi|190348158|gb|EDK40565.2| hypothetical protein PGUG_04663 [Meyerozyma guilliermondii ATCC 6260] Length = 1210 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKRIVIQGFKTYKNATVIDLLSPHHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|260574427|ref|ZP_05842431.1| DNA replication and repair protein RecF [Rhodobacter sp. SW2] gi|259023323|gb|EEW26615.1| DNA replication and repair protein RecF [Rhodobacter sp. SW2] Length = 366 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F + G NG GK+++ EA+ L G RR D I Sbjct: 6 ITSLSLSHFRSHRA-ARLHFDGRPVALVGPNGAGKTNVLEAVSLLSPGRGLRRAGVDEIA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|254567069|ref|XP_002490645.1| DNA repair protein RAD50 [Pichia pastoris GS115] gi|238030441|emb|CAY68365.1| DNA repair protein RAD50 [Pichia pastoris GS115] Length = 1323 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + I+F+ LT++ GQNG GK+++ E +++ G Sbjct: 30 IYKLAIQGVRSFDPHTPETIQFSKPLTLIVGQNGSGKTTIIECLKYATTG 79 >gi|227498786|ref|ZP_03928926.1| recombination protein F [Acidaminococcus sp. D21] gi|226904238|gb|EEH90156.1| recombination protein F [Acidaminococcus sp. D21] Length = 377 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + + HFR + ++ + + LT++ G+N GK++L E + + G++ R +H + + K Sbjct: 1 MRLHHFRNYGDLT-MNLSHDLTVIYGRNAQGKTNLLEGLYYAAMGFSFRSRHDEELVKFG 59 >gi|218247961|ref|YP_002373332.1| hypothetical protein PCC8801_3199 [Cyanothece sp. PCC 8801] gi|218168439|gb|ACK67176.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] Length = 693 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+ I++ +FR F + TI++G NG GK+++ W+ Y Sbjct: 1 MKLISIKLCNFRQFYGKTPEIILASGEKNTTIIHGNNGAGKTTILNTFTWVLYE 54 >gi|166033147|ref|ZP_02235976.1| hypothetical protein DORFOR_02869 [Dorea formicigenerans ATCC 27755] gi|166027504|gb|EDR46261.1| hypothetical protein DORFOR_02869 [Dorea formicigenerans ATCC 27755] Length = 524 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ ++ + +F FT + I F+D + ++ G+N GKS+L I + +G + R Sbjct: 1 MKIKELRLKNFGKFTNKE-IHFSDGMNVIYGENESGKSTLYTFIRAMLFGLERGRGR 56 >gi|300707494|ref|XP_002995952.1| hypothetical protein NCER_101026 [Nosema ceranae BRL01] gi|239605199|gb|EEQ82281.1| hypothetical protein NCER_101026 [Nosema ceranae BRL01] Length = 1045 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + +++F+ F +I F+ L + G NG GKS++S A+ +F G + ++K Sbjct: 12 IISLYLTNFQTFKS-SRIRFSPSLNFIIGPNGSGKSTISNALSLIFGGTPKTIGKTKNLK 70 Query: 89 K 89 + Sbjct: 71 E 71 >gi|238018220|ref|ZP_04598646.1| hypothetical protein VEIDISOL_00044 [Veillonella dispar ATCC 17748] gi|237864691|gb|EEP65981.1| hypothetical protein VEIDISOL_00044 [Veillonella dispar ATCC 17748] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + ++ I+F + +++G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKDVT-IQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNAEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|257060715|ref|YP_003138603.1| hypothetical protein Cyan8802_2920 [Cyanothece sp. PCC 8802] gi|256590881|gb|ACV01768.1| conserved hypothetical protein [Cyanothece sp. PCC 8802] Length = 693 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+ I++ +FR F + TI++G NG GK+++ W+ Y Sbjct: 1 MKLISIKLCNFRQFYGKTPEIILASGEKNTTIIHGNNGAGKTTILNTFTWVLYE 54 >gi|167904485|ref|ZP_02491690.1| putative GTP-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 882 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL + I R F + +I + AD + + G N GKS+++EAI F+ Sbjct: 1 MTMKLSRLRIEQLRKFRQPAQIGDLADGINLFVGPNEAGKSTIAEAIRAAFFE 53 >gi|167628098|ref|YP_001678598.1| DNA replication and repair protein RecF [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|259563369|sp|B0U178|RECF_FRAP2 RecName: Full=DNA replication and repair protein recF gi|167598099|gb|ABZ88097.1| DNA replication and repair protein RecF [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 349 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR I+ +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYIANLRLQNFRNIP-IKSFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|163745037|ref|ZP_02152397.1| recombination protein F [Oceanibulbus indolifex HEL-45] gi|161381855|gb|EDQ06264.1| recombination protein F [Oceanibulbus indolifex HEL-45] Length = 365 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ +SHFR I+ + G NG GK+++ EAI L G RR Sbjct: 4 LYLSNLSLSHFRSHR-RAVIDVDVRPVALYGPNGAGKTNIIEAISLLSPGRGLRRTSAQD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MARR 66 >gi|326329134|ref|ZP_08195462.1| RecF protein [Nocardioidaceae bacterium Broad-1] gi|325953021|gb|EGD45033.1| RecF protein [Nocardioidaceae bacterium Broad-1] Length = 382 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + ++ +T G+NG GK++L EAI++L + R Sbjct: 1 MYVSHLSLHDFRSYP-NVEVPLEAGVTAFVGRNGQGKTNLVEAIDYLSRLQSHRVATDAP 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LVRAGAEQ 67 >gi|322692510|gb|EFY84416.1| DNA repaire protein UVS6 [Metarhizium acridum CQMa 102] Length = 1307 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + IS R F+ + I+F LT++ G NG GK+++ E +++ G G Sbjct: 3 RIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|269797073|ref|YP_003310973.1| DNA replication and repair protein RecF [Veillonella parvula DSM 2008] gi|269093702|gb|ACZ23693.1| DNA replication and repair protein RecF [Veillonella parvula DSM 2008] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + + +I+F + +++G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKD-VQIQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNAEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|256844122|ref|ZP_05549609.1| DNA helicase associated protein [Lactobacillus crispatus 125-2-CHN] gi|256614027|gb|EEU19229.1| DNA helicase associated protein [Lactobacillus crispatus 125-2-CHN] Length = 641 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 R + +L + I F+ F E KI+F+ T G NG GK++ A+ Sbjct: 2 RGIRLRLKTLLIKGFKSFNEETKIDFSKE-TAFIGTNGSGKTACLLAL 48 >gi|195134412|ref|XP_002011631.1| GI10989 [Drosophila mojavensis] gi|193906754|gb|EDW05621.1| GI10989 [Drosophila mojavensis] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|218441463|ref|YP_002379792.1| exonuclease SbcC [Cyanothece sp. PCC 7424] gi|218174191|gb|ACK72924.1| exonuclease SbcC [Cyanothece sp. PCC 7424] Length = 1007 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H V G NG GKSSL EAI W +G ++ D I Sbjct: 4 LHLTLKNFLSYQE-ASLDFRGLHTACVCGANGAGKSSLLEAITWAIWGESRAASEDDVI 61 >gi|150865152|ref|XP_001384253.2| chromosome condensation and segregation protein [Scheffersomyces stipitis CBS 6054] gi|149386408|gb|ABN66224.2| chromosome condensation and segregation protein [Scheffersomyces stipitis CBS 6054] Length = 1011 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + H +V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIIIQGFKTYKNATVIDLVSPHHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|118097616|ref|XP_414645.2| PREDICTED: similar to RAD50 protein [Gallus gallus] Length = 1314 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPGTK 62 Query: 84 GDS 86 G+S Sbjct: 63 GNS 65 >gi|1335781|gb|AAC47078.1| Cap [Drosophila melanogaster] Length = 1231 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 32 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 80 >gi|307267164|ref|ZP_07548672.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917815|gb|EFN48081.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 1177 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|294794200|ref|ZP_06759336.1| DNA replication and repair protein RecF [Veillonella sp. 3_1_44] gi|294454530|gb|EFG22903.1| DNA replication and repair protein RecF [Veillonella sp. 3_1_44] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + + +I+F + +++G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKD-VQIQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNAEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|163797312|ref|ZP_02191265.1| recombination protein F [alpha proteobacterium BAL199] gi|159177403|gb|EDP61959.1| recombination protein F [alpha proteobacterium BAL199] Length = 410 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + ++ ++ G NG GK++L EA+ +L G RR + Sbjct: 27 VRRLTLTRFRNYAAE-SLDIDGPAVVLTGPNGAGKTNLLEAVSFLTPGRGLRRARLSEVD 85 Query: 89 KR 90 + Sbjct: 86 RL 87 >gi|158312746|ref|YP_001505254.1| hypothetical protein Franean1_0892 [Frankia sp. EAN1pec] gi|158108151|gb|ABW10348.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length = 890 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L I + FRG + + LT+V G+NG GKSS +EA E G T+R Sbjct: 82 VHLESIGVQGFRGIGPLAVLPLRPGPGLTLVTGRNGSGKSSFAEAAEIALTGDTRRWSRR 141 Query: 85 DSIKKRSIK 93 ++ + + Sbjct: 142 AAVWRGGWR 150 >gi|322778931|gb|EFZ09347.1| hypothetical protein SINV_80256 [Solenopsis invicta] Length = 1374 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 28 KLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K+ + + R F + + I F+ LT++ G NG GK+++ EA+++ G Sbjct: 3 KVRRLSLRGIRNFGDDSEDALIRFSCPLTLILGANGTGKTTIIEALKFATTGS 55 >gi|282848763|ref|ZP_06258158.1| putative recombination protein F [Veillonella parvula ATCC 17745] gi|282581549|gb|EFB86937.1| putative recombination protein F [Veillonella parvula ATCC 17745] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + + +I+F + +++G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKD-VQIQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNAEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|300913538|ref|ZP_07130855.1| SMC domain protein [Thermoanaerobacter sp. X561] gi|307723447|ref|YP_003903198.1| SMC domain-containing protein [Thermoanaerobacter sp. X513] gi|300890223|gb|EFK85368.1| SMC domain protein [Thermoanaerobacter sp. X561] gi|307580508|gb|ADN53907.1| SMC domain protein [Thermoanaerobacter sp. X513] Length = 1177 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLKIAGLNSFVEEQIIDFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|195479261|ref|XP_002100825.1| GE15959 [Drosophila yakuba] gi|194188349|gb|EDX01933.1| GE15959 [Drosophila yakuba] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|70993434|ref|XP_751564.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293] gi|66849198|gb|EAL89526.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L +++++ R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 2 ILSLKLNNVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 51 >gi|320116796|ref|YP_004186955.1| SMC domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929887|gb|ADV80572.1| SMC domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 1177 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|198468360|ref|XP_001354674.2| GA22046 [Drosophila pseudoobscura pseudoobscura] gi|198146378|gb|EAL31729.2| GA22046 [Drosophila pseudoobscura pseudoobscura] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|194891236|ref|XP_001977456.1| GG18245 [Drosophila erecta] gi|190649105|gb|EDV46383.1| GG18245 [Drosophila erecta] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|182416742|ref|ZP_02624843.2| DNA replication and repair protein RecF [Clostridium butyricum 5521] gi|237669606|ref|ZP_04529584.1| DNA replication and repair protein RecF [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379399|gb|EDT76894.1| DNA replication and repair protein RecF [Clostridium butyricum 5521] gi|237654840|gb|EEP52402.1| DNA replication and repair protein RecF [Clostridium butyricum E4 str. BoNT E BL5262] Length = 360 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +I ++++R + E +E + ++ + G N GK+++ EAI + + + R Sbjct: 1 MYIKNIMLANYRNY-ETLSLELSKNVNVFIGDNAQGKTNVLEAIYYCAFAKSHRTSKD 57 >gi|24642555|ref|NP_523374.2| Chromosome-associated protein, isoform A [Drosophila melanogaster] gi|22832385|gb|AAF48625.2| Chromosome-associated protein, isoform A [Drosophila melanogaster] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|328351032|emb|CCA37432.1| DNA repair protein RAD50 [Pichia pastoris CBS 7435] Length = 1342 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + I+F+ LT++ GQNG GK+++ E +++ G Sbjct: 49 IYKLAIQGVRSFDPHTPETIQFSKPLTLIVGQNGSGKTTIIECLKYATTG 98 >gi|228471631|ref|ZP_04056405.1| putative exonuclease SbcC [Capnocytophaga gingivalis ATCC 33624] gi|228277050|gb|EEK15736.1| putative exonuclease SbcC [Capnocytophaga gingivalis ATCC 33624] Length = 1017 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + E Q I+F+ L + G G GKSS+ EAI + YG T+R D Sbjct: 6 LTIEGIYSYQEKQHIDFSQLTDAGLFGIFGAVGSGKSSILEAITFALYGETERLNKADK 64 >gi|163757040|ref|ZP_02164146.1| putative DNA replication and repair protein [Kordia algicida OT-1] gi|161323044|gb|EDP94387.1| putative DNA replication and repair protein [Kordia algicida OT-1] Length = 376 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + L + + +++ F E +F + + G NG GK+++ +AI L +G + Sbjct: 16 IFMFLKKLSLINYKNF-ETNSFDFNQKINCLVGNNGVGKTNVLDAIYHLSFGKS 68 >gi|154332493|ref|XP_001562063.1| structural maintenance of chromosome 3 protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059511|emb|CAM37089.1| putative adaptor complex protein (AP) 3 delta subunit 1 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1198 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL----TIVNGQNGYGKSSLSEAIEWLFYG 76 + +I IS FR + E F D L ++ G+NG GKS+ A++++ Sbjct: 1 MFIKNIIISGFRSYREQS---FPDGLSSKVNVLVGKNGSGKSNFFAAVQFVLNE 51 >gi|66802390|ref|XP_629977.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|60463384|gb|EAL61572.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1373 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++I +F+ + I F D + V G NG GKS++ +AI ++ + + Sbjct: 1 MGISILKIQNFKSYKGNPLIGPFKD-FSCVIGPNGRGKSNIMDAIIFVLGHNSSQ 54 >gi|330685260|gb|EGG96921.1| DNA replication and repair protein RecF [Staphylococcus epidermidis VCU121] Length = 371 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E I+ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTIDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFDSE 66 >gi|327273419|ref|XP_003221478.1| PREDICTED: structural maintenance of chromosomes protein 1B-like [Anolis carolinensis] Length = 1236 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +F+ + Q I + V G NG GKS++ +A+ ++ Sbjct: 3 YLKLLVVENFKSWRGKQCIGPFKKFSCVIGPNGSGKSNVMDALSFVMGE 51 >gi|239637289|ref|ZP_04678276.1| DNA replication and repair protein RecF [Staphylococcus warneri L37603] gi|239597126|gb|EEQ79636.1| DNA replication and repair protein RecF [Staphylococcus warneri L37603] Length = 371 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E I+ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTIDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFDSE 66 >gi|227541368|ref|ZP_03971417.1| recombination protein F [Corynebacterium glucuronolyticum ATCC 51866] gi|227182919|gb|EEI63891.1| recombination protein F [Corynebacterium glucuronolyticum ATCC 51866] Length = 374 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E+ +E +T+ G NG+GK+++ E+I +L + R KH Sbjct: 1 MFVRHLTLKDFRSWPELD-LELGPGVTVFTGANGFGKTNIVESIYYLANLSSHRVKHDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRAGAD 66 >gi|195351484|ref|XP_002042264.1| GM13388 [Drosophila sechellia] gi|194124107|gb|EDW46150.1| GM13388 [Drosophila sechellia] Length = 1180 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|195154461|ref|XP_002018140.1| GL17546 [Drosophila persimilis] gi|194113936|gb|EDW35979.1| GL17546 [Drosophila persimilis] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I R F ++Q + F+ +T++ G+NG GK+++ E I++ G + Sbjct: 4 IDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGES 57 >gi|156552026|ref|XP_001603761.1| PREDICTED: similar to Smc1l1 protein [Nasonia vitripennis] Length = 1223 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +E+ +F+ + + E+A +T V G NG GKSS+ AI++ Sbjct: 10 LELENFKSYKNRTRFEWAALITAVVGLNGTGKSSVVNAIQYA 51 >gi|126460242|ref|YP_001056520.1| SMC domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249963|gb|ABO09054.1| SMC domain protein [Pyrobaculum calidifontis JCM 11548] Length = 795 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++++ +E+ +FR + ++E D + ++ G+ G GK+S+ AIE+ +G Sbjct: 1 MWRISRVELENFRSYRGAHRLELGD-VNLLWGRIGAGKTSVFYAIEYALFGQ 51 >gi|71834208|gb|AAZ41776.1| RE14758p [Drosophila melanogaster] Length = 1200 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|299144064|ref|ZP_07037144.1| putative exonuclease SBCC [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518549|gb|EFI42288.1| putative exonuclease SBCC [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 434 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + +E+ +F+ E I+F L ++ G + GK+++ AI+W Y Sbjct: 1 MIFITKVELINFQSH-ENTVIDFHRGLNVILGNSDSGKTAILRAIKWALY 49 >gi|262395332|ref|YP_003287185.1| exonuclease SbcC [Vibrio sp. Ex25] gi|262338926|gb|ACY52720.1| exonuclease SbcC [Vibrio sp. Ex25] Length = 1018 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTEVIDFEKLGRNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 RQGIQMRC 68 >gi|300707868|ref|XP_002996127.1| hypothetical protein NCER_100830 [Nosema ceranae BRL01] gi|239605398|gb|EEQ82456.1| hypothetical protein NCER_100830 [Nosema ceranae BRL01] Length = 843 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + DI + F+ + I + G NG GKS++ + I + +++ + Sbjct: 1 MYIKDIILDGFKIYENKTVIRNLTKSYNAITGLNGSGKSNIIDGIIFALGLESRKLLRAN 60 Query: 86 SIKKR 90 S+K+ Sbjct: 61 SLKEL 65 >gi|198458384|ref|XP_001361018.2| GA19522 [Drosophila pseudoobscura pseudoobscura] gi|198136325|gb|EAL25594.2| GA19522 [Drosophila pseudoobscura pseudoobscura] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I R F ++Q + F+ +T++ G+NG GK+++ E I++ G + Sbjct: 4 IDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGES 57 >gi|167038392|ref|YP_001665970.1| SMC domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166857226|gb|ABY95634.1| SMC domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 1180 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 4 MRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 63 Query: 83 HG 84 Sbjct: 64 KD 65 >gi|322705558|gb|EFY97143.1| DNA repaire protein UVS6 [Metarhizium anisopliae ARSEF 23] Length = 1307 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + IS R F+ + I+F LT++ G NG GK+++ E +++ G G Sbjct: 3 RIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|313893465|ref|ZP_07827035.1| DNA replication and repair protein RecF [Veillonella sp. oral taxon 158 str. F0412] gi|313441908|gb|EFR60330.1| DNA replication and repair protein RecF [Veillonella sp. oral taxon 158 str. F0412] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + + +I+F + +++G NG GK+++ E+I G + R Sbjct: 1 MRIDSLQLFQFRNYKD-VQIQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSD 59 Query: 87 I------------KKRSIKTPMPMCMAVPR 104 + K TP + + + R Sbjct: 60 MLMFNAEEAGIVVKFEKKDTPQKVNIKLFR 89 >gi|227432903|ref|ZP_03914847.1| recombination protein F [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351336|gb|EEJ41618.1| recombination protein F [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 374 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++ H+R ++++ +EF+ + + G+N GK++L E+I L + R Sbjct: 1 MELESLKLDHYRNYSDLT-LEFSSGVNVFLGENAQGKTNLLESIYVLALARSHRTSSDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LVQWQAK 66 >gi|195941151|ref|ZP_03086533.1| ATP/GTP-binding protein [Escherichia coli O157:H7 str. EC4024] Length = 49 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 28/44 (63%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L +++ +FRG+ +I + +T + G+N +GKS+L EA+ Sbjct: 1 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEAL 44 >gi|162455965|ref|YP_001618332.1| hypothetical protein sce7683 [Sorangium cellulosum 'So ce 56'] gi|161166547|emb|CAN97852.1| hypothetical protein sce7683 [Sorangium cellulosum 'So ce 56'] Length = 428 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY------GYTQR 80 ++ I + +FRGF + LT++ G NG GK+S +AI L G +R Sbjct: 1 MRISSIRLQNFRGFAACT-LSLDRPLTVLVGVNGAGKTSTLDAIVRLLGVTNRVPGRAKR 59 Query: 81 RKHGDSIKKRSIKTPMPM 98 I++ + + M Sbjct: 60 LLVDADIRRDAAGCEIDM 77 >gi|167038874|ref|YP_001661859.1| SMC domain-containing protein [Thermoanaerobacter sp. X514] gi|166853114|gb|ABY91523.1| SMC domain protein [Thermoanaerobacter sp. X514] Length = 1180 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++I+ F E Q I+F L + G G GKS++ +AI YG R Sbjct: 4 MRPLKLKIAGLNSFVEEQIIDFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 63 Query: 83 HG 84 Sbjct: 64 KD 65 >gi|116617178|ref|YP_817549.1| DNA replication and repair protein RecF [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272621|sp|Q040E6|RECF_LEUMM RecName: Full=DNA replication and repair protein recF gi|116096025|gb|ABJ61176.1| DNA replication and repair protein RecF [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 374 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++ H+R ++++ +EF+ + + G+N GK++L E+I L + R Sbjct: 1 MELESLKLDHYRNYSDLT-LEFSSGVNVFLGENAQGKTNLLESIYVLALARSHRTSSDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LVQWQAK 66 >gi|239611549|gb|EEQ88536.1| cohesin complex subunit [Ajellomyces dermatitidis ER-3] Length = 1266 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 37 FRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 F+ + + F D T + G NG GKS+ +AI ++ G ++ + Sbjct: 8 FKSYKGHHTLLFGDAFFTSIIGPNGSGKSNSMDAISFVL-GIKSSHLRSTHLRDLVYR 64 >gi|171691462|ref|XP_001910656.1| hypothetical protein [Podospora anserina S mat+] gi|170945679|emb|CAP71792.1| unnamed protein product [Podospora anserina S mat+] Length = 1421 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 11/74 (14%) Query: 42 EIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG------DSI-KKR 90 + I+F LT + G NG GKS++ EA+ W +G R G D++ K Sbjct: 368 DTIHIDFQQDLTPGLTFLIGDNGSGKSTIMEAMVWCQFGRCIRGGLGVNDVVNDNVGKDC 427 Query: 91 SIKTPMPMCMAVPR 104 +K A+ R Sbjct: 428 CVKLEFNNGYAITR 441 >gi|332309233|ref|NP_001193797.1| RAD50 homolog [Bos taurus] gi|296485646|gb|DAA27761.1| RAD50 homolog [Bos taurus] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|74096357|ref|NP_001027868.1| structural maintenance of chromosomes protein 6 [Takifugu rubripes] gi|82132692|sp|Q802R8|SMC6_TAKRU RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6 gi|28301617|emb|CAD65851.1| SMC6 protein [Takifugu rubripes] Length = 1090 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +++F + F ++ + G+NG GKS++ + G Q G S+K Sbjct: 55 VKSITLNNFMCHANLGPFAFGSNVNFIVGKNGSGKSAILTGLIVALGGNAQATNRGSSLK 114 >gi|332025475|gb|EGI65639.1| Structural maintenance of chromosomes protein 3 [Acromyrmex echinatior] Length = 1201 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 2 LKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL 48 >gi|325291519|ref|YP_004277383.1| recombination protein F [Agrobacterium sp. H13-3] gi|325059372|gb|ADY63063.1| recombination protein F [Agrobacterium sp. H13-3] Length = 375 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL ++++ FR + + D ++ G NG GK++L EA+ +L G RR Sbjct: 5 VSLLRLKLTDFRNYAA-ASLALDDRHVVLTGDNGSGKTNLLEAVSFLSPGRGLRRATLSD 63 Query: 87 IKKRSIK 93 + + + Sbjct: 64 VTRVGAE 70 >gi|322824448|gb|EFZ29852.1| DNA repair protein RAD50, putative [Trypanosoma cruzi] Length = 1342 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I+IS R F Q I F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEQIQISGVRSFDPNPAHRQTIVFQKPLTVILGKNGAGKTTIIEALLNACTGQ 56 >gi|307199390|gb|EFN80015.1| Structural maintenance of chromosomes protein 3 [Harpegnathos saltator] Length = 1201 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 2 LKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL 48 >gi|241668638|ref|ZP_04756216.1| DNA replication and repair protein RecF [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877171|ref|ZP_05249881.1| DNA replication and repair protein recF [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843192|gb|EET21606.1| DNA replication and repair protein recF [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 349 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR I+ +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYIANLRLQNFRNIP-IKSFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|154149903|ref|YP_001403521.1| SMC protein-like protein [Candidatus Methanoregula boonei 6A8] gi|153998455|gb|ABS54878.1| SMC protein-like protein [Methanoregula boonei 6A8] Length = 673 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT--------IVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + + R F +++F LT ++ G+NG GK++L E+I YG Sbjct: 1 MLLHSLTLENIRIFKGKNRLDFTPILTSDVKKPIILIGGKNGAGKTTLFESILLCLYGQH 60 Query: 79 QRRKHGDSIKKRSIKTPMPMCMAVPRCK 106 G + K + + VPR K Sbjct: 61 AP---GSLMSKTKYEQY--IRQIVPRSK 83 >gi|71652374|ref|XP_814845.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener] gi|70879853|gb|EAN92994.1| DNA repair protein RAD50, putative [Trypanosoma cruzi] Length = 1346 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I+IS R F Q I F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEQIQISGVRSFDPNPAHRQTIVFQKPLTVILGKNGAGKTTIIEALLNACTGQ 56 >gi|71409626|ref|XP_807148.1| RAD50 DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70871085|gb|EAN85297.1| RAD50 DNA repair protein, putative [Trypanosoma cruzi] Length = 675 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I+IS R F Q I F LT++ G+NG GK+++ EA+ G Sbjct: 4 IEQIQISGVRSFDPNPAHRQTIVFQKPLTVILGKNGAGKTTIIEALLNACTGQ 56 >gi|330960291|gb|EGH60551.1| ATP binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 441 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + + ++R F E IEF LTI++ +NG GK+S+ EAI Sbjct: 1 MNLTRLCLKNYRRFAEFD-IEFDPQLTIISARNGQGKTSVLEAIVAALG 48 >gi|321455448|gb|EFX66580.1| putative SMC4, structural maintenance of chromosome protein 4 [Daphnia pulex] Length = 1313 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + IE +F+ + Q + F T + G NG GKS++ +++ ++F GY + S+ Sbjct: 82 ITHIENFYFKSYAGKQVLGPFHKSFTSIIGPNGSGKSNVIDSMLFVF-GYRANKIRSKSV 140 >gi|71733832|ref|YP_273299.1| ATP binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554385|gb|AAZ33596.1| ATP binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 504 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I +L + + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 49 IVRLDTLRMQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 96 >gi|330984716|gb|EGH82819.1| hypothetical protein PLA107_06796 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 421 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + F Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFG 48 >gi|298485068|ref|ZP_07003165.1| Putative ATP binding protein SugR [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160478|gb|EFI01502.1| Putative ATP binding protein SugR [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 421 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + F Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFG 48 >gi|323340047|ref|ZP_08080313.1| hypothetical protein HMPREF0542_10744 [Lactobacillus ruminis ATCC 25644] gi|323092553|gb|EFZ35159.1| hypothetical protein HMPREF0542_10744 [Lactobacillus ruminis ATCC 25644] Length = 438 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +++I + + ++ + LTI+ G N GK+S+ +AI W G + Sbjct: 1 MAMKIAELQIENVKRVKAVKLEPSENGLTIIGGDNAQGKTSVLDAIVWALGGNKYK 56 >gi|312136017|ref|YP_004003355.1| SMC domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311776068|gb|ADQ05555.1| SMC domain protein [Caldicellulosiruptor owensensis OL] Length = 658 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E I FA I+ G+N GKS++ +AI+ + ++ Sbjct: 1 MYLHRVIIKNFRSI-EYIDITFAKGKNIIVGKNNCGKSNIIKAIDLVLGESNPAYVKNEN 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|296123944|ref|YP_003631722.1| SMC domain protein [Planctomyces limnophilus DSM 3776] gi|296016284|gb|ADG69523.1| SMC domain protein [Planctomyces limnophilus DSM 3776] Length = 653 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ + I +FR F + + F D+ T G NG GKS++ A+ F + Sbjct: 1 MKISQVRIQNFRSFRDET-VHF-DNYTCFVGSNGSGKSTILMALNVFFRNSS 50 >gi|256390521|ref|YP_003112085.1| SMC domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256356747|gb|ACU70244.1| SMC domain protein [Catenulispora acidiphila DSM 44928] Length = 422 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 14/66 (21%) Query: 29 LLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ------ 79 + IEI F+ F ++F+ T++ G N GKS++ +A+ +L + Sbjct: 3 ITRIEIDGFKSF-----VDFSLDLHPFTVLIGANASGKSNVLDAVRFLTTAVSADLPSAV 57 Query: 80 RRKHGD 85 GD Sbjct: 58 SSVRGD 63 >gi|239629613|ref|ZP_04672644.1| DNA repair ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065731|ref|YP_003787754.1| DNA repair ATPase [Lactobacillus casei str. Zhang] gi|239528299|gb|EEQ67300.1| DNA repair ATPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438138|gb|ADK17904.1| DNA repair ATPase [Lactobacillus casei str. Zhang] Length = 1041 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F + + ++F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MQLKQLHMQFFGPYADAV-VDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGGQMR 65 >gi|191637567|ref|YP_001986733.1| Exonuclease [Lactobacillus casei BL23] gi|190711869|emb|CAQ65875.1| Exonuclease [Lactobacillus casei BL23] gi|327381612|gb|AEA53088.1| SMC domain protein [Lactobacillus casei LC2W] gi|327384778|gb|AEA56252.1| SMC domain protein [Lactobacillus casei BD-II] Length = 1041 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F + + ++F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MQLKQLHMQFFGPYADAV-VDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGGQMR 65 >gi|116494232|ref|YP_805966.1| DNA repair ATPase [Lactobacillus casei ATCC 334] gi|116104382|gb|ABJ69524.1| DNA repair ATPase [Lactobacillus casei ATCC 334] Length = 1041 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F + + ++F D L +++G G GK+++ +A+ + YG T + Sbjct: 1 MQLKQLHMQFFGPYADAV-VDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGER 59 Query: 83 HGDSIK 88 G ++ Sbjct: 60 DGGQMR 65 >gi|256545953|ref|ZP_05473308.1| DNA replication and repair protein RecF [Anaerococcus vaginalis ATCC 51170] gi|256398375|gb|EEU11997.1| DNA replication and repair protein RecF [Anaerococcus vaginalis ATCC 51170] Length = 357 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++++ FR + Q IEF +++ I G N GK++L E+I +L + + Sbjct: 1 MWIQNLKLNKFRNYLS-QNIEFNENINIFLGDNAQGKTNLLESIYYLANAKSFKSFRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|126664800|ref|ZP_01735784.1| ATPase [Marinobacter sp. ELB17] gi|126631126|gb|EBA01740.1| ATPase [Marinobacter sp. ELB17] Length = 429 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-----EWLFY 75 L +I++ +FR F E Q + ++ G NG GK++L +AI WL Sbjct: 1 MNLKEIKLKNFRCF-EEQSFQLHPEFNLIVGINGSGKTALLDAISVVIATWLLG 53 >gi|254465577|ref|ZP_05078988.1| RecF/RecN/SMC N terminal domain protein [Rhodobacterales bacterium Y4I] gi|206686485|gb|EDZ46967.1| RecF/RecN/SMC N terminal domain protein [Rhodobacterales bacterium Y4I] Length = 687 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I + F+ + KI D +TI+ G NG GKSS+ +A+ W + Sbjct: 127 LTGITVRGFKA-AKEAKIPLGD-VTILVGPNGCGKSSVLQAVHWAARAAS 174 >gi|78484349|ref|YP_390274.1| DNA replication and repair protein RecF [Thiomicrospira crunogena XCL-2] gi|123556168|sp|Q31JS3|RECF_THICR RecName: Full=DNA replication and repair protein recF gi|78362635|gb|ABB40600.1| DNA replication and repair protein RecF [Thiomicrospira crunogena XCL-2] Length = 362 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L ++ HFR E + F + L ++ G N GK++L EAI L G + R + Sbjct: 3 KILQFQLQHFRNI-EQASLTFGEGLNLIVGDNAAGKTALIEAIWTLASGRSFRTAKPHQL 61 Query: 88 KKRSI 92 +++ Sbjct: 62 IQQNQ 66 >gi|326479028|gb|EGE03038.1| DNA repair protein Rad50 [Trichophyton equinum CBS 127.97] Length = 690 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 25 ISKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 77 >gi|257469919|ref|ZP_05634011.1| exonuclease SBCC [Fusobacterium ulcerans ATCC 49185] gi|317064148|ref|ZP_07928633.1| exonuclease SBCC [Fusobacterium ulcerans ATCC 49185] gi|313689824|gb|EFS26659.1| exonuclease SBCC [Fusobacterium ulcerans ATCC 49185] Length = 932 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + ++R + +EF + ++ G+NG GKSS+ EAI + + R + Sbjct: 1 MKINRIHLENYRIH-DKLDVEFDSGINLLLGENGKGKSSILEAIGYALFDSELRGGNQRE 59 Query: 87 IKKRSIKTPM 96 K K+ Sbjct: 60 AIKYGKKSAK 69 >gi|116284089|gb|AAI18123.1| SMC4 protein [Bos taurus] Length = 343 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|111225155|ref|YP_715949.1| chromosome partition protein smc [Frankia alni ACN14a] gi|111152687|emb|CAJ64428.1| Chromosome partition protein smc [Frankia alni ACN14a] Length = 1249 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 57 GQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 G NG GKS++ +AI W+ + G ++ Sbjct: 2 GPNGSGKSNVVDAIAWVLGEQGAKALRGGTMSD 34 >gi|27545259|ref|NP_775360.1| structural maintenance of chromosomes protein 4 [Danio rerio] gi|20977563|gb|AAM28209.1| structural maintenance of chromosomes family member SMC4-like protein 1 [Danio rerio] Length = 1289 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|20806546|ref|NP_621717.1| recombinational DNA repair ATPase [Thermoanaerobacter tengcongensis MB4] gi|254478930|ref|ZP_05092292.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] gi|51316490|sp|Q8RDL3|RECF_THETN RecName: Full=DNA replication and repair protein recF gi|20514983|gb|AAM23321.1| Recombinational DNA repair ATPase [Thermoanaerobacter tengcongensis MB4] gi|214035152|gb|EEB75864.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] Length = 364 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I + +FR + QK+EF + + ++ G N GKS+L EAI L G R G Sbjct: 1 MYLKEIFVDNFRNL-KKQKLEFCEGVNLIYGLNAQGKSNLLEAIRLLSMG---RSFRGSK 56 Query: 87 I 87 + Sbjct: 57 M 57 >gi|293400898|ref|ZP_06645043.1| putative RecF/RecN/SMC N domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305924|gb|EFE47168.1| putative RecF/RecN/SMC N domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1009 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Query: 30 LDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +E+ F + + Q+I+F D L ++ G+ G GK+ L +A+ + YG + + D Sbjct: 4 KRLEVQAFGPYVKKQQIDFTQFMKDRLFLLEGETGSGKTMLLDAMTYALYGKSSGGQRED 63 Query: 86 --SIKKRSIKTPMP 97 S++ R MP Sbjct: 64 LESMRSRFASEQMP 77 >gi|258506999|ref|YP_003169750.1| DNA replication and repair protein recF [Lactobacillus rhamnosus GG] gi|257146926|emb|CAR85899.1| DNA replication and repair protein recF [Lactobacillus rhamnosus GG] gi|259648369|dbj|BAI40531.1| recombination protein RecF [Lactobacillus rhamnosus GG] Length = 372 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G+N GK++L EAI L + R + Sbjct: 1 MKLDHLTLKNYRNYATVDT-AFSPEINVLIGENAQGKTNLLEAIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRFGSD 66 >gi|229551100|ref|ZP_04439825.1| recombination protein F [Lactobacillus rhamnosus LMS2-1] gi|258538196|ref|YP_003172695.1| DNA replication and repair protein recF [Lactobacillus rhamnosus Lc 705] gi|229315561|gb|EEN81534.1| recombination protein F [Lactobacillus rhamnosus LMS2-1] gi|257149872|emb|CAR88844.1| DNA replication and repair protein recF [Lactobacillus rhamnosus Lc 705] Length = 372 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G+N GK++L EAI L + R + Sbjct: 1 MKLDHLTLKNYRNYATVDT-AFSPEINVLIGENAQGKTNLLEAIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRFGSD 66 >gi|221117832|ref|XP_002168808.1| PREDICTED: similar to DNA recombination/repair protein, partial [Hydra magnipapillata] Length = 103 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I R + + IEF LT++ G+NG GK+S+ E+++++ G Sbjct: 4 IEKMQIQGIRSYPPHDSAVIEFQTPLTLIVGKNGTGKTSIIESLKYITTG 53 >gi|119357165|ref|YP_911809.1| SMC domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354514|gb|ABL65385.1| SMC domain protein [Chlorobium phaeobacteroides DSM 266] Length = 1224 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F+ D + + G G GKS++ +AI YG T R Sbjct: 1 MKILSLRFKNLNSLVGEWFIDFSAPEYVSDGIFAITGPTGSGKSTILDAISLALYGQTPR 60 >gi|33151998|ref|NP_873351.1| recombination protein F [Haemophilus ducreyi 35000HP] gi|51316363|sp|Q7VMW3|RECF_HAEDU RecName: Full=DNA replication and repair protein recF gi|33148220|gb|AAP95740.1| DNA replication and repair protein RecF [Haemophilus ducreyi 35000HP] Length = 360 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I++FR I +E + + G NG GK+SL EAI +L +G + + Sbjct: 1 MPLSRLLINNFRNLQAID-LELSPDFNFIVGHNGSGKTSLLEAIFYLGHGRSFKS 54 >gi|126290113|ref|XP_001366194.1| PREDICTED: similar to Rad50 [Monodelphis domestica] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIMGVRSFGIEDKDKQVITFFNPLTILVGPNGAGKTTIIECLKYISTG 55 >gi|318605174|emb|CBY26672.1| exonuclease SbcC [Yersinia enterocolitica subsp. palearctica Y11] Length = 183 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +EI FR + +F + + NG+GKSS +A+EW Sbjct: 1 MKIKKVEIQAFRAYNLKNNGIFDFTLENERTSNFVAIYAPNGFGKSSFYDAVEWAITNNL 60 Query: 79 QRRKHGDSIKK 89 + R GD +K Sbjct: 61 E-RISGDYNRK 70 >gi|307332512|ref|ZP_07611570.1| putative exonuclease [Streptomyces violaceusniger Tu 4113] gi|306881850|gb|EFN12978.1| putative exonuclease [Streptomyces violaceusniger Tu 4113] Length = 715 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT--QR 80 +L + ++ F F Q I+F + L +++G G GK+S+ +A+ + YG R Sbjct: 1 MRLHRLAVTAFGPFGATQGIDFDELSAAGLFLLHGPTGAGKTSVLDAVCYALYGQVPGAR 60 Query: 81 RKHGDSIK 88 + +G S++ Sbjct: 61 QGNGLSLR 68 >gi|326202827|ref|ZP_08192694.1| AAA ATPase [Clostridium papyrosolvens DSM 2782] gi|325986904|gb|EGD47733.1| AAA ATPase [Clostridium papyrosolvens DSM 2782] Length = 1049 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L ++IS F + + Q I+F + + +++G G GK+++ +AI + +G Sbjct: 1 MKPLKLKISAFGPYAKEQFIDFTTLNEQIFVISGPTGAGKTTVFDAISFALFGEASGSSR 60 Query: 84 GDSIKKR 90 + Sbjct: 61 DRDSLRS 67 >gi|332797961|ref|YP_004459461.1| homologous recombination repair protein Rad50 [Acidianus hospitalis W1] gi|332695696|gb|AEE95163.1| Rad50, homologous recombination repair enzyme [Acidianus hospitalis W1] Length = 863 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I + +F E +I F + + GQNG GK+S+ + I + + + R + Sbjct: 1 MKIEKIFLQNFLSH-ESSEINFKGSINAIVGQNGAGKTSIIDGIVFSLFSESSRGNIKNL 59 Query: 87 IKK 89 +KK Sbjct: 60 VKK 62 >gi|327266850|ref|XP_003218217.1| PREDICTED: structural maintenance of chromosomes protein 4-like [Anolis carolinensis] Length = 1279 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|291167015|gb|EFE29061.1| exonuclease SbcC [Filifactor alocis ATCC 35896] Length = 1043 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + +S F + + Q I+F L IV+G G GK+++ +AI + YG + Sbjct: 1 MKPIKLTLSGFITYRDTQTIDFTKFEQGSLFIVSGATGSGKTTIFDAICFALYGKISSQN 60 Query: 83 HGDSIKKRSI 92 G+ + RS Sbjct: 61 RGEGEELRSQ 70 >gi|288560363|ref|YP_003423849.1| DNA double-strand break repair protein Rad50 [Methanobrevibacter ruminantium M1] gi|288543073|gb|ADC46957.1| DNA double-strand break repair protein Rad50 [Methanobrevibacter ruminantium M1] Length = 932 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +++ +F+ + +++ ++++ G+NG GKSS+ EAI + + Sbjct: 4 KHLQLKNFKSHAD-TELDLDLGISLIVGENGAGKSSIFEAISFALF 48 >gi|302549933|ref|ZP_07302275.1| exonuclease [Streptomyces viridochromogenes DSM 40736] gi|302467551|gb|EFL30644.1| exonuclease [Streptomyces viridochromogenes DSM 40736] Length = 998 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L + I+ F F Q ++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLTITAFGPFGGTQTVDFDELSAAGLFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|300708743|ref|XP_002996545.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01] gi|239605855|gb|EEQ82874.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01] Length = 1147 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R + Q I+F LT++ GQNG GK++L E ++++ G G Sbjct: 4 LHKLVIKGVRSYNPNKAQTIDFQHPLTLIVGQNGTGKTTLIECLKYITTGTLPPNSKG 61 >gi|218247877|ref|YP_002373248.1| exonuclease SbcC [Cyanothece sp. PCC 8801] gi|218168355|gb|ACK67092.1| exonuclease SbcC [Cyanothece sp. PCC 8801] Length = 1008 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L++ + +F + + + F H + G NG GKSSL EAI W+ +G ++ D I Sbjct: 4 LELTLKNFLSY-QQATLNFRGLHTACICGANGAGKSSLLEAITWVIWGKSRAASDDDVI 61 >gi|160893408|ref|ZP_02074193.1| hypothetical protein CLOL250_00957 [Clostridium sp. L2-50] gi|156864803|gb|EDO58234.1| hypothetical protein CLOL250_00957 [Clostridium sp. L2-50] Length = 360 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I+++R + + I F + I+ G N GK+++ E+I + R Sbjct: 1 MYVESLNINNYRNY-DELFITFDKNTNILYGDNAQGKTNILESIYMAATTKSHRGSKDRE 59 Query: 87 IKKRSIK 93 I K + Sbjct: 60 IIKIGEE 66 >gi|126730158|ref|ZP_01745970.1| recombination protein F [Sagittula stellata E-37] gi|126709538|gb|EBA08592.1| recombination protein F [Sagittula stellata E-37] Length = 364 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +SHFR + I+ + G NG GK++L EA+ G RR Sbjct: 1 MYLSHLTLSHFRSH-KRVAIDVDLRPVAIWGPNGSGKTNLIEAVSLFSPGRGLRRASAQD 59 Query: 87 IKKR 90 + +R Sbjct: 60 MARR 63 >gi|195386590|ref|XP_002051987.1| GJ24094 [Drosophila virilis] gi|194148444|gb|EDW64142.1| GJ24094 [Drosophila virilis] Length = 1390 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I ++++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 72 SMESVGPRLIIKRIVNY---NFKSYAGEVELGPFHHSFTAIIGPNGSGKSNVIDSMMFVF 128 Query: 75 Y 75 Sbjct: 129 G 129 >gi|225555768|gb|EEH04059.1| condensin subunit [Ajellomyces capsulatus G186AR] Length = 1192 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Query: 27 FKLLDIEISHFRGFTEIQKI------EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++++ I F+ + I + + G NG GKS++ ++I ++ Sbjct: 1 MRIVEVIIDGFKSYAVRTVISGWWVLRLDESFNSITGLNGSGKSNILDSICFVLGITNMS 60 Query: 81 RKHGDSIKKRSIK 93 +++ K Sbjct: 61 TVRAQNLQDLIYK 73 >gi|198474490|ref|XP_002132702.1| GA25741 [Drosophila pseudoobscura pseudoobscura] gi|198138414|gb|EDY70104.1| GA25741 [Drosophila pseudoobscura pseudoobscura] Length = 234 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ I + +F F E ++EF + + G+NG GKS+ A+ G + SI Sbjct: 38 KVISIHVENFM-FHENFRVEFGPNTNFLVGKNGSGKSATITALTVGLGGTARASSRAASI 96 Query: 88 KKRSIKTPMPMCMAVPRC 105 K K + + C Sbjct: 97 PKLIKKGERAAKIEITLC 114 >gi|27375938|ref|NP_767467.1| recombination protein F [Bradyrhizobium japonicum USDA 110] gi|27349076|dbj|BAC46092.1| DNA replication and repair protein [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + +E A + + G NG GK++ EAI +L G RR + + Sbjct: 5 RIHRLTLTHFRNYRA-AGLETAADMVALVGPNGAGKTNCIEAISFLSPGRGLRRATLEDV 63 Query: 88 KKRSIK 93 Sbjct: 64 ADNQGD 69 >gi|224068135|ref|XP_002188800.1| PREDICTED: RAD50 homolog (S. cerevisiae) [Taeniopygia guttata] Length = 1312 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTG 55 >gi|192288436|ref|YP_001989041.1| recombination protein F [Rhodopseudomonas palustris TIE-1] gi|192282185|gb|ACE98565.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris TIE-1] Length = 379 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + ++HFR + AD + ++ G NG GK++ EAI +L G RR Sbjct: 5 RITRLTLTHFRNYRGASLTTTADQV-VLVGPNGAGKTNCLEAISFLSPGRGLRR 57 >gi|39933083|ref|NP_945359.1| recombination protein F [Rhodopseudomonas palustris CGA009] gi|39652708|emb|CAE25447.1| putative RecF protein [Rhodopseudomonas palustris CGA009] Length = 388 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + ++HFR + AD + ++ G NG GK++ EAI +L G RR Sbjct: 14 RITRLTLTHFRNYRGASLTTTADQV-VLVGPNGAGKTNCLEAISFLSPGRGLRR 66 >gi|88706805|ref|ZP_01104506.1| predicted ATP-dependent endonuclease, OLD family protein [Congregibacter litoralis KT71] gi|88698986|gb|EAQ96104.1| predicted ATP-dependent endonuclease, OLD family protein [Congregibacter litoralis KT71] Length = 617 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKHGD 85 ++ +++I ++R + D LT++ G NG GKS++ +AI F + +R G Sbjct: 1 MRITNLKIKNYRSIESLNTR--LDSLTMLCGPNGSGKSNILKAITLAFSDISLDKRVVGQ 58 Query: 86 SIKKRSIKTPM 96 ++ K+ + Sbjct: 59 FVRDNITKSKL 69 >gi|13474646|ref|NP_106215.1| recombination protein F [Mesorhizobium loti MAFF303099] gi|20978640|sp|Q98BH1|RECF_RHILO RecName: Full=DNA replication and repair protein recF gi|14025401|dbj|BAB52001.1| RecF protein [Mesorhizobium loti MAFF303099] Length = 379 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +++FR + + I+ A + +G NG GK++L EAI L G RR Sbjct: 7 ISKLTLTNFRNYAALA-IDLAPGAVVFSGDNGAGKTNLLEAISLLTPGRGLRR 58 >gi|326331347|ref|ZP_08197637.1| putative nuclease sbcCD subunit C [Nocardioidaceae bacterium Broad-1] gi|325950603|gb|EGD42653.1| putative nuclease sbcCD subunit C [Nocardioidaceae bacterium Broad-1] Length = 443 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG------ 76 +L +E++ F FT ++F L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHHLEVTAFGPFTGTVTVDFDQLSEAGLFLLSGATGAGKTSVLDAVCFALYGDVPGDR 60 Query: 77 YTQRRKHGD 85 +R D Sbjct: 61 SVAKRLRSD 69 >gi|323701144|ref|ZP_08112819.1| ATPase-like protein, involved in DNA repair [Desulfotomaculum nigrificans DSM 574] gi|323533746|gb|EGB23610.1| ATPase-like protein, involved in DNA repair [Desulfotomaculum nigrificans DSM 574] Length = 416 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRKH 83 K+ + + +FR E ++E D + G N GK++L A+EW G+ T R Sbjct: 1 MKIKKLGVQNFRNH-EATELEL-DQVNFFVGHNNAGKTTLLAALEWALTGHCLWTDRAGR 58 Query: 84 GDSIKKRSIKTPMPMCMAV 102 G + + + + V Sbjct: 59 GSAELICRGQKQAAVSLEV 77 >gi|322371770|ref|ZP_08046313.1| chromosome segregation protein [Haladaptatus paucihalophilus DX253] gi|320548655|gb|EFW90326.1| chromosome segregation protein [Haladaptatus paucihalophilus DX253] Length = 888 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K + +S+F+ + E + +T+++G NG GKSSL EA + YG Sbjct: 1 MKFERVRLSNFKCY-EDADLALESGITVIHGLNGSGKSSLLEACFFALYG 49 >gi|237808367|ref|YP_002892807.1| RecF/RecN/SMC N domain-containing protein [Tolumonas auensis DSM 9187] gi|237500628|gb|ACQ93221.1| RecF/RecN/SMC N domain protein [Tolumonas auensis DSM 9187] Length = 650 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +++I FR F + ++ + L ++ G+NG GK+++ AI LF+ R Sbjct: 1 MYLSNLKIQGFRCFDKDFNVQLTNGLNVIVGENGAGKTAIISAIRQLFHDSESGR 55 >gi|325066319|ref|ZP_08124992.1| DNA replication and repair protein RecF [Actinomyces oris K20] Length = 81 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + + + G NG GK++L EAI +L + R + Sbjct: 1 MYVSDLSLDDFRSYRSLV-LSLEPGPSAFVGSNGQGKTNLVEAIVYLATLSSHRIGADTA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + +R+ AV R + Sbjct: 60 LVRRAAPGQTQPAGAVVRAR 79 >gi|303388193|ref|XP_003072331.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] gi|303301470|gb|ADM10971.1| chromosome segregation protein [Encephalitozoon intestinalis ATCC 50506] Length = 1002 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + E + V G NG GKS++ + I + + + Sbjct: 1 MFIKEIVLDGFKCYEEKVVVANLDRSFNAVTGMNGSGKSNVLDGILFALGLEGTKALRAN 60 Query: 86 SIKKRSIKTPMPMCMAVPRC 105 +IK+ ++V C Sbjct: 61 NIKELINSNRKECKVSVVMC 80 >gi|225374810|ref|ZP_03752031.1| hypothetical protein ROSEINA2194_00430 [Roseburia inulinivorans DSM 16841] gi|225213379|gb|EEG95733.1| hypothetical protein ROSEINA2194_00430 [Roseburia inulinivorans DSM 16841] Length = 1082 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 35/51 (68%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 KL +++ ++ F+++ I+F D T+++G+NG GKS+L +AI+++ T Sbjct: 3 KLTRLKLINWHRFSDVT-IDFGDS-TLISGENGAGKSTLLDAIQFVVTCST 51 >gi|193211679|ref|YP_001997632.1| DNA replication and repair protein RecF [Chlorobaculum parvum NCIB 8327] gi|259563359|sp|B3QQY5|RECF_CHLP8 RecName: Full=DNA replication and repair protein recF gi|193085156|gb|ACF10432.1| DNA replication and repair protein RecF [Chlorobaculum parvum NCIB 8327] Length = 368 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWL 73 +L I I++FR +EF +T + G+NG GK+S+ EAI + Sbjct: 1 MRLDSISIANFRNH---TLLEFEPGHSVTNIYGRNGSGKTSILEAIHYC 46 >gi|154483926|ref|ZP_02026374.1| hypothetical protein EUBVEN_01632 [Eubacterium ventriosum ATCC 27560] gi|149735417|gb|EDM51303.1| hypothetical protein EUBVEN_01632 [Eubacterium ventriosum ATCC 27560] Length = 362 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+S+FR + + +E D I+ G+N GK+++ EAI + R + Sbjct: 3 VTKIELSNFRNY-DSLSLELDDKTNILYGKNAQGKTNVLEAIYLCSTTKSHRSSKDAELI 61 Query: 89 K 89 K Sbjct: 62 K 62 >gi|149731053|ref|XP_001488501.1| PREDICTED: similar to Structural maintenance of chromosomes protein 4 (Chromosome-associated polypeptide C) (hCAP-C) (XCAP-C homolog) [Equus caballus] Length = 1252 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 48 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 106 >gi|148550949|ref|YP_001260379.1| hypothetical protein Swit_4996 [Sphingomonas wittichii RW1] gi|148503360|gb|ABQ71612.1| hypothetical protein Swit_4996 [Sphingomonas wittichii RW1] Length = 881 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + IS+FR F + IE +D L I+ N GKS++ EA+ F+ Sbjct: 3 LRIRRLAISNFRKFRDPFAIEGLSDGLNIIIEPNETGKSTVLEALRAAFF 52 >gi|328351620|emb|CCA38019.1| Structural maintenance of chromosomes protein 3 [Pichia pastoris CBS 7435] Length = 1207 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I + + +V G+NG GKS+ AI ++ Sbjct: 1 MHIKRIVIQGFKTYKNTTIIEDISPEYNVVVGRNGSGKSNFFAAIRFVL 49 >gi|300120853|emb|CBK21095.2| unnamed protein product [Blastocystis hominis] Length = 1284 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 12/79 (15%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGY-----------GKSSLSEAIEWLFYG 76 ++ IE F+ + I T + G NG GKS+L +AI ++ Sbjct: 3 RIDRIETEDFKSYRGRHVIGPFKQFTCIIGPNGAGILLVVESHRIGKSNLMDAISFVL-A 61 Query: 77 YTQRRKHGDSIKKRSIKTP 95 + ++++ + Sbjct: 62 IPIKNLRSTNLRELVFRNE 80 >gi|288930799|ref|YP_003434859.1| SMC domain protein [Ferroglobus placidus DSM 10642] gi|288893047|gb|ADC64584.1| SMC domain protein [Ferroglobus placidus DSM 10642] Length = 637 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 6/71 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRK 82 K+ +E+ +FR ++ +EF +T++ G+N GK+S+ AI +F T++ Sbjct: 1 MKIERLEVKNFRSIYDL-SVEFGR-ITVLIGRNSSGKTSILNAIRVIFENLDTISTEKNL 58 Query: 83 HGDSIKKRSIK 93 ++I ++ ++ Sbjct: 59 DVNTITEQGLR 69 >gi|257060802|ref|YP_003138690.1| exonuclease SbcC [Cyanothece sp. PCC 8802] gi|256590968|gb|ACV01855.1| exonuclease SbcC [Cyanothece sp. PCC 8802] Length = 1008 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L++ + +F + + H + G NG GKSSL EAI W+ +G ++ D I Sbjct: 4 LELTLKNFLSYQQATLNFRGLHTACICGANGAGKSSLLEAITWVIWGKSRAASDDDVI 61 >gi|47214763|emb|CAG01298.1| unnamed protein product [Tetraodon nigroviridis] Length = 1156 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 31 DIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 1 QVIIQGFRSYRDQTVVDPFSPKPNVIVGRNGSGKSNFFYAIQFVL 45 >gi|154243961|ref|YP_001414919.1| recombination protein F [Xanthobacter autotrophicus Py2] gi|154158046|gb|ABS65262.1| DNA replication and repair protein RecF [Xanthobacter autotrophicus Py2] Length = 378 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + ++ FR + ++ D ++ G NG GK+++ EA+ +L G RR Sbjct: 6 IRKLTLTAFRSYPS-AQVSVEDGPVVLTGPNGAGKTNILEALSFLSPGRGLRR 57 >gi|328675921|gb|AEB28596.1| DNA recombination and repair protein RecF [Francisella cf. novicida 3523] Length = 349 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +FR +F + + + G+NG GK+S+ E+I +L + + R Sbjct: 1 MYISNLRLQNFRNIPFK-SFDFKNSINFIVGKNGSGKTSILESIYFLSHSRSFRS 54 >gi|168186923|ref|ZP_02621558.1| putative RecF/RecN/SMC N domain [Clostridium botulinum C str. Eklund] gi|169295224|gb|EDS77357.1| putative RecF/RecN/SMC N domain [Clostridium botulinum C str. Eklund] Length = 767 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRRKHGD 85 L + + +F+G ++ I+F+ +T + G+N GK+++ +A WL + +Q R GD Sbjct: 5 IFLKKLALRNFKGIKDLN-IDFSK-VTNIYGENATGKTTIVDAFTWLLFDKDSQDRVAGD 62 Query: 86 SIKKRSIKT 94 IKT Sbjct: 63 KESNFQIKT 71 >gi|41615048|ref|NP_963546.1| hypothetical protein NEQ256 [Nanoarchaeum equitans Kin4-M] gi|49036442|sp|P62135|RAD50_NANEQ RecName: Full=DNA double-strand break repair rad50 ATPase gi|40068772|gb|AAR39107.1| NEQ256 [Nanoarchaeum equitans Kin4-M] Length = 786 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +++ + ++ + +F + ++ G NG GK++L E+I +G GD + Sbjct: 4 VKKVILNNVKTHSKRE-FDFEKGINLILGPNGSGKTTLVESIFLALFG-------GDFAR 55 Query: 89 KRSIKTPMPMCMAV 102 MA+ Sbjct: 56 VIDYFKKGEKTMAI 69 >gi|332283844|ref|YP_004415755.1| ATP-dependent OLD family endonuclease [Pusillimonas sp. T7-7] gi|330427797|gb|AEC19131.1| ATP-dependent OLD family endonuclease [Pusillimonas sp. T7-7] Length = 626 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E + D LT G+N GKSS+ EA+E F + + GD+ Sbjct: 20 MRLESVSIKNFRCYREETTVSMVD-LTTFVGKNDIGKSSILEALEIFFNNEAVKIEQGDA 78 Query: 87 IKKRSI 92 Sbjct: 79 NIYSGS 84 >gi|325300494|ref|YP_004260411.1| SMC domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320047|gb|ADY37938.1| SMC domain protein [Bacteroides salanitronis DSM 18170] Length = 441 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ DI I +FRGFTE I F + +V G N GK++L A++ Sbjct: 1 MRIKDITIRNFRGFTERSFI-FDSRMNVVLGNNTTGKTTLLHAVQIALG 48 >gi|257124818|ref|YP_003162932.1| DNA replication and repair protein RecF [Leptotrichia buccalis C-1013-b] gi|257048757|gb|ACV37941.1| DNA replication and repair protein RecF [Leptotrichia buccalis C-1013-b] Length = 362 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I ++FR + K++F + ++ G+NG GK+SL EA+ +L G + R K Sbjct: 1 MYLDQISFNNFRCLVDG-KLKFDRYFNLIYGKNGQGKTSLIEAVHFLATGKSFRTKKVKE 59 Query: 87 IKK 89 I+K Sbjct: 60 IRK 62 >gi|227496603|ref|ZP_03926881.1| recombination protein F [Actinomyces urogenitalis DSM 15434] gi|226833883|gb|EEH66266.1| recombination protein F [Actinomyces urogenitalis DSM 15434] Length = 409 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ FR + E + +T G NG GK++L EA+ +L + R + Sbjct: 1 MYVSDLSADDFRSY-EHLVLSLEPGVTAFIGSNGQGKTNLVEAVGYLSNLTSHRVGADSA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + +R+ AV R K Sbjct: 60 LIRRAEPGQPQPAGAVLRAK 79 >gi|198432135|ref|XP_002120882.1| PREDICTED: similar to XCAP-C [Ciona intestinalis] Length = 1412 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F T + G NG GKS++ +++ ++F GY + + Sbjct: 73 ITHIVNYNFKSYAGKRVLGPFHKSFTAIIGPNGSGKSNVIDSMLFVF-GYRANKIRSKKL 131 >gi|86605432|ref|YP_474195.1| SbcC family exonuclease [Synechococcus sp. JA-3-3Ab] gi|86553974|gb|ABC98932.1| exonuclease, SbcC family [Synechococcus sp. JA-3-3Ab] Length = 1096 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 + + +F +++ H + G NG GKS+L +A+ W +G ++ D I+K Sbjct: 5 RLTLHNFLCYSQAVLDLRGIHTACICGPNGAGKSALLDALTWGLWGQSRASNDSDLIRKG 64 Query: 91 SIKT 94 + +T Sbjct: 65 ASET 68 >gi|301299441|ref|ZP_07205720.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852977|gb|EFK80582.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 433 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + K+ +EI + + + K EF + LT++ G N GK+S+ +AI W G + Sbjct: 1 MAMKINKLEIENVKR-VKAVKAEFTPNGLTVIGGNNNQGKTSILDAIAWALGGNKYKP-- 57 Query: 84 GDSIKKRSIKTP 95 +++ TP Sbjct: 58 -SQAQRQGSVTP 68 >gi|291559422|emb|CBL38222.1| RecF/RecN/SMC N terminal domain [butyrate-producing bacterium SSC/2] Length = 489 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I +F+ + + + I F + L IV G N GKS++ EAI G Sbjct: 1 MFIDKVKIHNFKCYRDFEII-FDEGLNIVVGDNEAGKSTILEAINLALTG 49 >gi|289678014|ref|ZP_06498904.1| hypothetical protein PsyrpsF_32310 [Pseudomonas syringae pv. syringae FF5] Length = 660 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ I IS FR F + I +D +T + G N GK++L +A+ LF +R Sbjct: 1 MRIESITISGFRCFGPNEISIPISDEVTTIVGPNAAGKTALLQAMSKLFGVTRAQR 56 >gi|320532811|ref|ZP_08033588.1| recombination protein F [Actinomyces sp. oral taxon 171 str. F0337] gi|320134962|gb|EFW27133.1| recombination protein F [Actinomyces sp. oral taxon 171 str. F0337] Length = 349 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + + + G NG GK++L EAI +L + R + Sbjct: 1 MYVSDLSLDDFRSYRSLV-LSLEPGPSAFVGSNGQGKTNLVEAIVYLATLSSHRIGADTA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + +R+ AV R + Sbjct: 60 LVRRTAPGQAQPAGAVVRAR 79 >gi|320334215|ref|YP_004170926.1| SMC domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755504|gb|ADV67261.1| SMC domain protein [Deinococcus maricopensis DSM 21211] Length = 910 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + + F F + ++F+D L + GQ G GKS+L +A+ + YG T R Sbjct: 1 MRPLRLTVQGFMPFRQHADVDFSDMELYAIQGQTGSGKSALLDAMTFALYGSTPR 55 >gi|326772841|ref|ZP_08232125.1| RecF protein [Actinomyces viscosus C505] gi|326637473|gb|EGE38375.1| RecF protein [Actinomyces viscosus C505] Length = 405 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + + + G NG GK++L EAI +L + R + Sbjct: 1 MYVSDLSLDDFRSYRSLV-LSLEPGPSAFVGSNGQGKTNLVEAIVYLATLSSHRIGADTA 59 Query: 87 IKKRSIKTPMPMCMAVPRCK 106 + +R+ AV R + Sbjct: 60 LVRRAAPGQAQPAGAVVRAR 79 >gi|261884331|ref|ZP_06008370.1| chromosome partition protein smc [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 55 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 L +EI + F + ++F +T V G NG KS++ Sbjct: 1 MFLKRLEIVGCKSFVDRIGVDFVPGVTAVVGPNGSSKSNV 40 >gi|149245636|ref|XP_001527295.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449689|gb|EDK43945.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1211 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I+I F+ + + + + H V G+NG GKS+ AI ++ Sbjct: 1 MHIKKIKIQGFKTYKNETIVNQLSPHCNAVVGRNGSGKSNFFAAIRFVL 49 >gi|296328804|ref|ZP_06871318.1| DNA replication and repair protein RecF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154139|gb|EFG94943.1| DNA replication and repair protein RecF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 369 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNISYFNFRNL-ENTSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|224368581|ref|YP_002602744.1| hypothetical protein HRM2_14710 [Desulfobacterium autotrophicum HRM2] gi|223691297|gb|ACN14580.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 547 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + I +F+G ++ I+F +T++ G N GKS++ +A+ + Sbjct: 1 MKLTGMTIENFKGISKPVHIDFKP-VTLLFGPNSAGKSTIVQALHYA 46 >gi|184199649|ref|YP_001853856.1| DNA replication and repair protein RecF [Kocuria rhizophila DC2201] gi|183579879|dbj|BAG28350.1| DNA replication and repair protein RecF [Kocuria rhizophila DC2201] Length = 474 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + + + LT+ G NG GK+++ EA++W + R Sbjct: 1 MFVDHLSLLDFRTYAGLD-LALTPGLTVFVGPNGVGKTNIVEAVDWAATLGSHR 53 >gi|56961786|ref|YP_173508.1| recombination protein F [Bacillus clausii KSM-K16] gi|81679102|sp|Q5WM28|RECF_BACSK RecName: Full=DNA replication and repair protein recF gi|56908020|dbj|BAD62547.1| DNA replication and repair protein RecF [Bacillus clausii KSM-K16] Length = 372 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+S +R ++ + F + + + G+N GK++L EAI + + R + + Sbjct: 3 IHTLELSSYRNYS-KTAVVFGEKINVFVGENAQGKTNLLEAIYVVALAKSHRTQKDKEMI 61 >gi|329942796|ref|ZP_08291575.1| DNA replication and repair RecF family protein [Chlamydophila psittaci Cal10] gi|332287388|ref|YP_004422289.1| recombination protein F [Chlamydophila psittaci 6BC] gi|313847968|emb|CBY16965.1| DNA replication and repair protein [Chlamydophila psittaci RD1] gi|325506793|gb|ADZ18431.1| recombination protein F [Chlamydophila psittaci 6BC] gi|328815056|gb|EGF85045.1| DNA replication and repair RecF family protein [Chlamydophila psittaci Cal10] gi|328914637|gb|AEB55470.1| recF protein [Chlamydophila psittaci 6BC] Length = 368 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + +FR + E + + F+ ++ + G+N GK++L EA+ L G + R H Sbjct: 1 MNILSLRLKNFRNYKEAE-VSFSPNINYIFGENAQGKTNLIEALYVLSLGRSFRTSH 56 >gi|47224584|emb|CAG03568.1| unnamed protein product [Tetraodon nigroviridis] Length = 1088 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + F ++ V G+NG GKS++ + G Q G S+K Sbjct: 6 VKSITLKNFMCHANLGPFAFGSNVNFVVGKNGSGKSAILTGLIVALGGNAQATNRGSSLK 65 >gi|326928755|ref|XP_003210540.1| PREDICTED: DNA repair protein RAD50-like [Meleagris gallopavo] Length = 1312 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTG 55 >gi|28317138|gb|AAD46883.2|AF160943_1 LD20207p [Drosophila melanogaster] Length = 1012 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S R +I K+++ +F+ + ++ F T + G NG GKS++ +++ ++F Sbjct: 79 SMESTGPRLIISKIVN---RNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVF 135 Query: 75 Y--GYTQRRKHGDSIKKRSIKTP 95 R K ++ S P Sbjct: 136 GCRANRIRCKRVSTLIHSSSSYP 158 >gi|310790058|gb|EFQ25591.1| hypothetical protein GLRG_00735 [Glomerella graminicola M1.001] Length = 1307 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 28 KLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + + R F + I F LT++ G NG GK+++ E +++ G G Sbjct: 3 KIDKLSVQGIRSFGGSRETISFYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSKG 60 >gi|119599048|gb|EAW78642.1| SMC4 structural maintenance of chromosomes 4-like 1 (yeast), isoform CRA_c [Homo sapiens] Length = 1289 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|157871564|ref|XP_001684331.1| RAD50 DNA repair-like protein [Leishmania major] gi|68127400|emb|CAJ05024.1| RAD50 DNA repair-like protein [Leishmania major strain Friedlin] Length = 1360 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +++ R F T Q I+F LT++ G+NG GK+++ EA+ Sbjct: 4 IEKLQLCGVRSFDPNPTNQQFIQFQKPLTVILGKNGAGKTTIIEAL 49 >gi|19705418|ref|NP_602913.1| RECF protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713411|gb|AAL94212.1| RECF protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 369 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNISYFNFRNL-ENTSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|300176733|emb|CBK24398.2| unnamed protein product [Blastocystis hominis] Length = 1050 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIE--WLFYGYTQ-RRKHGDSIKKRSIKTPMPM 98 E KI+F +T + G NG GKS++ A++ + + R D + ++ +P + Sbjct: 8 EHLKIDFPQQITFITGPNGGGKSAILTALQVAFCIRANSTGRASRYDQLIRKGSNSPAKI 67 Query: 99 CM 100 C+ Sbjct: 68 CV 69 >gi|294672977|ref|YP_003573593.1| DNA replication and repair protein RecF [Prevotella ruminicola 23] gi|294473002|gb|ADE82391.1| DNA replication and repair protein RecF [Prevotella ruminicola 23] Length = 366 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ E ++F+ + + GQNG GK+++ +AI +L + ++ + Sbjct: 3 LEKLSVINYKNIAEAT-LDFSPKINCLIGQNGVGKTNVLDAIYYLSFCHSANNPIDSQVI 61 Query: 89 KRSIK 93 + + Sbjct: 62 RHGAE 66 >gi|163782787|ref|ZP_02177783.1| hypothetical protein HG1285_15666 [Hydrogenivirga sp. 128-5-R1-1] gi|159881908|gb|EDP75416.1| hypothetical protein HG1285_15666 [Hydrogenivirga sp. 128-5-R1-1] Length = 975 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L +E+ F + + Q I+F+ + I+ G+ G GK+S+ +AI + YG R Sbjct: 1 MRPLKLELEGFTVYKKPQSIDFSRLNFFIIQGKTGAGKTSIVDAITYALYGKVPRYGR 58 >gi|154249194|ref|YP_001410019.1| SMC domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153130|gb|ABS60362.1| SMC domain protein [Fervidobacterium nodosum Rt17-B1] Length = 642 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L I++ +F+ + + + I+F+ ++ + G GKS+L EAI W YG Sbjct: 1 MRLEKIKLYNFKQYRDFE-IDFSKFPQDNKDFHVIVAKMGVGKSNLLEAINWCLYG 55 >gi|332798027|ref|YP_004459526.1| DNA replication and repair protein recF [Tepidanaerobacter sp. Re1] gi|332695762|gb|AEE90219.1| DNA replication and repair protein recF [Tepidanaerobacter sp. Re1] Length = 364 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + FR F E+ +EF + + I G N GK++L EAI ++ R Sbjct: 1 MYLYNLRLYDFRNFLELD-LEFKNGINIFYGDNAQGKTNLLEAIYFITELRATRAFREQE 59 Query: 87 IKKRSIKTPM 96 + + P+ Sbjct: 60 VIR--YDQPL 67 >gi|328790597|ref|XP_396862.4| PREDICTED: structural maintenance of chromosomes protein 4 [Apis mellifera] Length = 1337 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q I F + + G NG GKS++ +++ ++F GY + I Sbjct: 52 ITKIVNQNFKSYGGTQVIGPFHQCFSAIVGPNGSGKSNVIDSMLFVF-GYRASKIRSKKI 110 >gi|149638178|ref|XP_001508900.1| PREDICTED: similar to Rad50 [Ornithorhynchus anatinus] Length = 1355 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + Q I F + LTI+ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGIEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTG 55 >gi|297566294|ref|YP_003685266.1| SMC domain-containing protein [Meiothermus silvanus DSM 9946] gi|296850743|gb|ADH63758.1| SMC domain protein [Meiothermus silvanus DSM 9946] Length = 904 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + + F + E Q+I F + L + G G GKS+L +AI + Y T R Sbjct: 1 MRPLRLRVEGFGAYLEPQEILFDEVELFAITGPTGSGKSTLLDAITYALYKETPR 55 >gi|327401980|ref|YP_004342819.1| SMC domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317488|gb|AEA48104.1| SMC domain protein [Archaeoglobus veneficus SNP6] Length = 885 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + + + +++ I F + + + G+NG GK+++ EAI + + + GD ++ Sbjct: 2 IKEVRLVNVKSYSDSV-IRFTEGVNAIIGENGAGKTTILEAIGFALFDSLPYKI-GDFLR 59 Query: 89 KRSIKTP 95 + + Sbjct: 60 RGEKRGE 66 >gi|325685103|gb|EGD27234.1| recombination protein F [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 381 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR + +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLGRFKQSGFRNLA-LLDLEFDPHVNVFLGENAQGKTNLLEAIYFLALSRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|313122779|ref|YP_004033038.1| DNA replication and repair protein recf [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279342|gb|ADQ60061.1| DNA replication and repair protein recF [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 381 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR + +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLGRFKQSGFRNLA-LLDLEFDPHVNVFLGENAQGKTNLLEAIYFLALSRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|300811994|ref|ZP_07092450.1| DNA replication and repair protein RecF [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497020|gb|EFK32086.1| DNA replication and repair protein RecF [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 381 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S FR + +EF H+ + G+N GK++L EAI +L + R + Sbjct: 1 MYLGRFKQSGFRNLA-LLDLEFDPHVNVFLGENAQGKTNLLEAIYFLALSRSHRTSNDRE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 MIAFGQD 66 >gi|168701985|ref|ZP_02734262.1| exonuclease SbcC [Gemmata obscuriglobus UQM 2246] Length = 1044 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++S F + + Q+I F L +++G NG GKSS+ +A+ + +G Sbjct: 5 RVKLSGFLSYKDEQEIRFDGAPLWMLSGTNGSGKSSIFDAVTFALFG 51 >gi|114590126|ref|XP_001157958.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 12 [Pan troglodytes] gi|114590128|ref|XP_001158014.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 13 [Pan troglodytes] gi|114590130|ref|XP_001158064.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 14 [Pan troglodytes] gi|114590132|ref|XP_001157855.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 10 [Pan troglodytes] gi|114590134|ref|XP_001158124.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 15 [Pan troglodytes] Length = 1288 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|74003564|ref|XP_535848.2| PREDICTED: similar to Structural maintenance of chromosomes 4-like 1 protein (Chromosome-associated polypeptide C) (hCAP-C) (XCAP-C homolog) isoform 1 [Canis familiaris] Length = 1288 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|27376704|ref|NP_768233.1| hypothetical protein bll1593 [Bradyrhizobium japonicum USDA 110] gi|27349845|dbj|BAC46858.1| bll1593 [Bradyrhizobium japonicum USDA 110] Length = 810 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHGD 85 +L +++ FR + +++G NG GK+SL +IE G + R D Sbjct: 4 RLKFLKVEDFRSIRGPAGVSLDAPAVLIHGPNGTGKTSLLSSIELALTGSVPSLARLDRD 63 Query: 86 SIKKRSIK 93 + K Sbjct: 64 YMAYLPHK 71 >gi|109048423|ref|XP_001099428.1| PREDICTED: structural maintenance of chromosomes protein 4-like isoform 14 [Macaca mulatta] gi|297286511|ref|XP_001098806.2| PREDICTED: structural maintenance of chromosomes protein 4-like isoform 8 [Macaca mulatta] Length = 1287 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|332214594|ref|XP_003256420.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 1 [Nomascus leucogenys] gi|332214596|ref|XP_003256421.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 2 [Nomascus leucogenys] Length = 1287 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|254520693|ref|ZP_05132749.1| recombination protein F [Clostridium sp. 7_2_43FAA] gi|226914442|gb|EEH99643.1| recombination protein F [Clostridium sp. 7_2_43FAA] Length = 361 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + + I ++ + G N GK+++ EAI + + + R Sbjct: 1 MYIKRLQMLNYRNYKSLN-ITLGKNVNVFMGDNAQGKTNILEAIYYCAFAKSHRTSKDRE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LINWNSDS 67 >gi|294656912|ref|XP_002770330.1| DEHA2D17314p [Debaryomyces hansenii CBS767] gi|199431834|emb|CAR65684.1| DEHA2D17314p [Debaryomyces hansenii] Length = 1309 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F + I+F LT++ GQNG GK+++ E +++ G Sbjct: 4 LFKLSIQGIRSFDSERHETIQFGFPLTLICGQNGCGKTTIIECLKYATTG 53 >gi|194016619|ref|ZP_03055233.1| DNA replication and repair protein RecF [Bacillus pumilus ATCC 7061] gi|194012092|gb|EDW21660.1| DNA replication and repair protein RecF [Bacillus pumilus ATCC 7061] Length = 370 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ +R + E +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQSLALTSYRNY-EHTELQFDNKVNVMIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRWDQD 66 >gi|167767268|ref|ZP_02439321.1| hypothetical protein CLOSS21_01787 [Clostridium sp. SS2/1] gi|167711243|gb|EDS21822.1| hypothetical protein CLOSS21_01787 [Clostridium sp. SS2/1] Length = 545 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I +F+ + + + I F + L IV G N GKS++ EAI G Sbjct: 1 MFIDKVKIHNFKCYRDFEII-FDEGLNIVVGDNEAGKSTILEAINLALTG 49 >gi|160914816|ref|ZP_02077030.1| hypothetical protein EUBDOL_00823 [Eubacterium dolichum DSM 3991] gi|158433356|gb|EDP11645.1| hypothetical protein EUBDOL_00823 [Eubacterium dolichum DSM 3991] Length = 366 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + +R + ++Q I + + I++G+N GK+++ EAI +L + R + Sbjct: 1 MRLTKLRLHDYRNYEDLQ-ITLKNGIHILSGKNAQGKTNVLEAILYLSTTRSHRTACDED 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 LIKEGKE 66 >gi|157690802|ref|YP_001485264.1| recombination protein F [Bacillus pumilus SAFR-032] gi|166918720|sp|A8F8Y7|RECF_BACP2 RecName: Full=DNA replication and repair protein recF gi|157679560|gb|ABV60704.1| recombination protein F [Bacillus pumilus SAFR-032] Length = 370 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ +R + E +++F + + ++ G+N GK++L EAI L + R + Sbjct: 1 MYIQSLALTSYRNY-EHTELQFDNKVNVMIGENAQGKTNLMEAIYVLSMAKSHRTSNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRWDQD 66 >gi|6807671|emb|CAB66811.1| hypothetical protein [Homo sapiens] Length = 1288 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|51893313|ref|YP_076004.1| DNA repair exonuclease [Symbiobacterium thermophilum IAM 14863] gi|51857002|dbj|BAD41160.1| DNA repair exonuclease [Symbiobacterium thermophilum IAM 14863] Length = 1200 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + + + + E Q+I+F + L + G G GKS++ +AI YG +R Sbjct: 1 MRPIRLAFAGLQSYREPQEIDFRELMGAGLFGIFGPTGAGKSTILDAITLALYGRVER 58 >gi|157278443|ref|NP_001098324.1| meiosis-specific cohesin subunit SMC1 beta [Oryzias latipes] gi|41349746|dbj|BAD08304.1| meiosis-specific cohesin subunit SMC1 beta [Oryzias latipes] Length = 1082 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L ++I +F+ + I + + G NG GKS++ +A+ + Sbjct: 3 YLKQLDIENFKSWRGKHVIGPFMKFSCIIGTNGSGKSNVMDALSFAIGERAA 54 >gi|50658063|ref|NP_001002800.1| structural maintenance of chromosomes protein 4 [Homo sapiens] gi|50658065|ref|NP_005487.3| structural maintenance of chromosomes protein 4 [Homo sapiens] gi|30173386|sp|Q9NTJ3|SMC4_HUMAN RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome-associated polypeptide C; Short=hCAP-C; AltName: Full=XCAP-C homolog gi|4092846|dbj|BAA73535.1| chromosome-associated polypeptide-C [Homo sapiens] gi|119599045|gb|EAW78639.1| SMC4 structural maintenance of chromosomes 4-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|119599046|gb|EAW78640.1| SMC4 structural maintenance of chromosomes 4-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|148922377|gb|AAI46371.1| Structural maintenance of chromosomes 4 [synthetic construct] gi|151556600|gb|AAI48797.1| Structural maintenance of chromosomes 4 [synthetic construct] gi|261857726|dbj|BAI45385.1| structural maintenance of chromosomes 4 [synthetic construct] Length = 1288 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|332214598|ref|XP_003256422.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 3 [Nomascus leucogenys] Length = 1262 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 58 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 116 >gi|331697723|ref|YP_004333962.1| exonuclease SbcC [Pseudonocardia dioxanivorans CB1190] gi|326952412|gb|AEA26109.1| exonuclease SbcC [Pseudonocardia dioxanivorans CB1190] Length = 1107 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +E+ F F E ++F + G G GKS++ +A+ + YG R Sbjct: 1 MRPVRLEMQGFAAFREPAVVDFTGADYFALVGPTGAGKSTVVDAMCFALYGSVPR 55 >gi|312976775|ref|ZP_07788524.1| putative exonuclease [Lactobacillus crispatus CTV-05] gi|310896103|gb|EFQ45168.1| putative exonuclease [Lactobacillus crispatus CTV-05] Length = 307 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 R + +L + I F+ F E KI+F+ T G NG GK++ A+ Sbjct: 2 RGIRLRLKTLLIKGFKSFNEETKIDFSKE-TAFIGTNGSGKTACLLAL 48 >gi|229527632|ref|ZP_04417023.1| exonuclease SbcC [Vibrio cholerae 12129(1)] gi|229333994|gb|EEN99479.1| exonuclease SbcC [Vibrio cholerae 12129(1)] Length = 1013 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F ++I+F L ++NG G GKSS+ +AI + YG T + Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE 60 Query: 83 H-GDSIK 88 GD ++ Sbjct: 61 RTGDQMR 67 >gi|261379433|ref|ZP_05984006.1| putative DNA sulfur modification protein DndD [Neisseria subflava NJ9703] gi|284797883|gb|EFC53230.1| putative DNA sulfur modification protein DndD [Neisseria subflava NJ9703] Length = 683 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I++ +F+ + E + EF +L +V +NG+GK++L EAI Y Sbjct: 1 MYIKRIKLKNFKSYAEAE-FEFPPPEKGRNLILVGAENGHGKTTLLEAIYLCLY 53 >gi|225012738|ref|ZP_03703173.1| DNA replication and repair protein RecF [Flavobacteria bacterium MS024-2A] gi|225003271|gb|EEG41246.1| DNA replication and repair protein RecF [Flavobacteria bacterium MS024-2A] Length = 359 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I +++++ T +F + G NG GK+++ +AI L +G + Sbjct: 1 MHLKQITLTNYKNITSKT-FDFNPKINCFIGNNGVGKTNILDAIYHLAFGKS 51 >gi|225023576|ref|ZP_03712768.1| hypothetical protein EIKCOROL_00435 [Eikenella corrodens ATCC 23834] gi|224943671|gb|EEG24880.1| hypothetical protein EIKCOROL_00435 [Eikenella corrodens ATCC 23834] Length = 683 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I++ +F+ + E + EF +L +V +NG+GK++L EAI Y Sbjct: 1 MYIKRIKLKNFKSYAEAE-FEFPPPEKGRNLILVGAENGHGKTTLLEAIYLCLY 53 >gi|217971219|ref|YP_002355970.1| recombination protein F [Shewanella baltica OS223] gi|304412707|ref|ZP_07394310.1| DNA replication and repair protein RecF [Shewanella baltica OS183] gi|307305828|ref|ZP_07585574.1| DNA replication and repair protein RecF [Shewanella baltica BA175] gi|254790487|sp|B8E3P6|RECF_SHEB2 RecName: Full=DNA replication and repair protein recF gi|217496354|gb|ACK44547.1| DNA replication and repair protein RecF [Shewanella baltica OS223] gi|304348917|gb|EFM13332.1| DNA replication and repair protein RecF [Shewanella baltica OS183] gi|306911321|gb|EFN41747.1| DNA replication and repair protein RecF [Shewanella baltica BA175] Length = 360 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q I A + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLNIEAFRNIQSAQLIP-APGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|152998558|ref|YP_001364239.1| recombination protein F [Shewanella baltica OS185] gi|166221863|sp|A6WH87|RECF_SHEB8 RecName: Full=DNA replication and repair protein recF gi|151363176|gb|ABS06176.1| DNA replication and repair protein RecF [Shewanella baltica OS185] Length = 360 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q I A + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLNIEAFRNIQSAQLIP-APGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|47224982|emb|CAF97397.1| unnamed protein product [Tetraodon nigroviridis] Length = 1305 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 38 ITHLLNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 96 >gi|126172260|ref|YP_001048409.1| recombination protein F [Shewanella baltica OS155] gi|160873129|ref|YP_001552445.1| recombination protein F [Shewanella baltica OS195] gi|166221862|sp|A3CYH7|RECF_SHEB5 RecName: Full=DNA replication and repair protein recF gi|189039641|sp|A9KU74|RECF_SHEB9 RecName: Full=DNA replication and repair protein recF gi|125995465|gb|ABN59540.1| DNA replication and repair protein RecF [Shewanella baltica OS155] gi|160858651|gb|ABX47185.1| DNA replication and repair protein RecF [Shewanella baltica OS195] gi|315265354|gb|ADT92207.1| DNA replication and repair protein RecF [Shewanella baltica OS678] Length = 360 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q I A + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLNIEAFRNIQSAQLIP-APGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|332664566|ref|YP_004447354.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333380|gb|AEE50481.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 398 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F+ IE + + G+NG GKS++ EA+ + G + R +++ Sbjct: 15 LKEITIKNFKSIANDT-IELGR-VNVFIGENGCGKSNILEAVGFASAG-VENRVDNENLI 71 Query: 89 KRSIKTPMP 97 + ++ P Sbjct: 72 SKGVRVAKP 80 >gi|301609958|ref|XP_002934531.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Xenopus (Silurana) tropicalis] Length = 1116 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Query: 8 NTCACLSKSL--TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSS 65 N+ +C S+S+ T + I + I + +F + + F ++ V G NG GKS+ Sbjct: 65 NSVSCDSQSVSCTGTFCTGEIGIIESIFLRNFMCHSMLGPFRFGPNVNFVVGNNGSGKSA 124 Query: 66 LSEAIEWLFYGYTQRRKHGDSIK 88 + A+ G G +IK Sbjct: 125 VLTALIVGLGGKAAVTNRGSTIK 147 >gi|256391659|ref|YP_003113223.1| hypothetical protein Caci_2464 [Catenulispora acidiphila DSM 44928] gi|256357885|gb|ACU71382.1| hypothetical protein Caci_2464 [Catenulispora acidiphila DSM 44928] Length = 1051 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL I +++FRG + + +T+V G N GKSS EA L DS Sbjct: 1 MRLLRIRLTNFRGVADRELTFAEHGVTVVEGPNESGKSSTIEAFGLLLDEL-------DS 53 Query: 87 IKKRSIKTPMP 97 +K +++ P Sbjct: 54 SRKEAVRAVKP 64 >gi|193785579|dbj|BAG54637.1| unnamed protein product [Homo sapiens] Length = 1263 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 59 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 117 >gi|114590136|ref|XP_001157803.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 9 [Pan troglodytes] Length = 1263 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 59 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 117 >gi|56459115|ref|YP_154396.1| recombinational DNA repair ATPase [Idiomarina loihiensis L2TR] gi|81678377|sp|Q5QY37|RECF_IDILO RecName: Full=DNA replication and repair protein recF gi|56178125|gb|AAV80847.1| Recombinational DNA repair ATPase [Idiomarina loihiensis L2TR] Length = 354 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +SHFR F+E+ + + I+ G NG GK+SL EAI L +G + R Sbjct: 1 MFIETLNLSHFRNFSEVALSP-SPKINIITGDNGSGKTSLLEAIYLLGFGRSFR 53 >gi|294628181|ref|ZP_06706741.1| exonuclease [Streptomyces sp. e14] gi|292831514|gb|EFF89863.1| exonuclease [Streptomyces sp. e14] Length = 464 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 11/87 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQ 79 +L +EI+ F F Q ++F A L +++G G GK+S+ +A+ + YG + Sbjct: 1 MRLHRLEITAFGPFGSRQCVDFDALSAAGLFLLHGPTGAGKTSVLDAVCYALYGSVPGAR 60 Query: 80 RRKHGDSIK----KRSIKTPMPMCMAV 102 + G +++ + +T + + + V Sbjct: 61 QSGQGATLRSDHADAATRTEVTLDLTV 87 >gi|239916574|ref|YP_002956132.1| DNA replication and repair protein RecF [Micrococcus luteus NCTC 2665] gi|281414962|ref|ZP_06246704.1| DNA replication and repair protein RecF [Micrococcus luteus NCTC 2665] gi|259563665|sp|C5C7X6|RECF_MICLC RecName: Full=DNA replication and repair protein recF gi|239837781|gb|ACS29578.1| DNA replication and repair protein RecF [Micrococcus luteus NCTC 2665] Length = 404 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + +E T++ G NG GK++L EAI +L + R Sbjct: 1 MYLSHLTVADFRSYR-WADLELTPGSTVLLGANGVGKTNLVEAIGYLGAQQSHRVSSDAQ 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LVRFGRDRAR 69 >gi|171694914|ref|XP_001912381.1| hypothetical protein [Podospora anserina S mat+] gi|170947699|emb|CAP59861.1| unnamed protein product [Podospora anserina S mat+] Length = 1320 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I R F+ E Q I F LT++ G NG GK+++ E +++ G G Sbjct: 3 RIEKLSILGVRSFSPHEQQAIAFNTPLTLIVGYNGSGKTTVIECLKYATTGELPPNSKG 61 >gi|109048435|ref|XP_001098705.1| PREDICTED: structural maintenance of chromosomes protein 4-like isoform 7 [Macaca mulatta] Length = 1262 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 58 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 116 >gi|330872072|gb|EGH06221.1| hypothetical protein Pgy4_00810 [Pseudomonas syringae pv. glycinea str. race 4] Length = 438 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + Sbjct: 18 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCVG 65 >gi|330998406|ref|ZP_08322230.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] gi|329568512|gb|EGG50317.1| putative DNA sulfur modification protein DndD [Paraprevotella xylaniphila YIT 11841] Length = 713 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + ++R + K+ F + ++ ++ G NG+GK++ ++ W YG Sbjct: 1 MFIKSIILHNYRAYRGHNKVSFQPDSKNIFLIAGNNGFGKTTFLTSLVWCLYG 53 >gi|320322043|gb|EFW78139.1| hypothetical protein PsgB076_24659 [Pseudomonas syringae pv. glycinea str. B076] gi|320330851|gb|EFW86825.1| hypothetical protein PsgRace4_05763 [Pseudomonas syringae pv. glycinea str. race 4] Length = 421 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCVG 48 >gi|294781813|ref|ZP_06747146.1| RECF protein [Fusobacterium sp. 1_1_41FAA] gi|294481923|gb|EFG29691.1| RECF protein [Fusobacterium sp. 1_1_41FAA] Length = 369 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E IE +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNISYLNFRNL-ENTSIELSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTTE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|242277528|ref|YP_002989657.1| DNA repair ATPase-like protein [Desulfovibrio salexigens DSM 2638] gi|242120422|gb|ACS78118.1| ATPase involved in DNA repair-like protein [Desulfovibrio salexigens DSM 2638] Length = 446 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F E +IE +T++ G N GKSS+ EA+ + + K Sbjct: 2 IKKILLKNFLAHAE-TEIEPGPGMTVLTGPNNSGKSSIVEALRCIATNPLPKHFIRHGAK 60 Query: 89 KRSIKTPM 96 + ++ M Sbjct: 61 QARVELEM 68 >gi|254462172|ref|ZP_05075588.1| DNA replication and repair protein RecF [Rhodobacterales bacterium HTCC2083] gi|206678761|gb|EDZ43248.1| DNA replication and repair protein RecF [Rhodobacteraceae bacterium HTCC2083] Length = 368 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + ++ +SHFR ++ +I + G NG GK+++ EA+ G RR + Sbjct: 1 MLAITELTLSHFRSH-KLARISCGPLPVAIYGPNGAGKTNILEAVSLFSPGRGMRRASAE 59 Query: 86 SIKKR 90 + +R Sbjct: 60 DMTRR 64 >gi|167516574|ref|XP_001742628.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779252|gb|EDQ92866.1| predicted protein [Monosiga brevicollis MX1] Length = 294 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F+ Q +EF +T+V G+NG GK+++ EA+ ++ G Sbjct: 3 KVNKLLIQGIRSFSPDQHEVLEFFP-ITVVVGENGSGKTTIVEALRFITTG 52 >gi|329663956|ref|NP_001098796.2| structural maintenance of chromosomes protein 4 [Bos taurus] Length = 1288 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|27881854|gb|AAH44377.1| Smc4 protein [Danio rerio] gi|33417184|gb|AAH55496.1| Smc4 protein [Danio rerio] Length = 482 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|71735912|ref|YP_272712.1| hypothetical protein PSPPH_0409 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556465|gb|AAZ35676.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 421 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FR + E +F +V G NG GK+SL + Sbjct: 1 MRLDHLHLQNFRCY-EDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCVG 48 >gi|57238782|ref|YP_179918.1| recombination protein F [Ehrlichia ruminantium str. Welgevonden] gi|58578707|ref|YP_196919.1| recombination protein F [Ehrlichia ruminantium str. Welgevonden] gi|57160861|emb|CAH57763.1| putative DNA replication and repair protein RecF [Ehrlichia ruminantium str. Welgevonden] gi|58417333|emb|CAI26537.1| DNA replication and repair protein recF [Ehrlichia ruminantium str. Welgevonden] Length = 372 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +FR + I+ ++ + ++ G+NG GK+++ EAI L G R + +S+ Sbjct: 8 YIQNLRLINFRNYLNIE-LDTSGKSVVLLGKNGAGKTNILEAISLLSKGTGIRGVNMESM 66 Query: 88 KKRSIKTP 95 + S P Sbjct: 67 QNSSSDLP 74 >gi|332212801|ref|XP_003255507.1| PREDICTED: structural maintenance of chromosomes protein 3 [Nomascus leucogenys] Length = 1250 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 39 VIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 82 >gi|328954594|ref|YP_004371928.1| hypothetical protein Desac_2948 [Desulfobacca acetoxidans DSM 11109] gi|328454918|gb|AEB10747.1| hypothetical protein Desac_2948 [Desulfobacca acetoxidans DSM 11109] Length = 527 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I I ++ + +IE A +T++ G N GKS++ EAI + + Sbjct: 2 IRTIHIQNYMAHQD-TRIELAPGVTVITGPNNVGKSAVVEAIRAAVNNPSPKNV 54 >gi|241202955|ref|YP_002974051.1| hypothetical protein Rleg_0201 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856845|gb|ACS54512.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 442 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + +L + +++FR F +IEF LT++ QNG GK+++ +A Sbjct: 1 MALRLDKLSLTNFRCFA-NCEIEFHSGLTVLVAQNGSGKTAVLDA 44 >gi|163751707|ref|ZP_02158926.1| DNA replication and repair protein RecF [Shewanella benthica KT99] gi|161328446|gb|EDP99602.1| DNA replication and repair protein RecF [Shewanella benthica KT99] Length = 365 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q + + + ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLHIETFRNIASAQLLP-GEGINLIYGLNGSGKTSILEAIYFLGMGRSFRS 54 >gi|326923963|ref|XP_003208202.1| PREDICTED: structural maintenance of chromosomes protein 3-like [Meleagris gallopavo] Length = 1227 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I FR + + ++ F+ ++ G+NG GKS+ AI+++ Sbjct: 30 VIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVL 73 >gi|319897497|ref|YP_004135694.1| DNA replication and repair protein recf [Haemophilus influenzae F3031] gi|317433003|emb|CBY81374.1| DNA replication and repair protein RecF [Haemophilus influenzae F3031] Length = 359 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPGFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|269122839|ref|YP_003305416.1| DNA replication and repair protein RecF [Streptobacillus moniliformis DSM 12112] gi|268314165|gb|ACZ00539.1| DNA replication and repair protein RecF [Streptobacillus moniliformis DSM 12112] Length = 358 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I S FR + +I+ + ++ G+N GK+S EAI + G + R K + + Sbjct: 2 IKEIFFSGFRNLIDK-RIKLSRGFNLIYGENAQGKTSFMEAIYFGATGRSFRTKKNNEMI 60 Query: 89 K 89 K Sbjct: 61 K 61 >gi|52424542|ref|YP_087679.1| recombination protein F [Mannheimia succiniciproducens MBEL55E] gi|81691468|sp|Q65VB6|RECF_MANSM RecName: Full=DNA replication and repair protein recF gi|52306594|gb|AAU37094.1| RecF protein [Mannheimia succiniciproducens MBEL55E] Length = 360 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + +FR + +EF + G NG GK+SL EA+ +L +G + + Sbjct: 1 MAIARLIVENFRNISA-VDLEFDHGFNFLVGNNGSGKTSLLEALFYLGHGRSFKS 54 >gi|329928691|ref|ZP_08282542.1| hypothetical protein HMPREF9412_3137 [Paenibacillus sp. HGF5] gi|328937587|gb|EGG34003.1| hypothetical protein HMPREF9412_3137 [Paenibacillus sp. HGF5] Length = 684 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL ++I +FR F + + I+ D L + G N GK++ A+ +F ++ R Sbjct: 1 MKLSKVKIKNFRSFGQEEVIQI-DELVALIGSNSCGKTTFLNAMLKIFGETSKER 54 >gi|304409758|ref|ZP_07391378.1| SMC domain protein [Shewanella baltica OS183] gi|307304114|ref|ZP_07583867.1| SMC domain protein [Shewanella baltica BA175] gi|304352276|gb|EFM16674.1| SMC domain protein [Shewanella baltica OS183] gi|306913012|gb|EFN43435.1| SMC domain protein [Shewanella baltica BA175] Length = 1018 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q ++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQALDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|304315541|ref|YP_003850686.1| DNA replication and repair protein RecF [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777043|gb|ADL67602.1| DNA replication and repair protein RecF [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 362 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ I +F+ QK+ F+ ++ G N GKS+L E I L G + R Sbjct: 1 MYLKELTIDNFKNLR-QQKVTFSAGTNVIYGTNAQGKSNLLECIRILSIGKSFRNSKNKD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 MVNFNSD 66 >gi|268593490|ref|ZP_06127711.1| DNA replication and repair protein RecF [Providencia rettgeri DSM 1131] gi|291310912|gb|EFE51365.1| DNA replication and repair protein RecF [Providencia rettgeri DSM 1131] Length = 364 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR E + A+ + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRDFRNI-ENADLSLANGFNFLIGPNGSGKTSILEAIYTLGHGRAFRSIQANRVI 61 Query: 89 KRSIKT 94 + + Sbjct: 62 RHEQEQ 67 >gi|217973865|ref|YP_002358616.1| SMC domain-containing protein [Shewanella baltica OS223] gi|217499000|gb|ACK47193.1| SMC domain protein [Shewanella baltica OS223] Length = 1018 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q ++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQALDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|160874794|ref|YP_001554110.1| SMC domain-containing protein [Shewanella baltica OS195] gi|160860316|gb|ABX48850.1| SMC domain protein [Shewanella baltica OS195] gi|315267032|gb|ADT93885.1| SMC domain protein [Shewanella baltica OS678] Length = 1018 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F F Q ++F + L ++NG G GK++L + I + YG T + Sbjct: 1 MRPLSLSMSAFGPFASTQALDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE 60 Query: 83 HGDSIKKR 90 S + Sbjct: 61 REGSQMRC 68 >gi|238504128|ref|XP_002383296.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357] gi|83764631|dbj|BAE54775.1| unnamed protein product [Aspergillus oryzae] gi|220690767|gb|EED47116.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357] Length = 1326 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 25 LIFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 8 ILAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 61 >gi|294637629|ref|ZP_06715908.1| DNA repair protein RecN [Edwardsiella tarda ATCC 23685] gi|291089184|gb|EFE21745.1| DNA repair protein RecN [Edwardsiella tarda ATCC 23685] Length = 553 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G ++ ++ Sbjct: 2 LTQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMP 60 Query: 89 KRSI 92 + I Sbjct: 61 RADI 64 >gi|119500032|ref|XP_001266773.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181] gi|119414938|gb|EAW24876.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181] Length = 1306 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 6 VAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 58 >gi|328711900|ref|XP_001952378.2| PREDICTED: structural maintenance of chromosomes protein 3-like [Acyrthosiphon pisum] Length = 1206 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MHIKQVIIHGFKSYREQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|291513683|emb|CBK62893.1| hypothetical protein AL1_01800 [Alistipes shahii WAL 8301] Length = 679 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ + +F+G ++ ++F + +T + G N GKS++ +A W+ +G Sbjct: 5 VTLKELTLKNFKGIRDLA-VKFGE-VTTIAGANATGKSTVFDAFTWVLFG 52 >gi|281341326|gb|EFB16910.1| hypothetical protein PANDA_020979 [Ailuropoda melanoleuca] Length = 1267 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|255527583|ref|ZP_05394447.1| DNA replication and repair protein RecF [Clostridium carboxidivorans P7] gi|296186781|ref|ZP_06855182.1| DNA replication and repair protein RecF [Clostridium carboxidivorans P7] gi|255508716|gb|EET85092.1| DNA replication and repair protein RecF [Clostridium carboxidivorans P7] gi|296048495|gb|EFG87928.1| DNA replication and repair protein RecF [Clostridium carboxidivorans P7] Length = 363 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ IE ++ + G N GK+++ E+I + G + R Sbjct: 1 MYIKYLQLINFRNYKELN-IELNKNINVFIGNNAQGKTNILESIYYCSIGKSPRTNKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|239932609|ref|ZP_04689562.1| exonuclease [Streptomyces ghanaensis ATCC 14672] Length = 263 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L ++I+ F F ++Q ++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLDITAFGPFGDLQCVDFDELSAAGLFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|147676338|ref|YP_001210553.1| recombination protein F [Pelotomaculum thermopropionicum SI] gi|189039631|sp|A5D6E6|RECF_PELTS RecName: Full=DNA replication and repair protein recF gi|146272435|dbj|BAF58184.1| recombinational DNA repair ATPase [Pelotomaculum thermopropionicum SI] Length = 364 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ +FR F Q +E + +++G+N GK+++ E+I G + R Sbjct: 1 MLLRRLEMLNFRNFA-RQAVEPGLYFNVLSGRNAQGKTNILESIYLACTGRSFRTAREKE 59 Query: 87 IKKRSIK 93 + KR + Sbjct: 60 LIKREKE 66 >gi|20198135|gb|AAM15423.1| putative chromosome associated protein [Arabidopsis thaliana] Length = 1175 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 18 VIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 61 >gi|85691109|ref|XP_965954.1| chromosome segregation protein [Encephalitozoon cuniculi GB-M1] gi|19068521|emb|CAD24989.1| CHROMOSOME SEGREGATION PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 1002 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + E + + G NG GKS++ + I + + + + Sbjct: 1 MFIREIVLDGFKCYEEKVVVANLDRSFNAITGMNGSGKSNVLDGILFALGLESTKALRAN 60 Query: 86 SIKKRSIKTPMPMCMAVPRC 105 + ++ ++V C Sbjct: 61 NTRELINAHRKECRVSVVMC 80 >gi|320547699|ref|ZP_08041984.1| recombination protein F [Streptococcus equinus ATCC 9812] gi|320447774|gb|EFW88532.1| recombination protein F [Streptococcus equinus ATCC 9812] Length = 364 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + ++R + + +EF+ L + G+N GK++ EAI +L + R + Sbjct: 1 MWIQKIALKNYRNYLNNE-LEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRLDKE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIHFQEK 66 >gi|307265766|ref|ZP_07547317.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919161|gb|EFN49384.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 122 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I+I++FR +I F + LT++ G+N GK+SL +AI+ Sbjct: 2 LKRIKINNFRCLQNNLEIIFEEDLTVIVGENDSGKTSLVDAIKVAL 47 >gi|296412283|ref|XP_002835854.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629650|emb|CAZ80011.1| unnamed protein product [Tuber melanosporum] Length = 1345 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 11/77 (14%) Query: 11 ACLSKSLTSYYARKL---------IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQN 59 AC+ +S + R L + ++ + I R F T + I+F LT++ G N Sbjct: 17 ACIKQSTRANILRTLFPRVHFPQPLSRIDKLAILGVRSFDNTRSETIQFHAPLTLIVGYN 76 Query: 60 GYGKSSLSEAIEWLFYG 76 G GK+++ E +++ G Sbjct: 77 GSGKTTIIECLKYATTG 93 >gi|291561909|emb|CBL40714.1| hypothetical protein CK3_09580 [butyrate-producing bacterium SS3/4] Length = 611 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +LL++ I F F + I F D + I+ G+N GKS+L I + +G + R Sbjct: 1 MRLLELHIDGFGKFHDRT-ISFNDGINIIYGKNEAGKSTLHTFIRGMLFGIERGRGR 56 >gi|256846676|ref|ZP_05552132.1| DNA replication and repair protein recF [Fusobacterium sp. 3_1_36A2] gi|294784383|ref|ZP_06749674.1| RECF protein [Fusobacterium sp. 3_1_27] gi|256717896|gb|EEU31453.1| DNA replication and repair protein recF [Fusobacterium sp. 3_1_36A2] gi|294487955|gb|EFG35310.1| RECF protein [Fusobacterium sp. 3_1_27] Length = 369 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENNSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 MIKYNFE 66 >gi|237741010|ref|ZP_04571491.1| DNA replication and repair protein recF [Fusobacterium sp. 4_1_13] gi|229431054|gb|EEO41266.1| DNA replication and repair protein recF [Fusobacterium sp. 4_1_13] Length = 369 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENNSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 MIKYNFE 66 >gi|294659255|ref|XP_461610.2| DEHA2G01606p [Debaryomyces hansenii CBS767] gi|199433822|emb|CAG90057.2| DEHA2G01606p [Debaryomyces hansenii] Length = 1213 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + I+ + +V G+NG GKS+ AI ++ Sbjct: 1 MHIKRIIIQGFKTYKNTTVIDLVSPQHNVVVGRNGSGKSNFFAAIRFVL 49 >gi|34763294|ref|ZP_00144252.1| DNA replication and repair protein recF [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887042|gb|EAA24155.1| DNA replication and repair protein recF [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 369 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENNSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 MIKYNFE 66 >gi|194041163|ref|XP_001927540.1| PREDICTED: structural maintenance of chromosomes protein 4 [Sus scrofa] Length = 1288 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|149241853|ref|XP_001526369.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450492|gb|EDK44748.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1311 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + R F I+F LT++ GQNG GK+++ E + + G G Sbjct: 4 IYKLSLKGIRAFEPEHDETIQFGFPLTLICGQNGCGKTTIIECLRYATTGNLPPNSKG 61 >gi|205371909|ref|ZP_03224729.1| recombination protein F [Bacillus coahuilensis m4-4] Length = 372 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + ++R + E + +EF + + + GQN GK+++ E+I L + R + Sbjct: 1 MFIQELSVENYRNY-ETESLEFENRVNVFLGQNAQGKTNIMESIYVLAMAKSHRTSNDKD 59 Query: 87 IKKRSIKTPM 96 + + + Sbjct: 60 LIRWDSEYAR 69 >gi|186471653|ref|YP_001862971.1| initiation factor 2 associated domain-containing protein [Burkholderia phymatum STM815] gi|184197962|gb|ACC75925.1| Initiation factor 2 associated domain protein [Burkholderia phymatum STM815] Length = 680 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 LS L + + KL +EI++F+ + ++ +D +TI+ G NG GKSS+ +AI W Sbjct: 104 LSPQLDTKAKKLRWTKLASVEITNFKA-VKNLRVPLSD-VTILVGPNGSGKSSVLQAIHW 161 Query: 73 LFYGYT 78 + Sbjct: 162 ATRAAS 167 >gi|172040967|ref|YP_001800681.1| ABC transport system, ATPase component [Corynebacterium urealyticum DSM 7109] gi|171852271|emb|CAQ05247.1| ABC transport system, ATPase component [Corynebacterium urealyticum DSM 7109] Length = 248 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 E ++EF+ +T+++G+NG GKS+L EA+ + D K+ S T P+ Sbjct: 33 RERGRLEFSSPVTVLSGENGVGKSTLLEALALKLGFGATGGRLDDPFKQASTGTESPL 90 >gi|115530857|emb|CAL49314.1| smc4 structural maintenance of chromosomes 4-like 1 (yeast) [Xenopus (Silurana) tropicalis] Length = 338 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 74 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 132 >gi|301791021|ref|XP_002930509.1| PREDICTED: structural maintenance of chromosomes protein 4-like [Ailuropoda melanoleuca] Length = 1288 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|114590138|ref|XP_001157529.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114590140|ref|XP_001157906.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes] Length = 1230 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|110668025|ref|YP_657836.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] gi|109625772|emb|CAJ52207.1| chromosome segregation protein [Haloquadratum walsbyi DSM 16790] Length = 687 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLF 74 S +K + ++L I+++++R + + KI+ + + ++ GQNG GKS++ A+ F Sbjct: 27 STLQKKRMTEILQIKMNNYRQYEGLNKIDLSTIGNKKINVIEGQNGAGKSNILNAVSLCF 86 Query: 75 YGY-TQRRKHGDSIKKRSIKTPMPMCMAVP 103 Y T + G+ ++ I + + P Sbjct: 87 YNQETHQETTGEELETLPIISESILNELDP 116 >gi|197313737|ref|NP_001032262.2| structural maintenance of chromosomes 4 [Rattus norvegicus] Length = 1286 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|89893498|ref|YP_516985.1| hypothetical protein DSY0752 [Desulfitobacterium hafniense Y51] gi|89332946|dbj|BAE82541.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 1165 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + ++I F + Q+I+F+ L + G G GKS++ + + YG R Sbjct: 1 MRPIKLKIKGLNSFIDTQEIDFSQLTSRGLFGIFGPTGSGKSTILDGMTLALYGAVARG 59 >gi|51244240|ref|YP_064124.1| hypothetical protein DP0388 [Desulfotalea psychrophila LSv54] gi|50875277|emb|CAG35117.1| hypothetical protein DP0388 [Desulfotalea psychrophila LSv54] Length = 450 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ + + ++R FT + I+F + LT++ +NG GKS++ +A+ Sbjct: 15 MKIKRLTLHNYRRFTNFE-IDFDEQLTVLVAKNGEGKSTILDAVATSLG 62 >gi|89101116|ref|ZP_01173952.1| recombination protein F [Bacillus sp. NRRL B-14911] gi|89084171|gb|EAR63336.1| recombination protein F [Bacillus sp. NRRL B-14911] Length = 372 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + E +++F D + ++ GQN GK+++ E+I L + R + Sbjct: 1 MFIEQLLLRNYRNY-ESLEVQFEDKVNVIIGQNAQGKTNVMESIYVLAMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|330919094|ref|XP_003298470.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1] gi|311328291|gb|EFQ93424.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1] Length = 1306 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 28 KLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKH 83 K+ + I R F + I+F LT++ G NG GK+++ E++++ G Q + Sbjct: 3 KIDRMMIQGVRSFGPEKGETIQFTAPLTLIVGWNGSGKTTIIESLKYATTGDLPAQSKTG 62 Query: 84 GDSIKKRSIKTPMPM 98 G I ++ + Sbjct: 63 GAFIHDPKLRNEKEL 77 >gi|238637251|ref|NP_001154855.1| RAD50 homolog [Xenopus laevis] gi|224555762|gb|ACN56470.1| Rad50 [Xenopus laevis] Length = 1312 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTG 55 >gi|147919076|ref|YP_687194.1| DNA repair ATPase (Rad50-like) [uncultured methanogenic archaeon RC-I] gi|110622590|emb|CAJ37868.1| predicted DNA repair ATPase (Rad50-like) [uncultured methanogenic archaeon RC-I] Length = 782 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + + + + E + IE + +T ++G NG GKS++ EAI + + Sbjct: 3 IKRVSLKNIKSYKEAE-IELPEGITGISGLNGSGKSTVLEAIGYALF 48 >gi|58336358|ref|YP_192943.1| recombination protein F [Lactobacillus acidophilus NCFM] gi|227902591|ref|ZP_04020396.1| recombination protein F [Lactobacillus acidophilus ATCC 4796] gi|75507682|sp|Q5FN12|RECF_LACAC RecName: Full=DNA replication and repair protein recF gi|58253675|gb|AAV41912.1| DNA repair and genetic recombination protein [Lactobacillus acidophilus NCFM] gi|227869680|gb|EEJ77101.1| recombination protein F [Lactobacillus acidophilus ATCC 4796] Length = 375 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR + ++F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDHLTVQNFRNL-KKLDVDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTSSDRD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|296227682|ref|XP_002759475.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 1 [Callithrix jacchus] gi|296227684|ref|XP_002759476.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 2 [Callithrix jacchus] Length = 1287 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|114590142|ref|XP_001156946.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 1 [Pan troglodytes] Length = 1068 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|21739524|emb|CAD38803.1| hypothetical protein [Homo sapiens] Length = 1230 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|304319869|ref|YP_003853512.1| recombination protein F [Parvularcula bermudensis HTCC2503] gi|303298772|gb|ADM08371.1| recombination protein F [Parvularcula bermudensis HTCC2503] Length = 375 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + +S FR + + F T G NG GK+++ EA+ + G RR + Sbjct: 7 RVTRLALSSFRSYRSAE-WRFEKRQTAFYGPNGAGKTNILEALSLMGPGRGLRRAALGDL 65 Query: 88 KKRSIK 93 ++ Sbjct: 66 TRQGSD 71 >gi|327438874|dbj|BAK15239.1| predicted ATP-dependent endonuclease of the OLD family [Solibacillus silvestris StLB046] Length = 537 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L ++I +++ F + ++F ++ +I+ G NG GKS+L EAI G Sbjct: 1 MLLKKLKIYNYKKFEDF-SLDFDNNFSIMIGNNGAGKSTLLEAIHLALTGT 50 >gi|302873523|ref|YP_003842156.1| SMC domain-containing protein [Clostridium cellulovorans 743B] gi|307688297|ref|ZP_07630743.1| SMC domain-containing protein [Clostridium cellulovorans 743B] gi|302576380|gb|ADL50392.1| SMC domain protein [Clostridium cellulovorans 743B] Length = 1047 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S F ++ + +I+F ++ +V G G GK+++ +AI + YG T Sbjct: 1 MRPVKLVLSAFGPYSGVTEIDFTLLGDKNIFLVTGPTGSGKTTIFDAICYALYGETSGNM 60 Query: 83 HGDSIKKRSIKTPMP 97 + Sbjct: 61 RSGKELRSDFIDEKE 75 >gi|255720056|ref|XP_002556308.1| KLTH0H09966p [Lachancea thermotolerans] gi|238942274|emb|CAR30446.1| KLTH0H09966p [Lachancea thermotolerans] Length = 1224 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + +E + ++ G NG GKS+ A+ ++ Sbjct: 1 MYIKSVVIQGFKTYKNTTSVEGLSPRFNVIIGGNGSGKSNFFAAVRFVL 49 >gi|114590144|ref|XP_001157759.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 isoform 8 [Pan troglodytes] Length = 1216 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 12 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 70 >gi|327356683|gb|EGE85540.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ATCC 18188] Length = 1485 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 187 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 237 >gi|291400090|ref|XP_002716339.1| PREDICTED: SMC4 structural maintenance of chromosomes 4-like 1 [Oryctolagus cuniculus] Length = 1157 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|291283973|ref|YP_003500791.1| hypothetical protein G2583_3286 [Escherichia coli O55:H7 str. CB9615] gi|290763846|gb|ADD57807.1| Hypothetical purine NTPase [Escherichia coli O55:H7 str. CB9615] Length = 773 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I++F+ F + + +F + L + G NGYGK+S+ +A+E LF G +R Sbjct: 5 KLSKLRINNFKAF-DKVEFDFESSSLLTLEGPNGYGKTSVYDALELLFTGKIKR 57 >gi|212697385|ref|ZP_03305513.1| hypothetical protein ANHYDRO_01955 [Anaerococcus hydrogenalis DSM 7454] gi|212675577|gb|EEB35184.1| hypothetical protein ANHYDRO_01955 [Anaerococcus hydrogenalis DSM 7454] Length = 357 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S FR + Q IEF +++ I G N GK++L E+I +L + + Sbjct: 1 MWIQSLRLSKFRNYLS-QNIEFNENINIFLGDNAQGKTNLLESIYYLANAKSFKSFRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|60392985|sp|P70388|RAD50_MOUSE RecName: Full=DNA repair protein RAD50; Short=mRad50 gi|1575575|gb|AAC52894.1| RAD50 [Mus musculus] Length = 1312 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|88803287|ref|ZP_01118813.1| DNA replication and repair protein RecF, ABC family ATPase [Polaribacter irgensii 23-P] gi|88780853|gb|EAR12032.1| DNA replication and repair protein RecF, ABC family ATPase [Polaribacter irgensii 23-P] Length = 359 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I + +F+ E Q +F + G NG GK+++ +AI +L + + Sbjct: 1 MYLKKISLLNFKNL-EAQSFDFQQKINCFVGNNGVGKTNILDAIYYLSFAKS 51 >gi|325846385|ref|ZP_08169354.1| putative DNA replication and repair protein RecF [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481569|gb|EGC84609.1| putative DNA replication and repair protein RecF [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 357 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +S FR + Q IEF +++ I G N GK++L E+I +L + + Sbjct: 1 MWIQSLRLSKFRNYLS-QNIEFNENINIFLGDNAQGKTNLLESIYYLANAKSFKSFRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|306821199|ref|ZP_07454813.1| possible exonuclease SbcC [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550711|gb|EFM38688.1| possible exonuclease SbcC [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 1157 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +EI F F + Q I+F L + G G GK+++ +AI + Y T R Sbjct: 6 LEIEGFNSFEKKQTIDFEKLTSMGLFGIFGNTGSGKTTILDAIIYALYEKTPR 58 >gi|296227686|ref|XP_002759477.1| PREDICTED: structural maintenance of chromosomes protein 4 isoform 3 [Callithrix jacchus] Length = 1262 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 58 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 116 >gi|297543502|ref|YP_003675804.1| DNA replication and repair protein RecF [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841277|gb|ADH59793.1| DNA replication and repair protein RecF [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 362 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR E Q+IEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-EKQRIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKSTE 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRFG 64 >gi|294887950|ref|XP_002772297.1| retiin, putative [Perkinsus marinus ATCC 50983] gi|239876372|gb|EER04113.1| retiin, putative [Perkinsus marinus ATCC 50983] Length = 1504 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 27/87 (31%) Query: 28 KLLDIEISHFRGFTEIQKIEF--------------------------ADHLTIVNGQNGY 61 + +I I++F+ + + LT V G NG Sbjct: 42 YVTEIRITNFKSYNGEHVVPLTIPTRPMNTQSSSDDRGDEQAEEDRVPLTLTGVIGPNGS 101 Query: 62 GKSSLSEAIEWLFYGYTQRRKHGDSIK 88 GKS+L +A+ + RR D +K Sbjct: 102 GKSNLLDAVCFCLC-VGARRLRNDRLK 127 >gi|239611181|gb|EEQ88168.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ER-3] Length = 1470 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 172 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 222 >gi|20198247|gb|AAD26882.3| putative chromosome associated protein [Arabidopsis thaliana] Length = 896 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + E EF++ + V G NG GKS+ AI ++ Sbjct: 43 VIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVL 86 >gi|74003562|ref|XP_861587.1| PREDICTED: similar to Structural maintenance of chromosomes 4-like 1 protein (Chromosome-associated polypeptide C) (hCAP-C) (XCAP-C homolog) isoform 4 [Canis familiaris] Length = 1216 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 12 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 70 >gi|316931399|ref|YP_004106381.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris DX-1] gi|315599113|gb|ADU41648.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris DX-1] Length = 394 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + AD + ++ G NG GK++ EA+ L G RR + I Sbjct: 20 RITRLTLTHFRNYRSASLTTTADQV-VLVGPNGAGKTNCLEAVSLLSPGRGLRRARLEDI 78 >gi|237741549|ref|ZP_04572030.1| exonuclease SbcC [Fusobacterium sp. 4_1_13] gi|229429197|gb|EEO39409.1| exonuclease SbcC [Fusobacterium sp. 4_1_13] Length = 921 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHS-NTTVEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|217076135|ref|YP_002333851.1| DNA double-strand break repair protein Rad50, putative [Thermosipho africanus TCF52B] gi|217035988|gb|ACJ74510.1| DNA double-strand break repair protein Rad50, putative [Thermosipho africanus TCF52B] Length = 643 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ I++S F+ F + KIEF+ + ++ + G GKS+L E+I W YG Sbjct: 1 MRIESIKLSKFKQFKDF-KIEFSKDNNQDNDFHVIVAKMGVGKSNLLESINWCLYG 55 >gi|150391858|ref|YP_001321907.1| SMC domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149951720|gb|ABR50248.1| SMC domain protein [Alkaliphilus metalliredigens QYMF] Length = 1174 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++I F Q IEF L + G G GKSS+ +AI + YG R Sbjct: 1 MRPSLLKIKGINSFNGEQVIEFNRLVEKGLFGIFGPTGSGKSSILDAITLVLYGNISR 58 >gi|320662227|gb|EFX29624.1| hypothetical protein ECO5905_04197 [Escherichia coli O55:H7 str. USDA 5905] Length = 773 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I++F+ F + + +F + L + G NGYGK+S+ +A+E LF G +R Sbjct: 5 KLSKLRINNFKAF-DKVEFDFESSSLLTLEGPNGYGKTSVYDALELLFTGKIKR 57 >gi|296412047|ref|XP_002835739.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629529|emb|CAZ79896.1| unnamed protein product [Tuber melanosporum] Length = 1122 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +F ++ I+F + V G NG GKS++ AI G G S+K Sbjct: 107 IQSVTCQNFMCHRWLE-IKFGPFVNFVIGHNGSGKSAILTAITLCLGGKAAATNRGTSMK 165 >gi|94496772|ref|ZP_01303347.1| hypothetical protein SKA58_16573 [Sphingomonas sp. SKA58] gi|94423785|gb|EAT08811.1| hypothetical protein SKA58_16573 [Sphingomonas sp. SKA58] Length = 673 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQ----KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +I + FR F + +++T+++ +NG GK++L A+ W FYG T + Sbjct: 1 MWLEEITLKDFRCFFGEHVLTLSTDEDENVTLIHAENGVGKTTLLNAMLWCFYGLTTAK 59 >gi|326797730|ref|YP_004315549.1| SMC domain protein [Sphingobacterium sp. 21] gi|326548494|gb|ADZ76879.1| SMC domain protein [Sphingobacterium sp. 21] Length = 551 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ I+I +FR E +F I GQN GK++ EAIE+ F G G Sbjct: 1 MKISRIKIENFRSIKETEFTTTDF----NIFVGQNNCGKTNFFEAIEFFFNGL----GRG 52 Query: 85 DSIKKRSIK 93 +I + K Sbjct: 53 SNINELKYK 61 >gi|319646644|ref|ZP_08000873.1| YirY protein [Bacillus sp. BT1B_CT2] gi|317391232|gb|EFV72030.1| YirY protein [Bacillus sp. BT1B_CT2] Length = 1130 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPISLSIKGLHSFRQEQVIDFERLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|315652274|ref|ZP_07905266.1| exonuclease SbcC [Eubacterium saburreum DSM 3986] gi|315485397|gb|EFU75787.1| exonuclease SbcC [Eubacterium saburreum DSM 3986] Length = 921 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + IS F +++ +F L ++ G G GK+++ +AI + YG Sbjct: 1 MRPVKLTISAFGPYSKETVFDFDKLGTGGLYLITGDTGAGKTTIFDAITYALYGDPSGSN 60 Query: 83 HGDSI---KKRSIKTP 95 S+ K S TP Sbjct: 61 REVSMFRSKYASFDTP 76 >gi|291460939|ref|ZP_06025996.2| exonuclease SBCC [Fusobacterium periodonticum ATCC 33693] gi|291379951|gb|EFE87469.1| exonuclease SBCC [Fusobacterium periodonticum ATCC 33693] Length = 923 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + ++F+ + ++ G+NG GK+S+ EAI + + R Sbjct: 5 IKRVKLENYRSHS-NTTVDFSKGVNLILGKNGKGKTSILEAISSVMFNTKDRSGK 58 >gi|225570328|ref|ZP_03779353.1| hypothetical protein CLOHYLEM_06425 [Clostridium hylemonae DSM 15053] gi|225160860|gb|EEG73479.1| hypothetical protein CLOHYLEM_06425 [Clostridium hylemonae DSM 15053] Length = 361 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +++ FR + + K+EF + I G N GK+++ E++ + R Sbjct: 1 MKIKSLKLKSFRNY-DFLKLEFDNATNIFYGDNAQGKTNILESVYLSGTTKSHRGTKDRD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVQFGKE 66 >gi|282900775|ref|ZP_06308715.1| hypothetical protein CRC_02596 [Cylindrospermopsis raciborskii CS-505] gi|281194305|gb|EFA69262.1| hypothetical protein CRC_02596 [Cylindrospermopsis raciborskii CS-505] Length = 360 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +E+ +F FT+ KI+F+ + ++ G+NG GK+ L +A +L Sbjct: 2 ITHLELKNFMAFTD-VKIDFSPKINVIIGKNGTGKTHLLKAAYFLSG 47 >gi|149052578|gb|EDM04395.1| RAD50 homolog (S. cerevisiae) [Rattus norvegicus] Length = 1312 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|52079567|ref|YP_078358.1| ABC transporter exonuclease SbcC [Bacillus licheniformis ATCC 14580] gi|52784931|ref|YP_090760.1| YirY [Bacillus licheniformis ATCC 14580] gi|52002778|gb|AAU22720.1| ABC transporter, exonuclease SbcC [Bacillus licheniformis ATCC 14580] gi|52347433|gb|AAU40067.1| YirY [Bacillus licheniformis ATCC 14580] Length = 1130 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F + Q I+F + + G G GKSS+ +A+ YG +R Sbjct: 1 MKPISLSIKGLHSFRQEQVIDFERLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA 60 Query: 83 H 83 + Sbjct: 61 N 61 >gi|313835166|gb|EFS72880.1| recombination protein F [Propionibacterium acnes HL037PA2] gi|314929142|gb|EFS92973.1| recombination protein F [Propionibacterium acnes HL044PA1] gi|314970909|gb|EFT15007.1| recombination protein F [Propionibacterium acnes HL037PA3] gi|328905789|gb|EGG25565.1| DNA replication and repair protein RecF [Propionibacterium sp. P08] Length = 394 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR + + T G NG GK++L EA+E+L + R + Sbjct: 1 MFVERLELVDFRSYV-RVDVPMTAGATTFIGSNGQGKTNLVEAVEYLSTLSSHRVNNDTP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRLG 64 >gi|168205257|ref|ZP_02631262.1| putative DNA double-strand break repair Rad50 ATPase [Clostridium perfringens E str. JGS1987] gi|170663130|gb|EDT15813.1| putative DNA double-strand break repair Rad50 ATPase [Clostridium perfringens E str. JGS1987] Length = 658 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I + +F +T +F + +T++ G NG GKS++ E I + G +R Sbjct: 1 MQIKKILLKNFGKYTNK---DFEIEPITLIKGPNGSGKSTVLEGITFALTGSVRR 52 >gi|219666825|ref|YP_002457260.1| SMC domain protein [Desulfitobacterium hafniense DCB-2] gi|219537085|gb|ACL18824.1| SMC domain protein [Desulfitobacterium hafniense DCB-2] Length = 1165 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + ++I F + Q+I+F+ L + G G GKS++ + + YG R Sbjct: 1 MRPIKLKIKGLNSFIDTQEIDFSQLTSRGLFGIFGPTGSGKSTILDGMTLALYGAVARG 59 >gi|153945822|ref|NP_033038.2| DNA repair protein RAD50 [Mus musculus] gi|56206965|emb|CAI24691.1| RAD50 homolog (S. cerevisiae) [Mus musculus] gi|148701627|gb|EDL33574.1| RAD50 homolog (S. cerevisiae) [Mus musculus] gi|195934765|gb|AAI68398.1| RAD50 homolog (S. cerevisiae) [synthetic construct] Length = 1312 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|54038573|gb|AAH84223.1| LOC495064 protein [Xenopus laevis] Length = 724 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTG 55 >gi|299822680|ref|ZP_07054566.1| SbcC exonuclease [Listeria grayi DSM 20601] gi|299816209|gb|EFI83447.1| SbcC exonuclease [Listeria grayi DSM 20601] Length = 1021 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F + + I+F + + I++G+ G GKS++ +AI + +G Sbjct: 1 MKPLKLTMQAFGAYAGKETIDFTELQHEQIFIISGKTGAGKSTIFDAISFAIFGKNNTSD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + + + Sbjct: 61 RDGISMRSHYASADEL 76 >gi|291229744|ref|XP_002734833.1| PREDICTED: DNA repair protein RAD50-like [Saccoglossus kowalevskii] Length = 407 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + Q I+F LT++ GQNG GK+++ E +++ G G Sbjct: 4 VDKLSIQGIRSFGPKEEDKQVIKFFTPLTLIVGQNGAGKTTVIECLKYATTGDMPPGSRG 63 Query: 85 DS 86 S Sbjct: 64 QS 65 >gi|255282366|ref|ZP_05346921.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] gi|255266950|gb|EET60155.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] Length = 618 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-W--LFYGYTQRRKH 83 + I + F+ + + IE ++ G+N GKS++ EA+ W + K Sbjct: 1 MYISKITLKDFKAYADTVIIEVNRQFNVIIGENNIGKSTIFEALFLWKKCYDETLTSNKR 60 Query: 84 G 84 Sbjct: 61 D 61 >gi|183980038|ref|YP_001848329.1| DNA replication and repair protein RecF [Mycobacterium marinum M] gi|226737814|sp|B2HI48|RECF_MYCMM RecName: Full=DNA replication and repair protein recF gi|183173364|gb|ACC38474.1| DNA replication and repair protein RecF [Mycobacterium marinum M] Length = 385 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK+++ EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|118615922|ref|YP_904254.1| recombination protein F [Mycobacterium ulcerans Agy99] gi|166220719|sp|A0PKB4|RECF_MYCUA RecName: Full=DNA replication and repair protein recF gi|118568032|gb|ABL02783.1| DNA replication and repair protein RecF [Mycobacterium ulcerans Agy99] Length = 385 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK+++ EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|327490060|gb|EGF21848.1| chromosome segregation ATPase family protein [Streptococcus sanguinis SK1058] Length = 630 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ ++I +F + +I+ +D L I+ G NG GK++L I + G + R+ + Sbjct: 9 KIKRLKIDNFDLYKCPLEIDLSDKLNIIFGTNGLGKTTLLNIIRYSVIGPYKGRERVRNY 68 Query: 88 KKRSIKTPMPM 98 K K+ PM Sbjct: 69 KD-QQKSRRPM 78 >gi|317126745|ref|YP_004093027.1| DNA replication and repair protein RecF [Bacillus cellulosilyticus DSM 2522] gi|315471693|gb|ADU28296.1| DNA replication and repair protein RecF [Bacillus cellulosilyticus DSM 2522] Length = 373 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I I +R + + + F + + ++ G+N GK++L E+I L + R Sbjct: 1 MYIKQITIRDYRNY-DHLTLPFNNKINVIIGENAQGKTNLMESIYVLAMAKSHRTTKDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|149370654|ref|ZP_01890343.1| DNA replication and repair protein RecF, ABC family ATPase [unidentified eubacterium SCB49] gi|149356205|gb|EDM44762.1| DNA replication and repair protein RecF, ABC family ATPase [unidentified eubacterium SCB49] Length = 359 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E+Q EF ++ G NG GK++ +AI L +G + Sbjct: 3 LNSLSLLNYKNF-EVQTFEFDPNINCFTGHNGVGKTNALDAIYHLSFGKS 51 >gi|332991511|gb|AEF01566.1| Recombinational DNA repair ATPase [Alteromonas sp. SN2] Length = 362 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++++FR + + LTI+ G NG GKSSL E+I +L +G + R S Sbjct: 1 MKLDKVQLTNFRNISSANLSP-SPALTIIRGVNGSGKSSLVESIFYLGFGRSFRTNKHTS 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 VIKTGEE 66 >gi|327261285|ref|XP_003215461.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Anolis carolinensis] Length = 1097 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + EF ++ + G NG GKS++ A+ G G S+K Sbjct: 56 IESIKLKNFMCHSMLGPFEFGSNVNFIVGNNGSGKSAVLTALIVGLGGKAIVTNRGSSVK 115 >gi|289577269|ref|YP_003475896.1| DNA replication and repair protein RecF [Thermoanaerobacter italicus Ab9] gi|289526982|gb|ADD01334.1| DNA replication and repair protein RecF [Thermoanaerobacter italicus Ab9] Length = 362 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR E Q+IEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-EKQRIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKSTE 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRFG 64 >gi|237785885|ref|YP_002906590.1| hypothetical protein ckrop_1302 [Corynebacterium kroppenstedtii DSM 44385] gi|237758797|gb|ACR18047.1| hypothetical protein ckrop_1302 [Corynebacterium kroppenstedtii DSM 44385] Length = 908 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIE 71 ++ ++ I+IS+FR + +EF D +T+++G N GKSS+ +A+ Sbjct: 1 MVMQIHKIDISNFRTI-DHVTLEFPDAGVTVISGPNEVGKSSVVKALT 47 >gi|323493953|ref|ZP_08099070.1| DNA repair exonuclease [Vibrio brasiliensis LMG 20546] gi|323311894|gb|EGA65041.1| DNA repair exonuclease [Vibrio brasiliensis LMG 20546] Length = 1013 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + F F + ++F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPTLLTMQAFGPFATREVVDFTALGNNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKRSI 92 + Sbjct: 61 RQGMQMRCDQ 70 >gi|313205904|ref|YP_004045081.1| DNA replication and repair protein recf [Riemerella anatipestifer DSM 15868] gi|312445220|gb|ADQ81575.1| DNA replication and repair protein RecF [Riemerella anatipestifer DSM 15868] Length = 360 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + +++F+ E +F+ + G NG GK+++ +A+ +L G + Sbjct: 3 IKKLYLTNFKNHQERV-FDFSSEINSFVGNNGVGKTNILDALHYLSVGKS 51 >gi|299069709|emb|CBJ40985.1| hypothethical protein [Ralstonia solanacearum CMR15] Length = 170 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + K+ + I +FR ++ I F D +T G NG GKS+ A++W F G Sbjct: 38 VMKIQSVRIKNFRALKDVT-IPF-DSVTTFIGPNGAGKSTALRALDWYFNG 86 >gi|219113727|ref|XP_002186447.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583297|gb|ACI65917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1099 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I++ +F +++ +EF L +V G NG GKSS+ AI + G + D Sbjct: 23 ITRIKLHNFLTYSD---VEFRPGPRLNMVIGPNGTGKSSILNAICFGLGGEPKLLGRADD 79 Query: 87 IK 88 + Sbjct: 80 AR 81 >gi|13476749|ref|NP_108318.1| overcoming lysogenization defect protein [Mesorhizobium loti MAFF303099] gi|14027510|dbj|BAB53779.1| mlr8165 [Mesorhizobium loti MAFF303099] Length = 608 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I I +FR F + + A++ T + G+N GK++L +A+ Sbjct: 1 MHISKITIRNFRSFAHLD-VRIAENTTCIIGENNTGKTNLLQALRLCLDVNLASSYR 56 >gi|294671384|ref|ZP_06736234.1| hypothetical protein NEIELOOT_03092 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306932|gb|EFE48175.1| hypothetical protein NEIELOOT_03092 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 548 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I++ +F+ + E + EF +L +V +NG+GK++L EAI Y Sbjct: 1 MYIKRIKLKNFKSYAEAE-FEFPPPEKGRNLILVGAENGHGKTTLLEAIYLCLY 53 >gi|172035278|ref|YP_001801779.1| putative exonuclease SbcC [Cyanothece sp. ATCC 51142] gi|171696732|gb|ACB49713.1| putative exonuclease SbcC [Cyanothece sp. ATCC 51142] Length = 1008 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 4 LQLTLKNFLSYRE-TVLDFRGLHTACICGANGAGKSSLLEAITWAIWGKSRTASDEDII 61 >gi|167516528|ref|XP_001742605.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779229|gb|EDQ92843.1| predicted protein [Monosiga brevicollis MX1] Length = 1055 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++++ F ++F +L + G+NG GKS++ +I G G + Sbjct: 65 ITKLDLTDFMNHR-RLTLDFGPNLNFICGENGSGKSAILTSIILGLGGNVGATGRGSTSA 123 Query: 89 KRSIKTPMPMCMAVPR 104 I+ + A+ R Sbjct: 124 SAFIRRDKDVKSAIVR 139 >gi|29789347|ref|NP_598547.1| structural maintenance of chromosomes protein 4 [Mus musculus] gi|30173242|sp|Q8CG47|SMC4_MOUSE RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome-associated polypeptide C; AltName: Full=XCAP-C homolog gi|26986200|emb|CAD59183.1| SMC4 protein [Mus musculus] gi|38566274|gb|AAH62939.1| Structural maintenance of chromosomes 4 [Mus musculus] Length = 1286 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|300769156|ref|ZP_07079044.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493185|gb|EFK28365.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 827 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ ++ +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 1 MMMQIKRLEIAGFGKF-QQQQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 56 >gi|269954814|ref|YP_003324603.1| DNA replication and repair protein RecF [Xylanimonas cellulosilytica DSM 15894] gi|269303495|gb|ACZ29045.1| DNA replication and repair protein RecF [Xylanimonas cellulosilytica DSM 15894] Length = 485 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E G+NG GK++L EAI ++ + R + Sbjct: 1 MYVSHLSLLDFRSYAS-VDVELEPGPNAFVGRNGQGKTNLVEAIGYVATLGSHRVSNDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|301165454|emb|CBW25025.1| putative DNA repair protein [Bacteriovorax marinus SJ] Length = 536 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +K L + +++F F Q+I F D ++ G+ G GKS + +A++ +F ++ Sbjct: 2 KKDKLNLKSLTLNNFATFV-NQEINFTDGFNVIVGETGSGKSLILDALQLVFGNRADKKI 60 >gi|302843706|ref|XP_002953394.1| structural maintenance of chromosomes protein 6 [Volvox carteri f. nagariensis] gi|300261153|gb|EFJ45367.1| structural maintenance of chromosomes protein 6 [Volvox carteri f. nagariensis] Length = 1276 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 17 LTSYYARK--LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L+ + AR L ++ I + +F + +EF H+T+V+GQNG GKS++ +A++ Sbjct: 160 LSGFTARAVGLAGQIAKIRVENFMCHKHFE-MEFGPHVTLVSGQNGSGKSAVVQALQVCL 218 Query: 75 YGYTQRRKHGDSI 87 + G +I Sbjct: 219 GVSARNTGRGTAI 231 >gi|253577470|ref|ZP_04854785.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843170|gb|EES71203.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 699 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++I +FR F + F + + + G NG GK++ AI + R Sbjct: 1 MHISSLKIRNFRNF-QKANFVFKEGVNTIIGANGSGKTNALFAIRLIIDDSLPRS 54 >gi|34849666|gb|AAH58180.1| Rad50 protein [Mus musculus] Length = 661 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|12620631|gb|AAG60907.1|AF322013_26 ID485 [Bradyrhizobium japonicum] Length = 826 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + +S FR + + + +F+ + NG GKSS+ +A+E++F ++ Sbjct: 7 LQSLGLSGFRAYLQPKTFDFSKKRCLAIFAPNGSGKSSVIDALEFMFS-------KDGTL 59 Query: 88 KKRSIKT 94 ++ +T Sbjct: 60 ERLGQRT 66 >gi|79152363|gb|AAI07945.1| Smc4 protein [Rattus norvegicus] Length = 434 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|18313233|ref|NP_559900.1| hypothetical protein PAE2280 [Pyrobaculum aerophilum str. IM2] gi|18160751|gb|AAL64082.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 794 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++++ IE+ +FR + + D + I++G+ G GK+SL A+E+ YG Sbjct: 1 MWRIERIEVENFRSYRGRHIVALGD-VNILHGRIGAGKTSLLYAVEYALYG 50 >gi|27377041|ref|NP_768570.1| hypothetical protein bll1930 [Bradyrhizobium japonicum USDA 110] gi|27350183|dbj|BAC47195.1| bll1930 [Bradyrhizobium japonicum USDA 110] Length = 836 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + +S FR + + + +F+ + NG GKSS+ +A+E++F ++ Sbjct: 17 LQSLGLSGFRAYLQPKTFDFSKKRCLAIFAPNGSGKSSVIDALEFMFS-------KDGTL 69 Query: 88 KKRSIKT 94 ++ +T Sbjct: 70 ERLGQRT 76 >gi|260579026|ref|ZP_05846928.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602891|gb|EEW16166.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 549 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K F + + I +F+G + + F+ ++ G NG GKS+L EAI G Sbjct: 3 KATFMISKVRIRNFKGL-QNYEATFSPQYNVIVGANGAGKSTLLEAIGLAIGG 54 >gi|257462456|ref|ZP_05626868.1| RECF protein [Fusobacterium sp. D12] gi|317060113|ref|ZP_07924598.1| DNA replication and repair protein recF [Fusobacterium sp. D12] gi|313685789|gb|EFS22624.1| DNA replication and repair protein recF [Fusobacterium sp. D12] Length = 248 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L I+ +H R + QKI F + + G+NG GK+S+ EAI + G + R +H Sbjct: 1 MRVLSIQCNHIRNL-KNQKISFCAPIQVFYGKNGQGKTSILEAIYFAGTGLSFRTRHTSE 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 MITYTEDT 67 >gi|242372599|ref|ZP_04818173.1| recombination protein F [Staphylococcus epidermidis M23864:W1] gi|242349654|gb|EES41255.1| recombination protein F [Staphylococcus epidermidis M23864:W1] Length = 371 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EEVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNSDYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|303290725|ref|XP_003064649.1| condensin complex component [Micromonas pusilla CCMP1545] gi|226453675|gb|EEH50983.1| condensin complex component [Micromonas pusilla CCMP1545] Length = 1026 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + ++ I F+ + + + F + G NG GKS++ ++I ++ Sbjct: 1 MFVEEVCIDGFKSYAQRTVVPAFDPLFNAITGLNGSGKSNILDSICFVLG 50 >gi|15806109|ref|NP_294813.1| recombination protein F [Deinococcus radiodurans R1] gi|13959503|sp|Q9RVE0|RECF_DEIRA RecName: Full=DNA replication and repair protein recF gi|126031361|pdb|2O5V|A Chain A, Recombination Mediator Recf gi|6458823|gb|AAF10663.1|AE001959_3 recF protein [Deinococcus radiodurans R1] Length = 359 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + ++R + F + +T + G+NG GK++L EA G T Sbjct: 4 VRLSALSTLNYRNLA-PGTLNFPEGVTGIYGENGAGKTNLLEAAYLALTGQT 54 >gi|304439075|ref|ZP_07398994.1| recombination protein F [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372434|gb|EFM26021.1| recombination protein F [Peptoniphilus duerdenii ATCC BAA-1640] Length = 361 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ +FR + +++ I ++ L + G+N GK++L E+I G + R Sbjct: 1 MKLKSLQLINFRNYEDLKLIP-SETLNLFVGKNAQGKTNLIESIAVSISGSSFRTSKNAE 59 Query: 87 IKKRSIKT 94 + + K+ Sbjct: 60 MIELGNKS 67 >gi|257084618|ref|ZP_05578979.1| predicted protein [Enterococcus faecalis Fly1] gi|256992648|gb|EEU79950.1| predicted protein [Enterococcus faecalis Fly1] Length = 755 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 27 FKLLDIEISHFRG--FTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGY 77 FK+ ++EIS+ R + + E + +TI++G NGYGK++ +AIE L G Sbjct: 6 FKINNVEISNLRNIPYDKPLTFELSKQMITILDGPNGYGKTTFFDAIELLITGN 59 >gi|188592043|ref|YP_001796641.1| exonuclease sbcc [Cupriavidus taiwanensis LMG 19424] gi|170938417|emb|CAP63404.1| Exonuclease SbcC [Cupriavidus taiwanensis LMG 19424] Length = 1020 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F + I+F +++G G GK++L +AI + YG T + Sbjct: 1 MRPLHLTLQAFGPFAATEAIDFTRLGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSGGE 60 Query: 83 HGDSIKKRS 91 + + Sbjct: 61 RSAQAMRSA 69 >gi|124804391|ref|XP_001347988.1| structural maintenance of chromosome protein, putative [Plasmodium falciparum 3D7] gi|23496242|gb|AAN35901.1|AE014840_49 structural maintenance of chromosome protein, putative [Plasmodium falciparum 3D7] Length = 1818 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 1/82 (1%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 S Y + + I +S+F+ + + I T + G NG GKS++ + I + Sbjct: 278 SSVGLYKENDLCFIKYIIVSNFKSYEDENIIGPFSKFTSIIGPNGSGKSNIMDCICFAL- 336 Query: 76 GYTQRRKHGDSIKKRSIKTPMP 97 G + +++ Sbjct: 337 GINNKYLRVKNLRNLIYHKENE 358 >gi|325663386|ref|ZP_08151836.1| hypothetical protein HMPREF0490_02577 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086960|ref|ZP_08336036.1| hypothetical protein HMPREF0987_02339 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470840|gb|EGC74070.1| hypothetical protein HMPREF0490_02577 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409621|gb|EGG89060.1| hypothetical protein HMPREF0987_02339 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 361 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + + IEF I G N GK+++ EA+ + R Sbjct: 1 MVIKSLKLKNFRNY-DFLSIEFDHATNIFYGDNAQGKTNILEAVYLTGTTKSHRGTKDRD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIQFGNE 66 >gi|302540427|ref|ZP_07292769.1| putative nuclease sbcCD subunit C [Streptomyces hygroscopicus ATCC 53653] gi|302458045|gb|EFL21138.1| putative nuclease sbcCD subunit C [Streptomyces himastatinicus ATCC 53653] Length = 431 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + ++ F F Q ++F + L +++G G GK+S+ +A+ + YG + Sbjct: 1 MRLHRLTVTAFGPFGATQHVDFDELSAAGLFLLHGPTGAGKTSVLDAVCYGLYGQVPGAR 60 Query: 83 HGDSIKKRS 91 G + RS Sbjct: 61 QGSGLSLRS 69 >gi|325677646|ref|ZP_08157298.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8] gi|324110614|gb|EGC04778.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8] Length = 927 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F + E I+F L +V G G GK+++ + + + +G Sbjct: 1 MKPLTLTMQAFGPYAEKTTIDFTKLGGQGLYLVTGDTGAGKTTIFDGVCYGLFGRASGFS 60 Query: 83 HGDSIKKRSI 92 + + + Sbjct: 61 RTNDMFRSEY 70 >gi|259910293|ref|YP_002650649.1| recombination protein F [Erwinia pyrifoliae Ep1/96] gi|224965915|emb|CAX57448.1| DNA replication and repair protein RecF [Erwinia pyrifoliae Ep1/96] Length = 361 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ENADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|148745129|gb|AAI42746.1| Smc4 protein [Danio rerio] Length = 481 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|148683552|gb|EDL15499.1| structural maintenance of chromosomes 4 [Mus musculus] Length = 981 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|302337836|ref|YP_003803042.1| SMC domain protein [Spirochaeta smaragdinae DSM 11293] gi|301635021|gb|ADK80448.1| SMC domain protein [Spirochaeta smaragdinae DSM 11293] Length = 1014 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 30 LDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L + + F + E I+F L + GQ G GKSS+ +AI + Y ++R + Sbjct: 4 LQLTLKGFYSYLEETVIDFRPLTAAGLFGIFGQVGSGKSSIVDAIGFALYDQSERLNRQE 63 Query: 86 S 86 Sbjct: 64 K 64 >gi|182417125|ref|ZP_02948500.1| exonuclease SbcC [Clostridium butyricum 5521] gi|237668586|ref|ZP_04528570.1| exonuclease SbcCD, C subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378967|gb|EDT76473.1| exonuclease SbcC [Clostridium butyricum 5521] gi|237656934|gb|EEP54490.1| exonuclease SbcCD, C subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1163 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + ++I F E Q I+F L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLKIKGLNSFQEEQSIDFLKLTDRGLFGIFGPTGSGKSTILDGITLALYGNMARK 59 >gi|91773502|ref|YP_566194.1| ATPase involved in DNA repair-like protein [Methanococcoides burtonii DSM 6242] gi|91712517|gb|ABE52444.1| Chromosome segregation domain protein [Methanococcoides burtonii DSM 6242] Length = 657 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 FKL+ I + +F + ++F ++ + N NG GK++L AI+W FYG + Sbjct: 4 FKLIRITLFNFACYYGENTLDFTTKTDKNIFLFNVPNGSGKTTLFHAIKWGFYGESIEYF 63 Query: 83 HGDS 86 Sbjct: 64 KDSD 67 >gi|10956128|ref|NP_037556.1| hypothetical protein pMD136_p01 [Pediococcus pentosaceus] gi|5091686|gb|AAD39633.1|AF033858_16 unknown [Pediococcus pentosaceus] Length = 607 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ + I +FRG+ + KI D LT + G+N GKS++ +A+E F + Sbjct: 1 MHLVSVTIHNFRGY-KNTKINIDDQLTTLIGKNDVGKSTIVDALEIFFNNTVVK 53 >gi|74184416|dbj|BAE25735.1| unnamed protein product [Mus musculus] Length = 486 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|323339387|ref|ZP_08079671.1| exonuclease [Lactobacillus ruminis ATCC 25644] gi|323093188|gb|EFZ35776.1| exonuclease [Lactobacillus ruminis ATCC 25644] Length = 1034 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 12/86 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 K L +++ +F + E +++F L ++ G G GK+++ +A+ + YG + Sbjct: 1 MKPLKLKMKNFGPY-EDAEVDFTKFSEAPLFLITGATGSGKTTIFDAMCFALYGRSSTDK 59 Query: 82 ------KHGDSIKKRSIKTPMPMCMA 101 D +K KT + + + Sbjct: 60 DRNVFLLRSDFVKDCKEKTEVELTFS 85 >gi|256027569|ref|ZP_05441403.1| RECF protein [Fusobacterium sp. D11] gi|289765528|ref|ZP_06524906.1| DNA replication and repair protein recF [Fusobacterium sp. D11] gi|289717083|gb|EFD81095.1| DNA replication and repair protein recF [Fusobacterium sp. D11] Length = 369 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENSSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|218777973|ref|YP_002429291.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759357|gb|ACL01823.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] Length = 429 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 E +F+GF E +I+ LT++ G NG GKS+L E +E Sbjct: 3 EFHNFKGFKE-ARIDLFKPLTVLIGPNGSGKSNLIEGVE 40 >gi|196228820|ref|ZP_03127686.1| DNA replication and repair protein RecF [Chthoniobacter flavus Ellin428] gi|196227101|gb|EDY21605.1| DNA replication and repair protein RecF [Chthoniobacter flavus Ellin428] Length = 352 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++ HFR F + +++EFA L + G N +GK+SL EA L + R Sbjct: 13 LRGLKVRHFRCF-DAREVEFAPGLNFIVGPNAHGKTSLLEAACILLRLQSPR 63 >gi|159572611|emb|CAP19185.1| RAD50 homolog (S. cerevisiae) [Mus musculus] Length = 657 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|66911163|gb|AAH97553.1| LOC495064 protein [Xenopus laevis] Length = 555 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTG 55 >gi|325088021|gb|EGC41331.1| DNA repair protein RAD50 [Ajellomyces capsulatus H88] Length = 1298 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + + I+F LT++ G NG GK+++ E +++ G Sbjct: 8 KIDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 58 >gi|305681550|ref|ZP_07404356.1| DNA replication and repair protein RecF [Corynebacterium matruchotii ATCC 14266] gi|305658710|gb|EFM48211.1| DNA replication and repair protein RecF [Corynebacterium matruchotii ATCC 14266] Length = 382 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + + +T+ G+NG+GK++L EAI ++ + + R Sbjct: 1 MFIRELSLRDFRSWP-HCHVRLGPGITLFVGRNGHGKTNLVEAIGYVAHLGSHRVAQDAP 59 Query: 87 IKKRSIKTPMPMCMAV 102 + + AV Sbjct: 60 LVRHGQPNARVSATAV 75 >gi|170016362|ref|YP_001727281.1| recombinational DNA repair ATPase (RecF pathway) [Leuconostoc citreum KM20] gi|226737812|sp|B1MW32|RECF_LEUCK RecName: Full=DNA replication and repair protein recF gi|169803219|gb|ACA81837.1| Recombinational DNA repair ATPase (RecF pathway) [Leuconostoc citreum KM20] Length = 378 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++ ++R + ++ ++F+ + + G+N GK++L E+I L + R Sbjct: 1 MELTSLKLVNYRNYANLE-LDFSPGVNVFLGENAQGKTNLLESIYVLALARSHRTSSDKD 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LINWTAK 66 >gi|153815677|ref|ZP_01968345.1| hypothetical protein RUMTOR_01913 [Ruminococcus torques ATCC 27756] gi|145846918|gb|EDK23836.1| hypothetical protein RUMTOR_01913 [Ruminococcus torques ATCC 27756] Length = 238 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + F ++K++F +T G+NG GKS+L EAI + +G+ + + + Sbjct: 22 LKEIEAFNGVEKLDFNKSITFFVGENGSGKSTLLEAIA-IAHGFNPEGGTKNYV-FSTHD 79 Query: 94 TPMPMCMAV 102 T +C A+ Sbjct: 80 THSELCDAI 88 >gi|323140853|ref|ZP_08075766.1| RecF/RecN/SMC N-terminal domain protein [Phascolarctobacterium sp. YIT 12067] gi|322414591|gb|EFY05397.1| RecF/RecN/SMC N-terminal domain protein [Phascolarctobacterium sp. YIT 12067] Length = 438 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + + +FR + + I F LT++ G+NG GK+++ +A+ Sbjct: 1 MQIERLRLKNFRCY-DELDIAFEPKLTVIVGENGKGKTAIFDALAIAL 47 >gi|307353061|ref|YP_003894112.1| SMC domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156294|gb|ADN35674.1| SMC domain protein [Methanoplanus petrolearius DSM 11571] Length = 642 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 27 FKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L +++I++FR + EI ++ LT+ G+N GK+++ +AI + Q Sbjct: 1 MHLSNLKITNFRCYDEIGIDLDIKKGLTVFVGENDSGKTAIIDAIRYAIGTRDQEWNKIK 60 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQ 108 + T + + CK++ Sbjct: 61 DTDFYNEDTSREIKIT---CKFE 80 >gi|328954617|ref|YP_004371950.1| DNA replication and repair protein RecF [Coriobacterium glomerans PW2] gi|328454941|gb|AEB06135.1| DNA replication and repair protein RecF [Coriobacterium glomerans PW2] Length = 375 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + +R F E ++ T+++G+N GK++L EA++ L +G + R+ + + Sbjct: 6 RSLRLRDYRSF-ERFSLDLDPGTTVLSGRNAVGKTNLIEALQLLTFGQSFRKASPSELIR 64 Query: 90 RSIK 93 + Sbjct: 65 DGAE 68 >gi|317123413|ref|YP_004097525.1| exonuclease [Intrasporangium calvum DSM 43043] gi|315587501|gb|ADU46798.1| putative exonuclease [Intrasporangium calvum DSM 43043] Length = 997 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + ++ F + I+F+ L ++ G G GKS++ +AI + YG + Sbjct: 1 MQLHHLRMTAIGPFAGTEVIDFSAVGRAGLFLLEGPTGSGKSTIIDAITFALYGKVAQES 60 Query: 83 HGDSIKKRSIKTPMPM 98 P + Sbjct: 61 ADAERIHSHHADPREI 76 >gi|251777974|ref|ZP_04820894.1| DNA replication and repair protein RecF [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082289|gb|EES48179.1| DNA replication and repair protein RecF [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 361 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I ++++R + ++ + ++ + + G N GK+++ E+I + + + R Sbjct: 1 MYIKAIMLANYRNYNNLE-LNLSEGVNVFIGDNAQGKTNVLESIYYCAFAKSHRTSRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|225714870|gb|ACO13281.1| Structural maintenance of chromosomes protein 4 [Esox lucius] Length = 180 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 89 ITHIVNQNFKSYAGEQILGPFHKRFSRIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 147 >gi|224095847|ref|XP_002187833.1| PREDICTED: structural maintenance of chromosomes 1B [Taeniopygia guttata] Length = 1238 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + F+ + Q I + G NG GKS++ +A+ ++ T Sbjct: 3 YLKVLVVKDFKSWRGQQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCEKTA 54 >gi|149048336|gb|EDM00912.1| rCG63397 [Rattus norvegicus] Length = 946 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|330004289|ref|ZP_08304847.1| putative DNA sulfur modification protein DndD [Klebsiella sp. MS 92-3] gi|328536661|gb|EGF62983.1| putative DNA sulfur modification protein DndD [Klebsiella sp. MS 92-3] Length = 638 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 11/85 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYGY 77 K L++++ +F E + L ++ G NG GKS+L A+ W YG Sbjct: 1 MKFLNLKVENFMVIAEASVDLDSRGLVLIQGINAADSSAASNGAGKSTLMNALMWCLYGE 60 Query: 78 TQRRKHGDSIKKRSIKTPMPMCMAV 102 T GD + + TP ++V Sbjct: 61 TATGYKGDDV--LNSTTPKNCRVSV 83 >gi|291550722|emb|CBL26984.1| Predicted ATPase [Ruminococcus torques L2-14] Length = 238 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L IE F ++K++F +T G+NG GKS+L EA+ + +G+ + I Sbjct: 21 YLKRIE-----AFKGVEKLDFNKAITFFVGENGSGKSTLLEALA-VAHGFNPEGGTKNYI 74 Query: 88 KKRSIKTPMPMCMAV 102 + T +C A+ Sbjct: 75 -FSTHDTHSELCDAI 88 >gi|326317373|ref|YP_004235045.1| SMC domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374209|gb|ADX46478.1| SMC domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1163 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 11/93 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + +I+F L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNLNSLKGEWRIDFTQVPFSDGGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 81 -----RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 + + + + + + + AVP +Y+ Sbjct: 61 IGGVSQGGNELMTRHTAECLAEVEFAVPGGRYR 93 >gi|269967454|ref|ZP_06181511.1| putative nuclease sbcCD subunit C [Vibrio alginolyticus 40B] gi|269827895|gb|EEZ82172.1| putative nuclease sbcCD subunit C [Vibrio alginolyticus 40B] Length = 447 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTEVIDFEKLGRNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 RQGIQMRC 68 >gi|225869472|ref|YP_002745420.1| DNA replication and repair protein RecF [Streptococcus equi subsp. zooepidemicus] gi|259563673|sp|C0MGR5|RECF_STRS7 RecName: Full=DNA replication and repair protein recF gi|225702748|emb|CAX00903.1| DNA replication and repair protein RecF [Streptococcus equi subsp. zooepidemicus] Length = 369 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++H+R + + F+ L + G N GK++ EAI +L + R K Sbjct: 1 MWIKELNLTHYRNY-QQASAAFSPGLNVFIGDNAQGKTNFLEAIYFLSVTRSHRTKSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|225871475|ref|YP_002747422.1| DNA replication and repair protein RecF [Streptococcus equi subsp. equi 4047] gi|254790489|sp|C0MBG1|RECF_STRE4 RecName: Full=DNA replication and repair protein recF gi|225700879|emb|CAW95638.1| DNA replication and repair protein RecF [Streptococcus equi subsp. equi 4047] Length = 369 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++H+R + + F+ L + G N GK++ EAI +L + R K Sbjct: 1 MWIKELNLTHYRNY-QQASAAFSPGLNVFIGDNAQGKTNFLEAIYFLSVTRSHRTKSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|254780766|ref|YP_003065179.1| recombination protein F [Candidatus Liberibacter asiaticus str. psy62] gi|254040443|gb|ACT57239.1| recombination protein F [Candidatus Liberibacter asiaticus str. psy62] Length = 375 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + IS FR + + ++ F TI G NG GK+++ EAI +L G RR Sbjct: 5 IKIKFLNISEFRNYASL-RLVFDAQHTIFVGDNGVGKTNILEAISFLSPGRGFRRASYAD 63 Query: 87 IKKRSI 92 + + Sbjct: 64 VTRIGS 69 >gi|195979034|ref|YP_002124278.1| recombination protein F [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|226737837|sp|B4U113|RECF_STREM RecName: Full=DNA replication and repair protein recF gi|195975739|gb|ACG63265.1| DNA replication and repair protein RecF [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 369 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++H+R + + F+ L + G N GK++ EAI +L + R K Sbjct: 1 MWIKELNLTHYRNY-QQASAAFSPGLNVFIGDNAQGKTNFLEAIYFLSVTRSHRTKSDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|188590699|ref|YP_001919469.1| recombination protein F [Clostridium botulinum E3 str. Alaska E43] gi|226737778|sp|B2UX46|RECF_CLOBA RecName: Full=DNA replication and repair protein recF gi|188500980|gb|ACD54116.1| DNA replication and repair protein RecF [Clostridium botulinum E3 str. Alaska E43] Length = 361 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I ++++R + ++ + ++ + + G N GK+++ E+I + + + R Sbjct: 1 MYIKAIMLANYRNYNNLE-LNLSEGVNVFIGDNAQGKTNVLESIYYCAFAKSHRTSRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|32471197|ref|NP_864190.1| hypothetical protein RB1013 [Rhodopirellula baltica SH 1] gi|32396899|emb|CAD71867.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 1355 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I K+ DI+I F +T + + +T+ G N GK++L + + + YG+T+ R+ Sbjct: 5 IMKIKDIQIDGFGVWTGLSVDSLPEGMTLFYGPNEAGKTTLMQFLRAMLYGFTEERRQK 63 >gi|302874816|ref|YP_003843449.1| DNA repair protein RecN [Clostridium cellulovorans 743B] gi|307690566|ref|ZP_07633012.1| DNA repair protein recN [Clostridium cellulovorans 743B] gi|302577673|gb|ADL51685.1| DNA repair protein RecN [Clostridium cellulovorans 743B] Length = 567 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I++F E I F++ T++ G+ G GKS L +AI ++ R Sbjct: 2 LLQLNINNF-ALIENLTINFSEGFTVLTGETGTGKSILIDAISFVLGAKNNRGV 54 >gi|299133397|ref|ZP_07026592.1| DNA replication and repair protein RecF [Afipia sp. 1NLS2] gi|298593534|gb|EFI53734.1| DNA replication and repair protein RecF [Afipia sp. 1NLS2] Length = 383 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++L + ++ FR + D L ++ G NG GK++ EAI L G RR + I Sbjct: 9 RILRLSLTQFRSYRAASVTTRGD-LVVLVGPNGAGKTNCLEAISLLAPGRGLRRARFEDI 67 Query: 88 KKRSIK 93 R+ Sbjct: 68 ANRAGD 73 >gi|261856129|ref|YP_003263412.1| hypothetical protein Hneap_1535 [Halothiobacillus neapolitanus c2] gi|261836598|gb|ACX96365.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2] Length = 457 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ ++++ F+ F E+QK F +TI+ G N GKS++ A+ + G R Sbjct: 1 MKITELQLEKFKSF-ELQKFNFKK-ITILAGANSAGKSTILNALATILQGSETR 52 >gi|197286952|ref|YP_002152824.1| recombination protein F [Proteus mirabilis HI4320] gi|227354807|ref|ZP_03839224.1| recombination protein F [Proteus mirabilis ATCC 29906] gi|132248|sp|P22839|RECF_PROMI RecName: Full=DNA replication and repair protein recF gi|226737819|sp|B4F0U7|RECF_PROMH RecName: Full=DNA replication and repair protein recF gi|150880|gb|AAA83960.1| putative [Proteus mirabilis] gi|194684439|emb|CAR46163.1| dna replication and repair protein [Proteus mirabilis HI4320] gi|227165125|gb|EEI49956.1| recombination protein F [Proteus mirabilis ATCC 29906] Length = 362 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I HFR E + AD + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRHFRNI-EQADLPLADGFNFLVGPNGSGKTSILEAIYTLGHGRAFRSAQANRVI 61 Query: 89 K 89 + Sbjct: 62 Q 62 >gi|237743162|ref|ZP_04573643.1| DNA replication and repair protein recF [Fusobacterium sp. 7_1] gi|229433458|gb|EEO43670.1| DNA replication and repair protein recF [Fusobacterium sp. 7_1] Length = 369 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENSSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 MIKYNFE 66 >gi|322411789|gb|EFY02697.1| DNA helicase associated protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 689 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + I++FR F E Q IE + T++ G N GK+++ +A+ Sbjct: 1 MKLTKVIINNFRSFGESQIIELNNQ-TVLIGNNSSGKTTVLQAL 43 >gi|325103307|ref|YP_004272961.1| SMC domain protein [Pedobacter saltans DSM 12145] gi|324972155|gb|ADY51139.1| SMC domain protein [Pedobacter saltans DSM 12145] Length = 1023 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 31 DIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + + Q I+F+ L + G G GKSS+ EAI + YG T+R D+ Sbjct: 5 SLTIKGLYSYQKEQTIDFSKLLEGQLFGIFGAVGSGKSSILEAISYALYGDTERLNRTDN 64 >gi|296137633|ref|YP_003644874.1| SMC domain protein [Thiomonas intermedia K12] gi|295797755|gb|ADG32544.1| SMC domain protein [Thiomonas intermedia K12] Length = 884 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY- 75 L S A+ I K++ + ++ G+ + +++F+DHL V G G GKS+L E + + Sbjct: 251 LNSQQAQSPIGKVVRMTVAG--GYLDGVRVDFSDHLNTVIGGRGTGKSTLLECLRFALDL 308 Query: 76 ---GYTQRRKHGDSIKK 89 G ++ H + IK+ Sbjct: 309 PPKGKQAQKLHQEIIKE 325 >gi|194397225|ref|YP_002037963.1| DNA helicase associated protein [Streptococcus pneumoniae G54] gi|307127256|ref|YP_003879287.1| Yga2G [Streptococcus pneumoniae 670-6B] gi|194356892|gb|ACF55340.1| DNA helicase associated protein [Streptococcus pneumoniae G54] gi|306484318|gb|ADM91187.1| Yga2G [Streptococcus pneumoniae 670-6B] gi|319412010|emb|CBY91943.1| DNA helicase associated protein [Streptococcus pneumoniae] Length = 689 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + I++FR F E Q IE + T++ G N GK+++ +A+ Sbjct: 1 MKLTKVIINNFRSFGESQIIELNNQ-TVLIGNNSSGKTTVLQAL 43 >gi|187932670|ref|YP_001884269.1| recombination protein F [Clostridium botulinum B str. Eklund 17B] gi|226737779|sp|B2THB7|RECF_CLOBB RecName: Full=DNA replication and repair protein recF gi|187720823|gb|ACD22044.1| DNA replication and repair protein RecF [Clostridium botulinum B str. Eklund 17B] Length = 361 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I ++++R + ++ + ++ + + G N GK+++ E+I + + + R Sbjct: 1 MYIKAIMLANYRNYNNLE-LNLSEGVNVFIGDNAQGKTNVLESIYYCAFAKSHRTSRDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|116326858|ref|YP_796578.1| recombinational DNA repair ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329805|ref|YP_799523.1| recombinational DNA repair ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282419|sp|Q04WF5|RECF_LEPBJ RecName: Full=DNA replication and repair protein recF gi|122285291|sp|Q056V0|RECF_LEPBL RecName: Full=DNA replication and repair protein recF gi|116119602|gb|ABJ77645.1| Recombinational DNA repair ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123494|gb|ABJ74765.1| Recombinational DNA repair ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 365 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR + E ++F L G NG GK++L EAI L + + R + Sbjct: 1 MFLKHLTLQNFRSY-EELSLDFNSRLIFFVGDNGEGKTNLLEAICMLSWLKSFRESEDSN 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWGSE 66 >gi|74136137|ref|NP_001027927.1| SMC4 protein [Takifugu rubripes] gi|26986436|emb|CAD58915.1| SMC4 protein [Takifugu rubripes] Length = 1326 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F+ + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 80 ITHLVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 138 >gi|260495358|ref|ZP_05815485.1| recombination protein F [Fusobacterium sp. 3_1_33] gi|260197136|gb|EEW94656.1| recombination protein F [Fusobacterium sp. 3_1_33] Length = 369 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E I+ +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNITYLNFRNL-ENSSIDLSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTSE 59 Query: 87 IKKRSIK 93 + K + + Sbjct: 60 MIKYNFE 66 >gi|212542011|ref|XP_002151160.1| DNA repair protein Rad50 [Penicillium marneffei ATCC 18224] gi|210066067|gb|EEA20160.1| DNA repair protein Rad50 [Penicillium marneffei ATCC 18224] Length = 1329 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G G Sbjct: 32 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 90 >gi|306834588|ref|ZP_07467701.1| recombination protein F [Streptococcus bovis ATCC 700338] gi|304423390|gb|EFM26543.1| recombination protein F [Streptococcus bovis ATCC 700338] Length = 364 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + ++R + ++EF+ L + G+N GK++ EAI +L + R + Sbjct: 1 MWIQKITLKNYRNYL-TSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|288906437|ref|YP_003431659.1| recombination protein RecF [Streptococcus gallolyticus UCN34] gi|306832474|ref|ZP_07465626.1| recombination protein F [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979499|ref|YP_004289215.1| DNA replication and repair protein recF [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733163|emb|CBI14744.1| recombination protein RecF [Streptococcus gallolyticus UCN34] gi|304425374|gb|EFM28494.1| recombination protein F [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179427|emb|CBZ49471.1| DNA replication and repair protein recF [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 364 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + ++R + ++EF+ L + G+N GK++ EAI +L + R + Sbjct: 1 MWIQKITLKNYRNYL-TSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|158315570|ref|YP_001508078.1| exonuclease SbcC [Frankia sp. EAN1pec] gi|158110975|gb|ABW13172.1| exonuclease SbcC [Frankia sp. EAN1pec] Length = 1103 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++++ F F E ++ D + G G GKS+L +A+ + +G R Sbjct: 1 MRPVQLDLAGFGSFREPAVLDLTDADYFALVGPTGAGKSTLIDALTFALFGSVPR 55 >gi|74217207|dbj|BAC40608.2| unnamed protein product [Mus musculus] Length = 454 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|251791866|ref|YP_003006586.1| recombination protein F [Aggregatibacter aphrophilus NJ8700] gi|247533253|gb|ACS96499.1| DNA replication and repair protein RecF [Aggregatibacter aphrophilus NJ8700] Length = 358 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR +E+ + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLTVENFRNLQA-VDLEWDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDQP 66 >gi|218459961|ref|ZP_03500052.1| hypothetical protein RetlK5_10859 [Rhizobium etli Kim 5] Length = 158 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +++ ++R F E F + + G+NG GK++L A+ + Sbjct: 1 MHISGVQLVNYRNF-ERANFHFNKGINTIIGENGSGKTNLFRAMRLMLD 48 >gi|166364477|ref|YP_001656750.1| hypothetical protein MAE_17360 [Microcystis aeruginosa NIES-843] gi|166086850|dbj|BAG01558.1| unknown protein [Microcystis aeruginosa NIES-843] Length = 662 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ I+I +F+ F ++ ++ + G N GK++L EAI Sbjct: 1 MKISKIQIKNFKSFQDVT-VDLEPDFNVFTGVNNSGKTNLLEAI 43 >gi|326390361|ref|ZP_08211920.1| DNA replication and repair protein RecF [Thermoanaerobacter ethanolicus JW 200] gi|325993638|gb|EGD52071.1| DNA replication and repair protein RecF [Thermoanaerobacter ethanolicus JW 200] Length = 362 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + QKIEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-QKQKIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKTTE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIKFGED 66 >gi|325577773|ref|ZP_08148048.1| recombination protein F [Haemophilus parainfluenzae ATCC 33392] gi|325160518|gb|EGC72644.1| recombination protein F [Haemophilus parainfluenzae ATCC 33392] Length = 360 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLIVEKFRNLNA-VDLEFDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|326402805|ref|YP_004282886.1| DNA replication and repair protein RecF [Acidiphilium multivorum AIU301] gi|325049666|dbj|BAJ80004.1| DNA replication and repair protein RecF [Acidiphilium multivorum AIU301] Length = 379 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + ++ FR + ++++ + + G NG GK++L EA+ L G R G Sbjct: 14 LRIESLRLTDFRSYA---RLDWQPGGMVVALAGPNGAGKTNLLEAVSLLAPG---RGLRG 67 Query: 85 DSIKKRSIKTP 95 + + + + P Sbjct: 68 ARLAELARRAP 78 >gi|307265435|ref|ZP_07546991.1| DNA replication and repair protein RecF [Thermoanaerobacter wiegelii Rt8.B1] gi|306919549|gb|EFN49767.1| DNA replication and repair protein RecF [Thermoanaerobacter wiegelii Rt8.B1] Length = 362 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + QKIEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-QKQKIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKTTE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIKFGED 66 >gi|301154705|emb|CBW14168.1| gap repair protein [Haemophilus parainfluenzae T3T1] Length = 360 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR +EF + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLIVEKFRNLNA-VDLEFDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVANR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|282895762|ref|ZP_06303849.1| conserved hypothetical protein [Raphidiopsis brookii D9] gi|281199262|gb|EFA74128.1| conserved hypothetical protein [Raphidiopsis brookii D9] Length = 669 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGFTEIQKI------EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I+ +FR F EF + TI++G NG GK+SL W+ Y Sbjct: 1 MKLTSIKFCNFRSFYGQTPEIAIAGGEFQ-NTTIIHGNNGAGKTSLLNGFTWVLYE 55 >gi|227485760|ref|ZP_03916076.1| possible recombination protein F [Anaerococcus lactolyticus ATCC 51172] gi|227236315|gb|EEI86330.1| possible recombination protein F [Anaerococcus lactolyticus ATCC 51172] Length = 367 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + DI++ +FR + + + F + I G N GK++L E+ +L + ++ Sbjct: 1 MWIQDIKLYNFRNYF-YESVNFNESTNIFIGDNAQGKTNLLESCYYLANATSFKKLRDKD 59 Query: 87 IKKRSIK 93 I K + Sbjct: 60 IIKFGQE 66 >gi|198474053|ref|XP_002132615.1| GA25921 [Drosophila pseudoobscura pseudoobscura] gi|198138228|gb|EDY70017.1| GA25921 [Drosophila pseudoobscura pseudoobscura] Length = 979 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY--GYTQRRKHGD 85 + I +F+ + + F T + G NG GKS++ +++ ++F R K Sbjct: 84 IKQIVNHNFKSYAGEVILGPFHHSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVS 143 Query: 86 SIKKRSIKTPMPMCMAV 102 ++ +S + P AV Sbjct: 144 TLIHKSSRYPNLRSCAV 160 >gi|148259598|ref|YP_001233725.1| recombination protein F [Acidiphilium cryptum JF-5] gi|146401279|gb|ABQ29806.1| SMC domain protein [Acidiphilium cryptum JF-5] Length = 379 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + ++ FR + ++++ + + G NG GK++L EA+ L G R G Sbjct: 14 LRIESLRLTDFRSYA---RLDWQPGGMVVALAGPNGAGKTNLLEAVSLLAPG---RGLRG 67 Query: 85 DSIKKRSIKTP 95 + + + + P Sbjct: 68 ARLAELARRAP 78 >gi|170724373|ref|YP_001758399.1| recombination protein F [Shewanella woodyi ATCC 51908] gi|226737835|sp|B1KCX5|RECF_SHEWM RecName: Full=DNA replication and repair protein recF gi|169809720|gb|ACA84304.1| DNA replication and repair protein RecF [Shewanella woodyi ATCC 51908] Length = 365 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR + Q +D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLHIETFRNISSAQLHP-SDGLNLIYGQNGSGKTSVLEAIYFLGMGRSFRS 54 >gi|38181589|gb|AAH61481.1| Smc4 protein [Mus musculus] Length = 1216 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 12 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 70 >gi|301607379|ref|XP_002933283.1| PREDICTED: structural maintenance of chromosomes protein 4 [Xenopus (Silurana) tropicalis] Length = 1286 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 74 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 132 >gi|290558912|gb|EFD92300.1| hypothetical protein BJBARM5_1095 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 326 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L +I + + R + I KI+F++ + I+ G G GKSS+ ++E+ +G K + Sbjct: 3 LSEINLENIRSHS-ITKIKFSEGINIITGNTGSGKSSILMSVEYALFGKIGEGKDEGKM 60 >gi|254430013|ref|ZP_05043720.1| RecF/RecN/SMC N terminal domain, putative [Alcanivorax sp. DG881] gi|196196182|gb|EDX91141.1| RecF/RecN/SMC N terminal domain, putative [Alcanivorax sp. DG881] Length = 369 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++S FR + + ++ + L ++ G NG GK+SL EAI ++ Sbjct: 2 LSRLQLSDFRNYGSAE-VDLSPSLNVILGDNGSGKTSLLEAIYFI 45 >gi|294785833|ref|ZP_06751121.1| exonuclease SBCC [Fusobacterium sp. 3_1_27] gi|294487547|gb|EFG34909.1| exonuclease SBCC [Fusobacterium sp. 3_1_27] Length = 921 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHS-NTTVEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|90421531|ref|YP_529901.1| recombination protein F [Rhodopseudomonas palustris BisB18] gi|90103545|gb|ABD85582.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris BisB18] Length = 379 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + K+ + ++HFR + D + ++ G NG GK++ EAI L G RR D Sbjct: 3 VSKIHRLTLTHFRNYRAASVTVRGD-VVVLVGPNGAGKTNCLEAISLLSPGRGLRRATLD 61 Query: 86 SIKK 89 I Sbjct: 62 DIAD 65 >gi|320582443|gb|EFW96660.1| putative nuclear cohesin complex SMC ATPase [Pichia angusta DL-1] Length = 1518 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 31 DIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 I I F+ + + I+ F+ +V G+NG GKS+ AI ++ Sbjct: 328 KIVIQGFKTYKNMTIIDSFSPKHNVVVGRNGSGKSNFFAAIRFVL 372 >gi|317138239|ref|XP_001816777.2| DNA repair protein Rad50 [Aspergillus oryzae RIB40] Length = 1448 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 133 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 183 >gi|225377806|ref|ZP_03755027.1| hypothetical protein ROSEINA2194_03457 [Roseburia inulinivorans DSM 16841] gi|225210390|gb|EEG92744.1| hypothetical protein ROSEINA2194_03457 [Roseburia inulinivorans DSM 16841] Length = 672 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG--YTQR 80 K I + +F + + IEF ++T+V G N GK+++++A + YG ++ Sbjct: 1 MKFKSITMENFMRYKGVNTIEFSCDPGKNVTVVLGDNTVGKTTIAQAFRFGLYGAVNMEK 60 Query: 81 RKHGDS 86 K+ D Sbjct: 61 WKNADD 66 >gi|225181145|ref|ZP_03734591.1| DNA replication and repair protein RecF [Dethiobacter alkaliphilus AHT 1] gi|225168114|gb|EEG76919.1| DNA replication and repair protein RecF [Dethiobacter alkaliphilus AHT 1] Length = 369 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L IE+ ++R ++ + +E ++ ++ G N GK++L E++ ++ G + R ++ Sbjct: 1 MRLETIELRNYRNYSSL-SLELNPNINLLFGSNAQGKTNLLESVAFIAAGRSFRTRN 56 >gi|199598230|ref|ZP_03211651.1| Recombinational DNA repair ATPase (RecF pathway) [Lactobacillus rhamnosus HN001] gi|199590833|gb|EDY98918.1| Recombinational DNA repair ATPase (RecF pathway) [Lactobacillus rhamnosus HN001] Length = 372 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G+N GK++L EAI L + R + Sbjct: 1 MKLDHLSLKNYRNYAMVDT-AFSPEINVLIGENAQGKTNLLEAIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRFGSD 66 >gi|47123398|gb|AAH70161.1| SMC4 protein [Homo sapiens] Length = 459 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|62020536|gb|AAH01557.1| SMC4 protein [Homo sapiens] gi|76780203|gb|AAI06034.1| SMC4 protein [Homo sapiens] Length = 459 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|117923322|ref|YP_863939.1| ATP binding protein [Magnetococcus sp. MC-1] gi|117607078|gb|ABK42533.1| ATP binding protein [Magnetococcus sp. MC-1] Length = 454 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL + +S+FR F E +I F D+LT++ QNG GK+++ +AI Y Sbjct: 1 MKLNTLTLSNFRCF-ESLEITFDDYLTVLVAQNGGGKTAILDAIGVALGPY 50 >gi|328676483|gb|AEB27353.1| DNA repair protein RecN [Francisella cf. novicida Fx1] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|224457071|ref|ZP_03665544.1| DNA repair protein RecN [Francisella tularensis subsp. tularensis MA00-2987] gi|254874788|ref|ZP_05247498.1| DNA repair protein recN [Francisella tularensis subsp. tularensis MA00-2987] gi|254840787|gb|EET19223.1| DNA repair protein recN [Francisella tularensis subsp. tularensis MA00-2987] Length = 547 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|208780476|ref|ZP_03247816.1| DNA repair protein RecN [Francisella novicida FTG] gi|208743622|gb|EDZ89926.1| DNA repair protein RecN [Francisella novicida FTG] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|187931289|ref|YP_001891273.1| DNA repair protein RecN [Francisella tularensis subsp. mediasiatica FSC147] gi|187712198|gb|ACD30495.1| DNA repair protein RecN [Francisella tularensis subsp. mediasiatica FSC147] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|170285184|gb|AAI60994.1| LOC100145425 protein [Xenopus (Silurana) tropicalis] Length = 911 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ + Q I V G NG GKS+L +A ++ Sbjct: 4 MKQLIIENFKSWGGRQVIGPFLRFNCVIGPNGSGKSNLMDAFSFVMGE 51 >gi|162417866|ref|YP_001604554.1| RecF/RecN/SMC domain-containing protein [Yersinia pestis Angola] gi|162350838|gb|ABX84787.1| RecF/RecN/SMC domain protein [Yersinia pestis Angola] Length = 638 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYGY 77 K L +++ +F + L ++ G NG GKS+L ++ W YG Sbjct: 1 MKFLKLQVENFMALASAEVELDQRGLVLIQGVNSGDSSAASNGAGKSTLMNSLMWCLYGE 60 Query: 78 TQRRKHGDSIKKRSIK 93 T GD + + Sbjct: 61 TAHGVKGDDVLSTGHE 76 >gi|254369071|ref|ZP_04985084.1| hypothetical protein FTAG_00918 [Francisella tularensis subsp. holarctica FSC022] gi|157121992|gb|EDO66162.1| hypothetical protein FTAG_00918 [Francisella tularensis subsp. holarctica FSC022] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|254372379|ref|ZP_04987869.1| hypothetical protein FTCG_01603 [Francisella tularensis subsp. novicida GA99-3549] gi|151570107|gb|EDN35761.1| hypothetical protein FTCG_01603 [Francisella novicida GA99-3549] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|118497019|ref|YP_898069.1| DNA repair protein [Francisella tularensis subsp. novicida U112] gi|194324254|ref|ZP_03058028.1| DNA repair protein RecN [Francisella tularensis subsp. novicida FTE] gi|118422925|gb|ABK89315.1| DNA repair protein [Francisella novicida U112] gi|194321701|gb|EDX19185.1| DNA repair protein RecN [Francisella tularensis subsp. novicida FTE] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|89255800|ref|YP_513162.1| DNA repair protein recN [Francisella tularensis subsp. holarctica LVS] gi|115314293|ref|YP_763016.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica OSU18] gi|156501780|ref|YP_001427845.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009617|ref|ZP_02274548.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica FSC200] gi|254367163|ref|ZP_04983194.1| DNA repair protein recN [Francisella tularensis subsp. holarctica 257] gi|290952941|ref|ZP_06557562.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica URFT1] gi|295313852|ref|ZP_06804422.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica URFT1] gi|89143631|emb|CAJ78829.1| DNA repair protein recN [Francisella tularensis subsp. holarctica LVS] gi|115129192|gb|ABI82379.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica OSU18] gi|134252984|gb|EBA52078.1| DNA repair protein recN [Francisella tularensis subsp. holarctica 257] gi|156252383|gb|ABU60889.1| DNA repair protein RecN [Francisella tularensis subsp. holarctica FTNF002-00] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|74228735|dbj|BAE21860.1| unnamed protein product [Mus musculus] Length = 451 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|56707987|ref|YP_169883.1| DNA repair protein recN [Francisella tularensis subsp. tularensis SCHU S4] gi|110670458|ref|YP_667015.1| DNA repair protein recN [Francisella tularensis subsp. tularensis FSC198] gi|134302221|ref|YP_001122190.1| DNA repair protein RecN [Francisella tularensis subsp. tularensis WY96-3418] gi|254370472|ref|ZP_04986477.1| DNA repair protein [Francisella tularensis subsp. tularensis FSC033] gi|56604479|emb|CAG45519.1| DNA repair protein recN [Francisella tularensis subsp. tularensis SCHU S4] gi|110320791|emb|CAL08902.1| DNA repair protein recN [Francisella tularensis subsp. tularensis FSC198] gi|134049998|gb|ABO47069.1| DNA repair protein RecN [Francisella tularensis subsp. tularensis WY96-3418] gi|151568715|gb|EDN34369.1| DNA repair protein [Francisella tularensis subsp. tularensis FSC033] gi|282159176|gb|ADA78567.1| DNA repair protein RecN [Francisella tularensis subsp. tularensis NE061598] Length = 549 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LLHLSIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDD 58 >gi|332879181|ref|ZP_08446879.1| RecF/RecN/SMC protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682839|gb|EGJ55738.1| RecF/RecN/SMC protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 593 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS FR F +I F + I+ G+N GK+++ +A+ Sbjct: 1 MYLSQLHISKFRVFDDITLY-FKSGINILIGENNSGKTAIIDALRICLG 48 >gi|295398132|ref|ZP_06808181.1| recombination protein F [Aerococcus viridans ATCC 11563] gi|294973651|gb|EFG49429.1| recombination protein F [Aerococcus viridans ATCC 11563] Length = 371 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L DI++ FR + ++ + F+ + + G+N GK+SL EAI + + R + Sbjct: 1 MQLNDIKLKDFRNYEDLT-VTFSPGVNVFIGENAQGKTSLLEAIYMMSLARSHRTANEKD 59 Query: 87 IKKRSIK 93 Sbjct: 60 TIHWKQD 66 >gi|328699504|ref|XP_003240955.1| PREDICTED: structural maintenance of chromosomes protein 3-like [Acyrthosiphon pisum] Length = 1204 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 MFIKQVIIHGFKSYREQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVL 49 >gi|188535560|ref|YP_001909357.1| recombination protein F [Erwinia tasmaniensis Et1/99] gi|226737797|sp|B2VCE1|RECF_ERWT9 RecName: Full=DNA replication and repair protein recF gi|188030602|emb|CAO98497.1| DNA replication and repair protein RecF [Erwinia tasmaniensis Et1/99] Length = 361 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ENADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHDQD 66 >gi|119491437|ref|ZP_01623456.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] gi|119453432|gb|EAW34595.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] Length = 688 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRG-FTEIQKIEFADHL---TIVNGQNGYGKSSLSEAIEWLFY 75 KL+ I + +FR +++ +I A + T+++G NG GK++L A W+ Y Sbjct: 1 MKLISIRLCNFRQLYSQTPEIILASGVRNTTVIHGNNGAGKTTLMNAFTWVLY 53 >gi|281344217|gb|EFB19801.1| hypothetical protein PANDA_002977 [Ailuropoda melanoleuca] Length = 1050 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 8 IESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 67 >gi|217077030|ref|YP_002334746.1| exonuclease sbcc, putative [Thermosipho africanus TCF52B] gi|217036883|gb|ACJ75405.1| exonuclease sbcc, putative [Thermosipho africanus TCF52B] Length = 927 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +FR + + EF + ++ G+NG GKSS+ EA+ F+ + R I Sbjct: 3 IKKVCLKNFRVHKDRE-FEFKPGINLLLGKNGTGKSSIFEALSVAFFSKSPRGTLNSIIT 61 Query: 89 KRSIK 93 K Sbjct: 62 NDGSK 66 >gi|218782597|ref|YP_002433915.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763981|gb|ACL06447.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] Length = 572 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ IEI +FR F +D L + G GKS++ +AI++ + Sbjct: 1 MRIRKIEILNFRCIK-----RFFWCPSDGLNCLIGPGDSGKSTVIDAIDYCLGARRTAQF 55 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 + TP+ + + + Sbjct: 56 TDADFHNLDVDTPISITLTL 75 >gi|12857523|dbj|BAB31030.1| unnamed protein product [Mus musculus] Length = 214 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|319399911|gb|EFV88157.1| DNA replication and repair protein recF [Staphylococcus epidermidis FRI909] Length = 371 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNSDYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|294138804|ref|YP_003554782.1| DNA replication and repair protein RecF [Shewanella violacea DSS12] gi|293325273|dbj|BAJ00004.1| DNA replication and repair protein RecF [Shewanella violacea DSS12] Length = 365 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q + A+ + ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLHIETFRNIASAQLLP-AEGINLIYGLNGSGKTSILEAIYFLGMGRSFRS 54 >gi|242243252|ref|ZP_04797697.1| recombination protein F [Staphylococcus epidermidis W23144] gi|242233201|gb|EES35513.1| recombination protein F [Staphylococcus epidermidis W23144] Length = 371 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNSDYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1785 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I R + + Q++EFA +T++ G NG GKS++ E ++ G Sbjct: 4 LEKIGIQGIRSYGDEEAQELEFASPITVIYGNNGSGKSTIIECLKMSCTG 53 >gi|95929503|ref|ZP_01312246.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] gi|95134619|gb|EAT16275.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] Length = 727 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +E+ F F + EF + +V G N GKS++ +I + +G ++++ Sbjct: 3 LRSLELKSFGRFNDKT-FEFRRGMNLVVGANEAGKSTMMASIPAVLFGLRDKQRY 56 >gi|126432617|ref|YP_001068308.1| recombination protein F [Mycobacterium sp. JLS] gi|166220716|sp|A3PSE0|RECF_MYCSJ RecName: Full=DNA replication and repair protein recF gi|126232417|gb|ABN95817.1| DNA replication and repair protein RecF [Mycobacterium sp. JLS] Length = 380 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MFVRHLTLTDFRSWA-RADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|58616769|ref|YP_195968.1| recombination protein F [Ehrlichia ruminantium str. Gardel] gi|58416381|emb|CAI27494.1| DNA replication and repair protein recF [Ehrlichia ruminantium str. Gardel] Length = 372 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +FR + I+ ++ + ++ G+NG GK+++ EAI L G R +S+ Sbjct: 8 YIQNLRLINFRNYLNIE-LDTSSKSVVLLGKNGAGKTNILEAISLLSKGTGIRGVSMESM 66 Query: 88 KKRSIKTP 95 + S P Sbjct: 67 QNSSSDLP 74 >gi|294629194|ref|ZP_06707754.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292832527|gb|EFF90876.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 649 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + + F + Q++ F+ + IV G NG GK++L A + YG R Sbjct: 1 MLTLDRLTVEDFGPYRGRQEMVFSSDRGVYIVYGPNGRGKTTLHNAFRYALYGEIHGR 58 >gi|261328374|emb|CBH11351.1| structural maintenance of chromosome 3 ,putative [Trypanosoma brucei gambiense DAL972] Length = 1199 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +I IS FR + E + E + ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKNILISGFRSYREQAFEQELSPKNNVIVGKNGAGKSNFFAAIQFVL 49 >gi|260184856|ref|ZP_05762330.1| recombination protein F [Mycobacterium tuberculosis CPHL_A] gi|289445528|ref|ZP_06435272.1| DNA replication and repair protein recF [Mycobacterium tuberculosis CPHL_A] gi|289418486|gb|EFD15687.1| DNA replication and repair protein recF [Mycobacterium tuberculosis CPHL_A] Length = 385 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NGYGK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADSP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRVGTD 66 >gi|300775232|ref|ZP_07085094.1| ATPase involved in DNA repair [Chryseobacterium gleum ATCC 35910] gi|300505972|gb|EFK37108.1| ATPase involved in DNA repair [Chryseobacterium gleum ATCC 35910] Length = 1011 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 31 DIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I + E Q I+F + L + G G GKSS+ EAI + YG T+R Sbjct: 5 QLTIEGLYSYRERQTIDFRNLTEAGLFGIFGAVGSGKSSVLEAISFALYGETER 58 >gi|198449465|ref|XP_002136902.1| GA26880 [Drosophila pseudoobscura pseudoobscura] gi|198130619|gb|EDY67460.1| GA26880 [Drosophila pseudoobscura pseudoobscura] Length = 1038 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L+ ++ + + HF + E+ + +L ++ G NG GKS++ AI G Q Sbjct: 11 QLMGRIKSVYVKHFVSYKEVTYYP-SKYLNVLTGPNGSGKSTIVAAIMIGLGGEPQLLDR 69 Query: 84 GDSIKKRSIKTPMPMCMAV 102 S+ +AV Sbjct: 70 SASLIDYIQSGETEATIAV 88 >gi|197106846|ref|YP_002132223.1| recombinational DNA repair ATPase [Phenylobacterium zucineum HLK1] gi|196480266|gb|ACG79794.1| recombinational DNA repair ATPase [Phenylobacterium zucineum HLK1] Length = 377 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ FR + + + + G NG GK++L EA+ +L G R G SI Sbjct: 5 LTRLSLTDFRSYASAELALDGRPV-WLAGPNGSGKTNLLEAVSFLIPG---RGLRGASIA 60 Query: 89 KRSIKTPMP 97 + + P Sbjct: 61 EVGRRLPGE 69 >gi|72389452|ref|XP_845021.1| structural maintenance of chromosome 3 [Trypanosoma brucei TREU927] gi|62176704|gb|AAX70804.1| structural maintenance of chromosome 3, putative [Trypanosoma brucei] gi|70801555|gb|AAZ11462.1| structural maintenance of chromosome 3, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1199 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +I IS FR + E + E + ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKNILISGFRSYREQAFEQELSPKNNVIVGKNGAGKSNFFAAIQFVL 49 >gi|10697129|emb|CAC12695.1| putative structural maintenance of chromosome 3 protein [Trypanosoma brucei] Length = 1260 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +I IS FR + E + E + ++ G+NG GKS+ AI+++ Sbjct: 1 MYIKNILISGFRSYREQAFEQELSPKNNVIVGKNGAGKSNFFAAIQFVL 49 >gi|260063479|ref|YP_003196559.1| DNA replication and repair protein RecF [Robiginitalea biformata HTCC2501] gi|88782923|gb|EAR14097.1| DNA replication and repair protein RecF, ABC family ATPase [Robiginitalea biformata HTCC2501] Length = 359 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E + F + + G NG GK+++ +AI L +G + Sbjct: 1 MHLNRLSLLNYKNF-ESRDFSFDSKINCLVGPNGIGKTNVLDAIYHLAFGKS 51 >gi|83941667|ref|ZP_00954129.1| recombination protein F [Sulfitobacter sp. EE-36] gi|83847487|gb|EAP85362.1| recombination protein F [Sulfitobacter sp. EE-36] Length = 365 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +SHFR + I+ + G NG GK+++ EA+ L G RR Sbjct: 4 LYLSQLTLSHFRSH-KRAVIDCDTRPVSIFGPNGAGKTNILEAVSLLSPGRGLRRSSASD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MTRR 66 >gi|257066033|ref|YP_003152289.1| SMC domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256797913|gb|ACV28568.1| SMC domain protein [Anaerococcus prevotii DSM 20548] Length = 1011 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ F + E I+F + +++G G GK+S+ +AI + YG R Sbjct: 1 MRPRRLKMRGFITYKEEIDIDFTTLFEKKIFLISGATGSGKTSIFDAINFALYGKVARDI 60 Query: 83 HGDSIK 88 D ++ Sbjct: 61 SADRLR 66 >gi|302894179|ref|XP_003045970.1| condensin complex component SMC2 [Nectria haematococca mpVI 77-13-4] gi|256726897|gb|EEU40257.1| condensin complex component SMC2 [Nectria haematococca mpVI 77-13-4] Length = 1173 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +++++ I F+ + I + + + G NG GKS++ +AI ++ Sbjct: 1 MRVIEVIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLG 50 >gi|16082825|ref|NP_395379.1| putative exonuclease subunit 2 [Yersinia pestis CO92] gi|108793572|ref|YP_636723.1| exonuclease subunit 2 [Yersinia pestis Antiqua] gi|108793774|ref|YP_636613.1| exonuclease subunit 2 [Yersinia pestis Nepal516] gi|145597237|ref|YP_001154702.1| exonuclease subunit 2 [Yersinia pestis Pestoides F] gi|149192756|ref|YP_001293987.1| putative exonuclease subunit 2 [Yersinia pestis CA88-4125] gi|167466706|ref|ZP_02331410.1| putative exonuclease subunit 2 [Yersinia pestis FV-1] gi|229896979|ref|ZP_04512138.1| putative exonuclease subunit 2 [Yersinia pestis Pestoides A] gi|229897734|ref|ZP_04512889.1| putative exonuclease subunit 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900316|ref|ZP_04515451.1| putative exonuclease subunit 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229904839|ref|ZP_04519949.1| putative exonuclease subunit 2 [Yersinia pestis Nepal516] gi|270491027|ref|ZP_06208100.1| putative DNA sulfur modification protein DndD [Yersinia pestis KIM D27] gi|294502029|ref|YP_003565766.1| putative exonuclease subunit 2 [Yersinia pestis Z176003] gi|5834725|emb|CAB55222.1| putative exonuclease subunit 2 [Yersinia pestis CO92] gi|108777838|gb|ABG20356.1| exonuclease subunit 2 [Yersinia pestis Nepal516] gi|108782119|gb|ABG16176.1| exonuclease subunit 2 [Yersinia pestis Antiqua] gi|145213005|gb|ABP42410.1| exonuclease subunit 2 [Yersinia pestis Pestoides F] gi|148872414|gb|ABR14903.1| putative exonuclease subunit 2 [Yersinia pestis CA88-4125] gi|229678154|gb|EEO74260.1| putative exonuclease subunit 2 [Yersinia pestis Nepal516] gi|229686675|gb|EEO78756.1| putative exonuclease subunit 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229693315|gb|EEO83365.1| putative exonuclease subunit 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700015|gb|EEO88055.1| putative exonuclease subunit 2 [Yersinia pestis Pestoides A] gi|262363923|gb|ACY60642.1| putative exonuclease subunit 2 [Yersinia pestis D106004] gi|262364079|gb|ACY64415.1| putative exonuclease subunit 2 [Yersinia pestis D182038] gi|270335008|gb|EFA45786.1| putative DNA sulfur modification protein DndD [Yersinia pestis KIM D27] gi|294352500|gb|ADE66556.1| putative exonuclease subunit 2 [Yersinia pestis Z176003] gi|320017566|gb|ADW01136.1| putative exonuclease subunit 2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 638 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYGY 77 K L +++ +F + L ++ G NG GKS+L ++ W YG Sbjct: 1 MKFLKLQVENFMALASAEVELDQRGLVLIQGVNSGDSSAASNGAGKSTLMNSLMWCLYGE 60 Query: 78 TQRRKHGDSIKKRSIK 93 T GD + + Sbjct: 61 TAHGVKGDDVLSTGHE 76 >gi|303391639|ref|XP_003074049.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] gi|303303198|gb|ADM12689.1| chromosome segregation ATPase [Encephalitozoon intestinalis ATCC 50506] Length = 1025 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +E+ +F+ F ++F + G NG GKSS++ A+ F G + G SI Sbjct: 9 VVSMELENFQTFR-KISLKFCPSFNFIAGPNGSGKSSIANAMVLAFGGTPRIIGRGKSI 66 >gi|197215656|gb|ACH53047.1| RAD50 homolog isoform 1 (predicted) [Otolemur garnettii] Length = 1311 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|18466790|ref|NP_569597.1| hypothetical protein HCM2.0125c [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16506106|emb|CAD09992.1| hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] Length = 638 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYGY 77 K L +++ +F + L ++ G NG GKS+L ++ W YG Sbjct: 1 MKFLKLQVENFMALASAEVELDQRGLVLIQGVNSGDSSAASNGAGKSTLMNSLMWCLYGE 60 Query: 78 TQRRKHGDSIKKRSIK 93 T GD + + Sbjct: 61 TAHGVKGDDVLSTGHE 76 >gi|328956386|ref|YP_004373772.1| DNA replication and repair protein RecF [Carnobacterium sp. 17-4] gi|328672710|gb|AEB28756.1| DNA replication and repair protein RecF [Carnobacterium sp. 17-4] Length = 373 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I +S++R + E ++ F+ + + G+N GK+SL EAI L + R + Sbjct: 1 MLLKEIHLSNYRNY-EHAEVIFSKGINVFLGENAQGKTSLMEAIYVLAMARSHRTANDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 TIRWEQE 66 >gi|296193757|ref|XP_002744663.1| PREDICTED: DNA repair protein RAD50-like [Callithrix jacchus] Length = 511 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|149726377|ref|XP_001504492.1| PREDICTED: similar to RAD50 homolog isoform 1 (predicted) isoform 1 [Equus caballus] Length = 1312 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|31795340|ref|NP_857792.1| putative exonuclease [Yersinia pestis KIM] gi|40787957|ref|NP_857675.2| exonuclease [Yersinia pestis KIM] gi|45478637|ref|NP_995493.1| putative exonuclease subunit 2 [Yersinia pestis biovar Microtus str. 91001] gi|52788096|ref|YP_093924.1| putative exonuclease [Yersinia pestis] gi|3883010|gb|AAC82670.1| putative exonuclease [Yersinia pestis KIM 10] gi|45357290|gb|AAS58684.1| putative exonuclease subunit 2 [Yersinia pestis biovar Microtus str. 91001] gi|52538025|emb|CAG27450.1| putative exonuclease [Yersinia pestis] Length = 642 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYGY 77 K L +++ +F + L ++ G NG GKS+L ++ W YG Sbjct: 5 MKFLKLQVENFMALASAEVELDQRGLVLIQGVNSGDSSAASNGAGKSTLMNSLMWCLYGE 64 Query: 78 TQRRKHGDSIKKRSIK 93 T GD + + Sbjct: 65 TAHGVKGDDVLSTGHE 80 >gi|301754245|ref|XP_002913000.1| PREDICTED: DNA repair protein RAD50-like [Ailuropoda melanoleuca] Length = 1312 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|301620437|ref|XP_002939584.1| PREDICTED: DNA repair protein RAD50 [Xenopus (Silurana) tropicalis] Length = 1269 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTG 55 >gi|259156455|gb|ACV96400.1| SMC domain protein [Vibrio cholerae Ind5] Length = 347 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + FRGF + + + + L ++ G NG GKSS EA+E+ G + Sbjct: 82 LKSISVGPFRGFAKEEILNLNNLLVLIYGPNGAGKSSFCEALEFGLLGAVEE 133 >gi|225174508|ref|ZP_03728507.1| SMC domain protein [Dethiobacter alkaliphilus AHT 1] gi|225170293|gb|EEG79088.1| SMC domain protein [Dethiobacter alkaliphilus AHT 1] Length = 1021 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ ++ + + + + + I F + L ++G NG GK+++ EAI + + Sbjct: 1 MKIYELHLKNCKCYEDET-INFQEGLNFISGVNGAGKTTIIEAIGLVLF 48 >gi|281183185|ref|NP_001162505.1| DNA repair protein RAD50 [Papio anubis] gi|297295039|ref|XP_001099384.2| PREDICTED: DNA repair protein RAD50-like [Macaca mulatta] gi|159461525|gb|ABW96800.1| RAD50 homolog, isoform 1 (predicted) [Papio anubis] Length = 1311 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|328958190|ref|YP_004375576.1| DNA ATP-dependent repair enzyme [Carnobacterium sp. 17-4] gi|328674514|gb|AEB30560.1| DNA ATP-dependent repair enzyme [Carnobacterium sp. 17-4] Length = 1019 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F + E I+F L +V+G G GK+++ +AI + Y Sbjct: 1 MRPLKLVMNAFGPYKEKVVIDFTQFHQQTLFLVSGPTGAGKTTIFDAIAYALYDDASGTS 60 Query: 83 HGDSIKKRSIKTPMPMC 99 G K T +C Sbjct: 61 RGKDSFKSQFATDEVLC 77 >gi|317128434|ref|YP_004094716.1| DNA repair protein RecN [Bacillus cellulosilyticus DSM 2522] gi|315473382|gb|ADU29985.1| DNA repair protein RecN [Bacillus cellulosilyticus DSM 2522] Length = 575 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+++ I +F + I F LT++ G+ G GKS + +AI L G R D ++ Sbjct: 2 LMELSIRNF-AIIDYTTISFEKGLTVLTGETGAGKSIIIDAIGQLIGG----RGSVDFVR 56 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 S + + ++ + Y L Sbjct: 57 HGSARAEIEGLFSIEKSSYML 77 >gi|281348671|gb|EFB24255.1| hypothetical protein PANDA_000728 [Ailuropoda melanoleuca] Length = 1311 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|183221549|ref|YP_001839545.1| putative nucleoside triphosphate hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911630|ref|YP_001963185.1| ATP-dependent endonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776306|gb|ABZ94607.1| ATP-dependent endonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779971|gb|ABZ98269.1| Putative nucleoside triphosphate hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 458 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + K+ IEI +FR I+F ++ G N GKS++ A+E F G R+K+ Sbjct: 1 MIKIEHIEILNFRSIVSE-SIKFGCKEYNVIVGANNSGKSNILRALELFFNGTIDRKKY 58 >gi|311745376|ref|ZP_07719161.1| RecF protein [Algoriphagus sp. PR1] gi|126577921|gb|EAZ82141.1| RecF protein [Algoriphagus sp. PR1] Length = 366 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L +++ F+ E ++ F+ + + G NG GK+++ + I +L + Sbjct: 1 MHLKSLDLLQFKNH-EKTQLVFSPQINCIVGLNGSGKTNILDGIHYLSLTKSA 52 >gi|73980575|ref|XP_532882.2| PREDICTED: similar to SMC6 protein [Canis familiaris] Length = 1606 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 563 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 622 >gi|26353334|dbj|BAC40297.1| unnamed protein product [Mus musculus] Length = 602 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 140 >gi|153005005|ref|YP_001379330.1| DNA repair exonuclease, SbcC [Anaeromyxobacter sp. Fw109-5] gi|152028578|gb|ABS26346.1| DNA repair exonuclease, SbcC [Anaeromyxobacter sp. Fw109-5] Length = 1006 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + L +E+ F + QK++F L +++G G GK++L +A+ + YG Sbjct: 1 MRPLSLELQAFGPYARAQKVDFDALGGADLFLIHGPTGAGKTTLFDAMTFALYG 54 >gi|40807120|gb|AAH65259.1| SMC4 protein [Homo sapiens] Length = 423 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 142 >gi|32470927|ref|NP_863920.1| hypothetical protein RB457 [Rhodopirellula baltica SH 1] gi|32443072|emb|CAD71594.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 392 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 31/45 (68%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +I I +F+ ++ +EF+D +T++ G++G GKS+ EA+ +L Sbjct: 2 IHEIRIQNFKSIQDVT-VEFSD-VTVLVGRSGTGKSNFVEAVRFL 44 >gi|315056489|ref|XP_003177619.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893] gi|311339465|gb|EFQ98667.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893] Length = 1274 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 8 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 58 >gi|300021543|ref|YP_003754154.1| SMC domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523364|gb|ADJ21833.1| SMC domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 455 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++++FR + + ++ G NG GK++L EA+ L G RR + Sbjct: 11 VERLQLTNFRSYAAAN-VATDAGPQVIVGANGSGKTNLLEALSLLSPGQGLRRVPFSDLV 69 Query: 89 KRSIK 93 + Sbjct: 70 RSGGD 74 >gi|282898771|ref|ZP_06306758.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] gi|281196298|gb|EFA71208.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] Length = 689 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGFTEIQKI------EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I+ +FR F EF + TI++G NG GK+SL W+ Y Sbjct: 1 MKLTSIKFCNFRSFYGQTPEIAIAGGEFQ-NTTIIHGNNGAGKTSLLNGFTWVLYE 55 >gi|260887985|ref|ZP_05899248.1| putative exonuclease SbcC [Selenomonas sputigena ATCC 35185] gi|330838535|ref|YP_004413115.1| SMC domain protein [Selenomonas sputigena ATCC 35185] gi|260862236|gb|EEX76736.1| putative exonuclease SbcC [Selenomonas sputigena ATCC 35185] gi|329746299|gb|AEB99655.1| SMC domain protein [Selenomonas sputigena ATCC 35185] Length = 1024 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F + + ++F A +++G+ G GK++L +AI + FYG Sbjct: 1 MRPLRLTMEAFGSYGKKTVVDFTELGARSFFLIHGRTGSGKTTLLDAICFAFYGEASMAG 60 Query: 83 HGDSIKK-----RSIKTPMPMCMAVPRCKYQL 109 ++ + R +T + A+ KY + Sbjct: 61 RTGTMMRTDEAPREARTSVDFVFALGTQKYHI 92 >gi|242769947|ref|XP_002341877.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500] gi|218725073|gb|EED24490.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500] Length = 1328 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 31 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 81 >gi|284004946|ref|NP_001164819.1| DNA repair protein RAD50 [Oryctolagus cuniculus] gi|217273043|gb|ACK28136.1| RAD50 homolog isoform 1 (predicted) [Oryctolagus cuniculus] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|242022760|ref|XP_002431806.1| DNA repair protein RAD50, putative [Pediculus humanus corporis] gi|212517138|gb|EEB19068.1| DNA repair protein RAD50, putative [Pediculus humanus corporis] Length = 1330 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I+I R F ++Q + F LT++ G+NG GKS++ E + ++ Sbjct: 4 LNKIKICGIRSFGCEEEDMQTVHFQKPLTLILGENGCGKSTIIECLRYV 52 >gi|109287972|ref|YP_654666.1| hypothetical protein MIV094L [Invertebrate iridescent virus 3] gi|123868013|sp|Q196W6|VF050_IIV3 RecName: Full=Uncharacterized protein 094L gi|106073595|gb|ABF82124.1| hypothetical protein MIV094L [Aedes taeniorhynchus iridescent virus] Length = 829 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 31 DIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +F+ +T FA D T++ G +G GKS++ A+++ +G T R Sbjct: 2 KLTLKNFKCYTSAT-FNFALDSTTLITGPSGQGKSTILLAVQFALFGMTGHR 52 >gi|86133307|ref|ZP_01051889.1| DNA replication and repair protein RecF [Polaribacter sp. MED152] gi|85820170|gb|EAQ41317.1| DNA replication and repair protein RecF [Polaribacter sp. MED152] Length = 359 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F+ Q +F + + G NG GK+++ +AI +L + + Sbjct: 1 MYLQQLSLVNFKNIAS-QSFDFQEKINCFVGNNGVGKTNVLDAIYYLSFTKS 51 >gi|319941125|ref|ZP_08015461.1| hypothetical protein HMPREF9464_00680 [Sutterella wadsworthensis 3_1_45B] gi|319805482|gb|EFW02284.1| hypothetical protein HMPREF9464_00680 [Sutterella wadsworthensis 3_1_45B] Length = 527 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKHG 84 + + I F+ FT + +EF ++ I+ G+N GKS++ +AI+ + Y + + Sbjct: 3 YIKSLHIEGFKKFTNLD-VEFNQYMNILVGENEVGKSTILDAIKLVLNQQYKNSDKSVLK 61 Query: 85 DSIKKRSIK 93 D + I+ Sbjct: 62 DLFNAKQIR 70 >gi|315634817|ref|ZP_07890099.1| recombination protein F [Aggregatibacter segnis ATCC 33393] gi|315476369|gb|EFU67119.1| recombination protein F [Aggregatibacter segnis ATCC 33393] Length = 358 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR +E + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLTVENFRNLQA-VDLELDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDQP 66 >gi|311253094|ref|XP_003125390.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Sus scrofa] Length = 1097 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAIATNRGSSLK 113 >gi|307353930|ref|YP_003894981.1| hypothetical protein Mpet_1790 [Methanoplanus petrolearius DSM 11571] gi|307157163|gb|ADN36543.1| conserved hypothetical protein [Methanoplanus petrolearius DSM 11571] Length = 603 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL+ + + +FR + + + I+ D LT + G+N GKSS+ EA+E F + + Sbjct: 1 MKLISVTLKNFRCYLDEKTIQIQD-LTTIIGKNDIGKSSVLEALEIFFNNDSVK 53 >gi|261868625|ref|YP_003256547.1| recombination protein F [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413957|gb|ACX83328.1| DNA replication and repair protein RecF [Aggregatibacter actinomycetemcomitans D11S-1] Length = 358 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR +E + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLTVENFRNLQA-VDLELDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDQP 66 >gi|260809256|ref|XP_002599422.1| hypothetical protein BRAFLDRAFT_287729 [Branchiostoma floridae] gi|229284700|gb|EEN55434.1| hypothetical protein BRAFLDRAFT_287729 [Branchiostoma floridae] Length = 187 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L+ + I R F + Q I+F + LTI+ G NG GK+++ E ++++ G Sbjct: 4 LVKMSIQGIRSFGPDDKDKQVIKFFNPLTIIQGHNGAGKTTIIECLKYMTTG 55 >gi|159899697|ref|YP_001545944.1| SMC domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892736|gb|ABX05816.1| SMC domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1023 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Query: 30 LDIEISHFRGFTEIQ-KIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + +F + + ++F + ++G+NG GKS+L +AI W +G + + I Sbjct: 4 EKLRVRNFMCYRDDVPTLDFEGIRVACLSGENGAGKSALLDAITWALWGKARVSSDDELI 63 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 + + + + +V + Y++ Sbjct: 64 ALGAQEMEVDLQFSVAKTSYRV 85 >gi|70946723|ref|XP_743047.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56522355|emb|CAH84937.1| hypothetical protein PC301329.00.0 [Plasmodium chabaudi chabaudi] Length = 419 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F+ + I T + G NG GKS++ + I ++ G + +++ Sbjct: 43 IKYLTVCNFKSYEGENIIGPFSKFTAIIGPNGSGKSNIMDCICFVL-GIDNKYLRIKNLR 101 Query: 89 KRSIKTPMP 97 K Sbjct: 102 KLIYHKENE 110 >gi|332253761|ref|XP_003276000.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform 1 [Nomascus leucogenys] gi|332253763|ref|XP_003276001.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform 2 [Nomascus leucogenys] gi|332253765|ref|XP_003276002.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform 3 [Nomascus leucogenys] Length = 1091 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 48 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 107 >gi|332221676|ref|XP_003259989.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Nomascus leucogenys] Length = 1313 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|297675945|ref|XP_002815909.1| PREDICTED: DNA repair protein RAD50-like [Pongo abelii] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|119582732|gb|EAW62328.1| RAD50 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1315 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|114601587|ref|XP_001163412.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pan troglodytes] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|73971132|ref|XP_531901.2| PREDICTED: similar to RAD50 homolog isoform 1 [Canis familiaris] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|19924129|ref|NP_005723.2| DNA repair protein RAD50 [Homo sapiens] gi|60392986|sp|Q92878|RAD50_HUMAN RecName: Full=DNA repair protein RAD50; Short=hRAD50 gi|5739041|gb|AAD50325.1|AF057299_1 RAD50-2 protein [Homo sapiens] gi|1518806|gb|AAB07119.1| Rad50 [Homo sapiens] gi|119582733|gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|223459632|gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|331219761|ref|XP_003322557.1| DNA repair protein RAD50 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301547|gb|EFP78138.1| DNA repair protein RAD50 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1291 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I R F I+F LT++ G NG GK+++ E+++++ G G Sbjct: 3 QIDKLAIRGIRSFDNQSIAVIQFYSPLTVIVGHNGSGKTTIIESLKYITTGDLPPNTKG 61 >gi|255282234|ref|ZP_05346789.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] gi|255267182|gb|EET60387.1| putative RecF/RecN/SMC N domain protein [Bryantella formatexigens DSM 14469] Length = 429 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQRRKH 83 K+ +EI + + ++ + LTI+ G NG GK+S+ ++I W G R + Sbjct: 1 MKINQLEIENVKRIKAVKVEPALNGLTIIGGNNGQGKTSVLDSITWALGGDRYRPSRAQR 60 Query: 84 GDSIKKRSIKTPMPMCMAVPR 104 S+ I+ M + V R Sbjct: 61 DGSVIHPYIRITMDNGLVVER 81 >gi|146327056|gb|AAI40006.1| RAD50 protein [Homo sapiens] Length = 110 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|226322553|ref|ZP_03798071.1| hypothetical protein COPCOM_00325 [Coprococcus comes ATCC 27758] gi|225209047|gb|EEG91401.1| hypothetical protein COPCOM_00325 [Coprococcus comes ATCC 27758] Length = 725 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + IS F + + +I L ++ G G GK+++ +AI + YG + Sbjct: 1 MRPIKLTISAFGPYAKETEIILDELGERGLYLITGDTGAGKTTIFDAIAFALYGEASGNE 60 Query: 83 HGDSIKKRSIKTPM 96 + + P Sbjct: 61 REPGMLRSKYADPK 74 >gi|213626071|gb|AAI70550.1| (XCAP-C) [Xenopus laevis] Length = 1290 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|167045855|gb|ABZ10522.1| RAD50 homolog isoform 1 (predicted) [Callithrix jacchus] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|150005010|ref|YP_001299754.1| putative antigen PgaA [Bacteroides vulgatus ATCC 8482] gi|294778966|ref|ZP_06744381.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides vulgatus PC510] gi|149933434|gb|ABR40132.1| conserved hypothetical protein, putative antigen PgaA [Bacteroides vulgatus ATCC 8482] gi|294447124|gb|EFG15709.1| RecF/RecN/SMC N-terminal domain protein [Bacteroides vulgatus PC510] Length = 445 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I I +FR F + +++ +T+ G+NG GK+SL AI + Sbjct: 3 LKKITIENFRCF-KNYEVDLTPGITVFIGKNGAGKTSLLNAIRYGL 47 >gi|38637815|ref|NP_942789.1| hypothetical protein PHG151 [Ralstonia eutropha H16] gi|32527153|gb|AAP85903.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 571 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L IEI HFRG L + G GKSS+ +AI+ + Sbjct: 3 RLRKIEIRHFRGIQHFTWWP-GPGLNALIGPGDAGKSSILDAIDLCLGARRTAQFGDHDF 61 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 + ++ P+ + + V LK Sbjct: 62 FRMNVDQPIVIEITVGELDDALK 84 >gi|148235651|ref|NP_001081371.1| structural maintenance of chromosomes protein 4 [Xenopus laevis] gi|1722855|sp|P50532|SMC4_XENLA RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome assembly protein XCAP-C; AltName: Full=Chromosome-associated protein C gi|563812|gb|AAA64679.1| XCAP-C [Xenopus laevis] Length = 1290 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|301758366|ref|XP_002915034.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Ailuropoda melanoleuca] Length = 1098 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|291614647|ref|YP_003524804.1| SMC domain protein [Sideroxydans lithotrophicus ES-1] gi|291584759|gb|ADE12417.1| SMC domain protein [Sideroxydans lithotrophicus ES-1] Length = 685 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + I +FR E +EF + + I+ G N GK+++ E+I Sbjct: 1 MHIKTLRIKNFRAI-EDVNVEFDNRVNIIVGPNAIGKTTILESIR 44 >gi|227487660|ref|ZP_03917976.1| recombination protein F [Corynebacterium glucuronolyticum ATCC 51867] gi|227092354|gb|EEI27666.1| recombination protein F [Corynebacterium glucuronolyticum ATCC 51867] Length = 267 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E+ +E +T+ G NG+GK+++ E+I +L + R KH Sbjct: 1 MFVRHLTLKDFRSWPELD-LELGPGVTVFTGANGFGKTNIVESIYYLANLSSHRVKHDAP 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|219871719|ref|YP_002476094.1| recombination protein F [Haemophilus parasuis SH0165] gi|254790479|sp|B8F744|RECF_HAEPS RecName: Full=DNA replication and repair protein recF gi|219691923|gb|ACL33146.1| DNA replication and repair protein RecF [Haemophilus parasuis SH0165] Length = 361 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I++FR T +E G NG GK+SL EAI +L +G + + + Sbjct: 1 MSLSRLIINNFRNLTA-VDLELNHGFNFFIGANGSGKTSLLEAIFYLGHGKSFKSHISNR 59 Query: 87 IKKRSIK 93 I K + + Sbjct: 60 IIKYNQE 66 >gi|145592012|ref|YP_001154014.1| SMC domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283780|gb|ABP51362.1| SMC domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 794 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++++ IE+ +FR + + D + I+ G+ G GK+SL A+E+ YG Sbjct: 1 MWRIERIELENFRSYKGRHVVSLGD-VNILWGRIGAGKTSLLYAVEYALYG 50 >gi|14250920|emb|CAC39248.1| SMC6 protein [Homo sapiens] Length = 1091 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 48 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 107 >gi|85858622|ref|YP_460824.1| exonuclease [Syntrophus aciditrophicus SB] gi|85721713|gb|ABC76656.1| exonuclease [Syntrophus aciditrophicus SB] Length = 1223 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +++F +D + + G G GK++L +A+ YG T R Sbjct: 1 MRILGVRFKNLNSLAGEWQVDFTRPAYISDGIFAITGPTGSGKTTLMDAVCLALYGSTPR 60 >gi|74318701|ref|YP_316441.1| hypothetical protein Tbd_2683 [Thiobacillus denitrificans ATCC 25259] gi|74058196|gb|AAZ98636.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 478 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + +++FRG T ++FA +V G NG GK+++ EA+ L Sbjct: 1 MQINRLTLTNFRGLTNSV-LDFAPGFNLVVGVNGVGKTAVLEALRILL 47 >gi|325283210|ref|YP_004255751.1| DNA replication and repair protein recF [Deinococcus proteolyticus MRP] gi|324315019|gb|ADY26134.1| DNA replication and repair protein recF [Deinococcus proteolyticus MRP] Length = 357 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L + ++R +EF +T V G+NG GK++L EA G T+ Sbjct: 4 VRLSKLSTLNYRNLA-PDTLEFPAGVTGVWGENGAGKTNLLEAAYLALTGRTEAG 57 >gi|229368749|gb|ACQ63030.1| RAD50 homolog isoform 1 (predicted) [Dasypus novemcinctus] Length = 1312 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|57865928|ref|YP_190091.1| recombination protein F [Staphylococcus epidermidis RP62A] gi|251811367|ref|ZP_04825840.1| recombination protein F [Staphylococcus epidermidis BCM-HMP0060] gi|282874724|ref|ZP_06283603.1| DNA replication and repair protein RecF [Staphylococcus epidermidis SK135] gi|293367577|ref|ZP_06614230.1| recombination protein F [Staphylococcus epidermidis M23864:W2(grey)] gi|73914002|sp|Q5HK02|RECF_STAEQ RecName: Full=DNA replication and repair protein recF gi|57636586|gb|AAW53374.1| DNA replication and repair protein RecF [Staphylococcus epidermidis RP62A] gi|251805116|gb|EES57773.1| recombination protein F [Staphylococcus epidermidis BCM-HMP0060] gi|281296440|gb|EFA88955.1| DNA replication and repair protein RecF [Staphylococcus epidermidis SK135] gi|291318290|gb|EFE58683.1| recombination protein F [Staphylococcus epidermidis M23864:W2(grey)] gi|329724141|gb|EGG60659.1| DNA replication and repair protein RecF [Staphylococcus epidermidis VCU144] gi|329735750|gb|EGG72031.1| DNA replication and repair protein RecF [Staphylococcus epidermidis VCU028] gi|329736171|gb|EGG72444.1| DNA replication and repair protein RecF [Staphylococcus epidermidis VCU045] Length = 371 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + MP+ M + + Q+K Sbjct: 60 LIRFKSDYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|27466921|ref|NP_763558.1| recombination protein F [Staphylococcus epidermidis ATCC 12228] gi|38258564|sp|Q8CQK5|RECF_STAES RecName: Full=DNA replication and repair protein recF gi|27314463|gb|AAO03600.1|AE016744_3 DNA repair and genetic recombination protein [Staphylococcus epidermidis ATCC 12228] Length = 371 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EQVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + MP+ M + + Q+K Sbjct: 60 LIRFKSDYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|329936100|ref|ZP_08285899.1| exonuclease [Streptomyces griseoaurantiacus M045] gi|329304418|gb|EGG48297.1| exonuclease [Streptomyces griseoaurantiacus M045] Length = 1002 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + + F F ++F AD L +++G G GKS+L AI + YG Sbjct: 1 MRLHHLTLQAFGPFAGTHTVDFDTLSADGLFLLHGDTGAGKSTLFTAICFALYG 54 >gi|134096624|ref|YP_001102285.1| recombination protein F [Saccharopolyspora erythraea NRRL 2338] gi|291005722|ref|ZP_06563695.1| recombination protein F [Saccharopolyspora erythraea NRRL 2338] gi|166221860|sp|A4F5N5|RECF_SACEN RecName: Full=DNA replication and repair protein recF gi|133909247|emb|CAL99359.1| DNA replication and repair protein [Saccharopolyspora erythraea NRRL 2338] Length = 391 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 27 FKLLDIEISHFRG--FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++++ FR ++ F T++ G NG GK++L EA+ ++ + R Sbjct: 1 MYVRHLQVTDFRSWPHADLT---FEPGPTVLVGSNGQGKTNLVEALGYVATLGSHRVATD 57 Query: 85 DSIKKRSIK 93 + + + Sbjct: 58 APLVRYGTQ 66 >gi|114576261|ref|XP_001136387.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform 7 [Pan troglodytes] gi|114576265|ref|XP_001136300.1| PREDICTED: SMC6 protein isoform 6 [Pan troglodytes] gi|114576267|ref|XP_001136212.1| PREDICTED: SMC6 protein isoform 5 [Pan troglodytes] gi|114576271|ref|XP_001136059.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform 3 [Pan troglodytes] gi|114576273|ref|XP_001136130.1| PREDICTED: SMC6 protein isoform 4 [Pan troglodytes] Length = 1091 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 48 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 107 >gi|13375848|ref|NP_078900.1| structural maintenance of chromosomes protein 6 [Homo sapiens] gi|214010216|ref|NP_001135758.1| structural maintenance of chromosomes protein 6 [Homo sapiens] gi|122070455|sp|Q96SB8|SMC6_HUMAN RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=hSMC6 gi|12052726|emb|CAB66479.1| hypothetical protein [Homo sapiens] gi|24980982|gb|AAH39828.1| Structural maintenance of chromosomes 6 [Homo sapiens] gi|52545748|emb|CAH56327.1| hypothetical protein [Homo sapiens] gi|62630105|gb|AAX88851.1| unknown [Homo sapiens] gi|117646594|emb|CAL37412.1| hypothetical protein [synthetic construct] gi|119621271|gb|EAX00866.1| SMC6 structural maintenance of chromosomes 6-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|119621272|gb|EAX00867.1| SMC6 structural maintenance of chromosomes 6-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|119621273|gb|EAX00868.1| SMC6 structural maintenance of chromosomes 6-like 1 (yeast), isoform CRA_a [Homo sapiens] gi|158258274|dbj|BAF85110.1| unnamed protein product [Homo sapiens] gi|208965582|dbj|BAG72805.1| protein for structural maintenance of chromosomes 6 [synthetic construct] Length = 1091 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 48 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 107 >gi|297668145|ref|XP_002812313.1| PREDICTED: structural maintenance of chromosomes protein 6-like isoform 1 [Pongo abelii] gi|297668147|ref|XP_002812314.1| PREDICTED: structural maintenance of chromosomes protein 6-like isoform 2 [Pongo abelii] gi|297668149|ref|XP_002812315.1| PREDICTED: structural maintenance of chromosomes protein 6-like isoform 3 [Pongo abelii] Length = 1091 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 48 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 107 >gi|167855650|ref|ZP_02478408.1| recombination protein F [Haemophilus parasuis 29755] gi|167853222|gb|EDS24478.1| recombination protein F [Haemophilus parasuis 29755] Length = 361 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I++FR T +E G NG GK+SL EAI +L +G + + + Sbjct: 1 MSLSRLIINNFRNLTA-VDLELNHGFNFFIGANGSGKTSLLEAIFYLGHGKSFKSHISNR 59 Query: 87 IKKRSIK 93 I K + + Sbjct: 60 IIKYNQE 66 >gi|323487684|ref|ZP_08092942.1| hypothetical protein GPDM_00015 [Planococcus donghaensis MPA1U2] gi|323398418|gb|EGA91206.1| hypothetical protein GPDM_00015 [Planococcus donghaensis MPA1U2] Length = 370 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ ++R + E ++EF+ + + G+N GK+++ E++ L + R + Sbjct: 1 MRIDRLELVNYRNY-ESLELEFSPEINVFIGENAQGKTNVMESLYVLSMAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|302840259|ref|XP_002951685.1| hypothetical protein VOLCADRAFT_105201 [Volvox carteri f. nagariensis] gi|300262933|gb|EFJ47136.1| hypothetical protein VOLCADRAFT_105201 [Volvox carteri f. nagariensis] Length = 1241 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 28 KLLDIEISHFRGFT-EIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 +L I + F+ F + + +L + G NG GKS+L EA+ + Sbjct: 17 QLSSIRVRGFKSFGPSWVTVPLPNTNLVGILGPNGSGKSNLLEAVLFAVG 66 >gi|296329389|ref|ZP_06871889.1| ATPase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153509|gb|EFG94327.1| ATPase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 923 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH---GD 85 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 5 IKKVQLENYRSHSNIT-VEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRSGKETGKS 63 Query: 86 SIKKRSIKTPMPMC 99 IK + + + Sbjct: 64 YIKFGEKSSKVDIN 77 >gi|289705898|ref|ZP_06502277.1| DNA replication and repair protein RecF [Micrococcus luteus SK58] gi|289557383|gb|EFD50695.1| DNA replication and repair protein RecF [Micrococcus luteus SK58] Length = 404 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + +E T++ G NG GK++L EAI +L + R Sbjct: 1 MYLSHLTVADFRSYR-WADLELTSGSTVLLGANGVGKTNLVEAIGYLGAQQSHRVSSDAQ 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LVRFGRDRAR 69 >gi|255743756|ref|ZP_05417714.1| hypothetical protein VCH_000050 [Vibrio cholera CIRS 101] gi|255738617|gb|EET94004.1| hypothetical protein VCH_000050 [Vibrio cholera CIRS 101] gi|259156270|gb|ACV96217.1| SMC domain protein [Vibrio cholerae Ban5] Length = 359 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + FRGF + + + + L ++ G NG GKSS EA+E+ G + Sbjct: 94 LKSISVGPFRGFAKEEILNLNNLLVLIYGPNGAGKSSFCEALEFGLLGAVEE 145 >gi|254478465|ref|ZP_05091842.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] gi|214035636|gb|EEB76333.1| RecF/RecN/SMC N terminal domain, putative [Carboxydibrachium pacificum DSM 12653] Length = 1177 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + ++IS FTE Q I F L + G G GKS++ +AI YG R Sbjct: 1 MKPIRLKISGLNSFTEEQVINFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|254393576|ref|ZP_05008709.1| RecF [Streptomyces clavuligerus ATCC 27064] gi|294813743|ref|ZP_06772386.1| DNA replication and repair protein recF [Streptomyces clavuligerus ATCC 27064] gi|326442164|ref|ZP_08216898.1| recombination protein F [Streptomyces clavuligerus ATCC 27064] gi|197707196|gb|EDY53008.1| RecF [Streptomyces clavuligerus ATCC 27064] gi|294326342|gb|EFG07985.1| DNA replication and repair protein recF [Streptomyces clavuligerus ATCC 27064] Length = 381 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++ ++ G NG GK++L EA+ +L + R Sbjct: 1 MHVTHLSLADFRSYA-RVEVPLGPGVSSFVGANGQGKTNLVEAVGYLATLASHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAQ 66 >gi|317499297|ref|ZP_07957570.1| DNA replication and repair protein RecF [Lachnospiraceae bacterium 5_1_63FAA] gi|316893466|gb|EFV15675.1| DNA replication and repair protein RecF [Lachnospiraceae bacterium 5_1_63FAA] Length = 113 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ ++R + + + FA ++ G N GK+++ E+I + R + Sbjct: 3 IKSLELKNYRNY-DELSMNFASGTNLLYGDNAQGKTNILESIYLSATTKSHRGNKDRELI 61 Query: 89 K 89 K Sbjct: 62 K 62 >gi|297622419|ref|YP_003703853.1| DNA replication and repair protein RecF [Truepera radiovictrix DSM 17093] gi|297163599|gb|ADI13310.1| DNA replication and repair protein RecF [Truepera radiovictrix DSM 17093] Length = 352 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL ++ ++R ++ F +T + G+N GKS+L EA+ G K ++ Sbjct: 1 MRLLSLQQLNYRNLNTP-RVTFGGGVTAIVGRNAAGKSNLLEAVYLGLTGELPHGKIAEA 59 Query: 87 IK 88 ++ Sbjct: 60 VR 61 >gi|167766861|ref|ZP_02438914.1| hypothetical protein CLOSS21_01378 [Clostridium sp. SS2/1] gi|167711409|gb|EDS21988.1| hypothetical protein CLOSS21_01378 [Clostridium sp. SS2/1] gi|291558401|emb|CBL37201.1| DNA replication and repair protein RecF [butyrate-producing bacterium SSC/2] Length = 361 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ ++R + + + FA ++ G N GK+++ E+I + R + Sbjct: 3 IKSLELKNYRNY-DELSMNFASGTNLLYGDNAQGKTNILESIYLSATTKSHRGNKDRELI 61 Query: 89 K 89 K Sbjct: 62 K 62 >gi|163790922|ref|ZP_02185345.1| recombination protein F [Carnobacterium sp. AT7] gi|159873764|gb|EDP67845.1| recombination protein F [Carnobacterium sp. AT7] Length = 373 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I +S++R + E ++ F+ + + G+N GK+SL EAI L + R + Sbjct: 1 MLLKEIHLSNYRNY-EHAEVIFSKGINVFLGENAQGKTSLMEAIYVLAMARSHRTANDKE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 TIRWDQD 66 >gi|257888092|ref|ZP_05667745.1| recombination protein F [Enterococcus faecium 1,141,733] gi|293379371|ref|ZP_06625515.1| DNA replication and repair protein RecF [Enterococcus faecium PC4.1] gi|257824146|gb|EEV51078.1| recombination protein F [Enterococcus faecium 1,141,733] gi|292641894|gb|EFF60060.1| DNA replication and repair protein RecF [Enterococcus faecium PC4.1] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|220930670|ref|YP_002507579.1| SMC domain protein [Clostridium cellulolyticum H10] gi|220000998|gb|ACL77599.1| SMC domain protein [Clostridium cellulolyticum H10] Length = 433 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + ++ ++ LTIV G+NG GK+S+ ++I W G R Sbjct: 4 IKINKLEIENVKRVKAVKIEPNSNGLTIVGGKNGQGKTSVIDSIAWALGGEKFR 57 >gi|108796985|ref|YP_637182.1| recombination protein F [Mycobacterium sp. MCS] gi|119866069|ref|YP_936021.1| recombination protein F [Mycobacterium sp. KMS] gi|123369971|sp|Q1BG58|RECF_MYCSS RecName: Full=DNA replication and repair protein recF gi|166220717|sp|A1U8S3|RECF_MYCSK RecName: Full=DNA replication and repair protein recF gi|108767404|gb|ABG06126.1| DNA replication and repair protein RecF [Mycobacterium sp. MCS] gi|119692158|gb|ABL89231.1| DNA replication and repair protein RecF [Mycobacterium sp. KMS] Length = 380 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MFVRHLTLTDFRSWA-RADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRVG 64 >gi|69246709|ref|ZP_00604077.1| RecF protein [Enterococcus faecium DO] gi|257881315|ref|ZP_05660968.1| recombination protein F [Enterococcus faecium 1,231,502] gi|257890532|ref|ZP_05670185.1| recombination protein F [Enterococcus faecium 1,231,410] gi|257893107|ref|ZP_05672760.1| recombination protein F [Enterococcus faecium 1,231,408] gi|258615267|ref|ZP_05713037.1| recombination protein F [Enterococcus faecium DO] gi|260558230|ref|ZP_05830426.1| RecF protein [Enterococcus faecium C68] gi|261206920|ref|ZP_05921609.1| RecF protein [Enterococcus faecium TC 6] gi|289566503|ref|ZP_06446927.1| DNA replication and repair protein recF [Enterococcus faecium D344SRF] gi|293563254|ref|ZP_06677706.1| DNA replication and repair protein RecF [Enterococcus faecium E1162] gi|293569156|ref|ZP_06680462.1| DNA replication and repair protein RecF [Enterococcus faecium E1071] gi|294616656|ref|ZP_06696427.1| DNA replication and repair protein RecF [Enterococcus faecium E1636] gi|294623762|ref|ZP_06702590.1| DNA replication and repair protein RecF [Enterococcus faecium U0317] gi|314940128|ref|ZP_07847308.1| recombination protein F [Enterococcus faecium TX0133a04] gi|314943041|ref|ZP_07849845.1| recombination protein F [Enterococcus faecium TX0133C] gi|314948159|ref|ZP_07851555.1| recombination protein F [Enterococcus faecium TX0082] gi|314953427|ref|ZP_07856345.1| recombination protein F [Enterococcus faecium TX0133A] gi|314993834|ref|ZP_07859170.1| recombination protein F [Enterococcus faecium TX0133B] gi|314998141|ref|ZP_07863023.1| recombination protein F [Enterococcus faecium TX0133a01] gi|68195123|gb|EAN09582.1| RecF protein [Enterococcus faecium DO] gi|257816973|gb|EEV44301.1| recombination protein F [Enterococcus faecium 1,231,502] gi|257826892|gb|EEV53518.1| recombination protein F [Enterococcus faecium 1,231,410] gi|257829486|gb|EEV56093.1| recombination protein F [Enterococcus faecium 1,231,408] gi|260075404|gb|EEW63710.1| RecF protein [Enterococcus faecium C68] gi|260078548|gb|EEW66250.1| RecF protein [Enterococcus faecium TC 6] gi|289161712|gb|EFD09588.1| DNA replication and repair protein recF [Enterococcus faecium D344SRF] gi|291588125|gb|EFF19967.1| DNA replication and repair protein RecF [Enterococcus faecium E1071] gi|291590476|gb|EFF22214.1| DNA replication and repair protein RecF [Enterococcus faecium E1636] gi|291596716|gb|EFF27939.1| DNA replication and repair protein RecF [Enterococcus faecium U0317] gi|291604793|gb|EFF34275.1| DNA replication and repair protein RecF [Enterococcus faecium E1162] gi|313587853|gb|EFR66698.1| recombination protein F [Enterococcus faecium TX0133a01] gi|313591725|gb|EFR70570.1| recombination protein F [Enterococcus faecium TX0133B] gi|313594530|gb|EFR73375.1| recombination protein F [Enterococcus faecium TX0133A] gi|313598241|gb|EFR77086.1| recombination protein F [Enterococcus faecium TX0133C] gi|313640633|gb|EFS05213.1| recombination protein F [Enterococcus faecium TX0133a04] gi|313645413|gb|EFS09993.1| recombination protein F [Enterococcus faecium TX0082] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHRTSSEQE 59 Query: 87 IKKRSIKTPM 96 + + M Sbjct: 60 LIGWTDDQAM 69 >gi|331085988|ref|ZP_08335071.1| hypothetical protein HMPREF0987_01374 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406911|gb|EGG86416.1| hypothetical protein HMPREF0987_01374 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 951 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG--YTQR 80 + + + ++ F + E I F L ++ G G GK+++ +AI + YG + Sbjct: 1 MRPITLTMNAFGTYLEETTIPFEQFGTSGLVLITGDTGAGKTTIFDAISYALYGETSSGN 60 Query: 81 RKHGDSIKKRSI 92 ++ + + Sbjct: 61 KRRKPEMLRSDY 72 >gi|156563996|ref|YP_001429735.1| DNA repair exo subunit 2 [Bacillus phage 0305phi8-36] gi|154622693|gb|ABS83573.1| DNA repair exo subunit 2 [Bacillus phage 0305phi8-36] Length = 769 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 L Y + L +E+++F+ + +++F+D L + G + GKS++ A+ W+FY Sbjct: 327 LDGYIEKAKAIGLAWVEVTNFQSH-KKTRVDFSDKGLNAITGASDSGKSAIIRALRWVFY 385 >gi|114601589|ref|XP_517922.2| PREDICTED: RAD50 homolog isoform 2 [Pan troglodytes] Length = 1219 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|15836608|ref|NP_297296.1| recombination protein F [Xylella fastidiosa 9a5c] gi|13959493|sp|Q9PHE1|RECF_XYLFA RecName: Full=DNA replication and repair protein recF gi|9104763|gb|AAF82816.1|AE003855_3 DNA replication and repair RecF protein [Xylella fastidiosa 9a5c] Length = 364 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + HFR F + L G+NG GK+SL EA+ + YG + R + D Sbjct: 1 MHITQLVLRHFRCFDAVDFFPL-PGLNFFIGENGSGKTSLLEAVHLMGYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRHGSE 66 >gi|313892259|ref|ZP_07825852.1| exonuclease SbcCD, C subunit [Dialister microaerophilus UPII 345-E] gi|313119397|gb|EFR42596.1| exonuclease SbcCD, C subunit [Dialister microaerophilus UPII 345-E] Length = 883 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +++ F + + Q+++F L ++ GQ G GK+++ +A+ + YG T Sbjct: 1 MKPIRLKMCAFGPYADEQELDFTLLGNQKLFLICGQTGAGKTTILDAMCYALYGKTGGGL 60 Query: 83 HGDSIKKRSI-----KTPMPMCMAV 102 + S +T + A+ Sbjct: 61 RNGETMRSSYADLDTETKVEFDFAI 85 >gi|294619748|ref|ZP_06699153.1| DNA replication and repair protein RecF [Enterococcus faecium E1679] gi|291594018|gb|EFF25487.1| DNA replication and repair protein RecF [Enterococcus faecium E1679] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|227550643|ref|ZP_03980692.1| recombination protein F [Enterococcus faecium TX1330] gi|257896290|ref|ZP_05675943.1| recombination protein F [Enterococcus faecium Com12] gi|227180222|gb|EEI61194.1| recombination protein F [Enterococcus faecium TX1330] gi|257832855|gb|EEV59276.1| recombination protein F [Enterococcus faecium Com12] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|160895284|ref|ZP_02076055.1| hypothetical protein CLOL250_02843 [Clostridium sp. L2-50] gi|156862977|gb|EDO56408.1| hypothetical protein CLOL250_02843 [Clostridium sp. L2-50] Length = 1004 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 10/83 (12%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + L + + F + E +I+F L +++G G GK+++ + I + YG T Sbjct: 3 MMRPLVLTMEAFGTYIEKTEIDFRKFGKQGLFLISGDTGSGKTTIFDGIMYALYGETSAG 62 Query: 82 ------KHGDSIKKRSIKTPMPM 98 + + P + Sbjct: 63 SGKNNTGRNGEMLRSDFADPKQL 85 >gi|194477068|ref|YP_002049247.1| putative DNA repair and genetic recombination protein RecF [Paulinella chromatophora] gi|171192075|gb|ACB43037.1| putative DNA repair and genetic recombination protein RecF [Paulinella chromatophora] Length = 390 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E+ FR ++ Q+++ ++ G NG GKS+L EA+E L ++ R K+ Sbjct: 20 IRLHRLELKQFRNYS-YQELQLETPRLLLIGNNGEGKSNLLEAVELLGSLHSNRCKNDHD 78 Query: 87 IKKRSIKT 94 + ++ + Sbjct: 79 LIRQGHSS 86 >gi|126660524|ref|ZP_01731630.1| hypothetical protein CY0110_02502 [Cyanothece sp. CCY0110] gi|126618167|gb|EAZ88930.1| hypothetical protein CY0110_02502 [Cyanothece sp. CCY0110] Length = 351 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + E ++F H + G NG GKSSL EAI W +G ++ D I Sbjct: 4 LQLTLKNFLSYRE-TVLDFRGLHTACICGANGAGKSSLLEAITWAIWGKSRTASDEDII 61 >gi|325662193|ref|ZP_08150808.1| hypothetical protein HMPREF0490_01546 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471445|gb|EGC74666.1| hypothetical protein HMPREF0490_01546 [Lachnospiraceae bacterium 4_1_37FAA] Length = 951 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG--YTQR 80 + + + ++ F + E I F L ++ G G GK+++ +AI + YG + Sbjct: 1 MRPITLTMNAFGTYLEETTIPFEQFGTSGLVLITGDTGAGKTTIFDAISYALYGETSSGN 60 Query: 81 RKHGDSIKKRSI 92 ++ + + Sbjct: 61 KRRKPEMLRSDY 72 >gi|254292403|ref|YP_003058426.1| SMC domain protein [Hirschia baltica ATCC 49814] gi|254040934|gb|ACT57729.1| SMC domain protein [Hirschia baltica ATCC 49814] Length = 1022 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F F + I F L + G G GK+S+ + + + +G + + Sbjct: 1 MRPIRLTLQAFGPFAGKEVINFEQTFDVGLFGIYGPTGAGKTSIFDGLCFALFGQSSGAQ 60 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 D RS P+ M V Sbjct: 61 R-DGKDFRSDHAPLDMLTEV 79 >gi|241763005|ref|ZP_04761067.1| SMC domain protein [Acidovorax delafieldii 2AN] gi|241367957|gb|EER62176.1| SMC domain protein [Acidovorax delafieldii 2AN] Length = 674 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQ---KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +FR F IEF + +T + G+N GK+++ +AI Sbjct: 1 MFLSQLTIKNFRQFGAADPLFSIEFREGVTALVGENDAGKTAVIDAIRHALTT 53 >gi|225016756|ref|ZP_03705948.1| hypothetical protein CLOSTMETH_00668 [Clostridium methylpentosum DSM 5476] gi|224950424|gb|EEG31633.1| hypothetical protein CLOSTMETH_00668 [Clostridium methylpentosum DSM 5476] Length = 376 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + + +FR +I + ++ GQN GK++L EAI WLF G R + DS Sbjct: 1 MKITEFKAHNFRNLQDIVLTP-DPGINLIYGQNAQGKTNLIEAI-WLFSGEKSFRGNKDS 58 >gi|315121983|ref|YP_004062472.1| recombination protein F [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495385|gb|ADR51984.1| recombination protein F [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 375 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + +S FR + + ++ F TI G NG GK+++ EAI L G RR Sbjct: 5 IKIKRLNVSEFRNYVSL-RLVFDSQQTIFVGDNGAGKTNILEAISLLSPGRGLRRASYSD 63 Query: 87 IKKRSI 92 + + Sbjct: 64 VTRIGS 69 >gi|302335014|ref|YP_003800221.1| hypothetical protein Olsu_0209 [Olsenella uli DSM 7084] gi|301318854|gb|ADK67341.1| conserved hypothetical protein [Olsenella uli DSM 7084] Length = 520 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ +EI++FRG+ ++ D LT+ G+N GKSS+ EA+ Sbjct: 1 MKIRSVEITNFRGYASETEVA-MDDLTVFVGKNDIGKSSVLEAL 43 >gi|257899274|ref|ZP_05678927.1| recombination protein F [Enterococcus faecium Com15] gi|293572721|ref|ZP_06683685.1| DNA replication and repair protein RecF [Enterococcus faecium E980] gi|257837186|gb|EEV62260.1| recombination protein F [Enterococcus faecium Com15] gi|291607213|gb|EFF36571.1| DNA replication and repair protein RecF [Enterococcus faecium E980] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|257885590|ref|ZP_05665243.1| recombination protein F [Enterococcus faecium 1,231,501] gi|257821446|gb|EEV48576.1| recombination protein F [Enterococcus faecium 1,231,501] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|257878649|ref|ZP_05658302.1| recombination protein F [Enterococcus faecium 1,230,933] gi|257812877|gb|EEV41635.1| recombination protein F [Enterococcus faecium 1,230,933] Length = 374 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ IEF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELN-IEFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|239630808|ref|ZP_04673839.1| DNA replication and repair protein recF [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527091|gb|EEQ66092.1| DNA replication and repair protein recF [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 371 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G N GK++L E+I L + R + Sbjct: 1 MKLDHLVLKNYRNYAAVDT-TFSPEINVLIGANAQGKTNLLESIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFGSE 66 >gi|221058216|ref|XP_002261616.1| DNA repair protein RAD50 [Plasmodium knowlesi strain H] gi|194247621|emb|CAQ41021.1| DNA repair protein RAD50, putative [Plasmodium knowlesi strain H] Length = 1804 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I R + + Q++EFA +T++ G NG GKS++ E ++ G Sbjct: 4 LEKIGIQGIRSYGDEEAQELEFASPITVIYGNNGSGKSTIIECLKVSCTG 53 >gi|191636828|ref|YP_001985994.1| recombination protein F [Lactobacillus casei BL23] gi|301065130|ref|YP_003787153.1| recombinational DNA repair ATPase [Lactobacillus casei str. Zhang] gi|226737807|sp|B3W6Q9|RECF_LACCB RecName: Full=DNA replication and repair protein recF gi|190711130|emb|CAQ65136.1| DNA replication and repair protein recF [Lactobacillus casei BL23] gi|300437537|gb|ADK17303.1| Recombinational DNA repair ATPase (RecF pathway) [Lactobacillus casei str. Zhang] gi|327380866|gb|AEA52342.1| DNA replication and repair protein recF [Lactobacillus casei LC2W] gi|327384031|gb|AEA55505.1| DNA replication and repair protein recF [Lactobacillus casei BD-II] Length = 371 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G N GK++L E+I L + R + Sbjct: 1 MKLDHLVLKNYRNYAAVDT-TFSPEINVLIGANAQGKTNLLESIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFGSE 66 >gi|188589811|ref|YP_001922117.1| exonuclease SbcC [Clostridium botulinum E3 str. Alaska E43] gi|188500092|gb|ACD53228.1| exonuclease SbcCD, C subunit [Clostridium botulinum E3 str. Alaska E43] Length = 1180 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ + F E QKI+F + G G GKS++ + I YG R+ Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFNKLTERGFFGIFGPTGSGKSTILDGITLALYGQVSRK 59 >gi|169351629|ref|ZP_02868567.1| hypothetical protein CLOSPI_02410 [Clostridium spiroforme DSM 1552] gi|169291851|gb|EDS73984.1| hypothetical protein CLOSPI_02410 [Clostridium spiroforme DSM 1552] Length = 365 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + +FR ++ I+F+ + I+ G NG GK++L EAI L G + R Sbjct: 3 VKSLNLYNFRNYSHFV-IDFSQDINILIGNNGQGKTNLIEAIYLLSVGKSFRS 54 >gi|53712444|ref|YP_098436.1| hypothetical protein BF1152 [Bacteroides fragilis YCH46] gi|52215309|dbj|BAD47902.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 529 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + I +F+G + I F D + I+ G NG GKS+L EA+ Sbjct: 2 IERVIIENFKGI-KKADISFNDKINIIVGNNGIGKSTLIEAMALALG 47 >gi|121582858|ref|YP_973300.1| Fis family transcriptional regulator [Polaromonas naphthalenivorans CJ2] gi|120596120|gb|ABM39558.1| transcriptional regulator, Fis family [Polaromonas naphthalenivorans CJ2] Length = 645 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 KL + IS+F+ F I+F + +T + G NG GK+ + +A+ LF + RR Sbjct: 1 MKLTRLRISNFQSFGPVPTPIDF-EAMTFLLGPNGAGKTVVLQALARLFGFDPSLRRVRR 59 Query: 85 DS 86 Sbjct: 60 SD 61 >gi|116493578|ref|YP_805312.1| recombination protein F [Lactobacillus casei ATCC 334] gi|227533503|ref|ZP_03963552.1| recombination protein F [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122264959|sp|Q03D52|RECF_LACC3 RecName: Full=DNA replication and repair protein recF gi|116103728|gb|ABJ68870.1| DNA replication and repair protein RecF [Lactobacillus casei ATCC 334] gi|227188832|gb|EEI68899.1| recombination protein F [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 371 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + ++R + + F+ + ++ G N GK++L E+I L + R + Sbjct: 1 MKLDHLVLKNYRNYAAVDT-TFSPEINVLIGANAQGKTNLLESIYVLALARSHRTNNDKE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFGSE 66 >gi|327409680|ref|YP_004347100.1| putative ATPase [Lausannevirus] gi|326784854|gb|AEA06988.1| putative ATPase [Lausannevirus] Length = 778 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 27/50 (54%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++++ +FR F + L +++ +G GKS++ A+ W YG ++ Sbjct: 2 ELQLQNFRCFKNKEVALPEKGLVLLSAPSGSGKSTILNALLWALYGEIKK 51 >gi|300772718|ref|ZP_07082588.1| exonuclease SbcC subfamily [Sphingobacterium spiritivorum ATCC 33861] gi|300761021|gb|EFK57847.1| exonuclease SbcC subfamily [Sphingobacterium spiritivorum ATCC 33861] Length = 1012 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I + E Q+I+F L + G G GKSS+ EAI + YG T+R Sbjct: 6 LSIEGLYSYQEKQEIDFTKLTEAGLFGIFGNVGSGKSSILEAISFALYGNTER 58 >gi|73661313|ref|YP_300094.1| recombination protein F [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581562|sp|Q4A177|RECF_STAS1 RecName: Full=DNA replication and repair protein recF gi|72493828|dbj|BAE17149.1| DNA repair and genetic recombination protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 371 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E + + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLQNYRNY-ESISLNCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKT------------PMPMCMAVPRCKYQLK 110 + + MP+ M + + Q+K Sbjct: 60 LIRFDSDYAKIEGDLSYRYGEMPLTMYITKKGKQVK 95 >gi|315037234|ref|YP_004030802.1| recombination protein F [Lactobacillus amylovorus GRL 1112] gi|325955725|ref|YP_004286335.1| recombination protein F [Lactobacillus acidophilus 30SC] gi|312275367|gb|ADQ58007.1| recombination protein F [Lactobacillus amylovorus GRL 1112] gi|325332290|gb|ADZ06198.1| recombination protein F [Lactobacillus acidophilus 30SC] gi|327182553|gb|AEA31000.1| recombination protein F [Lactobacillus amylovorus GRL 1118] Length = 375 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR + ++F ++ I G+N GK++L EAI +L + R + Sbjct: 1 MYLDHFTVQNFRNL-KKLDVDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTNNDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|312142412|ref|YP_003993858.1| DNA replication and repair protein RecF [Halanaerobium sp. 'sapolanicus'] gi|311903063|gb|ADQ13504.1| DNA replication and repair protein RecF [Halanaerobium sp. 'sapolanicus'] Length = 373 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + +FR F + ++ +L I G NG GK++L EAI + + R Sbjct: 1 MHLKRVLCRNFRNF-DEIILDLNSNLNIFLGDNGQGKTNLLEAIYIMATTNSHRS 54 >gi|251777734|ref|ZP_04820654.1| exonuclease SbcCD, C subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082049|gb|EES47939.1| exonuclease SbcCD, C subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1180 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ + F E QKI+F + G G GKS++ + I YG R+ Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFTKLTERGFFGIFGPTGSGKSTILDGITLALYGQVSRK 59 >gi|33416654|gb|AAH56009.1| XCAP-C protein [Xenopus laevis] Length = 361 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|27881713|gb|AAH44679.1| XCAP-C protein [Xenopus laevis] Length = 361 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|19703857|ref|NP_603419.1| exonuclease SBCC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714015|gb|AAL94718.1| Exonuclease SBCC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 921 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHS-NTTVEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRTGK 56 >gi|15606308|ref|NP_213687.1| hypothetical protein aq_1006 [Aquifex aeolicus VF5] gi|18202107|sp|O67124|RAD50_AQUAE RecName: Full=Probable DNA double-strand break repair rad50 ATPase gi|2983515|gb|AAC07092.1| hypothetical protein aq_1006 [Aquifex aeolicus VF5] Length = 978 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L +E+ F + + Q I+F ++ G+ G GK+S+ +AI + YG R Sbjct: 1 MRPLKLEVKGFTVYKKPQVIDFTPLKFFVIQGKTGAGKTSIIDAITYALYGKVPRYGASV 60 Query: 86 SIKKRSIKTPMPMCMAV 102 + K + + +A+ Sbjct: 61 ATKYVLSRGEKELKVAL 77 >gi|302689731|ref|XP_003034545.1| hypothetical protein SCHCODRAFT_81772 [Schizophyllum commune H4-8] gi|300108240|gb|EFI99642.1| hypothetical protein SCHCODRAFT_81772 [Schizophyllum commune H4-8] Length = 1107 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+S F ++ F + + G NG GKS++ AI G T G +K Sbjct: 100 IEFIEMSQFMCH-KLLSFNFGPQINFIIGHNGSGKSAVLSAITVALGGKTASTGRGAGLK 158 >gi|297265476|ref|XP_002799197.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Macaca mulatta] Length = 977 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 49 IESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 108 >gi|114108152|gb|AAI22970.1| rad50 protein [Xenopus (Silurana) tropicalis] Length = 586 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTG 55 >gi|110677618|ref|YP_680625.1| recombination protein F [Roseobacter denitrificans OCh 114] gi|109453734|gb|ABG29939.1| DNA replication and repair protein RecF, putative [Roseobacter denitrificans OCh 114] Length = 366 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L D+ +SHFR + + + G NG GK+++ EA+ L G RR Sbjct: 1 MALHLTDLMVSHFRSHR-VARFALDQRPVALFGPNGAGKTNILEAVSLLSPGRGLRRASA 59 Query: 85 DSIKKR 90 + +R Sbjct: 60 QDMTRR 65 >gi|289669471|ref|ZP_06490546.1| ATPase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 411 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------F 74 ARK + ++ ++I +FR +++ + LT++ G NG GKS++ + +L Sbjct: 7 ARK-VARIEYLKIQNFRAIRDLELRDITP-LTVLLGPNGSGKSTVFDVFAFLAECFELGL 64 Query: 75 YGYTQRRKHGDSIKKRSIKTP 95 +R +K R + P Sbjct: 65 RRAWDKRGRAKELKTRGSEGP 85 >gi|289663885|ref|ZP_06485466.1| ATPase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 435 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------F 74 ARK + ++ ++I +FR +++ + LT++ G NG GKS++ + +L Sbjct: 31 ARK-VARIEYLKIQNFRAIRDLELRDITP-LTVLLGPNGSGKSTVFDVFAFLAECFELGL 88 Query: 75 YGYTQRRKHGDSIKKRSIKTP 95 +R +K R + P Sbjct: 89 RRAWDKRGRAKELKTRGSEGP 109 >gi|260170441|ref|ZP_05756853.1| hypothetical protein BacD2_01103 [Bacteroides sp. D2] gi|315918795|ref|ZP_07915035.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692670|gb|EFS29505.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 589 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I +FR +I+F ++ TI G N GK+S AI W G Sbjct: 1 MRINHVHIRNFRKLR-NCRIDFDENQTIFVGANNSGKTSAMSAIIWFLKG 49 >gi|228474213|ref|ZP_04058950.1| DNA replication and repair protein RecF [Staphylococcus hominis SK119] gi|228271908|gb|EEK13245.1| DNA replication and repair protein RecF [Staphylococcus hominis SK119] Length = 371 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E + + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EAVTLNCHPEVNILIGENAQGKTNLLESIYVLALAKSHRTANDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + + MP+ M + + Q+K Sbjct: 60 LIRFNSEYAKIEGELSYRHGTMPLTMYITKKGKQVK 95 >gi|206895150|ref|YP_002247528.1| RecF/RecN/SMC N domain, putative [Coprothermobacter proteolyticus DSM 5265] gi|206737767|gb|ACI16845.1| RecF/RecN/SMC N domain, putative [Coprothermobacter proteolyticus DSM 5265] Length = 342 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I++ +FR Q+IE D LT++ G+N GK+SL E++ + G + R ++ I Sbjct: 3 RVRSIKLYNFRNLL-NQEIEIPDGLTVLMGENMQGKTSLLESLFIVSTGRSFRTRNIGDI 61 Query: 88 KKRSIKT 94 + Sbjct: 62 VRWGENQ 68 >gi|170284923|gb|AAI61019.1| rad50 protein [Xenopus (Silurana) tropicalis] Length = 555 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F Q I+F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTG 55 >gi|158254626|dbj|BAF83286.1| unnamed protein product [Homo sapiens] Length = 615 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|12849495|dbj|BAB28365.1| unnamed protein product [Mus musculus] Length = 233 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|26990389|ref|NP_745814.1| hypothetical protein PP_3680 [Pseudomonas putida KT2440] gi|24985352|gb|AAN69278.1|AE016563_1 hypothetical protein PP_3680 [Pseudomonas putida KT2440] Length = 667 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 KL + IS F+ F +I I F D +T + G NG GK++ +A+ +F RR Sbjct: 25 MKLCSLRISGFQSFGQDITDITF-DGVTYLLGPNGAGKTATLQALARMFGFEPGLRRLRR 83 Query: 85 DSIKKRSIKTPMP 97 + +P Sbjct: 84 SDFHVPLNEQEVP 96 >gi|314934957|ref|ZP_07842316.1| DNA replication and repair protein RecF [Staphylococcus caprae C87] gi|313652887|gb|EFS16650.1| DNA replication and repair protein RecF [Staphylococcus caprae C87] Length = 371 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-EEVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|297562024|ref|YP_003680998.1| hypothetical protein Ndas_3083 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846472|gb|ADH68492.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 796 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++++ FRG ++ LT+V G NG GKSS +E IE G R Sbjct: 52 LSSVKVTGFRGIGGEAELNLPPGPGLTMVFGANGSGKSSFAEGIEAAVTGDNAR 105 >gi|170649702|gb|ACB21284.1| DNA repair protein RAD50 (predicted) [Callicebus moloch] Length = 1102 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|167038679|ref|YP_001661664.1| recombination protein F [Thermoanaerobacter sp. X514] gi|256751452|ref|ZP_05492330.1| DNA replication and repair protein RecF [Thermoanaerobacter ethanolicus CCSD1] gi|300913761|ref|ZP_07131078.1| DNA replication and repair protein RecF [Thermoanaerobacter sp. X561] gi|307723222|ref|YP_003902973.1| DNA replication and repair protein RecF [Thermoanaerobacter sp. X513] gi|226737847|sp|B0K0X1|RECF_THEPX RecName: Full=DNA replication and repair protein recF gi|166852919|gb|ABY91328.1| DNA replication and repair protein RecF [Thermoanaerobacter sp. X514] gi|256749671|gb|EEU62697.1| DNA replication and repair protein RecF [Thermoanaerobacter ethanolicus CCSD1] gi|300890446|gb|EFK85591.1| DNA replication and repair protein RecF [Thermoanaerobacter sp. X561] gi|307580283|gb|ADN53682.1| DNA replication and repair protein RecF [Thermoanaerobacter sp. X513] Length = 362 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + QKIEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-QKQKIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKTTE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIKFGED 66 >gi|281419667|ref|ZP_06250666.1| RecF protein [Prevotella copri DSM 18205] gi|281406196|gb|EFB36876.1| RecF protein [Prevotella copri DSM 18205] Length = 405 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Y +RK L +I I +F+ +E + + + G NG GK++ +AI +L + + Sbjct: 34 YKSRKETMILKNISIINFKNIKSAN-LELSPKINCLIGHNGMGKTNFLDAIYYLSFCRSA 92 Query: 80 RRKHGDSIK 88 I Sbjct: 93 YNSIDSQII 101 >gi|121582966|ref|YP_973408.1| SMC domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120596228|gb|ABM39666.1| SMC domain protein [Polaromonas naphthalenivorans CJ2] Length = 1041 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + I FR + + EF D + ++ NG GK+SL EAIE Sbjct: 197 LRKLSIQQFRRIHQSTEFEFGD-VNLITAPNGMGKTSLLEAIE 238 >gi|332826655|gb|EGJ99481.1| hypothetical protein HMPREF9455_04133 [Dysgonomonas gadei ATCC BAA-286] Length = 882 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I I G + +I+ + +LT + G G GKS+L EAI + R + Sbjct: 262 IKSISIEG--GLLDKVRIDLSSNLTCIIGGRGAGKSTLLEAIRECSGNKSNARVVDSDV 318 >gi|328871118|gb|EGG19489.1| DNA recombination/repair protein [Dictyostelium fasciculatum] Length = 1306 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I I R F E I+F LT++ G NG GK+++ E +++ G Sbjct: 4 VEKILIQGIRSFDYKEPSVIDFYKPLTLIVGVNGAGKTTIIECLKYASTG 53 >gi|303228584|ref|ZP_07315411.1| putative DNA replication and repair protein RecF [Veillonella atypica ACS-134-V-Col7a] gi|302516763|gb|EFL58678.1| putative DNA replication and repair protein RecF [Veillonella atypica ACS-134-V-Col7a] Length = 366 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + ++ ++ + ++ G NG GK+++ EAI G + R Sbjct: 1 MRINSLQLFQFRNYKDLT-LDLQPEIIVLYGTNGAGKTNILEAIYVGTIGKSHRTNDTSD 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|303230615|ref|ZP_07317365.1| putative DNA replication and repair protein RecF [Veillonella atypica ACS-049-V-Sch6] gi|302514670|gb|EFL56662.1| putative DNA replication and repair protein RecF [Veillonella atypica ACS-049-V-Sch6] Length = 366 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +++ FR + ++ ++ + ++ G NG GK+++ EAI G + R Sbjct: 1 MRINSLQLFQFRNYKDLT-LDLQPEIIVLYGTNGAGKTNILEAIYVGTIGKSHRTNDTSD 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|184185449|gb|ACC68855.1| RAD50 homolog isoform 1 (predicted) [Rhinolophus ferrumequinum] Length = 1312 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFTPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|169618920|ref|XP_001802873.1| hypothetical protein SNOG_12652 [Phaeosphaeria nodorum SN15] gi|111058830|gb|EAT79950.1| hypothetical protein SNOG_12652 [Phaeosphaeria nodorum SN15] Length = 1177 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +++++ I ++ + I + + + G NG GKS++ ++I ++ Sbjct: 1 MRIIELVIDGYKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGINNLSVVRAQ 60 Query: 86 SIKKRSIK 93 +++ K Sbjct: 61 NLQDLIYK 68 >gi|308070915|ref|YP_003872520.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] gi|305860194|gb|ADM71982.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] Length = 1030 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + ++ F F + + I+F++ L +V+G G GK+S+ +AI + YG Sbjct: 1 MKPLKLTMTAFGPFKDKEVIDFSELKGHRLFVVSGNTGAGKTSIFDAICFALYGDASGED 60 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 DS RS + AV Sbjct: 61 RNDSKMLRSHFADDQVHTAV 80 >gi|302342594|ref|YP_003807123.1| SMC domain protein [Desulfarculus baarsii DSM 2075] gi|301639207|gb|ADK84529.1| SMC domain protein [Desulfarculus baarsii DSM 2075] Length = 1015 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + + F F + Q+I+F ++ G G GK+++ +AI + YG + + Sbjct: 1 MRVERLCLEAFGPFIQRQEIDFSRLEGRSPFLIQGPTGAGKTTILDAICFALYGASSGGE 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 REARNLRC 68 >gi|297545260|ref|YP_003677562.1| SMC domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843035|gb|ADH61551.1| SMC domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 88 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E I FA I+ G+N GKS++ +AI+ + ++ Sbjct: 1 MYLHRVIIKNFRSI-EYIDITFAKGKNIIVGKNNCGKSNIIKAIDLVLGQSNPAYVKNEN 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|255530448|ref|YP_003090820.1| DNA replication and repair protein RecF [Pedobacter heparinus DSM 2366] gi|255343432|gb|ACU02758.1| DNA replication and repair protein RecF [Pedobacter heparinus DSM 2366] Length = 367 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +I + +F+ +T+ + F+ + G NG GK++L +AI +L Sbjct: 1 MWLKNITLLNFKNYTDAN-VSFSKTVNAFVGDNGAGKTNLLDAIHYL 46 >gi|226326918|ref|ZP_03802436.1| hypothetical protein PROPEN_00778 [Proteus penneri ATCC 35198] gi|225204755|gb|EEG87109.1| hypothetical protein PROPEN_00778 [Proteus penneri ATCC 35198] Length = 164 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I HFR E + AD + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRHFRNI-EQADLPLADGFNFLVGPNGSGKTSILEAIYTLGHGRAFRSSQANRVI 61 Query: 89 K 89 + Sbjct: 62 Q 62 >gi|148507995|gb|ABQ75795.1| chromosome segregation protein [uncultured haloarchaeon] Length = 1089 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 + +E+ + R + E Q I+F + +++G NG GK+SL + + R Sbjct: 1 MNIKKLELQNIRSY-EQQSIQFPEGTILIHGDNGAGKTSLVMGLFGGLFLSEIRNVGNNS 59 Query: 84 ---GDSIKKRSIKTPMPMCMAVPRCKYQLK 110 + +++ K + + V +Y+++ Sbjct: 60 FSLDEFVRRGGNKGTVELVFEVSGVEYEVE 89 >gi|319936687|ref|ZP_08011100.1| DNA replication and repair protein recF [Coprobacillus sp. 29_1] gi|319808244|gb|EFW04809.1| DNA replication and repair protein recF [Coprobacillus sp. 29_1] Length = 369 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ IE+ +FR + + ++FA + I G+N GK++L EAI Sbjct: 1 MKINHIELKNFRNYKD-CSVDFAPFINIFIGKNAQGKTNLLEAI 43 >gi|49256867|gb|AAH73850.1| RAD50 protein [Homo sapiens] gi|80473913|gb|AAI08283.1| RAD50 protein [Homo sapiens] Length = 723 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|237745024|ref|ZP_04575505.1| exonuclease SBCC [Fusobacterium sp. 7_1] gi|229432253|gb|EEO42465.1| exonuclease SBCC [Fusobacterium sp. 7_1] Length = 921 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHSNIT-VEFTKGINLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|241952833|ref|XP_002419138.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis CD36] gi|223642478|emb|CAX42727.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis CD36] Length = 1307 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + I+F LT++ GQNG GK+++ E +++ G G Sbjct: 4 IYKLSIKGIRAFHPESDETIQFGFPLTLICGQNGCGKTTVIECLKYATTGTLPPNSKG 61 >gi|167036435|ref|YP_001664013.1| recombination protein F [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320114861|ref|YP_004185020.1| DNA replication and repair protein RecF [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226737846|sp|B0KAG3|RECF_THEP3 RecName: Full=DNA replication and repair protein recF gi|166855269|gb|ABY93677.1| DNA replication and repair protein RecF [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319927952|gb|ADV78637.1| DNA replication and repair protein RecF [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 362 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + QKIEF + + I G N GKS+L E+I L G + R Sbjct: 1 MYVKELFVDNFRNL-QKQKIEFCEGINIFYGLNAQGKSNLLESIRLLSMGRSFRGSKTTE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIKFGED 66 >gi|160934645|ref|ZP_02082031.1| hypothetical protein CLOLEP_03518 [Clostridium leptum DSM 753] gi|156866098|gb|EDO59470.1| hypothetical protein CLOLEP_03518 [Clostridium leptum DSM 753] Length = 608 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ + + FR Q F D ++ + G NG GK++++ I + YG + Sbjct: 7 MKIKGVTFTDFRNHKAPQSYTFGD-ISYITGHNGTGKTTMAHGICYALYGVS 57 >gi|281211350|gb|EFA85515.1| DNA recombination/repair protein [Polysphondylium pallidum PN500] Length = 1301 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + R F E I+F LT++ G NG GK+++ E +++ G Sbjct: 4 IEKLLVQGIRSFDPNESSVIDFYKPLTLIVGVNGAGKTTIIECLKYASTG 53 >gi|269303216|gb|ACZ33316.1| DNA replication and repair protein RecF [Chlamydophila pneumoniae LPCoLN] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + K+ +++ +FR ++++ I A L + G+N GK++L EA+ L G + R +H Sbjct: 1 MFMKICSLKLKNFRNHSDLE-ISLAPKLNYIVGKNAQGKTNLLEALYVLSLGRSFRTQH 58 >gi|297588516|ref|ZP_06947159.1| DNA repair protein RecN [Finegoldia magna ATCC 53516] gi|297573889|gb|EFH92610.1| DNA repair protein RecN [Finegoldia magna ATCC 53516] Length = 565 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + ++F D L I+ G+ G GKS L EA E L +R + I+ Sbjct: 2 LNSLYIENF-AIIDKINVDFTDGLNIITGETGSGKSILIEAFELLLG----QRFNKSFIR 56 Query: 89 KRSIKT 94 S KT Sbjct: 57 DSSKKT 62 >gi|188995431|ref|YP_001929683.1| putative DNA replication and repair protein RecF [Porphyromonas gingivalis ATCC 33277] gi|226737817|sp|B2RL41|RECF_PORG3 RecName: Full=DNA replication and repair protein recF gi|188595111|dbj|BAG34086.1| putative DNA replication and repair protein RecF [Porphyromonas gingivalis ATCC 33277] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ I +F+ F+ + + G NG GK++L +A+ +L + + + + Sbjct: 3 IEELHIVNFKSIAA-ADCRFSPKVNCLVGNNGMGKTNLLDALHFLSFCRSHLSVPDNMVV 61 Query: 89 KRSIK 93 + + Sbjct: 62 RHGEE 66 >gi|139439855|ref|ZP_01773220.1| Hypothetical protein COLAER_02254 [Collinsella aerofaciens ATCC 25986] gi|133774783|gb|EBA38603.1| Hypothetical protein COLAER_02254 [Collinsella aerofaciens ATCC 25986] Length = 368 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + D+ ++H+R F + ++ + +TI+ G N GK++L EA++ L G + R Sbjct: 1 MTMFARDLSVAHYRSF-DSYRLALDEGVTILAGPNAAGKTNLIEALQLLTSGASFR 55 >gi|114107981|gb|AAI23313.1| Unknown (protein for IMAGE:8329210) [Xenopus laevis] Length = 417 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 136 >gi|37521412|ref|NP_924789.1| hypothetical protein gll1843 [Gloeobacter violaceus PCC 7421] gi|35212409|dbj|BAC89784.1| gll1843 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +L I + F+ I++++ + ++ G NG GKS+ + +L Sbjct: 1 MVELETITVKGFKSIASIEQLKLKP-INVIIGPNGSGKSNFIDVFTFL 47 >gi|34540225|ref|NP_904704.1| recF protein [Porphyromonas gingivalis W83] gi|51316314|sp|Q7MX24|RECF_PORGI RecName: Full=DNA replication and repair protein recF gi|34396537|gb|AAQ65603.1| recF protein [Porphyromonas gingivalis W83] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ I +F+ F+ + + G NG GK++L +A+ +L + + + + Sbjct: 3 IEELHIVNFKSIAA-ADCRFSPKVNCLVGNNGMGKTNLLDALHFLSFCRSHLSVPDNMVV 61 Query: 89 KRSIK 93 + + Sbjct: 62 RHGEE 66 >gi|303233458|ref|ZP_07320126.1| DNA replication and repair protein RecF [Atopobium vaginae PB189-T1-4] gi|302480466|gb|EFL43558.1| DNA replication and repair protein RecF [Atopobium vaginae PB189-T1-4] Length = 428 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++ +++ +EF+ TI+ G N GK+++ EAI G + + Sbjct: 31 LQQLQLYNWKNIASAT-LEFSPAATILYGPNAAGKTNIIEAIHQCTTGVSFK 81 >gi|294619480|ref|ZP_06698923.1| exonuclease SbcC [Enterococcus faecium E1679] gi|291594276|gb|EFF25707.1| exonuclease SbcC [Enterococcus faecium E1679] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|302409644|ref|XP_003002656.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102] gi|261358689|gb|EEY21117.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102] Length = 1195 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 28 KLLDIEISHFRGF---TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + + R F + + ++F LT++ G NG GK+++ E +++ G G Sbjct: 3 KIEKLSVQGIRSFGTGSGRETMQFFTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSKG 62 >gi|257899586|ref|ZP_05679239.1| exonuclease SbcC [Enterococcus faecium Com15] gi|257837498|gb|EEV62572.1| exonuclease SbcC [Enterococcus faecium Com15] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLKLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPEE 74 >gi|222149905|ref|YP_002550862.1| exonuclease protein [Agrobacterium vitis S4] gi|221736887|gb|ACM37850.1| exonuclease protein [Agrobacterium vitis S4] Length = 1024 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + Q I+F + L + GQ G GKS++ A+ + +G R + Sbjct: 1 MRPVRLVMQAFGPYAGRQSIDFREAVAAGLFGIYGQTGSGKSTIFSAMTFALFGEAARAE 60 Query: 83 HGDSIKKRSIKTP 95 + +P Sbjct: 61 QDTISLRSDHASP 73 >gi|166363921|ref|YP_001656194.1| hypothetical protein MAE_11800 [Microcystis aeruginosa NIES-843] gi|166086294|dbj|BAG01002.1| hypothetical protein MAE_11800 [Microcystis aeruginosa NIES-843] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + DIEIS+FR F E KIE + + ++ G+N GK++L EAI Y Y I+ Sbjct: 2 IKDIEISNFRCF-EHTKIEGFERVNLIGGKNNSGKTALLEAIF--LYSYPYPNTIHPYIR 58 Query: 89 KRSIKTPMPMCMAVPR 104 + + + AVP+ Sbjct: 59 GIIRRQSLAVVQAVPK 74 >gi|159026992|emb|CAO86712.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159028061|emb|CAO87138.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159028989|emb|CAO87450.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 255 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + DIEIS+FR F E KIE + + ++ G+N GK++L EAI Y Y I+ Sbjct: 2 IKDIEISNFRCF-EHTKIEGFERVNLIGGKNNSGKTALLEAIF--LYSYPYPNTIHPYIR 58 Query: 89 KRSIKTPMPMCMAVPR 104 + + + AVP+ Sbjct: 59 GIIRRQSLAVVQAVPK 74 >gi|153868967|ref|ZP_01998681.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152074461|gb|EDN71313.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 159 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ I + +FRGF E ++EF LT++ G+NG GK+++ + + L Sbjct: 13 IKVRKIILENFRGF-EQLELEFQSDLTVLIGENGAGKTTILDGLAKLL 59 >gi|312222395|emb|CBY02335.1| hypothetical protein [Leptosphaeria maculans] Length = 1502 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 37 FRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F+ + + +IE F+ ++ G+NG GKS+ A+ ++ Sbjct: 302 FKSYKDQMQIEPFSPKCNVIVGRNGSGKSNFFAAVRFVLG 341 >gi|294495715|ref|YP_003542208.1| ATP-dependent endonuclease [Methanohalophilus mahii DSM 5219] gi|292666714|gb|ADE36563.1| ATP-dependent endonuclease of the OLD family [Methanohalophilus mahii DSM 5219] Length = 685 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I I ++R E+ ++F ++ G+N GKS++ +AI+ L + Sbjct: 8 LYLSKIHIENYRSIKELD-LDFKKGKNVIVGKNNSGKSNIIKAIDLLLGEKS 58 >gi|261209237|ref|ZP_05923629.1| exonuclease SbcC [Enterococcus faecium TC 6] gi|289565986|ref|ZP_06446424.1| exonuclease SbcC [Enterococcus faecium D344SRF] gi|294616210|ref|ZP_06696007.1| exonuclease SbcC [Enterococcus faecium E1636] gi|260076783|gb|EEW64518.1| exonuclease SbcC [Enterococcus faecium TC 6] gi|289162184|gb|EFD10046.1| exonuclease SbcC [Enterococcus faecium D344SRF] gi|291590965|gb|EFF22677.1| exonuclease SbcC [Enterococcus faecium E1636] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|153940655|ref|YP_001389373.1| recombination protein F [Clostridium botulinum F str. Langeland] gi|166220705|sp|A7G9B3|RECF_CLOBL RecName: Full=DNA replication and repair protein recF gi|152936551|gb|ABS42049.1| DNA replication and repair protein RecF [Clostridium botulinum F str. Langeland] gi|295317480|gb|ADF97857.1| DNA replication and repair protein RecF [Clostridium botulinum F str. 230613] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|38511824|gb|AAH62603.1| RAD50 protein [Homo sapiens] Length = 557 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|76661227|ref|XP_587519.2| PREDICTED: SMC6 protein isoform 1 [Bos taurus] gi|297480590|ref|XP_002691521.1| PREDICTED: structural maintenance of chromosomes 6 [Bos taurus] gi|296482356|gb|DAA24471.1| structural maintenance of chromosomes 6 [Bos taurus] Length = 1092 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 49 IESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAITTNRGSSLK 108 >gi|71534101|gb|AAH99955.1| Smc6 protein [Mus musculus] Length = 757 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|74138157|dbj|BAE28576.1| unnamed protein product [Mus musculus] Length = 761 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|71005132|ref|XP_757232.1| hypothetical protein UM01085.1 [Ustilago maydis 521] gi|46096811|gb|EAK82044.1| hypothetical protein UM01085.1 [Ustilago maydis 521] Length = 1309 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I R F + I+F LT++ G NG GK+++ E +++ G G Sbjct: 4 LDKLAIRGVRSFDDKSINIIQFFHPLTVIVGYNGSGKTTIIECLKYATTGDLPPNTKG 61 >gi|289523809|ref|ZP_06440663.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502953|gb|EFD24117.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 894 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHG 84 +LL++++ + G E I F + G NG GKSS+ +++ +G R + Sbjct: 1 MRLLELKVRNILGLRE-AGINFDPGAVAIVGPNGAGKSSILDSLVLALFGSPTPVRVVNN 59 Query: 85 DSIKKRSIKTPMPMCMAV 102 ++ + +C V Sbjct: 60 LNVIRMGSSEGRVICTFV 77 >gi|257882163|ref|ZP_05661816.1| exonuclease SbcC [Enterococcus faecium 1,231,502] gi|257817821|gb|EEV45149.1| exonuclease SbcC [Enterococcus faecium 1,231,502] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|197286281|ref|YP_002152153.1| plasmid-related protein [Proteus mirabilis HI4320] gi|194683768|emb|CAR44814.1| putative plasmid-related protein [Proteus mirabilis HI4320] Length = 654 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 + I + +FR F E Q I LT + G NG GK+ L +A++ +F QR Sbjct: 1 MHIERINLQNFRSFGPEGQSIAVDPDLTTLVGANGAGKTVLMQALQRMFGISNEQRTIRR 60 Query: 85 DSIKKRSIKTPMP 97 S++ +P Sbjct: 61 QDFHIPSLEEEIP 73 >gi|69247671|ref|ZP_00604447.1| exonuclease SbcC [Enterococcus faecium DO] gi|257880308|ref|ZP_05659961.1| exonuclease SbcC [Enterococcus faecium 1,230,933] gi|257890967|ref|ZP_05670620.1| exonuclease SbcC [Enterococcus faecium 1,231,410] gi|257894222|ref|ZP_05673875.1| exonuclease SbcC [Enterococcus faecium 1,231,408] gi|258614744|ref|ZP_05712514.1| exonuclease SbcC [Enterococcus faecium DO] gi|260562388|ref|ZP_05832902.1| exonuclease SbcC [Enterococcus faecium C68] gi|293559938|ref|ZP_06676448.1| exonuclease SbcC [Enterococcus faecium E1162] gi|293568351|ref|ZP_06679674.1| exonuclease SbcC [Enterococcus faecium E1071] gi|294621011|ref|ZP_06700207.1| exonuclease SbcC [Enterococcus faecium U0317] gi|314937678|ref|ZP_07845003.1| exonuclease SbcC [Enterococcus faecium TX0133a04] gi|314940926|ref|ZP_07847832.1| exonuclease SbcC [Enterococcus faecium TX0133C] gi|314948053|ref|ZP_07851455.1| exonuclease SbcC [Enterococcus faecium TX0082] gi|314952332|ref|ZP_07855342.1| exonuclease SbcC [Enterococcus faecium TX0133A] gi|314991944|ref|ZP_07857399.1| exonuclease SbcC [Enterococcus faecium TX0133B] gi|314995202|ref|ZP_07860316.1| exonuclease SbcC [Enterococcus faecium TX0133a01] gi|68194743|gb|EAN09223.1| exonuclease SbcC [Enterococcus faecium DO] gi|257814536|gb|EEV43294.1| exonuclease SbcC [Enterococcus faecium 1,230,933] gi|257827327|gb|EEV53953.1| exonuclease SbcC [Enterococcus faecium 1,231,410] gi|257830601|gb|EEV57208.1| exonuclease SbcC [Enterococcus faecium 1,231,408] gi|260073312|gb|EEW61653.1| exonuclease SbcC [Enterococcus faecium C68] gi|291588960|gb|EFF20785.1| exonuclease SbcC [Enterococcus faecium E1071] gi|291599411|gb|EFF30432.1| exonuclease SbcC [Enterococcus faecium U0317] gi|291606103|gb|EFF35527.1| exonuclease SbcC [Enterococcus faecium E1162] gi|313590611|gb|EFR69456.1| exonuclease SbcC [Enterococcus faecium TX0133a01] gi|313593528|gb|EFR72373.1| exonuclease SbcC [Enterococcus faecium TX0133B] gi|313595547|gb|EFR74392.1| exonuclease SbcC [Enterococcus faecium TX0133A] gi|313600284|gb|EFR79127.1| exonuclease SbcC [Enterococcus faecium TX0133C] gi|313642951|gb|EFS07531.1| exonuclease SbcC [Enterococcus faecium TX0133a04] gi|313645469|gb|EFS10049.1| exonuclease SbcC [Enterococcus faecium TX0082] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|302392232|ref|YP_003828052.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] gi|302204309|gb|ADL12987.1| SMC domain protein [Acetohalobium arabaticum DSM 5501] Length = 485 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I I +F+ + ++ AD L ++ G + GK+++ A+ W+ Y GD Sbjct: 2 IEEIRIENFQSHKD-TVLKLADGLNLITGPSDSGKTAVIRALRWVLYNEPL----GDDFI 56 Query: 89 KRSIK 93 + + Sbjct: 57 RVGAR 61 >gi|301062719|ref|ZP_07203336.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300443199|gb|EFK07347.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 355 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I+I +F+ F + Q + + G NG GKSSL W Y TQ D Sbjct: 3 KISQIKIKNFKAFQQEQTFDLKAKNVLAYGNNGSGKSSL----FWALYTLTQSSIKTDD 57 >gi|187933859|ref|YP_001887176.1| exonuclease SbcC [Clostridium botulinum B str. Eklund 17B] gi|187722012|gb|ACD23233.1| exonuclease SbcCD, C subunit [Clostridium botulinum B str. Eklund 17B] Length = 1177 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ + F E QKI+F + G G GKS++ + I YG R+ Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFNKLTERGFFGIFGPTGSGKSTILDGITLALYGQVSRK 59 >gi|167756666|ref|ZP_02428793.1| hypothetical protein CLORAM_02204 [Clostridium ramosum DSM 1402] gi|167702841|gb|EDS17420.1| hypothetical protein CLORAM_02204 [Clostridium ramosum DSM 1402] Length = 1010 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 31 DIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +S F + ++ I+F D L ++ G G GK+ + +AI + YG + + Sbjct: 5 RLTMSAFGPYHQVVTIDFEPFIQDGLFLITGPTGAGKTMIFDAIMFALYGVSSGSERSSE 64 Query: 87 IKKRSI 92 + Sbjct: 65 QFRSDQ 70 >gi|256784491|ref|ZP_05522922.1| hypothetical protein SlivT_08383 [Streptomyces lividans TK24] gi|289768373|ref|ZP_06527751.1| DNA sulfur modification protein DndD [Streptomyces lividans TK24] gi|71149091|gb|AAZ29043.1| putative ATPase [Streptomyces lividans] gi|289698572|gb|EFD66001.1| DNA sulfur modification protein DndD [Streptomyces lividans TK24] Length = 663 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-- 80 L ++ + F + Q ++ + ++ G NG GK++L +AI+ + YG R Sbjct: 1 MHLHNLTLHDFGAYQGRQSLDLRVKPKRPIVLIGGLNGCGKTTLLDAIQLVLYGPRARCS 60 Query: 81 ----RKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 R + +++ + P A R ++ + Sbjct: 61 GRGNRSYDTYLRESINRAADPQRGAELRLEFSI 93 >gi|85372978|ref|YP_457040.1| hypothetical protein ELI_00755 [Erythrobacter litoralis HTCC2594] gi|84786061|gb|ABC62243.1| hypothetical protein ELI_00755 [Erythrobacter litoralis HTCC2594] Length = 110 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I +L + I +FR + E I+ ++LT + G+N GKS++ +A+ + + D Sbjct: 8 IVELAKVTIENFRCYREPISIDI-ENLTALVGRNDVGKSAIMDAL--AIFFEVAKLDRDD 64 Query: 86 SIK 88 + K Sbjct: 65 ACK 67 >gi|330994266|ref|ZP_08318194.1| DNA replication and repair protein recF [Gluconacetobacter sp. SXCC-1] gi|329758733|gb|EGG75249.1| DNA replication and repair protein recF [Gluconacetobacter sp. SXCC-1] Length = 374 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + + +T++ G NG GK++L EA+ L G R D + Sbjct: 4 VNRLVLTDFRNYRHL-SWRPQRAVTVITGPNGSGKTNLLEALSLLAPGRGLRGARMDELP 62 Query: 89 KRS 91 + Sbjct: 63 RHG 65 >gi|332139413|ref|YP_004425151.1| Recombinational DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549435|gb|AEA96153.1| Recombinational DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] Length = 362 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++I+ FR T + + LTI+ G+NG GKSSL EA+ +L +G + R S Sbjct: 1 MKLDRVQITQFRNLTS-VSLSPSPALTIIKGENGSGKSSLIEALYYLGFGRSFRTNKHSS 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 VIQNEKDS 67 >gi|293379103|ref|ZP_06625254.1| exonuclease SbcCD, C subunit [Enterococcus faecium PC4.1] gi|292642244|gb|EFF60403.1| exonuclease SbcCD, C subunit [Enterococcus faecium PC4.1] Length = 1041 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLKLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPEE 74 >gi|257888156|ref|ZP_05667809.1| exonuclease SbcC [Enterococcus faecium 1,141,733] gi|257824210|gb|EEV51142.1| exonuclease SbcC [Enterococcus faecium 1,141,733] Length = 1041 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLKLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPEE 74 >gi|209966327|ref|YP_002299242.1| recombination protein F [Rhodospirillum centenum SW] gi|209959793|gb|ACJ00430.1| DNA replication and repair protein RecF, putative [Rhodospirillum centenum SW] Length = 377 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + +++ ++ G NG GK++L EA+ +L G RR I+ Sbjct: 1 MTRLTVTRFRSYL-TARLDCDARPVVLTGPNGAGKTNLLEAVSFLAPGRGLRRARLAEIE 59 Query: 89 KRS 91 + Sbjct: 60 RTG 62 >gi|153933867|ref|YP_001382414.1| recombination protein F [Clostridium botulinum A str. ATCC 19397] gi|153935303|ref|YP_001385966.1| recombination protein F [Clostridium botulinum A str. Hall] gi|168181119|ref|ZP_02615783.1| DNA replication and repair protein RecF [Clostridium botulinum NCTC 2916] gi|226947226|ref|YP_002802317.1| DNA replication and repair protein RecF [Clostridium botulinum A2 str. Kyoto] gi|166220704|sp|A7FPF3|RECF_CLOB1 RecName: Full=DNA replication and repair protein recF gi|254790469|sp|C1FPH6|RECF_CLOBJ RecName: Full=DNA replication and repair protein recF gi|152929911|gb|ABS35411.1| DNA replication and repair protein RecF [Clostridium botulinum A str. ATCC 19397] gi|152931217|gb|ABS36716.1| DNA replication and repair protein RecF [Clostridium botulinum A str. Hall] gi|182668165|gb|EDT80144.1| DNA replication and repair protein RecF [Clostridium botulinum NCTC 2916] gi|226842327|gb|ACO84993.1| DNA replication and repair protein RecF [Clostridium botulinum A2 str. Kyoto] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|74189359|dbj|BAE22709.1| unnamed protein product [Mus musculus] Length = 767 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|293553055|ref|ZP_06673697.1| exonuclease SbcC [Enterococcus faecium E1039] gi|291602764|gb|EFF32974.1| exonuclease SbcC [Enterococcus faecium E1039] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|227552616|ref|ZP_03982665.1| exonuclease SbcC [Enterococcus faecium TX1330] gi|257896953|ref|ZP_05676606.1| exonuclease SbcC [Enterococcus faecium Com12] gi|227178242|gb|EEI59214.1| exonuclease SbcC [Enterococcus faecium TX1330] gi|257833518|gb|EEV59939.1| exonuclease SbcC [Enterococcus faecium Com12] Length = 1041 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLKLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPEE 74 >gi|168217580|ref|ZP_02643205.1| exonuclease SbcC [Clostridium perfringens NCTC 8239] gi|182380391|gb|EDT77870.1| exonuclease SbcC [Clostridium perfringens NCTC 8239] Length = 1172 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|91224589|ref|ZP_01259850.1| putative exonuclease SbcC [Vibrio alginolyticus 12G01] gi|91190477|gb|EAS76745.1| putative exonuclease SbcC [Vibrio alginolyticus 12G01] Length = 1018 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + F F + + I F ++ L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MKPIKLTMQAFGPFAKTEIIHFEKLGSNPLFLINGPTGSGKTSILDAICFALYGETTGNE 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 RQGIQMRC 68 >gi|300121231|emb|CBK21612.2| unnamed protein product [Blastocystis hominis] Length = 206 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + I R F E + I+F LTI+ G NG GK+++ E ++ Sbjct: 4 ISKMTIQGIRSFSPREEKTIKFLKPLTIIVGDNGCGKTTIIECLK 48 >gi|293391839|ref|ZP_06636173.1| DNA replication and repair protein RecF [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952373|gb|EFE02492.1| DNA replication and repair protein RecF [Aggregatibacter actinomycetemcomitans D7S-1] Length = 358 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR +E + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLTVENFRNLQA-VDLELDHGFNFLVGNNGSGKTSLLEAIFYLGHGRSFKSAVSNR 59 Query: 87 IKKRSIKTP 95 + S P Sbjct: 60 VI--SYDQP 66 >gi|187777364|ref|ZP_02993837.1| hypothetical protein CLOSPO_00920 [Clostridium sporogenes ATCC 15579] gi|187774292|gb|EDU38094.1| hypothetical protein CLOSPO_00920 [Clostridium sporogenes ATCC 15579] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|171058649|ref|YP_001790998.1| hypothetical protein Lcho_1966 [Leptothrix cholodnii SP-6] gi|170776094|gb|ACB34233.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 424 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWL-------FYGYT 78 ++ +++ +FR + +EF D LT++ G NG GKS++ + +L Sbjct: 17 RIEYLKVQNFRALHD---VEFKDLTPLTVLLGPNGSGKSTVFDVFAFLAECFELGLRKAW 73 Query: 79 QRRKHGDSIKKRSIKTP 95 +R +K R + P Sbjct: 74 DKRGRAKELKTRGAEGP 90 >gi|169343101|ref|ZP_02864127.1| exonuclease SbcC [Clostridium perfringens C str. JGS1495] gi|169298739|gb|EDS80814.1| exonuclease SbcC [Clostridium perfringens C str. JGS1495] Length = 1172 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|167755162|ref|ZP_02427289.1| hypothetical protein CLORAM_00667 [Clostridium ramosum DSM 1402] gi|237733415|ref|ZP_04563896.1| recombination protein F [Mollicutes bacterium D7] gi|167705212|gb|EDS19791.1| hypothetical protein CLORAM_00667 [Clostridium ramosum DSM 1402] gi|229383450|gb|EEO33541.1| recombination protein F [Coprobacillus sp. D7] Length = 365 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + +FR + IEF + I+ G NG GK++L EAI L G + + Sbjct: 1 MKVNSLCLDNFRNYNHFF-IEFDRDINILIGSNGQGKTNLIEAIYLLSVGKSFK 53 >gi|268557426|ref|XP_002636702.1| C. briggsae CBR-RAD-50 protein [Caenorhabditis briggsae] gi|187021025|emb|CAP39606.1| CBR-RAD-50 protein [Caenorhabditis briggsae AF16] Length = 1354 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 28 KLLDIEISHFRGFTEI----QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K ++ I R + QKI+F T+++G NG GK++ EA+ ++ G Sbjct: 62 KEEELHIRGIRSVGDEDHHVQKIDFLSPCTLISGPNGTGKTTTIEALNFITTGQ 115 >gi|116748375|ref|YP_845062.1| hypothetical protein Sfum_0931 [Syntrophobacter fumaroxidans MPOB] gi|116697439|gb|ABK16627.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB] Length = 385 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 AR + +IE+ ++R F ++ + G N GKS+ +A +L + Sbjct: 5 ARATAVRFTEIELKNWRNFGSVKVT--LPQRVFLVGPNASGKSNFLDAFRFLRDLASVGG 62 Query: 82 KHGDSIKKRS 91 ++++R Sbjct: 63 GFQAAVRRRG 72 >gi|308180321|ref|YP_003924449.1| hypothetical protein LPST_C1136 [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045812|gb|ADN98355.1| hypothetical protein LPST_C1136 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 826 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 1 MMQIKRLEIAGFGKF-QQQQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|254556352|ref|YP_003062769.1| hypothetical protein JDM1_1185 [Lactobacillus plantarum JDM1] gi|254045279|gb|ACT62072.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 826 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 1 MMQIKRLEIAGFGKF-QQQQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|217967435|ref|YP_002352941.1| DNA repair protein RecN [Dictyoglomus turgidum DSM 6724] gi|217336534|gb|ACK42327.1| DNA repair protein RecN [Dictyoglomus turgidum DSM 6724] Length = 580 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + + F + ++F D L ++ G+ G GKS L +A+ +L Sbjct: 2 LLALRVKDF-AIIDEITLDFHDGLNVITGETGAGKSLLVDALAFLLGERASTDIIRSGSN 60 Query: 89 KRSIKTPMPMCMAVPR 104 + ++ M V R Sbjct: 61 RSVVEAMFTMNEEVER 76 >gi|28378145|ref|NP_785037.1| hypothetical protein lp_1417 [Lactobacillus plantarum WCFS1] gi|28270980|emb|CAD63884.1| unknown [Lactobacillus plantarum WCFS1] Length = 826 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ +EI+ F F + Q+ EF D L ++ G N GKS++ I + +G+ RR Sbjct: 1 MMQIKRLEIAGFGKF-QQQQFEFGDGLQVIYGLNESGKSTMRAFILGMLFGFPSRR 55 >gi|116182584|ref|XP_001221141.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51] gi|88186217|gb|EAQ93685.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51] Length = 1282 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I R F + I F LT++ G NG GK+++ E +++ G G Sbjct: 3 RIEKLSILGVRSFGPQHQETIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|326383912|ref|ZP_08205596.1| recombination protein F [Gordonia neofelifaecis NRRL B-59395] gi|326197371|gb|EGD54561.1| recombination protein F [Gordonia neofelifaecis NRRL B-59395] Length = 405 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + FR + + + T+ G+NG+GK++L E++ ++ + R Sbjct: 1 MFVRELTLRDFRSWP-QARFTLSPGTTVFVGRNGFGKTNLLESLFYVATLRSHRVSSDAP 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LVRTGADAAR 69 >gi|325285177|ref|YP_004260967.1| DNA replication and repair protein recF [Cellulophaga lytica DSM 7489] gi|324320631|gb|ADY28096.1| DNA replication and repair protein recF [Cellulophaga lytica DSM 7489] Length = 359 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F + ++ +F + G NG GK+++ +AI L +G + Sbjct: 1 MLLKKLSLVNYKNF-DSKEFDFDAKINCFVGSNGVGKTNILDAIYHLSFGKS 51 >gi|255033715|ref|YP_003090159.1| hypothetical protein gp32 [Burkholderia phage KS9] gi|254832753|gb|ACT82996.1| hypothetical protein gp32 [Burkholderia phage KS9] Length = 434 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 R L L + + R F+E+ ++F + G NG GK+S+ AI F+ + Sbjct: 18 GRILKSTLESLHLRDVRQFSELN-VQFNAGFNFIAGPNGCGKTSILTAISHCFHYQS 73 >gi|294887375|ref|XP_002772078.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983] gi|239876016|gb|EER03894.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983] Length = 1328 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F+ + IEF +T++ G NG GK+++ E ++ G Sbjct: 4 LNKLGIQGIRSFSSERIEAIEFEKPVTLIVGHNGAGKTTVIECLKMATTG 53 >gi|295110039|emb|CBL23992.1| Predicted ATPase [Ruminococcus obeum A2-162] Length = 238 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + + F I+K+ F +T G+NG GKS+L EA+ + +G+ + + + Sbjct: 22 LKRIKAFKGIEKLVFNKPITFFVGENGSGKSTLLEALA-VAHGFNPEGGTKNYV-FSTHD 79 Query: 94 TPMPMCMAV 102 T +C A+ Sbjct: 80 THSELCDAI 88 >gi|257885355|ref|ZP_05665008.1| exonuclease SbcC [Enterococcus faecium 1,231,501] gi|257821211|gb|EEV48341.1| exonuclease SbcC [Enterococcus faecium 1,231,501] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPDE 74 >gi|170755060|ref|YP_001779630.1| recombination protein F [Clostridium botulinum B1 str. Okra] gi|226737780|sp|B1IDU6|RECF_CLOBK RecName: Full=DNA replication and repair protein recF gi|169120272|gb|ACA44108.1| DNA replication and repair protein RecF [Clostridium botulinum B1 str. Okra] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|154496130|ref|ZP_02034826.1| hypothetical protein BACCAP_00414 [Bacteroides capillosus ATCC 29799] gi|150274685|gb|EDN01749.1| hypothetical protein BACCAP_00414 [Bacteroides capillosus ATCC 29799] Length = 367 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + FR + ++ F+ + ++ G+N GK++L EAI +L ++R ++ + Sbjct: 3 VKSITLDFFRNYPHLET-AFSPDVNVICGENAQGKTNLLEAIGYLSTASSRRARYDRELI 61 Query: 89 KRSIK 93 + + Sbjct: 62 QFGVD 66 >gi|322804282|emb|CBZ01832.1| DNA recombination and repair protein RecF [Clostridium botulinum H04402 065] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|239993752|ref|ZP_04714276.1| Recombinational DNA repair ATPase [Alteromonas macleodii ATCC 27126] Length = 362 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++I+ FR T + + LTI+ G+NG GKSSL EA+ +L +G + R S Sbjct: 1 MKLDRVQITQFRNLTS-VSLSPSPALTIIKGENGSGKSSLIEALYYLGFGRSFRTNKHSS 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 VIQNEKDS 67 >gi|238917709|ref|YP_002931226.1| putative ATP-dependent endonuclease of the OLD family [Eubacterium eligens ATCC 27750] gi|238873069|gb|ACR72779.1| putative ATP-dependent endonuclease of the OLD family [Eubacterium eligens ATCC 27750] Length = 568 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R+ + ++I +F+ + + + I + L IV G N GKS++ EAI G Sbjct: 20 RRHRMFIRKVKIHNFKCYRDFE-ITLEEGLNIVVGDNEAGKSTILEAINLALTG 72 >gi|210634750|ref|ZP_03298278.1| hypothetical protein COLSTE_02205 [Collinsella stercoris DSM 13279] gi|210158690|gb|EEA89661.1| hypothetical protein COLSTE_02205 [Collinsella stercoris DSM 13279] Length = 361 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + +R F E + H+T++ G+N GK++L EA++ L G + R+ Sbjct: 1 MTIAATELSVVQYRSFAEYA-LRLDPHVTVLVGRNAVGKTNLVEALQLLTAGSSFRKPSS 59 Query: 85 DSIKKRS 91 + ++ Sbjct: 60 SELLRQG 66 >gi|294892698|ref|XP_002774189.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983] gi|239879406|gb|EER06005.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983] Length = 123 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F+ + IEF +T++ G NG GK+++ E ++ G Sbjct: 4 LNKLGIQGIRSFSSERIEAIEFEKPVTLIVGHNGAGKTTVIECLKMATTG 53 >gi|171915571|ref|ZP_02931041.1| ATPase [Verrucomicrobium spinosum DSM 4136] Length = 435 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +++ I+I +FRG + +EF T++ G NG GK+S+ A+ Sbjct: 1 MRIVSIQIDNFRGIKHLG-LEFDPRFTLLVGDNGSGKTSILSALSVALG 48 >gi|254304118|ref|ZP_04971476.1| possible ATP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324310|gb|EDK89560.1| possible ATP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 921 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH---GD 85 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHSNIT-VEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRSGKETGKS 61 Query: 86 SIKKRSIKTPMPM 98 IK + + + Sbjct: 62 YIKFGEKSSKVEI 74 >gi|89898370|ref|YP_515480.1| recombination protein F [Chlamydophila felis Fe/C-56] gi|123483260|sp|Q254F3|RECF_CHLFF RecName: Full=DNA replication and repair protein recF gi|89331742|dbj|BAE81335.1| DNA replication and repair protein [Chlamydophila felis Fe/C-56] Length = 367 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + +FR + E KI + ++ + G+N GK++L EA+ L G + R H Sbjct: 1 MNILSLRLKNFRNYKE-AKISLSPNMNYIFGENAQGKTNLLEALYVLSLGRSFRTSH 56 >gi|293571576|ref|ZP_06682598.1| exonuclease SbcC [Enterococcus faecium E980] gi|291608382|gb|EFF37682.1| exonuclease SbcC [Enterococcus faecium E980] Length = 1042 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +++ +F F ++F+ L +++G+ G GK+++ + I + +G T R Sbjct: 1 MKPKKLKLKNFGPFINET-VDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRL 59 Query: 83 HGDSIKKRSIKTPMP 97 + TP Sbjct: 60 RSGKEMRSLFATPEE 74 >gi|283768638|ref|ZP_06341550.1| putative recombination protein F [Bulleidia extructa W1219] gi|283105030|gb|EFC06402.1| putative recombination protein F [Bulleidia extructa W1219] Length = 359 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+SH+R + +Q + F +L ++ G+N GK++L EA+ +L + R + Sbjct: 1 MYIKSLELSHYRNYHHLQ-VSFQPYLNVIVGKNAQGKTNLIEALYYLSLCRSFRTNQDQA 59 Query: 87 IKKRSIK 93 + ++ K Sbjct: 60 LIQKEEK 66 >gi|300780156|ref|ZP_07090012.1| recombination protein F [Corynebacterium genitalium ATCC 33030] gi|300534266|gb|EFK55325.1| recombination protein F [Corynebacterium genitalium ATCC 33030] Length = 392 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + E+ + +T+ +G+NG+GK+++ EA + + R Sbjct: 1 MYLRELDLRDFRSWPELN-LALEPGVTVFSGRNGHGKTNIVEAAIYTATLASHRVSQDQP 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LIRTGANNAR 69 >gi|170764121|ref|ZP_02632584.2| exonuclease SbcC [Clostridium perfringens E str. JGS1987] gi|170661959|gb|EDT14642.1| exonuclease SbcC [Clostridium perfringens E str. JGS1987] Length = 1172 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|126668220|ref|ZP_01739181.1| recombination protein F [Marinobacter sp. ELB17] gi|126627369|gb|EAZ98005.1| recombination protein F [Marinobacter sp. ELB17] Length = 411 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ ++ HFR + F+ +++G NG GK+SL EAI +L G + R Sbjct: 1 MALITLQTEHFRNLAAKP-VTFSPAFNLIDGANGSGKTSLLEAIGYLGLGRSFR 53 >gi|186474004|ref|YP_001861346.1| putative GTP-binding protein [Burkholderia phymatum STM815] gi|184196336|gb|ACC74300.1| putative GTP-binding protein [Burkholderia phymatum STM815] Length = 878 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I I +FR T+ I+ L +++G N GKS+++EA+ +F Sbjct: 3 LESITIQNFRKLTDRIVIDGLESGLNLISGPNEAGKSTIAEAVRTVF 49 >gi|114762140|ref|ZP_01441608.1| recombination protein F [Pelagibaca bermudensis HTCC2601] gi|114545164|gb|EAU48167.1| recombination protein F [Roseovarius sp. HTCC2601] Length = 369 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +SHFR + +E + G NG GK++L EA+ L G RR Sbjct: 4 LHLSSLTLSHFRSH-KRAAVEVDARPVAIFGPNGAGKTNLIEAVSLLSPGRGMRRASAQE 62 Query: 87 IKKR 90 + +R Sbjct: 63 MTRR 66 >gi|3851586|gb|AAC72361.1| chromosome-associated protein-C [Homo sapiens] Length = 1202 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 35 SHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +F+ + + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 4 QNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 56 >gi|77458057|ref|YP_347562.1| hypothetical protein Pfl01_1830 [Pseudomonas fluorescens Pf0-1] gi|77382060|gb|ABA73573.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 955 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 29 LLDIEISHFRGFTE------IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + +FRGF E I F+ I NG GKSSL EAIE G + Sbjct: 85 LDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAPNGGGKSSLCEAIEICTTGDIKEAA 144 Query: 83 H 83 Sbjct: 145 R 145 >gi|28209864|ref|NP_780808.1| recombination protein F [Clostridium tetani E88] gi|28202299|gb|AAO34745.1| recFprotein [Clostridium tetani E88] Length = 370 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ IE ++ + G N GK+++ E+I + G + R Sbjct: 4 MYVKYLKLINFRNYKELN-IELDKNINVFIGNNAQGKTNVLESIYYASIGRSHRTSKDKE 62 Query: 87 IKK 89 + K Sbjct: 63 LIK 65 >gi|120596836|ref|YP_961410.1| recombination protein F [Shewanella sp. W3-18-1] gi|166221867|sp|A1RDX9|RECF_SHESW RecName: Full=DNA replication and repair protein recF gi|120556929|gb|ABM22856.1| DNA replication and repair protein RecF [Shewanella sp. W3-18-1] gi|319424420|gb|ADV52494.1| DNA replication and repair protein RecF [Shewanella putrefaciens 200] Length = 360 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q I A + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLNIEAFRNIQFAQLIP-APGINVIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|146291114|ref|YP_001181538.1| recombination protein F [Shewanella putrefaciens CN-32] gi|166221865|sp|A4Y1A6|RECF_SHEPC RecName: Full=DNA replication and repair protein recF gi|145562804|gb|ABP73739.1| DNA replication and repair protein RecF [Shewanella putrefaciens CN-32] Length = 360 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR Q I A + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLTRLNIEAFRNIQFAQLIP-APGINVIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|293374934|ref|ZP_06621231.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sanguinis PC909] gi|325837691|ref|ZP_08166497.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sp. HGF1] gi|292646453|gb|EFF64466.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sanguinis PC909] gi|325490872|gb|EGC93172.1| RecF/RecN/SMC N-terminal domain protein [Turicibacter sp. HGF1] Length = 248 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + H + ++ ++ F ++T G+NG GKS+L EAI + YG++ + + + Sbjct: 22 VRHIKALNQLNQLSFNHNITFFVGENGSGKSTLIEAIA-VAYGFSAEGGTRNY-NFSTYE 79 Query: 94 TPMPMCMAV 102 + + A+ Sbjct: 80 SHSELHKAI 88 >gi|228923834|ref|ZP_04087112.1| hypothetical protein bthur0011_48090 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835963|gb|EEM81326.1| hypothetical protein bthur0011_48090 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 198 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 27/56 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ + IS+FR F ++L+ + G N GK++L +A+ LF R Sbjct: 1 MQITKLTISNFRSFGPKSTKITLNNLSAIIGSNSSGKTTLIQALLKLFGQNQHERI 56 >gi|195159104|ref|XP_002020422.1| GL13523 [Drosophila persimilis] gi|194117191|gb|EDW39234.1| GL13523 [Drosophila persimilis] Length = 1038 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L+ ++ + + HF + E+ + +L ++ G NG GKS++ AI G Q Sbjct: 11 QLMGRIKSVYVKHFVSYKEVTYYP-SKYLNVLTGPNGSGKSTIVAAIMIGLGGEPQLLDR 69 Query: 84 GDSIKKRSIKTPMPMCMAV 102 S+ +AV Sbjct: 70 SASLSDYIQSGETEATIAV 88 >gi|160946607|ref|ZP_02093810.1| hypothetical protein PEPMIC_00565 [Parvimonas micra ATCC 33270] gi|158446991|gb|EDP23986.1| hypothetical protein PEPMIC_00565 [Parvimonas micra ATCC 33270] Length = 366 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +++FR +I EF +++ + G+NG GK+++ EAI + R+ + Sbjct: 3 VEKIHLTNFRNLKDI-SFEFKENINVFVGKNGIGKTNVLEAIYISLVASSFRQAKQEDFI 61 >gi|12848443|dbj|BAB27956.1| unnamed protein product [Mus musculus] gi|28981308|gb|AAH48790.1| Smc6 protein [Mus musculus] Length = 326 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|314935204|ref|ZP_07842557.1| DNA replication and repair protein RecF [Staphylococcus hominis subsp. hominis C80] gi|313656539|gb|EFS20278.1| DNA replication and repair protein RecF [Staphylococcus hominis subsp. hominis C80] Length = 371 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E + + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EAVTLNCHPEVNILIGENAQGKTNLLESIYVLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + + MP+ M + + Q+K Sbjct: 60 LIRFNSEYAKIEGELSYRHGTMPLTMYITKKGKQVK 95 >gi|193212746|ref|YP_001998699.1| SMC domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086223|gb|ACF11499.1| SMC domain protein [Chlorobaculum parvum NCIB 8327] Length = 1226 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + ++ +I+F AD + + G G GKS++ +AI YG T R Sbjct: 1 MKILTLRFANLNSLQGEWQIDFTRPEYVADGVFAITGPTGSGKSTILDAICLALYGETPR 60 >gi|163838773|ref|YP_001623178.1| recombination protein F [Renibacterium salmoninarum ATCC 33209] gi|189039634|sp|A9WR32|RECF_RENSM RecName: Full=DNA replication and repair protein recF gi|162952249|gb|ABY21764.1| DNA replication and repair protein [Renibacterium salmoninarum ATCC 33209] Length = 398 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + + + + + G NG GK++L EA+ +L + R Sbjct: 1 MYLEQLSLTDFRSY-QQADLGLEPGVNVFIGSNGLGKTNLVEALGYLASLSSHRVSQDGP 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIRFGAEQ 67 >gi|145296808|ref|YP_001139629.1| hypothetical protein cgR_2711 [Corynebacterium glutamicum R] gi|140846728|dbj|BAF55727.1| hypothetical protein [Corynebacterium glutamicum R] Length = 244 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 23/34 (67%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 FR E + ++F +T++ G+NG GKS+L EAI Sbjct: 27 FRVLREKRTLDFRAPITVITGENGVGKSTLLEAI 60 >gi|90019845|ref|YP_525672.1| ATPase [Saccharophagus degradans 2-40] gi|89949445|gb|ABD79460.1| ATP-dependent endonuclease of the OLD family [Saccharophagus degradans 2-40] Length = 666 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I I++FR F E D+ T+ G NG GK++ +A+ LF +++R Sbjct: 1 MKVEQISITNFRCFGRETTTFTLQDNSTVFIGSNGSGKTAAIQALSRLFGVTSKQR 56 >gi|51316445|sp|Q899S7|RECF_CLOTE RecName: Full=DNA replication and repair protein recF Length = 367 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +FR + E+ IE ++ + G N GK+++ E+I + G + R Sbjct: 1 MYVKYLKLINFRNYKELN-IELDKNINVFIGNNAQGKTNVLESIYYASIGRSHRTSKDKE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|148378015|ref|YP_001252556.1| DNA replication and repair protein RecF [Clostridium botulinum A str. ATCC 3502] gi|148287499|emb|CAL81558.1| DNA replication and repair protein [Clostridium botulinum A str. ATCC 3502] Length = 367 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 4 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 62 Query: 87 IKK 89 + K Sbjct: 63 LIK 65 >gi|119873433|ref|YP_931440.1| hypothetical protein Pisl_1950 [Pyrobaculum islandicum DSM 4184] gi|119674841|gb|ABL89097.1| hypothetical protein Pisl_1950 [Pyrobaculum islandicum DSM 4184] Length = 460 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + + + +F+ E++ +E + ++ G NG GKS++ EAI + Sbjct: 5 MYVFVRKVVVRNFKSIGELE-LELRPGVNLLVGPNGAGKSNVLEAIRFA 52 >gi|120401032|ref|YP_950861.1| recombination protein F [Mycobacterium vanbaalenii PYR-1] gi|166220720|sp|A1T105|RECF_MYCVP RecName: Full=DNA replication and repair protein recF gi|119953850|gb|ABM10855.1| DNA replication and repair protein RecF [Mycobacterium vanbaalenii PYR-1] Length = 386 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + ++E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLALTDFRSWA-RVELELEPGRTVFVGSNGFGKTNLIEALWYSATLGSHRVASDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRAGAE 66 >gi|74197310|dbj|BAC34200.2| unnamed protein product [Mus musculus] gi|74213748|dbj|BAC40087.2| unnamed protein product [Mus musculus] Length = 327 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|67921171|ref|ZP_00514690.1| SMC protein, N-terminal [Crocosphaera watsonii WH 8501] gi|67857288|gb|EAM52528.1| SMC protein, N-terminal [Crocosphaera watsonii WH 8501] Length = 1008 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + +I ++F H + G NG GKSSL EAI W+ +G ++ D I Sbjct: 4 LQLTLKNFLSYRDII-LDFRGLHTACICGANGAGKSSLLEAITWVIWGKSRTATDEDII 61 >gi|326422574|gb|EGD71969.1| hypothetical protein CSMARM5_0116 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 796 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L +I + + R + I KI+F++ + I+ G G GKSS+ ++E+ +G K + Sbjct: 3 LSEINLENIRSHS-ITKIKFSEGINIITGNTGSGKSSILMSVEYALFGKIGEGKDEGKM 60 >gi|238880625|gb|EEQ44263.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1332 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + I+F LT++ GQNG GK+++ E +++ G G Sbjct: 29 IYKLSIKGVRAFHPESDETIQFGFPLTLICGQNGCGKTTVIECLKYATTGTLPPNSKG 86 >gi|227509748|ref|ZP_03939797.1| exonuclease SbcC [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190672|gb|EEI70739.1| exonuclease SbcC [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 1045 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + E + I+F + +++G+ G GK+++ +A+ + YG + Sbjct: 1 MKPLKLTLKNFGPY-ENETIDFTKLDEASVFLISGKTGSGKTTIFDAMTFALYGDSASDD 59 Query: 83 HG-DSIKKRSIKTPMP 97 S++ T P Sbjct: 60 RTPQSMRSDFADTKAP 75 >gi|225076209|ref|ZP_03719408.1| hypothetical protein NEIFLAOT_01246 [Neisseria flavescens NRL30031/H210] gi|224952460|gb|EEG33669.1| hypothetical protein NEIFLAOT_01246 [Neisseria flavescens NRL30031/H210] Length = 105 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I++ +F+ + E + EF +L +V +NG+GK++L EAI Y Sbjct: 1 MYIKRIKLKNFKSYAEAE-FEFPPPEKGRNLILVGAENGHGKTTLLEAIYLCLY 53 >gi|68468331|ref|XP_721725.1| hypothetical protein CaO19.1648 [Candida albicans SC5314] gi|68468574|ref|XP_721606.1| hypothetical protein CaO19.9217 [Candida albicans SC5314] gi|46443529|gb|EAL02810.1| hypothetical protein CaO19.9217 [Candida albicans SC5314] gi|46443657|gb|EAL02937.1| hypothetical protein CaO19.1648 [Candida albicans SC5314] Length = 1332 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + I+F LT++ GQNG GK+++ E +++ G G Sbjct: 29 IYKLSIKGVRAFHPESDETIQFGFPLTLICGQNGCGKTTVIECLKYATTGTLPPNSKG 86 >gi|302541733|ref|ZP_07294075.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302459351|gb|EFL22444.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 536 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I ++R F E + ++F + I+ G N GKS++ EAIE G Sbjct: 2 LSKIVIHNYRTFREFE-LDFDPEMNILVGDNDAGKSTILEAIELGLTG 48 >gi|110803609|ref|YP_697540.1| exonuclease SbcC [Clostridium perfringens SM101] gi|110684110|gb|ABG87480.1| exonuclease SbcC [Clostridium perfringens SM101] Length = 1172 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|332976892|gb|EGK13714.1| SMC protein family protein [Desmospora sp. 8437] Length = 496 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + I +F+ E ++ F + L + G + GKS++ A+ W+ Y Sbjct: 3 RFERLLIENFQSH-EQTEVFFTEGLNVFVGPSDSGKSAILRALRWVLY 49 >gi|182625257|ref|ZP_02953032.1| exonuclease SbcC [Clostridium perfringens D str. JGS1721] gi|177909569|gb|EDT72009.1| exonuclease SbcC [Clostridium perfringens D str. JGS1721] Length = 1172 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIRLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|168183730|ref|ZP_02618394.1| DNA replication and repair protein RecF [Clostridium botulinum Bf] gi|237793324|ref|YP_002860876.1| recombination protein F [Clostridium botulinum Ba4 str. 657] gi|259563360|sp|C3KXR0|RECF_CLOB6 RecName: Full=DNA replication and repair protein recF gi|182673206|gb|EDT85167.1| DNA replication and repair protein RecF [Clostridium botulinum Bf] gi|229261280|gb|ACQ52313.1| DNA replication and repair protein RecF [Clostridium botulinum Ba4 str. 657] Length = 364 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKNVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|332530121|ref|ZP_08406070.1| AAA ATPase [Hylemonella gracilis ATCC 19624] gi|332040391|gb|EGI76768.1| AAA ATPase [Hylemonella gracilis ATCC 19624] Length = 81 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGDSI 87 L +EI +F+ F E Q+IE DH ++ G N GK+S +A+ W T DS Sbjct: 4 LHYLEIENFKRFGEKQRIEL-DHPAVLIGPNNCGKTSAIQALALWSQAVKTWFDVRKDST 62 Query: 88 KKRSIKT 94 K T Sbjct: 63 AKERTAT 69 >gi|167462694|ref|ZP_02327783.1| ATPase involved in DNA repair [Paenibacillus larvae subsp. larvae BRL-230010] Length = 510 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K + + +F+ +++ I F + LT + G+N GKSS+ EAI WLFY Sbjct: 3 IKFKTLFLHNFKSHRDLE-INFGE-LTKITGENTKGKSSILEAIPWLFY 49 >gi|256072122|ref|XP_002572386.1| DNA repair protein RAD50 [Schistosoma mansoni] gi|238657543|emb|CAZ28617.1| DNA repair protein RAD50, putative [Schistosoma mansoni] Length = 1282 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + KIEF +T++ GQNG GK+++ E +++ G Sbjct: 4 IERMSILGIRSFGQETSQKIEFFTPVTLILGQNGTGKTTVIECLKYSATG 53 >gi|110799531|ref|YP_694670.1| exonuclease SbcC [Clostridium perfringens ATCC 13124] gi|110674178|gb|ABG83165.1| exonuclease SbcC [Clostridium perfringens ATCC 13124] Length = 1172 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIRLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|49901446|gb|AAH76425.1| Im:6906849 protein [Danio rerio] Length = 409 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + Q I F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYITSG 55 >gi|58580161|ref|YP_199177.1| ATPase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622162|ref|YP_449534.1| hypothetical protein XOO_0505 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424755|gb|AAW73792.1| predicted ATPase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366102|dbj|BAE67260.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 411 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------F 74 ARK + ++ ++I +FR +++ + LT++ G NG GKS++ + +L Sbjct: 7 ARK-VARIEYLKIQNFRAIRDLELRDITP-LTVLLGPNGSGKSTVFDVFAFLAECFELGL 64 Query: 75 YGYTQRRKHGDSIKKRSIKTP 95 +R +K R + P Sbjct: 65 RRAWDKRGRARELKTRGSEGP 85 >gi|240172093|ref|ZP_04750752.1| recombination protein F [Mycobacterium kansasii ATCC 12478] Length = 388 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELHPGRTVFVGPNGFGKTNLIEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|20806787|ref|NP_621958.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] gi|20515249|gb|AAM23562.1| ATPase involved in DNA repair [Thermoanaerobacter tengcongensis MB4] Length = 1177 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + ++IS FTE Q I F L + G G GKS++ +AI YG R Sbjct: 1 MKPIRLKISGVNSFTEEQVINFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS 60 Query: 83 HG 84 Sbjct: 61 KD 62 >gi|255655061|ref|ZP_05400470.1| exonuclease subunit C [Clostridium difficile QCD-23m63] gi|296451048|ref|ZP_06892790.1| ATPase [Clostridium difficile NAP08] gi|296880599|ref|ZP_06904561.1| ATPase [Clostridium difficile NAP07] gi|296260055|gb|EFH06908.1| ATPase [Clostridium difficile NAP08] gi|296428553|gb|EFH14438.1| ATPase [Clostridium difficile NAP07] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 59 >gi|170763957|ref|ZP_02636213.2| exonuclease SbcC [Clostridium perfringens B str. ATCC 3626] gi|170711356|gb|EDT23538.1| exonuclease SbcC [Clostridium perfringens B str. ATCC 3626] Length = 1172 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIRLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|326670885|ref|XP_696859.4| PREDICTED: DNA repair protein RAD50 [Danio rerio] Length = 1312 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + Q I F LT++ G NG GK+++ E ++++ G Sbjct: 3 KIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYITSG 55 >gi|47219261|emb|CAG11723.1| unnamed protein product [Tetraodon nigroviridis] Length = 1335 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F ++Q I F LT++ G NG GK+++ E + + G Sbjct: 3 KIEKMSILGVRSFGIEDKDMQVISFFSPLTVLVGPNGAGKTTIIECLRYATSG 55 >gi|311899629|dbj|BAJ32037.1| hypothetical protein KSE_62740 [Kitasatospora setae KM-6054] Length = 1010 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + ++ F F ++I+F + L ++ G G GKSS+ +A+ + YG + Sbjct: 1 MRLHRLTVTAFGPFAGTERIDFDLLSSAGLFLLRGATGAGKSSVLDAVCYALYGELPGTR 60 Query: 83 HGDSIK 88 + ++ Sbjct: 61 RSNGVR 66 >gi|190402278|gb|ACE77687.1| DNA repair protein RAD50 (predicted) [Sorex araneus] Length = 513 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|302665218|ref|XP_003024221.1| hypothetical protein TRV_01571 [Trichophyton verrucosum HKI 0517] gi|291188268|gb|EFE43610.1| hypothetical protein TRV_01571 [Trichophyton verrucosum HKI 0517] Length = 1289 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Query: 22 ARKLIF-KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSS 65 AR++ KL+ +E+ +F+ + + F D T + G NG GKS+ Sbjct: 45 AREVAMGKLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSN 90 >gi|260682667|ref|YP_003213952.1| exonuclease subunit C [Clostridium difficile CD196] gi|260686266|ref|YP_003217399.1| exonuclease subunit C [Clostridium difficile R20291] gi|260208830|emb|CBA61750.1| exonuclease subunit C [Clostridium difficile CD196] gi|260212282|emb|CBE03033.1| exonuclease subunit C [Clostridium difficile R20291] Length = 1179 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 5 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 63 >gi|170764262|ref|ZP_02639686.2| exonuclease SbcC [Clostridium perfringens CPE str. F4969] gi|170714455|gb|EDT26637.1| exonuclease SbcC [Clostridium perfringens CPE str. F4969] Length = 1172 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 59 >gi|254974594|ref|ZP_05271066.1| exonuclease subunit C [Clostridium difficile QCD-66c26] gi|255091985|ref|ZP_05321463.1| exonuclease subunit C [Clostridium difficile CIP 107932] gi|255313719|ref|ZP_05355302.1| exonuclease subunit C [Clostridium difficile QCD-76w55] gi|255516401|ref|ZP_05384077.1| exonuclease subunit C [Clostridium difficile QCD-97b34] gi|255649500|ref|ZP_05396402.1| exonuclease subunit C [Clostridium difficile QCD-37x79] gi|306519632|ref|ZP_07405979.1| exonuclease subunit C [Clostridium difficile QCD-32g58] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 59 >gi|37528172|ref|NP_931517.1| hypothetical protein plu4344 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787609|emb|CAE16716.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1052 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEF-------ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K+ +EI F+ + E + +F + + NG+GK+S +AI++ Sbjct: 1 MKIKKVEIQAFKSYLEKKDGTFDFIHSTSGEPANFVSLFSPNGFGKTSFFDAIDFAITKK 60 Query: 78 TQRRKHGDSIKKRSIKTPMPMCM 100 R + ++K +++ + Sbjct: 61 ISRYVRNERLEKINLEESNQYNI 83 >gi|18309198|ref|NP_561132.1| exonuclease SbcC [Clostridium perfringens str. 13] gi|18143873|dbj|BAB79922.1| probable exonuclease [Clostridium perfringens str. 13] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +E+ F + Q +EF L + G G GKS++ + I YG R+ Sbjct: 4 MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARK 62 >gi|94312596|ref|YP_585805.1| dsDNA exonuclease SbcC [Cupriavidus metallidurans CH34] gi|93356448|gb|ABF10536.1| exonuclease dsDNA SbcC, ATP-dependent, C subunit [Cupriavidus metallidurans CH34] Length = 1017 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L +++ F F + I+F +++G G GK++L +AI + YG T + Sbjct: 1 MKPLYLKLQAFGPFAATETIDFTRLGDQAFFLIHGPTGAGKTTLLDAICFALYGDTSGGE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RSAQDMRSANADP 73 >gi|309774705|ref|ZP_07669729.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 3_1_53] gi|308917605|gb|EFP63321.1| DNA replication and repair protein RecF [Erysipelotrichaceae bacterium 3_1_53] Length = 174 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE +FR + K F + L I+ G+N GK++L + I F + + Sbjct: 2 IKSIEFKNFRNLS--CKFLFDNKLNIIVGKNNSGKTNLLDGIRLAFSTISGDYFRVEKSD 59 Query: 89 KRSIKTPMPMCMAV 102 + P+ + V Sbjct: 60 FLNSDDSKPITIKV 73 >gi|170759251|ref|YP_001785339.1| recombination protein F [Clostridium botulinum A3 str. Loch Maree] gi|226737781|sp|B1L1K9|RECF_CLOBM RecName: Full=DNA replication and repair protein recF gi|169406240|gb|ACA54651.1| DNA replication and repair protein RecF [Clostridium botulinum A3 str. Loch Maree] Length = 364 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR + + +E + + I G N GK+++ E+I + G + R Sbjct: 1 MYIKSVHLINFRNY-DDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKD 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|126698627|ref|YP_001087524.1| exonuclease subunit C [Clostridium difficile 630] gi|115250064|emb|CAJ67884.1| Nuclease SbcCD subunit C [Clostridium difficile] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 59 >gi|315640353|ref|ZP_07895469.1| recombination protein F [Enterococcus italicus DSM 15952] gi|315483889|gb|EFU74369.1| recombination protein F [Enterococcus italicus DSM 15952] Length = 373 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + HFR + + ++ FA L I G+N GK++L E+I L + R + Sbjct: 1 MRLNSLTLRHFRNY-DELQLPFAKDLIIFLGENAQGKTNLLESIYVLAMTRSHRTTNEQE 59 Query: 87 IKK 89 + + Sbjct: 60 LIE 62 >gi|256026771|ref|ZP_05440605.1| exonuclease SBCC [Fusobacterium sp. D11] Length = 231 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHSNIT-VEFTKGINLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|255262668|ref|ZP_05342010.1| DNA replication and repair protein RecF [Thalassiobium sp. R2A62] gi|255105003|gb|EET47677.1| DNA replication and repair protein RecF [Thalassiobium sp. R2A62] Length = 368 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ ISHFR + +E + G NG GK++L EAI L G RR + Sbjct: 4 LRLSELTISHFRSH-KRVALEIDARPVAIYGANGVGKTNLIEAISLLSPGRGLRRSSAED 62 Query: 87 IKKR 90 I +R Sbjct: 63 ITRR 66 >gi|255305969|ref|ZP_05350141.1| exonuclease subunit C [Clostridium difficile ATCC 43255] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 59 >gi|255100079|ref|ZP_05329056.1| exonuclease subunit C [Clostridium difficile QCD-63q42] Length = 1175 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E++ + + Q I+F L + G G GKS++ +AI YG R Sbjct: 1 MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRN 59 >gi|209693645|ref|YP_002261573.1| recombination protein F [Aliivibrio salmonicida LFI1238] gi|226737766|sp|B6EP48|RECF_ALISL RecName: Full=DNA replication and repair protein recF gi|208007596|emb|CAQ77696.1| DNA replication and repair protein RecF [Aliivibrio salmonicida LFI1238] Length = 359 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I+ FR E I+ + V G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIINDFRNI-ETCDIQLSTGFNFVIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGR 59 Query: 87 IKKRSIK 93 I + S Sbjct: 60 IIRNSCD 66 >gi|24415998|ref|NP_079971.2| structural maintenance of chromosomes protein 6 [Mus musculus] gi|81879970|sp|Q924W5|SMC6_MOUSE RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=mSMC6 gi|14250922|emb|CAC39250.1| SMC6 protein [Mus musculus] gi|60334826|gb|AAH90630.1| Structural maintenance of chromosomes 6 [Mus musculus] gi|148666017|gb|EDK98433.1| structural maintenance of chromosomes 6 [Mus musculus] Length = 1097 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|329965379|ref|ZP_08302303.1| conserved domain protein [Bacteroides fluxus YIT 12057] gi|328522171|gb|EGF49285.1| conserved domain protein [Bacteroides fluxus YIT 12057] Length = 445 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ ++ I +F+GF + + + F +LT+V G N GK++L +A++ Y Sbjct: 1 MRIKEVNIVNFKGF-QNETVTFNGNLTVVIGNNTAGKTTLLKALQVGLGAY 50 >gi|319954276|ref|YP_004165543.1| DNA replication and repair protein recf [Cellulophaga algicola DSM 14237] gi|319422936|gb|ADV50045.1| DNA replication and repair protein recF [Cellulophaga algicola DSM 14237] Length = 361 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F+ +F + GQNG GK+++ +AI L +G + Sbjct: 1 MFLKKLSLINYKNFSSEN-FDFDSKINCFVGQNGIGKTNILDAIYHLSFGKS 51 >gi|304440274|ref|ZP_07400164.1| DNA repair protein RecN [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371323|gb|EFM24939.1| DNA repair protein RecN [Peptoniphilus duerdenii ATCC BAA-1640] Length = 554 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL+++I +F + IEF D L I+ G+ G GKS + +A+ + G + Sbjct: 2 LLELKIQNF-AIIDDVTIEFTDGLNILTGETGSGKSIIIDALSTVLGGKAYKEM 54 >gi|296188751|ref|ZP_06857138.1| putative DNA-directed RNA polymerase, omega subunit [Clostridium carboxidivorans P7] gi|296046678|gb|EFG86125.1| putative DNA-directed RNA polymerase, omega subunit [Clostridium carboxidivorans P7] Length = 1050 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F + + ++I+F ++ ++ G G GK+++ + + + YG Sbjct: 1 MRPLKLTMTAFGPYAKKEEIDFTKLDGRNIFLITGPTGAGKTTIFDGLSYAIYGEASGED 60 Query: 83 HGDSIKKRS 91 + Sbjct: 61 RDSESLRSQ 69 >gi|291548765|emb|CBL25027.1| recF protein [Ruminococcus torques L2-14] Length = 363 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ ++R + ++ + F I+ G N GK+++ EA+ + R + Sbjct: 3 IKSLKLKNYRNY-DLLDLTFDPKTNILYGDNAQGKTNILEALYLSGTTKSHRGTKDRDMI 61 Query: 89 KRSIK 93 + Sbjct: 62 QFGYD 66 >gi|313889502|ref|ZP_07823148.1| DNA replication and repair protein RecF [Streptococcus pseudoporcinus SPIN 20026] gi|313122114|gb|EFR45207.1| DNA replication and repair protein RecF [Streptococcus pseudoporcinus SPIN 20026] Length = 364 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++ ++++R + E + +F L + G N GK++ EAI ++ + R Sbjct: 1 MWLKELTLTNYRNY-EQIQTKFVPGLNVFIGNNAQGKTNFLEAIYFIALTRSHR 53 >gi|56478791|ref|YP_160380.1| ATP-binding protein [Aromatoleum aromaticum EbN1] gi|56314834|emb|CAI09479.1| hypothetical ATP-binding protein [Aromatoleum aromaticum EbN1] Length = 432 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + +FR F + EF ++ G NG GK+SL +AI Sbjct: 1 MHIDTLRVENFRCFKQET-FEFQSGFNLLVGVNGSGKTSLLKAI 43 >gi|71030162|ref|XP_764723.1| RAD50 DNA repair protein [Theileria parva strain Muguga] gi|68351679|gb|EAN32440.1| RAD50 DNA repair protein, putative [Theileria parva] Length = 1002 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +EI R FT + +EF LT++ G+NG GK++L E+++ + G Sbjct: 4 INSLEIRGIRSFTPYRTEFLEFEKPLTLIVGKNGSGKTTLVESLKAVTSG 53 >gi|332981393|ref|YP_004462834.1| SMC domain-containing protein [Mahella australiensis 50-1 BON] gi|332699071|gb|AEE96012.1| SMC domain protein [Mahella australiensis 50-1 BON] Length = 484 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ E +++ L I G + GK+++ AI+W+ Y Sbjct: 6 YIEKILLENFQSH-EHTELDLTPGLNIFVGPSDSGKTAIIRAIKWVLY 52 >gi|329732499|gb|EGG68849.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus 21193] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|300087895|ref|YP_003758417.1| SMC domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527628|gb|ADJ26096.1| SMC domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 863 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Query: 31 DIEISHFRGFT-EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---QRRKHGD 85 +++ +F + +IQ F HL ++G NG GK+S+ +A+ W +G + + D Sbjct: 5 RLKLFNFLPYRGDIQPFSFDGIHLACISGANGAGKTSIIDAMTWALWGKSRAGSKSTGDD 64 Query: 86 SIKKRSIK 93 + + + Sbjct: 65 DLISQGER 72 >gi|285815731|gb|ADC36218.1| DNA recombination and repair protein RecF [Staphylococcus aureus 04-02981] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|283469233|emb|CAQ48444.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus ST398] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|282902635|ref|ZP_06310528.1| RecF protein [Staphylococcus aureus subsp. aureus C160] gi|282918072|ref|ZP_06325822.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus D139] gi|282921294|ref|ZP_06329012.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus C427] gi|283767794|ref|ZP_06340709.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus H19] gi|282315709|gb|EFB46093.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus C427] gi|282318357|gb|EFB48717.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus D139] gi|282597094|gb|EFC02053.1| RecF protein [Staphylococcus aureus subsp. aureus C160] gi|283461673|gb|EFC08757.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus H19] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|258423234|ref|ZP_05686126.1| recombination protein F [Staphylococcus aureus A9635] gi|257846563|gb|EEV70585.1| recombination protein F [Staphylococcus aureus A9635] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|253730403|ref|ZP_04864568.1| recombination protein F [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725883|gb|EES94612.1| recombination protein F [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|195443119|ref|XP_002069286.1| GK21116 [Drosophila willistoni] gi|194165371|gb|EDW80272.1| GK21116 [Drosophila willistoni] Length = 1329 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLF 74 S+ S +R +I K+++ +F+ + ++ F + + G NG GKS++ +++ ++F Sbjct: 68 SMESTGSRLIIKKIVN---QNFKSYAGGVELGPFHQSFSAIIGPNGSGKSNVIDSMMFVF 124 Query: 75 Y--GYTQRRKHGDSIKKRSIKTPM 96 R K ++ S P Sbjct: 125 GCRANRIRCKRVSTLIHSSSMFPK 148 >gi|74213333|dbj|BAB26022.3| unnamed protein product [Mus musculus] Length = 338 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|86608585|ref|YP_477347.1| exonuclease SbcC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557127|gb|ABD02084.1| exonuclease SbcC [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1105 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 + + +F + H + G NG GKS+L +A+ W +G ++ D I+K Sbjct: 5 RLTLHNFLCYAHAVLDLRGIHTACICGPNGAGKSALLDALTWGLWGQSRASNDSDLIRKG 64 Query: 91 SIK 93 + + Sbjct: 65 ASE 67 >gi|87161857|ref|YP_492726.1| recombination protein F [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|97180982|sp|Q2FKQ2|RECF_STAA3 RecName: Full=DNA replication and repair protein recF gi|87127831|gb|ABD22345.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus USA300_FPR3757] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|82749781|ref|YP_415522.1| recombination protein F [Staphylococcus aureus RF122] gi|97180987|sp|Q2YUN8|RECF_STAAB RecName: Full=DNA replication and repair protein recF gi|82655312|emb|CAI79692.1| DNA replication and repair protein [Staphylococcus aureus RF122] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|110632365|ref|YP_672573.1| recombination protein F [Mesorhizobium sp. BNC1] gi|110283349|gb|ABG61408.1| DNA replication and repair protein RecF [Chelativorans sp. BNC1] Length = 391 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 R + + +S+FR + + + ++ G+NG GK++L EAI +L G RR Sbjct: 13 RPAQVHIAKLTLSNFRNYASL-SLGLQPGAVVLTGENGAGKTNLLEAISFLSPGRGLRR 70 >gi|15922994|ref|NP_370528.1| recombination protein F [Staphylococcus aureus subsp. aureus Mu50] gi|15925709|ref|NP_373242.1| recombination protein F [Staphylococcus aureus subsp. aureus N315] gi|21281733|ref|NP_644819.1| recombination protein F [Staphylococcus aureus subsp. aureus MW2] gi|49482257|ref|YP_039481.1| recombination protein F [Staphylococcus aureus subsp. aureus MRSA252] gi|49484916|ref|YP_042137.1| recombination protein F [Staphylococcus aureus subsp. aureus MSSA476] gi|57651112|ref|YP_184915.1| recombination protein F [Staphylococcus aureus subsp. aureus COL] gi|88193827|ref|YP_498612.1| recombination protein F [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266451|ref|YP_001245394.1| recombination protein F [Staphylococcus aureus subsp. aureus JH9] gi|150392484|ref|YP_001315159.1| recombination protein F [Staphylococcus aureus subsp. aureus JH1] gi|151220215|ref|YP_001331038.1| recombination protein F [Staphylococcus aureus subsp. aureus str. Newman] gi|156978335|ref|YP_001440594.1| recombination protein F [Staphylococcus aureus subsp. aureus Mu3] gi|161508270|ref|YP_001573929.1| recombination protein F [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141519|ref|ZP_03566012.1| recombination protein F [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316842|ref|ZP_04840055.1| recombination protein F [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733835|ref|ZP_04868000.1| recombination protein F [Staphylococcus aureus subsp. aureus TCH130] gi|254663938|ref|ZP_05143410.1| recombination protein F [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424200|ref|ZP_05600629.1| recombination protein F [Staphylococcus aureus subsp. aureus 55/2053] gi|257426877|ref|ZP_05603279.1| recombination protein F [Staphylococcus aureus subsp. aureus 65-1322] gi|257429513|ref|ZP_05605900.1| recombination protein F [Staphylococcus aureus subsp. aureus 68-397] gi|257432160|ref|ZP_05608523.1| recombination protein F [Staphylococcus aureus subsp. aureus E1410] gi|257435121|ref|ZP_05611172.1| recombination protein F [Staphylococcus aureus subsp. aureus M876] gi|257793542|ref|ZP_05642521.1| recombination protein RecF [Staphylococcus aureus A9781] gi|258411152|ref|ZP_05681431.1| recombination protein RecF [Staphylococcus aureus A9763] gi|258420944|ref|ZP_05683878.1| recombination protein F [Staphylococcus aureus A9719] gi|258438583|ref|ZP_05689806.1| recombination protein F [Staphylococcus aureus A9299] gi|258443961|ref|ZP_05692299.1| recombination protein F [Staphylococcus aureus A8115] gi|258446223|ref|ZP_05694383.1| recombination protein F [Staphylococcus aureus A6300] gi|258449118|ref|ZP_05697224.1| recombination protein RecF [Staphylococcus aureus A6224] gi|258451363|ref|ZP_05699394.1| recombination protein F [Staphylococcus aureus A5948] gi|258454404|ref|ZP_05702372.1| recombination protein F [Staphylococcus aureus A5937] gi|262049436|ref|ZP_06022308.1| DNA replication and repair protein [Staphylococcus aureus D30] gi|262051892|ref|ZP_06024107.1| DNA replication and repair protein [Staphylococcus aureus 930918-3] gi|269201694|ref|YP_003280963.1| recombination protein F [Staphylococcus aureus subsp. aureus ED98] gi|282894283|ref|ZP_06302513.1| DNA replication and repair protein recF [Staphylococcus aureus A8117] gi|282907051|ref|ZP_06314899.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus Btn1260] gi|282910030|ref|ZP_06317838.1| recombination protein RecF [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912278|ref|ZP_06320074.1| recombination protein RecF [Staphylococcus aureus subsp. aureus WBG10049] gi|282912918|ref|ZP_06320710.1| RecF protein [Staphylococcus aureus subsp. aureus M899] gi|282920723|ref|ZP_06328442.1| DNA replication and repair protein recF [Staphylococcus aureus A9765] gi|282922546|ref|ZP_06330236.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus C101] gi|282927754|ref|ZP_06335368.1| DNA replication and repair protein recF [Staphylococcus aureus A10102] gi|283959488|ref|ZP_06376929.1| RecF protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284023041|ref|ZP_06377439.1| recombination protein F [Staphylococcus aureus subsp. aureus 132] gi|293497971|ref|ZP_06665825.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus 58-424] gi|293511561|ref|ZP_06670255.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus M809] gi|293550170|ref|ZP_06672842.1| RecF protein [Staphylococcus aureus subsp. aureus M1015] gi|294849832|ref|ZP_06790572.1| DNA replication and repair protein recF [Staphylococcus aureus A9754] gi|295406868|ref|ZP_06816672.1| DNA replication and repair protein recF [Staphylococcus aureus A8819] gi|295429301|ref|ZP_06821923.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275683|ref|ZP_06858190.1| recombination protein F [Staphylococcus aureus subsp. aureus MR1] gi|297209448|ref|ZP_06925846.1| recombination protein F [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245903|ref|ZP_06929765.1| DNA replication and repair protein recF [Staphylococcus aureus A8796] gi|297589197|ref|ZP_06947838.1| recombination protein F [Staphylococcus aureus subsp. aureus MN8] gi|300911472|ref|ZP_07128921.1| recombination protein F [Staphylococcus aureus subsp. aureus TCH70] gi|304379952|ref|ZP_07362681.1| recombination protein F [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|56749543|sp|Q6GD86|RECF_STAAS RecName: Full=DNA replication and repair protein recF gi|56749590|sp|Q6GKU1|RECF_STAAR RecName: Full=DNA replication and repair protein recF gi|56753681|sp|P68861|RECF_STAAM RecName: Full=DNA replication and repair protein recF gi|56753682|sp|P68862|RECF_STAAN RecName: Full=DNA replication and repair protein recF gi|56753685|sp|P68863|RECF_STAAU RecName: Full=DNA replication and repair protein recF gi|56753686|sp|P68864|RECF_STAAW RecName: Full=DNA replication and repair protein recF gi|81695634|sp|Q5HJZ2|RECF_STAAC RecName: Full=DNA replication and repair protein recF gi|122540544|sp|Q2G275|RECF_STAA8 RecName: Full=DNA replication and repair protein recF gi|166221868|sp|A7WWN1|RECF_STAA1 RecName: Full=DNA replication and repair protein recF gi|172048751|sp|A6QD43|RECF_STAAE RecName: Full=DNA replication and repair protein recF gi|189039645|sp|A6TXF4|RECF_STAA2 RecName: Full=DNA replication and repair protein recF gi|189039646|sp|A5INP5|RECF_STAA9 RecName: Full=DNA replication and repair protein recF gi|189039647|sp|A8YYS7|RECF_STAAT RecName: Full=DNA replication and repair protein recF gi|13699921|dbj|BAB41220.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus N315] gi|14245771|dbj|BAB56166.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203168|dbj|BAB93869.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus MW2] gi|49240386|emb|CAG39032.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus MRSA252] gi|49243359|emb|CAG41776.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus MSSA476] gi|57285298|gb|AAW37392.1| recF protein [Staphylococcus aureus subsp. aureus COL] gi|87201385|gb|ABD29195.1| DNA replication and repair protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147739520|gb|ABQ47818.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus JH9] gi|149944936|gb|ABR50872.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus JH1] gi|150373015|dbj|BAF66275.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus str. Newman] gi|156720470|dbj|BAF76887.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus Mu3] gi|160367079|gb|ABX28050.1| recombination protein RecF [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728138|gb|EES96867.1| recombination protein F [Staphylococcus aureus subsp. aureus TCH130] gi|257273218|gb|EEV05320.1| recombination protein F [Staphylococcus aureus subsp. aureus 55/2053] gi|257276508|gb|EEV07959.1| recombination protein F [Staphylococcus aureus subsp. aureus 65-1322] gi|257279994|gb|EEV10581.1| recombination protein F [Staphylococcus aureus subsp. aureus 68-397] gi|257283039|gb|EEV13171.1| recombination protein F [Staphylococcus aureus subsp. aureus E1410] gi|257285717|gb|EEV15833.1| recombination protein F [Staphylococcus aureus subsp. aureus M876] gi|257787514|gb|EEV25854.1| recombination protein RecF [Staphylococcus aureus A9781] gi|257840037|gb|EEV64502.1| recombination protein RecF [Staphylococcus aureus A9763] gi|257843134|gb|EEV67549.1| recombination protein F [Staphylococcus aureus A9719] gi|257848142|gb|EEV72134.1| recombination protein F [Staphylococcus aureus A9299] gi|257850845|gb|EEV74789.1| recombination protein F [Staphylococcus aureus A8115] gi|257855049|gb|EEV77992.1| recombination protein F [Staphylococcus aureus A6300] gi|257857551|gb|EEV80446.1| recombination protein RecF [Staphylococcus aureus A6224] gi|257860893|gb|EEV83710.1| recombination protein F [Staphylococcus aureus A5948] gi|257863498|gb|EEV86258.1| recombination protein F [Staphylococcus aureus A5937] gi|259160219|gb|EEW45248.1| DNA replication and repair protein [Staphylococcus aureus 930918-3] gi|259162433|gb|EEW47003.1| DNA replication and repair protein [Staphylococcus aureus D30] gi|262073984|gb|ACY09957.1| recombination protein F [Staphylococcus aureus subsp. aureus ED98] gi|269939530|emb|CBI47888.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus TW20] gi|282314767|gb|EFB45153.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus C101] gi|282323018|gb|EFB53337.1| RecF protein [Staphylococcus aureus subsp. aureus M899] gi|282323974|gb|EFB54290.1| recombination protein RecF [Staphylococcus aureus subsp. aureus WBG10049] gi|282326096|gb|EFB56401.1| recombination protein RecF [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329950|gb|EFB59471.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus Btn1260] gi|282590514|gb|EFB95592.1| DNA replication and repair protein recF [Staphylococcus aureus A10102] gi|282594131|gb|EFB99119.1| DNA replication and repair protein recF [Staphylococcus aureus A9765] gi|282763328|gb|EFC03458.1| DNA replication and repair protein recF [Staphylococcus aureus A8117] gi|283789080|gb|EFC27907.1| RecF protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290919217|gb|EFD96293.1| RecF protein [Staphylococcus aureus subsp. aureus M1015] gi|291096902|gb|EFE27160.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus 58-424] gi|291465519|gb|EFF08051.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus M809] gi|294823380|gb|EFG39809.1| DNA replication and repair protein recF [Staphylococcus aureus A9754] gi|294968333|gb|EFG44358.1| DNA replication and repair protein recF [Staphylococcus aureus A8819] gi|295127060|gb|EFG56704.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885909|gb|EFH24844.1| recombination protein F [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177268|gb|EFH36521.1| DNA replication and repair protein recF [Staphylococcus aureus A8796] gi|297577708|gb|EFH96421.1| recombination protein F [Staphylococcus aureus subsp. aureus MN8] gi|298693326|gb|ADI96548.1| recF protein [Staphylococcus aureus subsp. aureus ED133] gi|300887651|gb|EFK82847.1| recombination protein F [Staphylococcus aureus subsp. aureus TCH70] gi|302331776|gb|ADL21969.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302749915|gb|ADL64092.1| DNA repair and genetic recombination protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341532|gb|EFM07442.1| recombination protein F [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436855|gb|ADQ75926.1| recombination protein F [Staphylococcus aureus subsp. aureus TCH60] gi|312828567|emb|CBX33409.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129547|gb|EFT85539.1| recombination protein F [Staphylococcus aureus subsp. aureus CGS03] gi|315195230|gb|EFU25618.1| recombination protein F [Staphylococcus aureus subsp. aureus CGS00] gi|315197922|gb|EFU28255.1| recombination protein F [Staphylococcus aureus subsp. aureus CGS01] gi|320141421|gb|EFW33264.1| recombination protein F [Staphylococcus aureus subsp. aureus MRSA131] gi|320144404|gb|EFW36169.1| recombination protein F [Staphylococcus aureus subsp. aureus MRSA177] gi|323439695|gb|EGA97413.1| recombination protein F [Staphylococcus aureus O11] gi|323443268|gb|EGB00885.1| recombination protein F [Staphylococcus aureus O46] gi|329312727|gb|AEB87140.1| DNA replication and repair protein recF [Staphylococcus aureus subsp. aureus T0131] gi|329725526|gb|EGG62005.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus 21172] gi|329731646|gb|EGG68006.1| DNA replication and repair protein RecF [Staphylococcus aureus subsp. aureus 21189] Length = 370 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + + ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIKTP------------MPMCMAVPRCKYQLK 110 + + + MP+ M + + Q+K Sbjct: 60 LIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVK 95 >gi|183600189|ref|ZP_02961682.1| hypothetical protein PROSTU_03733 [Providencia stuartii ATCC 25827] gi|188022486|gb|EDU60526.1| hypothetical protein PROSTU_03733 [Providencia stuartii ATCC 25827] Length = 649 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + +FR F Q I +LT + G NG GK+ L +A++ +F ++R Sbjct: 1 MHIERINLQNFRSFGPGGQSIAVDPNLTTLVGANGAGKTVLMQALQRMFGISNEQR---- 56 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQL 109 +I+++ P + +P CK L Sbjct: 57 TIRRQDFHIP-SLDEEIP-CKRTL 78 >gi|160935861|ref|ZP_02083235.1| hypothetical protein CLOBOL_00754 [Clostridium bolteae ATCC BAA-613] gi|158441103|gb|EDP18820.1| hypothetical protein CLOBOL_00754 [Clostridium bolteae ATCC BAA-613] Length = 627 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+L + I F F ++ I F D L +V G+N GKS+L I + +G ++R Sbjct: 7 MKILSLHIEGFGKFHDLD-ISFKDGLNVVYGKNEAGKSTLHTFIRGMLFGIEKQRGR 62 >gi|149728135|ref|XP_001501978.1| PREDICTED: similar to SMC6 structural maintenance of chromosomes 6-like 1 [Equus caballus] Length = 1101 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|148271855|ref|YP_001221416.1| putative exonuclease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829785|emb|CAN00704.1| putative exonuclease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 1007 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + F I+FA+ L ++ G G GKS+L +A+ + YG Sbjct: 1 MDLHRLSVQAIGPFAGEHVIDFAELGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLA 57 >gi|42502|emb|CAA78294.1| hypothetical ATP binding protein [Escherichia coli] Length = 492 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 7/73 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----R 80 ++ DI + +++GF E ++F+ + TI+ G NG GKS++ +AI+ + R Sbjct: 61 LRVADIHLENYKGF-ESLIMDFSMKKNSTILVGNNGCGKSTILDAIQKGLTHLSSRLSTR 119 Query: 81 RKHGDSIKKRSIK 93 +GD I+K ++ Sbjct: 120 SHNGDGIEKHELR 132 >gi|66801073|ref|XP_629462.1| DNA recombination/repair protein [Dictyostelium discoideum AX4] gi|74996470|sp|Q54CS9|RAD50_DICDI RecName: Full=DNA repair protein RAD50; AltName: Full=DNA recombination/repair protein gi|60462868|gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4] Length = 1351 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + R F E I+F LT++ GQNG GK+++ E +++ G Sbjct: 4 IEKLLVQGIRSFDPREASVIDFYSPLTLIVGQNGAGKTTIIECLKYTCTG 53 >gi|238898017|ref|YP_002923697.1| protein used in recombination and DNA repair with nucleoside triphosphate hydrolase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465775|gb|ACQ67549.1| protein used in recombination and DNA repair with nucleoside triphosphate hydrolase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 553 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ------RRK 82 L+ + IS+F +I+F +T + G+ G GKS + +A+ G ++ R Sbjct: 2 LIQLTISNF-TLVSQLEIDFQSGMTSITGETGAGKSIVIDALNMCLGGRSESGMVSSRAL 60 Query: 83 HGDSIKKRSIKTP 95 D + S+K Sbjct: 61 RADMCARFSLKDK 73 >gi|157819723|ref|NP_001101484.1| structural maintenance of chromosomes protein 6 [Rattus norvegicus] gi|149050928|gb|EDM03101.1| SMC6 structural maintenance of chromosomes 6-like 1 (yeast) (predicted) [Rattus norvegicus] Length = 1097 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLK 113 >gi|91773238|ref|YP_565930.1| hypothetical protein Mbur_1259 [Methanococcoides burtonii DSM 6242] gi|91712253|gb|ABE52180.1| ATPase domain-like membrane protein [Methanococcoides burtonii DSM 6242] Length = 1280 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ D+ I F F + + + LT+++G+N GKS+L I +F+G+ +R + Sbjct: 1 MRITDLNIDGFGKFNDFSINDLGEGLTVLHGENEAGKSTLLSFIRRMFFGFPDKRSN 57 >gi|333030699|ref|ZP_08458760.1| hypothetical protein Bcop_1586 [Bacteroides coprosuis DSM 18011] gi|332741296|gb|EGJ71778.1| hypothetical protein Bcop_1586 [Bacteroides coprosuis DSM 18011] Length = 522 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I++ +F+ F + ++F + I G N GKS++ +AI+ + G R Sbjct: 1 MLTITKIKLHNFKRFKNLT-LDFNPDINIFVGDNESGKSTILQAIDLVARGSRTR 54 >gi|326912474|ref|XP_003202575.1| PREDICTED: structural maintenance of chromosomes protein 1B-like [Meleagris gallopavo] Length = 1234 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + + F+ + Q I + G NG GKS++ +A+ ++ Sbjct: 3 YLKLLMVKDFKSWRGEQLIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCEKIA 54 >gi|315925545|ref|ZP_07921755.1| SMC domain protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621086|gb|EFV01057.1| SMC domain protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 1062 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + L + ++ F F ++F DHL +++G G GKS++ + I + YG T + Sbjct: 1 MRPLKLTMTCFGPFLFET-VDFTALGDHLFLISGPTGSGKSTIFDGICYALYGETSASER 59 Query: 84 GDSIKKRSIKTPMPMC 99 K P C Sbjct: 60 RPEAMKSDFANPGEAC 75 >gi|299541762|ref|ZP_07052085.1| hypothetical protein BFZC1_22469 [Lysinibacillus fusiformis ZC1] gi|298725500|gb|EFI66141.1| hypothetical protein BFZC1_22469 [Lysinibacillus fusiformis ZC1] Length = 371 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++++R + + + F+ + + G+N GK+++ E+I L + R + Sbjct: 1 MYIEQIKLTNYRNY-DALALNFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRWDSD 66 >gi|257062757|ref|YP_003142429.1| recF protein [Slackia heliotrinireducens DSM 20476] gi|256790410|gb|ACV21080.1| recF protein [Slackia heliotrinireducens DSM 20476] Length = 376 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ FR + E +++ LTI G NG GK+++ EAI+ L + R H Sbjct: 3 IRIESFQLRDFRNY-ETFRLDGIGPLTIFIGPNGIGKTNVLEAIQLLTATPSFRHAHTQE 61 Query: 87 IKK 89 + + Sbjct: 62 LIR 64 >gi|91791372|ref|YP_561023.1| DNA replication and repair protein RecF [Shewanella denitrificans OS217] gi|123357292|sp|Q12TC6|RECF_SHEDO RecName: Full=DNA replication and repair protein recF gi|91713374|gb|ABE53300.1| DNA replication and repair protein RecF [Shewanella denitrificans OS217] Length = 360 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I FR + ++ L ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLQRISIESFRNIAAANLLP-SEGLNLIYGHNGSGKTSVLEAIYFLGMGRSFRS 54 >gi|283769260|ref|ZP_06342164.1| conserved hypothetical protein [Bulleidia extructa W1219] gi|283104236|gb|EFC05615.1| conserved hypothetical protein [Bulleidia extructa W1219] Length = 436 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +E+ + + ++ A+ LT+V G+N GK+S+ +AI W G + Sbjct: 4 IKINSLELENVKRVKAVKLEPTANGLTVVGGKNNQGKTSVLDAITWALGGEKYK 57 >gi|237738563|ref|ZP_04569044.1| DNA replication and repair protein recF [Fusobacterium sp. 2_1_31] gi|229424046|gb|EEO39093.1| DNA replication and repair protein recF [Fusobacterium sp. 2_1_31] Length = 369 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E +E +D + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNISYLNFRNL-ENTSVELSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTAE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|224025067|ref|ZP_03643433.1| hypothetical protein BACCOPRO_01801 [Bacteroides coprophilus DSM 18228] gi|224018303|gb|EEF76301.1| hypothetical protein BACCOPRO_01801 [Bacteroides coprophilus DSM 18228] Length = 516 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGD 85 + + + +FRG+ + F+ +LT G+N GKS++ EA++ + G + Sbjct: 1 MLIKSVTLKNFRGYRSETTVLFS-NLTTFVGRNDIGKSTILEALDIFFNEGKGCISLDKE 59 Query: 86 SI-KKRSIKTPMPMCMAV 102 I K+ S + + +AV Sbjct: 60 DINKRASSEGDDEIIIAV 77 >gi|326335069|ref|ZP_08201269.1| ATPase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692874|gb|EGD34813.1| ATPase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 350 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAI 70 K+ +I + +++ F E + I F + +T++ G NG GKSSL +AI Sbjct: 1 MKIKEITLRNYKRFVEQKTIFFHKDGEINDMTLIVGNNGTGKSSLLQAI 49 >gi|315125114|ref|YP_004067117.1| gap repair protein [Pseudoalteromonas sp. SM9913] gi|315013627|gb|ADT66965.1| gap repair protein [Pseudoalteromonas sp. SM9913] Length = 364 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR E +E + + I+ G+NG GK+SL EAI +L +G + R S Sbjct: 1 MSLSHLSLKYFRNI-EALTLEPVNGVNIIYGENGCGKTSLLEAIYYLSHGKSFRTSKHKS 59 Query: 87 IKKRSIKT 94 I Sbjct: 60 IIAHQQDQ 67 >gi|237806779|ref|YP_002891219.1| DNA replication and repair protein RecF [Tolumonas auensis DSM 9187] gi|237499040|gb|ACQ91633.1| DNA replication and repair protein RecF [Tolumonas auensis DSM 9187] Length = 357 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++I HFR + + + + ++ G NG GKSS+ EAI +L G + R + + Sbjct: 2 LHKLQIQHFRNLGQTEIYP-SGGMNLLLGLNGSGKSSVLEAIHYLSLGRSFRTHLTNRVI 60 Query: 89 KRSIK 93 + K Sbjct: 61 MQGEK 65 >gi|91976764|ref|YP_569423.1| ATP-dependent OLD family endonuclease [Rhodopseudomonas palustris BisB5] gi|91683220|gb|ABE39522.1| ATP-dependent endonuclease of the OLD family-like [Rhodopseudomonas palustris BisB5] Length = 669 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL---FYGYTQRRKH 83 L +++++ FR F + +IE LT+ G+N GKS+ +A+ L G + Sbjct: 1 MYLKNMKLNSFRSF-DQGEIELQKDLTVFVGENNGGKSNAIDAVRLLTTPLGGRREIYCE 59 Query: 84 GDSIKKRSIKTPMPM 98 ++ +S T + Sbjct: 60 STDVRFQSTTTYFEL 74 >gi|68171576|ref|ZP_00544950.1| recF protein [Ehrlichia chaffeensis str. Sapulpa] gi|88658291|ref|YP_506906.1| recombination protein F [Ehrlichia chaffeensis str. Arkansas] gi|67999002|gb|EAM85679.1| recF protein [Ehrlichia chaffeensis str. Sapulpa] gi|88599748|gb|ABD45217.1| putative DNA replication and repair protein RecF [Ehrlichia chaffeensis str. Arkansas] Length = 372 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + +FR + ++ ++ + ++ G+NG GK+++ EAI L G R + +S+ Sbjct: 8 YINNLRLVNFRNYINLE-LDTSSKSVVLLGKNGAGKTNILEAISLLSKGTGIRGVNTESM 66 Query: 88 KKRSIKTP 95 + +P Sbjct: 67 QNSLSNSP 74 >gi|302385769|ref|YP_003821591.1| SMC domain protein [Clostridium saccharolyticum WM1] gi|302196397|gb|ADL03968.1| SMC domain protein [Clostridium saccharolyticum WM1] Length = 424 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR---RKH 83 K+ +EI + + ++ A+ LTI+ G+N GK+S+ ++I W+ G R + Sbjct: 3 MKINQLEIENVKRIKAVKIEPSANGLTIIGGRNNQGKTSVLDSIAWVLGGDKFRPSQAQR 62 Query: 84 GDSIKKRSIKTPMPMCMAVPR 104 S+ +++ M + V R Sbjct: 63 DQSVIPPNLRITMSNGLVVER 83 >gi|282164092|ref|YP_003356477.1| putative DNA double-strand break repair Rad50 ATPase [Methanocella paludicola SANAE] gi|282156406|dbj|BAI61494.1| putative DNA double-strand break repair Rad50 ATPase [Methanocella paludicola SANAE] Length = 787 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + + + + + E IEF + +T ++G NG GKS++ E+I + + Sbjct: 1 MMIIKKVALKNIKSYGEDV-IEFQEGITSIHGLNGAGKSTVLESIGYALFDS 51 >gi|152983368|ref|YP_001354853.1| hypothetical protein mma_3163 [Janthinobacterium sp. Marseille] gi|151283445|gb|ABR91855.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 634 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 KL +++FR + + F+ D +TI+ GQN GK+S+ EA+ Sbjct: 1 MKLRSFRVTNFRSIIDTGWVNFSTDGITILVGQNESGKTSILEAL 45 >gi|323463205|gb|ADX75358.1| DNA replication and repair protein RecF [Staphylococcus pseudintermedius ED99] Length = 371 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EQISLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTTNDRE 59 Query: 87 IKKRSIK 93 + + + + Sbjct: 60 LIRFNAE 66 >gi|297162233|gb|ADI11945.1| exonuclease [Streptomyces bingchenggensis BCW-1] Length = 1151 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + ++ F F Q+++F + L +++G G GK+S+ +A+ + YG + Sbjct: 1 MRLHRLTMTAFGPFGTTQEVDFDELSSAGLFLLHGPTGAGKTSVLDAVCYGLYGQVPGAR 60 Query: 83 HGDSIKKRS 91 G + RS Sbjct: 61 QGSGLSLRS 69 >gi|288554609|ref|YP_003426544.1| recombination protein F [Bacillus pseudofirmus OF4] gi|288545769|gb|ADC49652.1| recombination protein F [Bacillus pseudofirmus OF4] Length = 371 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I FR + E ++EF + + + G+N GK++ EAI L + R Sbjct: 1 MFIKSLLIRQFRNY-ERVELEFDERMNVFIGENAQGKTNTIEAIYVLALAKSHRTSKDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|237735519|ref|ZP_04566000.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229381264|gb|EEO31355.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 444 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 29/56 (51%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +E+ + + ++ + LT++ G+N GK+S+ ++I W G + Sbjct: 1 MTIKINSLELENVKRIKAVKVEPNQNGLTVIGGRNNQGKTSVLDSIAWALGGNKFK 56 >gi|166366712|ref|YP_001658985.1| ATPase [Microcystis aeruginosa NIES-843] gi|166089085|dbj|BAG03793.1| ATPase [Microcystis aeruginosa NIES-843] Length = 426 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I++ ++RG + I+F L + G NG GKS++ +++ + R K+ ++ Sbjct: 1 MRIKSIKLDNYRGVVSLN-IDFHRQLNVFIGVNGAGKSTILDSLAIMLSWLVNRLKNTNA 59 Query: 87 IKKRSIKTP 95 ++ +T Sbjct: 60 SGRKISETE 68 >gi|315605505|ref|ZP_07880542.1| recombination protein F [Actinomyces sp. oral taxon 180 str. F0310] gi|315312772|gb|EFU60852.1| recombination protein F [Actinomyces sp. oral taxon 180 str. F0310] Length = 398 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 ++ + + FR + +E T++ G NG GK++L EA+ +L + R G Sbjct: 1 MRVSHLALDDFRSWKHGV-VELPAGTTVLVGANGQGKTNLVEALAYLSAFSSHRVGAEGA 59 Query: 86 SIKKRSIKTPMPMCMAVPRCK 106 ++ S + P AV R + Sbjct: 60 LVRIPSDEAENPPGGAVIRAR 80 >gi|312137518|ref|YP_004004854.1| DNA replication and repair protein recf [Rhodococcus equi 103S] gi|311886857|emb|CBH46165.1| DNA replication and repair protein RecF [Rhodococcus equi 103S] Length = 408 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + ++ T+ G+NG+GK++L EA+ +L + R Sbjct: 1 MFVRKFSLRDFRSW-DAVTVDLEPGCTVFVGRNGHGKTNLLEALGYLSTLSSHRVSSDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIRAGAPQ 67 >gi|325677517|ref|ZP_08157181.1| recombination protein F [Rhodococcus equi ATCC 33707] gi|325551764|gb|EGD21462.1| recombination protein F [Rhodococcus equi ATCC 33707] Length = 408 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + ++ T+ G+NG+GK++L EA+ +L + R Sbjct: 1 MFVRKFSLRDFRSW-DAVTVDLEPGCTVFVGRNGHGKTNLLEALGYLSTLSSHRVSSDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIRAGAPQ 67 >gi|256821231|ref|YP_003145194.1| DNA replication and repair protein RecF [Kangiella koreensis DSM 16069] gi|256794770|gb|ACV25426.1| DNA replication and repair protein RecF [Kangiella koreensis DSM 16069] Length = 369 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +FR + ++ F+ L I+ G N GK+S+ E++ L +G + R Sbjct: 1 MHIQSLSIQNFRNL-QPSRLHFSPQLNIIYGNNAAGKTSILESLFILGHGRSFRTSRHSK 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LINYEQDS 67 >gi|188576462|ref|YP_001913391.1| hypothetical protein PXO_00630 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520914|gb|ACD58859.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 535 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + L + I I +F+ F + + H+ +V G N GKS+L EAI + G R Sbjct: 5 GKGLCMPIERIVIDNFKSFRHLD-LPLNSHMNLVVGDNEVGKSTLLEAIHAVVTGQLHGR 63 >gi|221133450|ref|ZP_03559755.1| ATPase involved in DNA repair [Glaciecola sp. HTCC2999] Length = 1191 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + + KI+F + L + G G GK+++ +AI Y T R Sbjct: 1 MKILSVLLENLNSIEQKWKIDFTADEFADNGLFAITGPTGAGKTTILDAICLALYHTTPR 60 Query: 81 RKHG 84 G Sbjct: 61 TGSG 64 >gi|90408444|ref|ZP_01216604.1| recombination protein F [Psychromonas sp. CNPT3] gi|90310428|gb|EAS38553.1| recombination protein F [Psychromonas sp. CNPT3] Length = 360 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + I FR + F + ++ G NG GK++L EAI +L G + R Sbjct: 1 MPITKLVIHQFRNIHSAT-LHFNKQINVITGDNGSGKTALLEAIYFLGLGRSFRS 54 >gi|313106799|ref|ZP_07793013.1| putative exonuclease [Pseudomonas aeruginosa 39016] gi|310879515|gb|EFQ38109.1| putative exonuclease [Pseudomonas aeruginosa 39016] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|311063462|ref|YP_003970187.1| RecF DNA replication and repair protein [Bifidobacterium bifidum PRL2010] gi|310865781|gb|ADP35150.1| RecF DNA replication and repair protein [Bifidobacterium bifidum PRL2010] Length = 437 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + H+R + ++ + I+ G NG GK+++ EAIE L G + R Sbjct: 1 MYISRLALDHYRSWNHCV-LDLTPGINILQGANGLGKTNIVEAIEVLSTGLSHR 53 >gi|296390979|ref|ZP_06880454.1| putative exonuclease [Pseudomonas aeruginosa PAb1] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|289764767|ref|ZP_06524145.1| exonuclease SBCC [Fusobacterium sp. D11] gi|289716322|gb|EFD80334.1| exonuclease SBCC [Fusobacterium sp. D11] Length = 233 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 5 IKKVQLENYRSHSNIT-VEFTKGINLILGKNGRGKTSILEAISTVMFNTKDRSGK 58 >gi|218893374|ref|YP_002442243.1| putative exonuclease [Pseudomonas aeruginosa LESB58] gi|218773602|emb|CAW29416.1| probable exonuclease [Pseudomonas aeruginosa LESB58] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|107100133|ref|ZP_01364051.1| hypothetical protein PaerPA_01001154 [Pseudomonas aeruginosa PACS2] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|28210315|ref|NP_781259.1| exonuclease sbcC [Clostridium tetani E88] gi|28202751|gb|AAO35196.1| exonuclease sbcC [Clostridium tetani E88] Length = 1045 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQ 79 K L + + F + ++Q I+F ++ ++NG G GK+++ +AI + +G T Sbjct: 1 MKPLKLTMCAFGPYADVQIIDFTELDNRNIFLINGPTGAGKTTIFDAISYALFGEASNTN 60 Query: 80 RRKHGDSIKKRSIKT 94 + + G S +T Sbjct: 61 KDRDGLRSDFASQET 75 >gi|15599478|ref|NP_252972.1| exonuclease [Pseudomonas aeruginosa PAO1] gi|17433243|sp|Q9HWB8|SBCC_PSEAE RecName: Full=Nuclease sbcCD subunit C gi|9950502|gb|AAG07670.1|AE004844_2 probable exonuclease [Pseudomonas aeruginosa PAO1] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|116052316|ref|YP_792627.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14] gi|115587537|gb|ABJ13552.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14] Length = 1211 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|125974387|ref|YP_001038297.1| SMC protein-like protein [Clostridium thermocellum ATCC 27405] gi|125714612|gb|ABN53104.1| SMC protein-like protein [Clostridium thermocellum ATCC 27405] Length = 688 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +FR E + I+F ++ G+N GKS++ +A++ + Sbjct: 1 MFVSKLLIRNFRSI-EKESIDFRPGKNVLVGKNNSGKSNIVKALDLVLGE 49 >gi|328713323|ref|XP_001948559.2| PREDICTED: DNA repair protein RAD50-like [Acyrthosiphon pisum] Length = 1303 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I I R + E Q ++F LT++ GQNG GK+++ E ++++ Sbjct: 4 LESISIQGIRSYHPDEKQTLKFYKPLTLILGQNGCGKTTIIECLKYI 50 >gi|322786052|gb|EFZ12663.1| hypothetical protein SINV_01372 [Solenopsis invicta] Length = 1196 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 32 IEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I F+ + E +E F +V G+NG GKS+ AI+++ Sbjct: 1 VIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL 44 >gi|284988633|ref|YP_003407187.1| DNA replication and repair protein RecF [Geodermatophilus obscurus DSM 43160] gi|284061878|gb|ADB72816.1| DNA replication and repair protein RecF [Geodermatophilus obscurus DSM 43160] Length = 399 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR + + + T+ G+NG GK++L EA+ +L + R Sbjct: 1 MYLRHLQLGSFRNW-DRVDLALRPGPTVFVGRNGEGKTNLVEAVGYLATMGSHRVAGDAP 59 Query: 87 IKKRSIKT 94 + ++ Sbjct: 60 LVRQGASQ 67 >gi|114766425|ref|ZP_01445394.1| hypothetical protein 1100011001358_R2601_25731 [Pelagibaca bermudensis HTCC2601] gi|114541366|gb|EAU44414.1| hypothetical protein R2601_25731 [Roseovarius sp. HTCC2601] Length = 865 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL IE+ + R FT +I+ D L +++ N GKS+L +A++ LF+ Sbjct: 1 MKLRAIELHNVRQFTSPVRIDGIGDGLNVLSEPNEAGKSTLFDALQALFF 50 >gi|255037172|ref|YP_003087793.1| SMC domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949928|gb|ACT94628.1| SMC domain protein [Dyadobacter fermentans DSM 18053] Length = 1032 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Query: 30 LDIEISHFRGFTEIQKIEFADHLT-----IVNGQNGYGKSSLSEAIEWLFYGYTQR-RKH 83 ++I + Q+I+F D LT + G G GKSS+ EAI + YG T+R K Sbjct: 4 KRLKIKGLYSYQTEQEIDF-DPLTDASLFGIFGSVGSGKSSILEAITFALYGDTERLNKS 62 Query: 84 GDS 86 GD Sbjct: 63 GDD 65 >gi|91202097|emb|CAJ75157.1| hypothetical protein kuste4395 [Candidatus Kuenenia stuttgartiensis] Length = 698 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL +I I +FR E +I+ D T+ G N GK+S + + G R Sbjct: 1 MKLKNIHIKNFRRL-EEVQIDLDDGETVFVGPNNSGKTSATVIFRYFLKGNEFR 53 >gi|301167076|emb|CBW26655.1| putative exonuclease [Bacteriovorax marinus SJ] Length = 1078 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L IEI + I+F D L + G G GKSS+ AI YG ++ Sbjct: 1 MRLKSIEIENITSLKGKHYIDFEDILKEGELFAITGPTGSGKSSILTAISLALYGKNYKK 60 >gi|326792001|ref|YP_004309822.1| SMC domain protein [Clostridium lentocellum DSM 5427] gi|326542765|gb|ADZ84624.1| SMC domain protein [Clostridium lentocellum DSM 5427] Length = 1033 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + ++++ F + Q I+F ++ ++ G G GK+++ +AI + YG T + Sbjct: 1 MRPRLLKMTAFGPYAGEQIIDFERLEDANMFLIYGPTGGGKTTILDAICYALYGETNGGE 60 Query: 83 H-GDSIK 88 G++++ Sbjct: 61 RSGETMR 67 >gi|209542191|ref|YP_002274420.1| recombination protein F [Gluconacetobacter diazotrophicus PAl 5] gi|209529868|gb|ACI49805.1| DNA replication and repair protein RecF [Gluconacetobacter diazotrophicus PAl 5] Length = 373 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ FR + + +T+V G+NG GK++L EA+ L G R + Sbjct: 3 RLDRLALTDFRNYRHLA-WRPEAPVTVVTGENGSGKTNLLEALSLLVPGRGLRGARSAEM 61 Query: 88 KKRS 91 + Sbjct: 62 ARHG 65 >gi|162147557|ref|YP_001602018.1| recombination protein F [Gluconacetobacter diazotrophicus PAl 5] gi|161786134|emb|CAP55716.1| putative DNA replication and repair protein recF [Gluconacetobacter diazotrophicus PAl 5] Length = 373 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + ++ FR + + +T+V G+NG GK++L EA+ L G R + Sbjct: 3 RLDRLALTDFRNYRHLA-WRPEAPVTVVTGENGSGKTNLLEALSLLVPGRGLRGARSAEM 61 Query: 88 KKRS 91 + Sbjct: 62 ARHG 65 >gi|121704612|ref|XP_001270569.1| DNA repair protein Rad18, putative [Aspergillus clavatus NRRL 1] gi|119398715|gb|EAW09143.1| DNA repair protein Rad18, putative [Aspergillus clavatus NRRL 1] Length = 1132 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 99 LERVECYNFMCH-DHFQVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 157 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK V R K Q Sbjct: 158 -SFIKEGKESATIVVRIKNQ 176 >gi|157962133|ref|YP_001502167.1| hypothetical protein Spea_2312 [Shewanella pealeana ATCC 700345] gi|157847133|gb|ABV87632.1| hypothetical protein Spea_2312 [Shewanella pealeana ATCC 700345] Length = 260 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT----IVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL +I I++F + Q ++F H T ++ G N GK+S +I W FYG R Sbjct: 1 MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGR 59 >gi|157368360|ref|YP_001476349.1| hypothetical protein Spro_0111 [Serratia proteamaculans 568] gi|157320124|gb|ABV39221.1| conserved hypothetical protein [Serratia proteamaculans 568] Length = 368 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I ++ G +E+ EF L I+ G+NG GK+++ + + G + Sbjct: 1 MKLESITVTGLFGKSEVVHYEFHHDLNIITGRNGSGKTTILKLAWLIMSGNIYWALKEIN 60 Query: 87 IKKRSIKTPMPMCM 100 K + T C+ Sbjct: 61 FKICKLVTNEYTCV 74 >gi|310777808|ref|YP_003966141.1| DNA replication and repair protein RecF [Ilyobacter polytropus DSM 2926] gi|309747131|gb|ADO81793.1| DNA replication and repair protein RecF [Ilyobacter polytropus DSM 2926] Length = 376 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +I +FR + ++F+ + G+NG GK+S+ EA+ + G + R + Sbjct: 1 MQISEINYVNFRNLKDNN-LKFSSKFNLFLGKNGQGKTSILEAVYFSATGKSFRTPRQNE 59 Query: 87 IKKRSIK 93 I S + Sbjct: 60 IINHSRE 66 >gi|295691339|ref|YP_003595032.1| DNA replication and repair protein RecF [Caulobacter segnis ATCC 21756] gi|295433242|gb|ADG12414.1| DNA replication and repair protein RecF [Caulobacter segnis ATCC 21756] Length = 387 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + ++ FR + E ++E + + G NG GK++L EAI L G + G ++ Sbjct: 6 LLSLTLTDFRSY-ERARLETSGRSVYLFGPNGAGKTNLLEAISLLTPG---KGLRGANLA 61 Query: 89 KRSIKTPMP 97 + + P Sbjct: 62 EVGRRLPGE 70 >gi|149280279|ref|ZP_01886401.1| DNA replication and repair protein RecF, ABC family ATPase [Pedobacter sp. BAL39] gi|149228968|gb|EDM34365.1| DNA replication and repair protein RecF, ABC family ATPase [Pedobacter sp. BAL39] Length = 367 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +I + +F+ +++ I F+ + G NG GK++L +AI +L Sbjct: 1 MWLKNITLLNFKNYSDAN-ISFSKTVNAFVGNNGAGKTNLLDAIHYL 46 >gi|111219509|ref|YP_710303.1| recombination protein F [Frankia alni ACN14a] gi|122954749|sp|Q0RUP6|RECF_FRAAA RecName: Full=DNA replication and repair protein recF gi|111147041|emb|CAJ58688.1| DNA replication and repair protein recF [Frankia alni ACN14a] Length = 378 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + + + + G+NG GK++L EAI ++ + R Sbjct: 1 MHLTHLSLVDFRSYPSLD-LTLGPGVVTLVGRNGQGKTNLIEAIGYVATLASHRVSADAP 59 Query: 87 IKKRS 91 + ++ Sbjct: 60 LVRQG 64 >gi|323465561|gb|ADX69248.1| DNA replication and repair protein recF [Lactobacillus helveticus H10] Length = 375 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + +FR + I+F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDHFVVQNFRNL-KKLDIDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHR 53 >gi|260101875|ref|ZP_05752112.1| recombination protein F [Lactobacillus helveticus DSM 20075] gi|260084303|gb|EEW68423.1| recombination protein F [Lactobacillus helveticus DSM 20075] gi|328468763|gb|EGF39734.1| recombination protein F [Lactobacillus helveticus MTCC 5463] Length = 375 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + +FR + I+F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDHFVVQNFRNL-KKLDIDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHR 53 >gi|161506638|ref|YP_001576586.1| recombination protein F [Lactobacillus helveticus DPC 4571] gi|172048333|sp|A8YW44|RECF_LACH4 RecName: Full=DNA replication and repair protein recF gi|160347627|gb|ABX26301.1| DNA repair and genetic recombination protein [Lactobacillus helveticus DPC 4571] Length = 375 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + +FR + I+F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDHFVVQNFRNL-KKLDIDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHR 53 >gi|150020978|ref|YP_001306332.1| ATP-dependent OLD family endonuclease [Thermosipho melanesiensis BI429] gi|149793499|gb|ABR30947.1| ATP-dependent endonuclease of the OLD family-like protein [Thermosipho melanesiensis BI429] Length = 616 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ + + +FR F +I D T+ G+N GKS++ EAI Sbjct: 1 MKIAKVILENFRAFYGRNEIPIED-FTVFIGRNDQGKSTILEAI 43 >gi|296127993|ref|YP_003635243.1| putative exonuclease [Cellulomonas flavigena DSM 20109] gi|296019808|gb|ADG73044.1| putative exonuclease [Cellulomonas flavigena DSM 20109] Length = 1046 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +L + + F ++ L ++ G G GKS+L +A+ + YG Sbjct: 1 MRLRSLTVQAIGPFAGRHTVDLDALGQSGLFLLEGPTGSGKSTLIDAVVFALYGKVAGTD 60 Query: 83 HGDSIKKRSI-----KTPMPMCMAVPRCKYQLK 110 D + + ++ + + VP Y+++ Sbjct: 61 ASDERLRSAYAADDVESVVDLVFEVPSGVYRVR 93 >gi|163800493|ref|ZP_02194394.1| hypothetical protein 1103602000595_AND4_07419 [Vibrio sp. AND4] gi|159175936|gb|EDP60730.1| hypothetical protein AND4_07419 [Vibrio sp. AND4] Length = 553 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + I +F+ E + EF + + I+ G N GK+++ EA+E + + G Sbjct: 4 LMYIEKLTIKNFKKI-ESGEYEFNEKVNILVGDNDSGKTTILEALELV----SSSNYRGK 58 Query: 86 SI 87 SI Sbjct: 59 SI 60 >gi|293191014|ref|ZP_06609058.1| RecF protein [Actinomyces odontolyticus F0309] gi|292820701|gb|EFF79667.1| RecF protein [Actinomyces odontolyticus F0309] Length = 398 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + FR + +E + T++ G NG GK++L EA+ +L + R + Sbjct: 1 MRVSHLALDDFRSWKHGV-VELPEGPTVLVGANGQGKTNLVEALAYLSTFSSHRVGAEGA 59 Query: 87 IKKRSIK 93 + + I Sbjct: 60 LVRIPID 66 >gi|255973421|ref|ZP_05424007.1| purine NTPase [Enterococcus faecalis T2] gi|255966293|gb|EET96915.1| purine NTPase [Enterococcus faecalis T2] Length = 785 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I + +F+ +I F ++ L +++G NG+GK+++ +AIE + G R Sbjct: 4 LRINKIYLKNFK-HVNEAEINFNNNDLIVLDGPNGFGKTTIFDAIELVMTGKISR 57 >gi|154508242|ref|ZP_02043884.1| hypothetical protein ACTODO_00736 [Actinomyces odontolyticus ATCC 17982] gi|153797876|gb|EDN80296.1| hypothetical protein ACTODO_00736 [Actinomyces odontolyticus ATCC 17982] Length = 398 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + FR + +E + T++ G NG GK++L EA+ +L + R + Sbjct: 1 MRVSHLALDDFRSWKHGV-VELPEGPTVLVGANGQGKTNLVEALAYLSTFSSHRVGAEGA 59 Query: 87 IKKRSIK 93 + + I Sbjct: 60 LVRIPID 66 >gi|25147160|ref|NP_509956.2| hypothetical protein C44C10.4 [Caenorhabditis elegans] gi|22265835|emb|CAA93638.2| C. elegans protein C44C10.4, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 537 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +LL ++I +F+ + + DH+T G NG GKS + EAI ++F Sbjct: 7 RLLTVDILNFKCYQHHKSFGPFDHVTTFIGMNGCGKSIMIEAIAFVFGE 55 >gi|84996705|ref|XP_953074.1| chromosome segregation protein (SMC homologue) [Theileria annulata strain Ankara] gi|65304070|emb|CAI76449.1| chromosome segregation protein (SMC homologue), putative [Theileria annulata] Length = 1266 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ ++ I H V G NG GKS++ +++ ++F + Sbjct: 1 MYIEYVILDGFKSYSTRTVIGPLDPHFNAVTGLNGSGKSNVLDSLCFVFGITDLSLVRAN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 KLDELIYKQ 69 >gi|307282353|ref|ZP_07562561.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0860] gi|306503801|gb|EFM73027.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0860] Length = 788 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I + +F+ +I F ++ L +++G NG+GK+++ +AIE + G R Sbjct: 7 LRINKIYLKNFK-HVNEAEINFNNNDLIVLDGPNGFGKTTIFDAIELVMTGKISR 60 >gi|304398066|ref|ZP_07379941.1| DNA replication and repair protein RecF [Pantoea sp. aB] gi|304354352|gb|EFM18724.1| DNA replication and repair protein RecF [Pantoea sp. aB] Length = 361 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E ++ A + G NG GK+S+ EAI L +G + R Sbjct: 1 MALTRLLIKDFRNI-EQADLQLAPGFNFLVGANGSGKTSVLEAIHTLGHGRSFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|326780713|ref|ZP_08239978.1| putative exonuclease [Streptomyces cf. griseus XylebKG-1] gi|326661046|gb|EGE45892.1| putative exonuclease [Streptomyces cf. griseus XylebKG-1] Length = 1020 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + I+ F F Q+++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLSITAFGPFGATQEVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYG 54 >gi|91092828|ref|XP_968011.1| PREDICTED: similar to structural maintenance of chromosomes smc4 [Tribolium castaneum] gi|270004790|gb|EFA01238.1| gluon [Tribolium castaneum] Length = 1277 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I ++F+ + E + F+ + G NG GKS++ +++ ++F GY R Sbjct: 54 ITKIVNNYFKSYAENVVLGPFSKCFNAIIGPNGSGKSNVIDSMLFVF-GYRATRMR 108 >gi|15964255|ref|NP_384608.1| hypothetical protein SMc02153 [Sinorhizobium meliloti 1021] gi|15073431|emb|CAC41939.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 443 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + +++FR F + I F LT++ +NG GK+++ +A Sbjct: 4 LRLDKLSLTNFRCFAHCE-IAFHPGLTVLVAENGSGKTAVLDAARAAL 50 >gi|255535243|ref|YP_003095614.1| hypothetical protein FIC_01102 [Flavobacteriaceae bacterium 3519-10] gi|255341439|gb|ACU07552.1| hypothetical protein FIC_01102 [Flavobacteriaceae bacterium 3519-10] Length = 550 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Query: 27 FKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ I+I +FR TE +F I GQN GK++ EA+E+ F G + + Sbjct: 1 MKIKAIKIDNFRSIQQTEFTTTDF----NIFVGQNNCGKTNFFEAVEFFFNGIS-KSTKL 55 Query: 85 DSIKKRSIKTPMPMCMAV 102 + +K + +T + + + Sbjct: 56 EDLKFKR-ETEREIIVEI 72 >gi|206900488|ref|YP_002250767.1| DNA repair protein RecN [Dictyoglomus thermophilum H-6-12] gi|206739591|gb|ACI18649.1| DNA repair protein RecN [Dictyoglomus thermophilum H-6-12] Length = 580 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + + F + ++F D ++ G+ G GKS L +A+ +L Sbjct: 2 LLALRVKDF-AIIDEITLDFHDGFNVITGETGAGKSLLVDAVAFLLGERASTDIIRSGSN 60 Query: 89 KRSIKTPMPMCMAVPR 104 + ++ M V R Sbjct: 61 RTLVEAMFTMNEEVER 76 >gi|126732396|ref|ZP_01748195.1| hypothetical protein SSE37_05587 [Sagittula stellata E-37] gi|126707035|gb|EBA06102.1| hypothetical protein SSE37_05587 [Sagittula stellata E-37] Length = 868 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I +++ R FTE +++ D L ++ N +GKS+L +AI+ LF+ Sbjct: 1 MKLRSITLNNVRRFTEPARVDGLGDGLNVLCEPNEHGKSTLFDAIQALFF 50 >gi|115403001|ref|XP_001217577.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189423|gb|EAU31123.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 604 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + +E + + G+NG GKS++ AI G G S+K Sbjct: 102 LERVECYNFMCH-DHFHVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 160 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK V R K Q Sbjct: 161 NF-IKEGKESATIVVRIKNQ 179 >gi|77358985|ref|YP_338560.1| gap repair protein [Pseudoalteromonas haloplanktis TAC125] gi|97180877|sp|Q3IDE8|RECF_PSEHT RecName: Full=DNA replication and repair protein recF gi|76873896|emb|CAI85117.1| gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Pseudoalteromonas haloplanktis TAC125] Length = 364 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR E +E + + I+ G+NG GK+SL EAI +L +G + R S Sbjct: 1 MSLSHLSLKYFRNI-EALTLEPVNGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTSKHKS 59 Query: 87 IKKRSIKT 94 I + Sbjct: 60 IIAHQQEQ 67 >gi|109896335|ref|YP_659590.1| DNA replication and repair protein RecF [Pseudoalteromonas atlantica T6c] gi|123361468|sp|Q15ZZ5|RECF_PSEA6 RecName: Full=DNA replication and repair protein recF gi|109698616|gb|ABG38536.1| DNA replication and repair protein RecF [Pseudoalteromonas atlantica T6c] Length = 363 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++I + R + + + + + G NG GKSS+ EAI +L +G + R + Sbjct: 1 MKLDSVQIRNLRNL-QHVTFKPSHGVNFILGINGSGKSSILEAIHYLGFGRSFRTSKHKN 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIQNEQES 67 >gi|86159692|ref|YP_466477.1| OLD family-like ATP-dependent endonuclease [Anaeromyxobacter dehalogenans 2CP-C] gi|85776203|gb|ABC83040.1| OLD family-like ATP-dependent endonuclease [Anaeromyxobacter dehalogenans 2CP-C] Length = 758 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + I +FR F IEF + ++ G+N GK+++ +A+ LF Sbjct: 96 MHLATLRIENFRCFGSSGITIEFQAGMNVILGENNVGKTAIVDALRLLF 144 >gi|331091448|ref|ZP_08340286.1| hypothetical protein HMPREF9477_00929 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404004|gb|EGG83554.1| hypothetical protein HMPREF9477_00929 [Lachnospiraceae bacterium 2_1_46FAA] Length = 432 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 28/56 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +EI + + ++ + LT++ G N GK+S+ ++I W G R Sbjct: 1 MTMKINKLEIENVKRIRAVKIEPTQNGLTVIGGNNNQGKTSVLDSIAWALGGENFR 56 >gi|294505883|ref|YP_003569941.1| DNA replication and repair protein recF [Salinibacter ruber M8] gi|294342211|emb|CBH22989.1| DNA replication and repair protein recF [Salinibacter ruber M8] Length = 412 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + FR E + + A + ++ G NG GK+++ EA+ +L + Sbjct: 3 LHTLRLRSFRAHAESE-FDLAPSINLLYGANGAGKTNVLEAVHYLCLTKSFTASRDRYAV 61 Query: 89 KR 90 ++ Sbjct: 62 RK 63 >gi|115376902|ref|ZP_01464123.1| RecF/RecN/SMC N terminal domain, putative [Stigmatella aurantiaca DW4/3-1] gi|310825364|ref|YP_003957722.1| hypothetical protein STAUR_8140 [Stigmatella aurantiaca DW4/3-1] gi|115366081|gb|EAU65095.1| RecF/RecN/SMC N terminal domain, putative [Stigmatella aurantiaca DW4/3-1] gi|309398436|gb|ADO75895.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 414 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L +++ F+ + + ++ G+NG GKS+L EA++W+ Sbjct: 13 LRLTSVQVERFKAAFKPTPVPL-RPFNLILGRNGAGKSTLLEALQWV 58 >gi|83814830|ref|YP_444220.1| DNA replication and repair protein RecF [Salinibacter ruber DSM 13855] gi|97180944|sp|Q2S6G1|RECF_SALRD RecName: Full=DNA replication and repair protein recF gi|83756224|gb|ABC44337.1| DNA replication and repair protein RecF [Salinibacter ruber DSM 13855] Length = 412 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + FR E + + A + ++ G NG GK+++ EA+ +L + Sbjct: 3 LHTLRLRSFRAHAESE-FDLAPSINLLYGANGAGKTNVLEAVHYLCLTKSFTASRDRYAV 61 Query: 89 KR 90 ++ Sbjct: 62 RK 63 >gi|305666506|ref|YP_003862793.1| DNA replication and repair protein RecF [Maribacter sp. HTCC2170] gi|88708773|gb|EAR01008.1| DNA replication and repair protein RecF, ABC family ATPase [Maribacter sp. HTCC2170] Length = 359 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +++ F + Q EF G NG GK++ +AI L +G Sbjct: 1 MFLKKLSLINYKNF-DSQTFEFDSKTNCFVGPNGVGKTNALDAIYHLSFG 49 >gi|255525206|ref|ZP_05392148.1| exonuclease SbcC [Clostridium carboxidivorans P7] gi|255511069|gb|EET87367.1| exonuclease SbcC [Clostridium carboxidivorans P7] Length = 637 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F + + ++I+F ++ ++ G G GK+++ + + + YG Sbjct: 1 MRPLKLTMTAFGPYAKKEEIDFTKLDGRNIFLITGPTGAGKTTIFDGLSYAIYGEASGED 60 Query: 83 HGDSIKKRS 91 + Sbjct: 61 RDSESLRSQ 69 >gi|212635947|ref|YP_002312472.1| exonuclease SbcC [Shewanella piezotolerans WP3] gi|212557431|gb|ACJ29885.1| Exonuclease SbcC [Shewanella piezotolerans WP3] Length = 1022 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S F F Q +F L ++NG G GK++L +AI + YG T + Sbjct: 1 MRPIKLTMSAFGPFGGQQVTDFEALGVHPLFLINGPTGAGKTTLLDAICFALYGKTTGDE 60 Query: 83 HGDSIKKRSIK-----TPMPMCMAVPRCKYQLK 110 S + I T + A+ +Y+++ Sbjct: 61 REGSQMRCDIANDDVLTEVTFTFALADNQYRIR 93 >gi|146281233|ref|YP_001171386.1| exonuclease SbcC [Pseudomonas stutzeri A1501] gi|145569438|gb|ABP78544.1| exonuclease SbcC [Pseudomonas stutzeri A1501] Length = 1217 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L I + + Q I+F + L + G G GKS++ +A+ +G T R Sbjct: 1 MRILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR 60 >gi|302348755|ref|YP_003816393.1| DNA double-strand break repair rad50 ATPase [Acidilobus saccharovorans 345-15] gi|302329167|gb|ADL19362.1| DNA double-strand break repair rad50 ATPase [Acidilobus saccharovorans 345-15] Length = 912 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + F + KIE + GQNG GK+S+ EAI + R K + ++ Sbjct: 5 ISKLTLKDFLSHKD-TKIELPRGSIAIVGQNGAGKTSMFEAIYYALTTNGWRGKLSNLVR 63 Query: 89 KRSIKTPMPMCM 100 K + + + Sbjct: 64 TGISKAAVELVL 75 >gi|262403564|ref|ZP_06080122.1| exonuclease SbcC [Vibrio sp. RC586] gi|262350068|gb|EEY99203.1| exonuclease SbcC [Vibrio sp. RC586] Length = 1009 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + F F + I+F + L ++NG G GKSS+ +AI + YG T + Sbjct: 2 LTLQAFGPFAGREVIDFTELGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTGDQ 61 Query: 88 KKRSIKTP 95 + P Sbjct: 62 MRCDFADP 69 >gi|256844884|ref|ZP_05550342.1| nuclease sbcCD subunit C [Fusobacterium sp. 3_1_36A2] gi|256718443|gb|EEU31998.1| nuclease sbcCD subunit C [Fusobacterium sp. 3_1_36A2] Length = 921 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ ++R + I +EF + ++ G+NG GK+S+ EAI + + R Sbjct: 3 IKKVQLENYRSHSNIT-VEFTKGVNLILGKNGRGKTSILEAISTVMFNTKDRSGK 56 >gi|210614351|ref|ZP_03290170.1| hypothetical protein CLONEX_02384 [Clostridium nexile DSM 1787] gi|210150695|gb|EEA81704.1| hypothetical protein CLONEX_02384 [Clostridium nexile DSM 1787] Length = 365 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +FR + + IEF I G N GK+++ E+I + R + Sbjct: 3 VKSLKLKNFRNYN-LLNIEFDAATNIFCGDNAQGKTNILESIYLSGTTKSHRGTKDRDMI 61 Query: 89 KRSIK 93 + Sbjct: 62 QFGHD 66 >gi|15895343|ref|NP_348692.1| DNA repair protein recN, ATPase [Clostridium acetobutylicum ATCC 824] gi|15025061|gb|AAK80032.1|AE007710_2 DNA repair protein recN, ATPase [Clostridium acetobutylicum ATCC 824] gi|325509488|gb|ADZ21124.1| DNA repair protein recN, ATPase [Clostridium acetobutylicum EA 2018] Length = 570 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 LL + I +F E I F ++ G+ G GKS L +AI ++ G + R Sbjct: 2 LLQLNIKNF-ALIEDITINFEKGFNVLFGETGAGKSILIDAINYVLGGKSSRG 53 >gi|328948681|ref|YP_004366018.1| DNA repair protein RecN [Treponema succinifaciens DSM 2489] gi|328449005|gb|AEB14721.1| DNA repair protein RecN [Treponema succinifaciens DSM 2489] Length = 565 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +++I +F E IEF T+++G+ G GKS L ++ +L G + Sbjct: 2 LEELDIKNF-ALIESAHIEFEKGFTVLSGETGAGKSILIGSLAFLLGGKS 50 >gi|318080860|ref|ZP_07988192.1| exonuclease [Streptomyces sp. SA3_actF] Length = 132 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + ++ F F Q ++F L +++G G GK+SL +A+ + YG Sbjct: 1 MRLHRLTVTAFGPFAGTQTVDFDRLAEAGLFLLHGATGAGKTSLLDAVCYALYG 54 >gi|318061016|ref|ZP_07979737.1| exonuclease [Streptomyces sp. SA3_actG] Length = 312 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + ++ F F Q ++F L +++G G GK+SL +A+ + YG Sbjct: 1 MRLHRLTVTAFGPFAGTQTVDFDRLAEAGLFLLHGATGAGKTSLLDAVCYALYG 54 >gi|213410637|ref|XP_002176088.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212004135|gb|EEB09795.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 1202 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 35 SHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ + + IE + H +V G+NG GKS+ AI ++ Sbjct: 5 KGFKSYKDYTAIEPLSPHHNVVVGRNGSGKSNFFAAIRFVL 45 >gi|187920074|ref|YP_001889105.1| SMC domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718512|gb|ACD19735.1| SMC domain protein [Burkholderia phytofirmans PsJN] Length = 874 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGKLVIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|298710041|emb|CBJ31759.1| conserved unknown protein [Ectocarpus siliculosus] Length = 443 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +++ +F + + + + F L +V G NG GKS+L AI G + D++ Sbjct: 37 IVSLKMKNFLVYKDAKAV-FGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNL 94 >gi|296224444|ref|XP_002807609.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 6-like [Callithrix jacchus] Length = 1097 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G NG GKS++ A+ G G S+K Sbjct: 54 IESIRLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLK 113 >gi|261416459|ref|YP_003250142.1| DNA replication and repair protein RecF [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372915|gb|ACX75660.1| DNA replication and repair protein RecF [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327022|gb|ADL26223.1| putative DNA replication and repair protein recF [Fibrobacter succinogenes subsp. succinogenes S85] Length = 419 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + IS R E F + ++ G NG GK+++ E+I L G++ R Sbjct: 2 ISKVFISKMRSL-ESMDCNFEPGINVICGPNGCGKTTILESIYLLAQGFSFRS 53 >gi|251794040|ref|YP_003008771.1| DNA replication and repair protein RecF [Paenibacillus sp. JDR-2] gi|247541666|gb|ACS98684.1| DNA replication and repair protein RecF [Paenibacillus sp. JDR-2] Length = 369 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I++ ++R + E++ + + + + G N GK++L EAI L + R Sbjct: 1 MFLKSIQLQNYRNYKELELVT-DNKVNLFVGPNAQGKTNLLEAIFALALTKSHRTSKDKE 59 Query: 87 IKKRSIKTPM 96 + + Sbjct: 60 LIGWEADSAR 69 >gi|73542060|ref|YP_296580.1| hypothetical protein Reut_A2374 [Ralstonia eutropha JMP134] gi|72119473|gb|AAZ61736.1| hypothetical protein Reut_A2374 [Ralstonia eutropha JMP134] Length = 579 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I +F G I A ++++ G NG GKSS+ EA+ G + R Sbjct: 1 MRITAIHARNFLGIRAADIIT-ATPVSLICGPNGAGKSSVQEAVRMALTGESVR 53 >gi|330801344|ref|XP_003288688.1| hypothetical protein DICPUDRAFT_15107 [Dictyostelium purpureum] gi|325081251|gb|EGC34773.1| hypothetical protein DICPUDRAFT_15107 [Dictyostelium purpureum] Length = 1040 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 14/98 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYGY---- 77 ++ +I++++F G + ++ D + ++ GQ G GKS++ EA+ W YG Sbjct: 386 VQIQNIKVNNFCGISNELELNLKDEEMLNKMILIRGQMGTGKSTIFEALVWCLYGNTSPK 445 Query: 78 ----TQRRKHGDSIK-KRSIKTPMPMCMAVPRCKYQLK 110 + GD + S T + + + V YQ+K Sbjct: 446 KQSTSSSSIKGDEVINDSSNSTSVTVEVLVDSKLYQIK 483 >gi|312375099|gb|EFR22531.1| hypothetical protein AND_15064 [Anopheles darlingi] Length = 677 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + ++ F + + G NG GKS++ +++ ++F GY ++ I Sbjct: 74 IDKISNYNFKSYAGLVQLGPFHQRYSAIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKI 132 >gi|73539405|ref|YP_299772.1| exonuclease SbcC, putative [Ralstonia eutropha JMP134] gi|72122742|gb|AAZ64928.1| exonuclease SbcC, putative [Ralstonia eutropha JMP134] Length = 1020 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F F+ + I+F +++G G GK++L +A+ + YG T + Sbjct: 1 MRPLHLTMQAFGPFSGTEAIDFTRLGEQAFFLIHGPTGAGKTTLLDAVCFALYGDTSGGE 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RSAQAMRSANAAP 73 >gi|331269450|ref|YP_004395942.1| DNA repair protein RecN [Clostridium botulinum BKT015925] gi|329126000|gb|AEB75945.1| DNA repair protein RecN [Clostridium botulinum BKT015925] Length = 564 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G + Sbjct: 2 LLQLNIKNF-ALIEELTINFEKGFNVLTGETGAGKSILIDAINYVLGGKFNKGL 54 >gi|163744557|ref|ZP_02151917.1| hypothetical protein OIHEL45_03200 [Oceanibulbus indolifex HEL-45] gi|161381375|gb|EDQ05784.1| hypothetical protein OIHEL45_03200 [Oceanibulbus indolifex HEL-45] Length = 660 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + +S FR F + + A +T V G N GK++L A+ LF +R Sbjct: 1 MRIESVTLSGFRCFGPDPITVPIASEITAVVGPNAAGKTALLHALSKLFGVSRAQR 56 >gi|158319063|ref|YP_001511570.1| DNA replication and repair protein RecF [Alkaliphilus oremlandii OhILAs] gi|166918719|sp|A8MEA3|RECF_ALKOO RecName: Full=DNA replication and repair protein recF gi|158139262|gb|ABW17574.1| DNA replication and repair protein RecF [Alkaliphilus oremlandii OhILAs] Length = 365 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++++ ++R + E ++F L + G N GK++L E+I G + R H + Sbjct: 3 VEELKLINYRNY-EQMNLKFHPRLNVFIGDNAQGKTNLIESIYLCSAGKSFRTNHDQELI 61 Query: 89 KRSIKT 94 + K Sbjct: 62 NMNKKQ 67 >gi|209883687|ref|YP_002287544.1| DNA replication and repair protein RecF [Oligotropha carboxidovorans OM5] gi|209871883|gb|ACI91679.1| DNA replication and repair protein RecF [Oligotropha carboxidovorans OM5] Length = 382 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++L + ++ FR + + L ++ G NG GK++ EAI L G RR + I Sbjct: 5 RILRLSLTEFRSYHA-ASVRPQSDLVVLVGPNGAGKTNCLEAISLLAPGRGLRRARFEDI 63 Query: 88 KKRSIK 93 R+ Sbjct: 64 ANRAGD 69 >gi|167770841|ref|ZP_02442894.1| hypothetical protein ANACOL_02194 [Anaerotruncus colihominis DSM 17241] gi|167666881|gb|EDS11011.1| hypothetical protein ANACOL_02194 [Anaerotruncus colihominis DSM 17241] Length = 379 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I I+ FR ++ + ++ G NG GK++ EA+ + R Sbjct: 1 MRIDRIRITDFRNIASLE-LALCPGANVIYGDNGQGKTNFIEAVWMCTGAKSFRGAKDAQ 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRFGAPQ 67 >gi|149912810|ref|ZP_01901344.1| recombination protein F [Roseobacter sp. AzwK-3b] gi|149813216|gb|EDM73042.1| recombination protein F [Roseobacter sp. AzwK-3b] Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +SHFR +++ + G NG GK+++ EA+ G RR Sbjct: 4 LHISRLTLSHFRSHKG-ARLDVDARPVAIYGPNGAGKTNILEAVSLFSPGRGLRRAAAQD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MARR 66 >gi|153815426|ref|ZP_01968094.1| hypothetical protein RUMTOR_01661 [Ruminococcus torques ATCC 27756] gi|317500888|ref|ZP_07959100.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 8_1_57FAA] gi|331089210|ref|ZP_08338112.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 3_1_46FAA] gi|145847285|gb|EDK24203.1| hypothetical protein RUMTOR_01661 [Ruminococcus torques ATCC 27756] gi|316897768|gb|EFV19827.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 8_1_57FAA] gi|330405762|gb|EGG85291.1| DNA replication and repair protein recF [Lachnospiraceae bacterium 3_1_46FAA] Length = 362 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + ++ ++F I+ G N GK+++ EA+ + R Sbjct: 1 MVIKSLKLKNYRNY-DLLDLKFDPKTNILYGDNAQGKTNILEALYLSGTTKSHRGTKDRD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIQFGYD 66 >gi|87309167|ref|ZP_01091304.1| hypothetical protein DSM3645_05515 [Blastopirellula marina DSM 3645] gi|87288158|gb|EAQ80055.1| hypothetical protein DSM3645_05515 [Blastopirellula marina DSM 3645] Length = 1172 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ I+ +F FT + E D L I+ G N GKS+L + I +G+ R + Sbjct: 1 MKIKTIQAENFGLFTNR-RFELGDRLQIIYGPNEAGKSTLLQLIRETIFGFRVRNPY 56 >gi|255535750|ref|YP_003096121.1| DNA recombination and repair protein RecF [Flavobacteriaceae bacterium 3519-10] gi|255341946|gb|ACU08059.1| DNA recombination and repair protein RecF [Flavobacteriaceae bacterium 3519-10] Length = 359 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + +++ F+ + Q +EF+ + G NG GK+++ +A+ +L G + Sbjct: 1 MVIQKLQLIQFKNHS-QQTLEFSPQINCFVGNNGVGKTNVLDALHYLSVGKS 51 >gi|325570842|ref|ZP_08146525.1| exonuclease SbcC [Enterococcus casseliflavus ATCC 12755] gi|325156352|gb|EGC68534.1| exonuclease SbcC [Enterococcus casseliflavus ATCC 12755] Length = 1042 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ +F F + K++F+ L +++G+ G GK+++ + + + +G T Sbjct: 1 MQPKSLQMKNFGPFIDE-KLDFSQLQAGGLFLISGKTGAGKTTIFDGMTFALFGETSGNL 59 Query: 83 HGDSIKKRSIKTPMP 97 + +P Sbjct: 60 RSGKEMRSMFASPTE 74 >gi|299143459|ref|ZP_07036539.1| DNA replication and repair protein RecF [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517944|gb|EFI41683.1| DNA replication and repair protein RecF [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 361 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L++E+S+FR + + + ++ G+N GK++L EAI L G + R Sbjct: 1 MKILNLELSNFRNY-KYLYYNPKGQINVITGENAMGKTNLLEAIYVLTVGKSFRTVKDSE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LIQIGGEQ 67 >gi|262039510|ref|ZP_06012812.1| DNA replication and repair protein RecF [Leptotrichia goodfellowii F0264] gi|261746491|gb|EEY34028.1| DNA replication and repair protein RecF [Leptotrichia goodfellowii F0264] Length = 364 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + S+FR E K E + ++ G+NG GK+S EA+ +L G + R K Sbjct: 1 MYLKQLSYSNFRCL-EDTKTELDRNFNLIYGKNGQGKTSFIEAVHFLATGKSFRTKKTKE 59 Query: 87 IKK 89 + + Sbjct: 60 LFR 62 >gi|257867845|ref|ZP_05647498.1| exonuclease SbcC [Enterococcus casseliflavus EC30] gi|257874173|ref|ZP_05653826.1| exonuclease SbcC [Enterococcus casseliflavus EC10] gi|257801928|gb|EEV30831.1| exonuclease SbcC [Enterococcus casseliflavus EC30] gi|257808337|gb|EEV37159.1| exonuclease SbcC [Enterococcus casseliflavus EC10] Length = 1042 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ +F F + K++F+ L +++G+ G GK+++ + + + +G T Sbjct: 1 MQPKSLQMKNFGPFIDE-KLDFSQLQAGGLFLISGKTGAGKTTIFDGMTFALFGETSGNL 59 Query: 83 HGDSIKKRSIKTPMP 97 + +P Sbjct: 60 RSGKEMRSMFASPTE 74 >gi|241762645|ref|ZP_04760717.1| SMC domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372783|gb|EER62495.1| SMC domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 468 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE----WLFYGYTQRRKHGD 85 I I +FRG + +F + + ++ G NG GK+S+ ++I WL + G Sbjct: 11 KKISIKNFRGI-QNADFDFCNKVNLIVGINGAGKTSVLDSIALLLSWLINRTLNKNSSGQ 69 Query: 86 SIKKRSIK 93 I SI+ Sbjct: 70 PINDLSIR 77 >gi|148652906|ref|YP_001279999.1| SMC domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571990|gb|ABQ94049.1| SMC domain protein [Psychrobacter sp. PRwf-1] Length = 1346 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L+++ + + +I+F+D + + G G GK+++ +AI YG T R Sbjct: 1 MRLIELRLKNLNSLKGEWRIDFSDEAYINEGIFAIIGHTGAGKTTILDAICLALYGETPR 60 >gi|71028802|ref|XP_764044.1| condensin subunit [Theileria parva strain Muguga] gi|68350998|gb|EAN31761.1| condensin subunit, putative [Theileria parva] Length = 1246 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + + F+ ++ I H V G NG GKS++ +++ ++F + Sbjct: 1 MFIEYVILDGFKSYSTRTVIGPLDPHFNAVTGLNGSGKSNVLDSLCFVFGISDLSTVRAN 60 Query: 86 SIKKRSIKT 94 + + K Sbjct: 61 KLDELIYKQ 69 >gi|326802597|ref|YP_004320416.1| DNA replication and repair protein recF [Sphingobacterium sp. 21] gi|326553361|gb|ADZ81746.1| DNA replication and repair protein recF [Sphingobacterium sp. 21] Length = 365 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++ + +F+ + E + FA + G NG GK+++ +A+ +L Sbjct: 1 MWVKELTVINFKNY-EEASLTFAPGVNAFTGDNGAGKTNILDALHYL 46 >gi|298490236|ref|YP_003720413.1| hypothetical protein Aazo_0883 ['Nostoc azollae' 0708] gi|298232154|gb|ADI63290.1| hypothetical protein Aazo_0883 ['Nostoc azollae' 0708] Length = 79 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ ++ + +FRGF E+ K++ L + G NG GKSS+ + I Sbjct: 1 MRIEELHLQNFRGFREL-KLDLPPDLAVFIGVNGSGKSSILDRI 43 >gi|182436467|ref|YP_001824186.1| hypothetical protein SGR_2674 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464983|dbj|BAG19503.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 472 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L IE+ F+ I+F T + G+NG GKS++ +AI++L Sbjct: 2 LTRIEVHGFKNLL-NLSIDFGP-FTCIAGENGTGKSNVFDAIQFL 44 >gi|169824647|ref|YP_001692258.1| hypothetical protein FMG_0950 [Finegoldia magna ATCC 29328] gi|167831452|dbj|BAG08368.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length = 542 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I +F+ F + +++ + I+ G N GKS++ EAI G+ G+ I Sbjct: 2 IKKVRIKNFKCFKDWFELDLNGGINILVGNNEEGKSTILEAIHLALTGF----YRGNYIN 57 Query: 89 K 89 + Sbjct: 58 R 58 >gi|81427620|ref|YP_394617.1| recombination protein F [Lactobacillus sakei subsp. sakei 23K] gi|97180789|sp|Q38ZS1|RECF_LACSS RecName: Full=DNA replication and repair protein recF gi|78609259|emb|CAI54306.1| DNA repair and recombination protein RecF (Recombinational DNA repair ATPase) [Lactobacillus sakei subsp. sakei 23K] Length = 375 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++++H+R + E + F+ ++ G+N GK++L EAI L + R Sbjct: 1 MYLSELQLNHYRNY-ESVDVHFSPDTNVLIGENAQGKTNLLEAIYVLALARSHR 53 >gi|150014896|ref|YP_001307150.1| recombination protein F [Clostridium beijerinckii NCIMB 8052] gi|189039620|sp|A6LPB4|RECF_CLOB8 RecName: Full=DNA replication and repair protein recF gi|149901361|gb|ABR32194.1| DNA replication and repair protein RecF [Clostridium beijerinckii NCIMB 8052] Length = 367 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + ++R + + +E +++ + G N GK+++ E++ + + + R Sbjct: 1 MYVKNINLLNYRNY-KKLSVELTENVNVFVGDNAQGKTNILESVYYCAFAKSHRTSKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|115524490|ref|YP_781401.1| SMC domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518437|gb|ABJ06421.1| SMC domain protein [Rhodopseudomonas palustris BisA53] Length = 827 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 L + + FR + + +F+ V NG GKSS+ +A+E++F Sbjct: 7 LQSLGLVGFRAYLQPMTFDFSKKRCLAVFAPNGSGKSSVIDALEFVF 53 >gi|269216528|ref|ZP_06160382.1| DNA replication and repair protein RecF [Slackia exigua ATCC 700122] gi|269130057|gb|EEZ61139.1| DNA replication and repair protein RecF [Slackia exigua ATCC 700122] Length = 379 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +FR + + ++ D LT+ G N GKS++ EAI+ + T R Sbjct: 3 LHIQSFSLRNFRNYRSFE-MDDVDPLTMFIGPNATGKSNVLEAIQLVTSATTFRGAKSRE 61 Query: 87 IKKRSIK 93 + + Sbjct: 62 MIRWGCD 68 >gi|184200656|ref|YP_001854863.1| nuclease SbcCD subunit C [Kocuria rhizophila DC2201] gi|183580886|dbj|BAG29357.1| nuclease SbcCD subunit C [Kocuria rhizophila DC2201] Length = 1079 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L +EI+ F F + ++F + ++NG+ G GK+S+ +AI + YG Sbjct: 1 MRLHRMEITAFGPFAGQEVVDFEGLNRAGVFLLNGETGSGKTSVLDAICFALYGT 55 >gi|158321310|ref|YP_001513817.1| SMC domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141509|gb|ABW19821.1| SMC domain protein [Alkaliphilus oremlandii OhILAs] Length = 1174 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++I F Q I F L + G G GKSS+ +AI YG R Sbjct: 1 MRPSLLKIKGINSFHNEQIINFNRLVEKGLFGIFGPTGSGKSSILDAITLALYGNIAR 58 >gi|330889441|gb|EGH22102.1| hypothetical protein PSYMO_11565 [Pseudomonas syringae pv. mori str. 301020] Length = 932 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 29 LLDIEISHFRGFTE------IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + +FRGF E I F+ I NG GKSSL EAIE G + Sbjct: 59 LDYLRVRNFRGFGEFGADDKGTFIRFSKLKNIFYAPNGGGKSSLCEAIEICTTGDIKEAA 118 Query: 83 H 83 Sbjct: 119 R 119 >gi|312069949|ref|XP_003137920.1| rad50 family protein [Loa loa] gi|307766915|gb|EFO26149.1| rad50 family protein [Loa loa] Length = 1364 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +E+ R IEF LTI+ G NG GK+++ EA++++ G + Sbjct: 84 LDTVELQGIRSVGVGPQNANVIEFLSPLTIICGTNGAGKTTIIEALKYVTTGELPKG 140 >gi|301609962|ref|XP_002934524.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Xenopus (Silurana) tropicalis] Length = 1125 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + F ++ V G NG GKS++ A+ G G +IK Sbjct: 87 IESISLRNFMCHSMLGPFRFGPNVNFVVGNNGSGKSAILTALIVGLGGKAAFTNRGSTIK 146 >gi|227538090|ref|ZP_03968139.1| possible ATPase involved in DNA repair [Sphingobacterium spiritivorum ATCC 33300] gi|227242166|gb|EEI92181.1| possible ATPase involved in DNA repair [Sphingobacterium spiritivorum ATCC 33300] Length = 428 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I + E Q+I+F L + G G GKSS+ EAI + YG T+R Sbjct: 6 LSIEGLYSYQEKQEIDFTKLTEAGLFGIFGNVGSGKSSILEAISFALYGNTER 58 >gi|254452396|ref|ZP_05065833.1| hypothetical protein OA238_3011 [Octadecabacter antarcticus 238] gi|198266802|gb|EDY91072.1| hypothetical protein OA238_3011 [Octadecabacter antarcticus 238] Length = 880 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQKI--EFADHLTIVNGQNGYGKSSLSE---AIEWLFYGYTQRR 81 KL +E+++ R F + + F D LT + +N GKS+ + A+ ++ +G + + Sbjct: 1 MKLRQLELTNVRRFGGQKAVLGPFGDGLTTITAENESGKSTFLDALHALFFVPHGSSSQE 60 Query: 82 KH 83 Sbjct: 61 VK 62 >gi|159184149|ref|NP_353107.2| recombination protein F [Agrobacterium tumefaciens str. C58] gi|159139484|gb|AAK85892.2| recF-like protein [Agrobacterium tumefaciens str. C58] Length = 375 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + + H+ ++ G NG GK++L EA+ +L G RR Sbjct: 5 VSLSRLKLTDFRNYAAAALVLDERHV-VLTGDNGSGKTNLLEAVSFLSPGRGLRRAVLSD 63 Query: 87 IKKRSIK 93 + + + Sbjct: 64 VTRVGAE 70 >gi|25453250|sp|Q8UJ65|RECF_AGRT5 RecName: Full=DNA replication and repair protein recF Length = 376 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + + H+ ++ G NG GK++L EA+ +L G RR Sbjct: 6 VSLSRLKLTDFRNYAAAALVLDERHV-VLTGDNGSGKTNLLEAVSFLSPGRGLRRAVLSD 64 Query: 87 IKKRSIK 93 + + + Sbjct: 65 VTRVGAE 71 >gi|332531078|ref|ZP_08406995.1| hypothetical protein HGR_14019 [Hylemonella gracilis ATCC 19624] gi|332039463|gb|EGI75872.1| hypothetical protein HGR_14019 [Hylemonella gracilis ATCC 19624] Length = 562 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 KL +I + +FR Q++ +T+V G N GK++L AI+ LF G Sbjct: 1 MKLAEIRVRNFRSIETEQRLPIPGSMTLV-GPNNSGKTNLLRAIQLLFTGQA 51 >gi|327479387|gb|AEA82697.1| exonuclease SbcC [Pseudomonas stutzeri DSM 4166] Length = 1217 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q I+F + L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR 60 >gi|325567638|ref|ZP_08144305.1| recombination protein F [Enterococcus casseliflavus ATCC 12755] gi|325159071|gb|EGC71217.1| recombination protein F [Enterococcus casseliflavus ATCC 12755] Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ +S++R + + + F L I G+N GK+++ E+I L + R Sbjct: 1 MRLNELHLSNYRNY-DSLTLTFEKGLVIFLGENAQGKTNILESIYVLAMTKSHRTSSEQE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|297526734|ref|YP_003668758.1| SMC domain protein [Staphylothermus hellenicus DSM 12710] gi|297255650|gb|ADI31859.1| SMC domain protein [Staphylothermus hellenicus DSM 12710] Length = 832 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L + + + R +T+ + +T++ G G GKS++ +I + +G + R D ++ Sbjct: 3 ILGLRLKNIRSYTDKTIVFPRKGITVIYGDVGTGKSTILSSIAYALFGQPRSRI-PDPME 61 Query: 89 KRSI 92 + + Sbjct: 62 RYAY 65 >gi|257875896|ref|ZP_05655549.1| recombination protein F [Enterococcus casseliflavus EC20] gi|257810062|gb|EEV38882.1| recombination protein F [Enterococcus casseliflavus EC20] Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ +S++R + + + F L I G+N GK+++ E+I L + R Sbjct: 1 MRLNELHLSNYRNY-DSLTLTFEKGLVIFLGENAQGKTNILESIYVLAMTKSHRTSSEQE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|257866279|ref|ZP_05645932.1| recombination protein F [Enterococcus casseliflavus EC30] gi|257873205|ref|ZP_05652858.1| recombination protein F [Enterococcus casseliflavus EC10] gi|257800237|gb|EEV29265.1| recombination protein F [Enterococcus casseliflavus EC30] gi|257807369|gb|EEV36191.1| recombination protein F [Enterococcus casseliflavus EC10] Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ +S++R + + + F L I G+N GK+++ E+I L + R Sbjct: 1 MRLNELHLSNYRNY-DSLTLTFEKGLVIFLGENAQGKTNILESIYVLAMTKSHRTSSEQE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|212637201|ref|YP_002313726.1| ATPase [Shewanella piezotolerans WP3] gi|212558685|gb|ACJ31139.1| ATPase [Shewanella piezotolerans WP3] Length = 433 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +++++FR F + + ++F LT++ +NG GKSS+ +A+ Sbjct: 3 IDTLKLTNFRSFEDFE-LQFDPRLTVLIARNGAGKSSVLDAV 43 >gi|213405963|ref|XP_002173753.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212001800|gb|EEB07460.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 1137 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +F + K++F + + G NG GKS++ + G ++K Sbjct: 97 LQSIHLINFMCH-DALKLDFGPRINFIIGHNGSGKSAILTGLVVCLGAKAASTNRGANLK 155 >gi|118083143|ref|XP_416467.2| PREDICTED: similar to OTTHUMP00000028953 [Gallus gallus] Length = 1243 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + + F+ + Q I + G NG GKS++ +A+ ++ Sbjct: 12 YLKLLMVKDFKSWRGEQLIGPFMRFNCIIGPNGSGKSNIMDAVSFVL 58 >gi|310658057|ref|YP_003935778.1| nuclease sbccd subunit c [Clostridium sticklandii DSM 519] gi|308824835|emb|CBH20873.1| putative Nuclease sbcCD subunit C [Clostridium sticklandii] Length = 1168 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + I F E Q I+F + + G G GKS++ + I YG R K Sbjct: 1 MKPISLTIKGLNSFEEEQHIDFLKLTQNGFFGIFGPTGSGKSTILDGICLALYGDIPRGK 60 >gi|260103275|ref|ZP_05753512.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260082916|gb|EEW67036.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 495 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F+ I FA + + G N GK+++ A+++L G + Sbjct: 1 MYIKKMVLHNFKSFSSNNSEDEDIEIPFASGVNYLVGNNNVGKTTILNALDFLTTGGKKE 60 Query: 81 RK 82 Sbjct: 61 NV 62 >gi|253987486|ref|YP_003038842.1| recombination protein F [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253778936|emb|CAQ82096.1| dna replication and repair protein recf [Photorhabdus asymbiotica] Length = 363 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR + + A + G NG GK+S+ EAI L +G + R Sbjct: 1 MTLTRLFIRDFRNIAD-ADLPLATGFNFLVGPNGSGKTSVLEAIYTLGHGRSFRSIQSGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|218533337|ref|YP_002424152.1| hypothetical protein Mchl_5480 [Methylobacterium chloromethanicum CM4] gi|218525640|gb|ACK86224.1| hypothetical protein Mchl_5480 [Methylobacterium chloromethanicum CM4] Length = 1304 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 10/68 (14%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG----------DSIKKRSIKTP 95 E + +T++ G NG GK+S+ A+ W G+ R + + + T Sbjct: 124 FEPSKGITLLEGVNGSGKTSIVNAVVWCLTGHLIRSQRAPEQGPTEFPCEIARDGGGDTT 183 Query: 96 MPMCMAVP 103 PM P Sbjct: 184 HPMSAITP 191 >gi|221135257|ref|ZP_03561560.1| Recombinational DNA repair ATPase [Glaciecola sp. HTCC2999] Length = 366 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++IS FR + HL +V GQNG GKSS E++ +L +G + R Sbjct: 1 MKLDKVQISQFRNIESATIYP-SAHLNVVIGQNGSGKSSFLESLHYLGFGRSFRTNKHRH 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 VIQSGLSQ 67 >gi|10956553|ref|NP_052196.1| hypothetical protein pLH1_p08 [Lactobacillus helveticus] gi|2687741|emb|CAA10967.1| hypothetical protein [Lactobacillus helveticus] Length = 495 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F+ I FA + + G N GK+++ A+++L G + Sbjct: 1 MYIKKMVLHNFKSFSSNNSEDEDIEIPFASGVNYLVGNNNVGKTTILNALDFLTTGGKKE 60 Query: 81 RK 82 Sbjct: 61 NV 62 >gi|241667201|ref|ZP_04754779.1| DNA repair protein RecN [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875753|ref|ZP_05248463.1| DNA repair protein recN [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841774|gb|EET20188.1| DNA repair protein recN [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 549 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ D Sbjct: 2 LQHLAIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQD 57 >gi|309388285|gb|ADO76165.1| DNA replication and repair protein RecF [Halanaerobium praevalens DSM 2228] Length = 374 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR F E+ ++ +L I G NG GK++ E+I + + R Sbjct: 1 MYLERVLCRNFRNFKELM-LDLNPNLNIFLGANGQGKTNFLESIYLMATANSHRSSISSE 59 Query: 87 IKKRSI 92 + Sbjct: 60 MINWQQ 65 >gi|182417321|ref|ZP_02948660.1| DNA repair protein RecN [Clostridium butyricum 5521] gi|237668188|ref|ZP_04528172.1| DNA repair protein RecN [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378829|gb|EDT76348.1| DNA repair protein RecN [Clostridium butyricum 5521] gi|237656536|gb|EEP54092.1| DNA repair protein RecN [Clostridium butyricum E4 str. BoNT E BL5262] Length = 562 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I +F E I F + I++G+ G GKS + +AI+++ G + Sbjct: 2 LIQLNIKNF-ALIEEMTINFKEGFNILSGETGAGKSIMIDAIDFVLGGKFSKSL 54 >gi|322830736|ref|YP_004210763.1| DNA replication and repair protein RecF [Rahnella sp. Y9602] gi|321165937|gb|ADW71636.1| DNA replication and repair protein RecF [Rahnella sp. Y9602] Length = 362 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E ++ + + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLDPSPGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|269140082|ref|YP_003296783.1| recombination and repair protein [Edwardsiella tarda EIB202] gi|267985743|gb|ACY85572.1| recombination and repair protein [Edwardsiella tarda EIB202] gi|304559909|gb|ADM42573.1| DNA repair protein RecN [Edwardsiella tarda FL6-60] Length = 553 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +S+F E++ ++F +T + G+ G GKS +A+ G ++ ++ Sbjct: 2 LTQLTVSNFAIVRELE-VDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMP 60 Query: 89 KRSI 92 + I Sbjct: 61 RADI 64 >gi|150015867|ref|YP_001308121.1| SMC domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902332|gb|ABR33165.1| SMC domain protein [Clostridium beijerinckii NCIMB 8052] Length = 1163 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + I F + Q I+F + G G GKS++ + I YG R+ Sbjct: 1 MRPIKLRIKGLNSFMDEQIIDFDKLTDRGFFGIFGPTGSGKSTILDGITLALYGNVSRK 59 >gi|332188891|ref|ZP_08390596.1| DNA replication and repair RecF family protein [Sphingomonas sp. S17] gi|332011073|gb|EGI53173.1| DNA replication and repair RecF family protein [Sphingomonas sp. S17] Length = 347 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ FR ++ + ++ G+NG GK+++ EA+ L G RR ++ Sbjct: 2 LTRLVLTDFRNHADLA-LNPGAGFVVLTGENGAGKTNVLEAVSLLAPGRGLRRAALSAMA 60 Query: 89 KRSIK 93 ++ K Sbjct: 61 RQGGK 65 >gi|308160495|gb|EFO62982.1| SMC1 beta-like protein [Giardia lamblia P15] Length = 1353 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + L + + +F+ F I L+ + G NG GK+++ +AI + Sbjct: 3 YNLSAVRMFNFKTFVGEHSITDIPRLSFIVGPNGSGKTNIYDAILFA 49 >gi|296534947|ref|ZP_06897248.1| nuclease sbcCD subunit C [Roseomonas cervicalis ATCC 49957] gi|296264726|gb|EFH11050.1| nuclease sbcCD subunit C [Roseomonas cervicalis ATCC 49957] Length = 275 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 9/93 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + +S F + Q+ +FA L +++G G GK++L +A+ + +G + + Sbjct: 40 MRPLALRLSAFGAYAGAQEFDFAALGAQRLFLIHGPTGAGKTTLLDALCYALFGESSGAE 99 Query: 83 HGDSIKKRSIKTP-----MPMCMAVPRCKYQLK 110 + P + + A+ +Y+++ Sbjct: 100 RDAQHLRSHHAEPGAASWVELDFALGATRYRIR 132 >gi|28379016|ref|NP_785908.1| prophage Lp2 protein 4 [Lactobacillus plantarum WCFS1] gi|28271854|emb|CAD64759.1| prophage Lp2 protein 4 [Lactobacillus plantarum WCFS1] Length = 582 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+I+ FR F+E+ +I+ +T+++G NG GKSS+ I G + R +G + Sbjct: 5 IDKIKINKFRKFSELGQIQLGHRITVLSGHNGVGKSSIMSLIS-STVGQNKVRLNGSKFQ 63 >gi|332559821|ref|ZP_08414143.1| recombination protein F [Rhodobacter sphaeroides WS8N] gi|332277533|gb|EGJ22848.1| recombination protein F [Rhodobacter sphaeroides WS8N] Length = 363 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F G NG GK++L EAI L G RR D I Sbjct: 6 VTSLALSHFRSHRA-ARMAFDGRPVAFVGANGAGKTNLLEAISLLSPGRGLRRAAADEIA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|312198966|ref|YP_004019027.1| hypothetical protein FraEuI1c_5168 [Frankia sp. EuI1c] gi|311230302|gb|ADP83157.1| hypothetical protein FraEuI1c_5168 [Frankia sp. EuI1c] Length = 435 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + +S FR ++ +E D LT++ G N GKS+L + +L G R + Sbjct: 1 MRLEKVRLSGFRSLRDLT-LELGD-LTVITGPNNAGKSNLLAGLAFL--GDVYARGLDAA 56 Query: 87 IKKRS 91 ++ Sbjct: 57 MQTAG 61 >gi|255524162|ref|ZP_05391122.1| DNA repair protein RecN [Clostridium carboxidivorans P7] gi|296186620|ref|ZP_06855022.1| DNA repair protein RecN [Clostridium carboxidivorans P7] gi|255512147|gb|EET88427.1| DNA repair protein RecN [Clostridium carboxidivorans P7] gi|296048657|gb|EFG88089.1| DNA repair protein RecN [Clostridium carboxidivorans P7] Length = 566 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I +F E I F D +++G+ G GKS + +AI ++ + + D I+ Sbjct: 2 LLQLNIKNF-ALIENLSISFDDGFNVLSGETGAGKSIIIDAINYVLGS----KFNKDLIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 KT + + CK Sbjct: 57 TGENKTFVEAIFTLTNCK 74 >gi|253682322|ref|ZP_04863119.1| DNA repair protein RecN [Clostridium botulinum D str. 1873] gi|253562034|gb|EES91486.1| DNA repair protein RecN [Clostridium botulinum D str. 1873] Length = 564 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G + Sbjct: 2 LLQLNIKNF-ALIEELTINFEKGFNVLTGETGAGKSILIDAINYVLGGKFNKGL 54 >gi|256422037|ref|YP_003122690.1| hypothetical protein Cpin_3013 [Chitinophaga pinensis DSM 2588] gi|256036945|gb|ACU60489.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588] Length = 520 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I++ +F+ F ++ IEF D L ++ G N GKSS+ AI+ + G + Sbjct: 4 IKKIKLLNFKRFPSLE-IEFQDDLNLLIGDNEAGKSSILSAIDLVLSGSHSK 54 >gi|221640843|ref|YP_002527105.1| recombination protein F [Rhodobacter sphaeroides KD131] gi|221161624|gb|ACM02604.1| DNA replication and repair protein recF [Rhodobacter sphaeroides KD131] Length = 363 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F G NG GK++L EAI L G RR D I Sbjct: 6 VTSLALSHFRSHRA-ARMAFDGRPVAFVGANGAGKTNLLEAISLLSPGRGLRRAAADEIA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|89052494|ref|YP_507945.1| recombination protein F [Jannaschia sp. CCS1] gi|88862043|gb|ABD52920.1| DNA replication and repair protein RecF [Jannaschia sp. CCS1] Length = 375 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +SHFR ++E + G NG GK++L EA+ L G RR + Sbjct: 14 VFVSSLALSHFRSHR-RARMELDGRPVALFGPNGAGKTNLMEAVSLLSPGRGLRRAAAEE 72 Query: 87 IKKR 90 I +R Sbjct: 73 IIRR 76 >gi|13959485|sp|Q9KHU6|RECF_ACHLA RecName: Full=DNA replication and repair protein recF gi|8515413|gb|AAF75988.1|AF248639_7 RecF [Acholeplasma laidlawii PG-8A] Length = 349 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +FR E K+ L I+ G NG GK+S+ E+I + + R + Sbjct: 2 ITSIELRNFRNL-ENYKVLINRPLVIIQGLNGVGKTSILESIYFAATTKSHRSSVEKDMI 60 Query: 89 K 89 + Sbjct: 61 Q 61 >gi|126460791|ref|YP_001041905.1| recombination protein F [Rhodobacter sphaeroides ATCC 17029] gi|126102455|gb|ABN75133.1| DNA replication and repair protein RecF [Rhodobacter sphaeroides ATCC 17029] Length = 363 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F G NG GK++L EAI L G RR D I Sbjct: 6 VTSLALSHFRSHRA-ARMAFDGRPVAFVGANGAGKTNLLEAISLLSPGRGLRRAAADEIA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|254166847|ref|ZP_04873701.1| hypothetical protein ABOONEI_1939 [Aciduliprofundum boonei T469] gi|289596530|ref|YP_003483226.1| SMC domain protein [Aciduliprofundum boonei T469] gi|197624457|gb|EDY37018.1| hypothetical protein ABOONEI_1939 [Aciduliprofundum boonei T469] gi|289534317|gb|ADD08664.1| SMC domain protein [Aciduliprofundum boonei T469] Length = 802 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + + R + E Q IE +T+ G G GK+++ AI++ +G + + ++ Sbjct: 3 IRKIHLHNIRSY-EDQDIELGKGITLFEGDIGSGKTTILMAIDFALFGNSTPDFYRSLLR 61 Query: 89 K 89 K Sbjct: 62 K 62 >gi|121595344|ref|YP_987240.1| SMC domain-containing protein [Acidovorax sp. JS42] gi|120607424|gb|ABM43164.1| SMC domain protein [Acidovorax sp. JS42] Length = 406 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + + +FRG+T ++ I LT++ G+NG GK++L +AI Sbjct: 1 MRLQRLTLENFRGYTCLE-IGLGARLTLLLGENGAGKTTLLDAIAIGLGE 49 >gi|288916708|ref|ZP_06411083.1| DNA replication and repair protein RecF [Frankia sp. EUN1f] gi|288351963|gb|EFC86165.1| DNA replication and repair protein RecF [Frankia sp. EUN1f] Length = 433 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + + + +T G NG GK++L EAI ++ + R Sbjct: 1 MHLTHLSLTDFRSYPRLDLV-LEPGVTTFVGSNGQGKTNLIEAIGFVATLGSHRVATDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVREGTTQ 67 >gi|295699582|ref|YP_003607475.1| SMC domain protein [Burkholderia sp. CCGE1002] gi|295438795|gb|ADG17964.1| SMC domain protein [Burkholderia sp. CCGE1002] Length = 873 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I FR F I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQRIAIQEFRQFGGQIVIDDLQPGLNLFVGPNEAGKSTIAEAVRTVFLERYKASHLKD 60 >gi|256379295|ref|YP_003102955.1| hypothetical protein Amir_5288 [Actinosynnema mirum DSM 43827] gi|255923598|gb|ACU39109.1| SMC domain protein [Actinosynnema mirum DSM 43827] Length = 610 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + I FR E++ I TI+ G N GKSS +A+++L Y+ Sbjct: 1 MHLANFSIRGFRSLAEVEDIPIGSP-TILAGPNDGGKSSALDAVKFLLGRYS 51 >gi|269859424|ref|XP_002649437.1| chromosome segregation protein cut14 [Enterocytozoon bieneusi H348] gi|220067200|gb|EED44667.1| chromosome segregation protein cut14 [Enterocytozoon bieneusi H348] Length = 935 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +I + F+ + E + + G NG GKS+ +AI + + + Sbjct: 1 MFIKEIIMDGFKCYEEKTIMSNLDRFFNAIKGMNGVGKSNFIDAIIFCLNLDSIKSMRIS 60 Query: 86 SI 87 SI Sbjct: 61 SI 62 >gi|162449957|ref|YP_001612324.1| hypothetical protein sce1686 [Sorangium cellulosum 'So ce 56'] gi|161160539|emb|CAN91844.1| hypothetical protein sce1686 [Sorangium cellulosum 'So ce 56'] Length = 427 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + + FR F + + FA LTI+ G N GKSS+ +A+ Sbjct: 2 LRSVLLEGFRSFEQPTAVRFAP-LTILAGPNNAGKSSVIQAL 42 >gi|66391264|ref|YP_238589.1| ORF009 [Staphylococcus phage Twort] gi|62637194|gb|AAX92305.1| ORF009 [Staphylococcus phage Twort] Length = 636 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYG 76 + K +EI +F + L ++ G NG GKS+L AI + YG Sbjct: 1 MVKFKKVEIKNFMSIKDATLELDNQGLILIEGINKTNDSFEANGVGKSTLVSAITYSLYG 60 Query: 77 YTQRRKHGDSIKKRSIK 93 T++ D + + K Sbjct: 61 KTEKGLKADDVINKKEK 77 >gi|83591343|ref|YP_425095.1| recombination protein F [Rhodospirillum rubrum ATCC 11170] gi|83574257|gb|ABC20808.1| RecF protein [Rhodospirillum rubrum ATCC 11170] Length = 375 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + ++ FR + + +++ ++ G NG GK++L EA+ +L G RR Sbjct: 2 VERLTLTAFRCY-DRLRLDVGPRPLVLTGPNGAGKTNLLEALSFLAPGRGLRR 53 >gi|51893444|ref|YP_076135.1| hypothetical protein STH2306 [Symbiobacterium thermophilum IAM 14863] gi|51857133|dbj|BAD41291.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 1220 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ F + F L ++ N GKS+L + + YG D Sbjct: 10 HSVSLTGFGPYARKVTYTFPAGLGVLVAPNESGKSTLVAGLMAVLYGLPASSSPDD 65 >gi|302390801|ref|YP_003826621.1| DNA replication and repair protein RecF [Acetohalobium arabaticum DSM 5501] gi|302202878|gb|ADL11556.1| DNA replication and repair protein RecF [Acetohalobium arabaticum DSM 5501] Length = 374 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + +FR + ++ ++ +L I G N GK+++ EAI L G + R Sbjct: 1 MYLTNLFLKNFRNYHTLE-LKLNRNLNIFIGDNAEGKTNILEAIYLLSTGDSHRTNITSE 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 MVNWQQDS 67 >gi|296155961|ref|ZP_06838800.1| SMC domain protein [Burkholderia sp. Ch1-1] gi|295893467|gb|EFG73246.1| SMC domain protein [Burkholderia sp. Ch1-1] Length = 874 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGRLVIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|291520970|emb|CBK79263.1| ATPase involved in DNA repair [Coprococcus catus GD/7] Length = 1082 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K + + + F + + I+F +L ++ G G GK+++ +AI + YG Sbjct: 1 MKPIQLTMQAFGSYGKKTVIDFTKPDQNLFLITGDTGSGKTTIFDAIVFALYG 53 >gi|317154843|ref|YP_004122891.1| SMC domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316945094|gb|ADU64145.1| SMC domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 395 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +FR F + ++ G NG GKS+ + I + Q Sbjct: 1 MKIEQIHIRNFRAFR-KVTFKDLPSFCVLLGPNGSGKSTFFDVIGF-LKDSLQHNVRQAL 58 Query: 87 IKKRSIK 93 K+ K Sbjct: 59 QKRGGFK 65 >gi|257417429|ref|ZP_05594423.1| RecF protein [Enterococcus faecalis AR01/DG] gi|257159257|gb|EEU89217.1| RecF protein [Enterococcus faecalis ARO1/DG] Length = 375 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IKKRSIKTPM 96 + T Sbjct: 60 LIGWEQATAK 69 >gi|291613967|ref|YP_003524124.1| SMC domain protein [Sideroxydans lithotrophicus ES-1] gi|291584079|gb|ADE11737.1| SMC domain protein [Sideroxydans lithotrophicus ES-1] Length = 921 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F+L+++E H+ + K+ + ++G NG GK++L +A+ L +++R + Sbjct: 1 MFRLMELETVHW-DYWRNFKLPLDAPIITISGPNGSGKTTLLDAMRTLLALECSKKRDYK 59 Query: 85 DSIKKRSIK 93 +++ Sbjct: 60 RYVRRNGED 68 >gi|297564014|ref|YP_003682987.1| SMC domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848463|gb|ADH70481.1| SMC domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 676 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 28 KLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L I + FRG ++ F LT++ G+NG GKSS +EA E G R D Sbjct: 68 YLTGIRVQGFRGIGRPAELTFDAGPGLTVIVGRNGSGKSSFAEAAEAALTG---RNPRWD 124 Query: 86 SI 87 S+ Sbjct: 125 SM 126 >gi|226292658|gb|EEH48078.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1278 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSS 65 KL+ +E+ +F+ + + F D T + G NG GKS+ Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSN 41 >gi|91778862|ref|YP_554070.1| putative GTP-binding protein [Burkholderia xenovorans LB400] gi|91691522|gb|ABE34720.1| putative GTP-binding protein [Burkholderia xenovorans LB400] Length = 874 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGRLVIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|312880702|ref|ZP_07740502.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260] gi|310783993|gb|EFQ24391.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260] Length = 421 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 11/80 (13%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWL-------FYGY 77 + ++ ++I +F+ + +HLT + G NG GKS+L +A+++L GY Sbjct: 1 MLRIRRLQIHNFKSL---VHFDLPMEHLTGLIGLNGAGKSTLLQALDFLCQLFRGDLEGY 57 Query: 78 TQRRKHGDSIKKRSIKTPMP 97 RR S + P+P Sbjct: 58 LSRRGWKLSDLRSRTAEPLP 77 >gi|256419156|ref|YP_003119809.1| SMC domain protein [Chitinophaga pinensis DSM 2588] gi|256034064|gb|ACU57608.1| SMC domain protein [Chitinophaga pinensis DSM 2588] Length = 543 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ +++ +F+ F+++ +I + L ++ G NG GKSS+ +A ++L Sbjct: 1 MRITKLKLRNFKRFSDLTIDQIPTSSKLVLLIGANGSGKSSVFDAFDFL 49 >gi|29829472|ref|NP_824106.1| hypothetical protein SAV_2930 [Streptomyces avermitilis MA-4680] gi|29606580|dbj|BAC70641.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 675 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + F + Q ++ + ++ G NG GK++L +AI+ + YG R Sbjct: 1 MLLRKITLEEFGAYRGKQSLDLTPKKNKPIILIGGLNGCGKTTLLDAIQLVLYGNRAR 58 >gi|118467917|ref|YP_884426.1| recombination protein F [Mycobacterium smegmatis str. MC2 155] gi|152060497|sp|A0QND8|RECF_MYCS2 RecName: Full=DNA replication and repair protein recF gi|152060498|sp|P0C561|RECF_MYCSM RecName: Full=DNA replication and repair protein recF gi|1321896|emb|CAA63251.1| recF [Mycobacterium smegmatis] gi|118169204|gb|ABK70100.1| DNA replication and repair protein RecF [Mycobacterium smegmatis str. MC2 155] Length = 384 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + ++ FR + ++ T+ G NG+GK++L EA+ + + R + + Sbjct: 6 LGLTDFRSWA-RVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPLIRAG 64 Query: 92 IK 93 + Sbjct: 65 AE 66 >gi|28870806|ref|NP_793425.1| hypothetical protein PSPTO_3650 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854055|gb|AAO57120.1| protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 426 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 Y + + I+I +FR +++ F + T+ G N GKS++ A+ F G T Sbjct: 21 YLQGRTMYITRIKIKNFRSLVDVEI--FPKNYTVFAGANDSGKSNVLRALNLFFNGQT 76 >gi|83588879|ref|YP_428888.1| DNA replication and repair protein RecF [Moorella thermoacetica ATCC 39073] gi|97180817|sp|Q2RMJ4|RECF_MOOTA RecName: Full=DNA replication and repair protein recF gi|83571793|gb|ABC18345.1| DNA replication and repair protein RecF [Moorella thermoacetica ATCC 39073] Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ +FR + + + L I+ G N GK++L EAI +L + R++ Sbjct: 4 LSLQQLQLINFRSYKCLT-WDCRPGLNIIFGPNAAGKTNLLEAIGYLALARSFRQQQDQQ 62 Query: 87 I 87 + Sbjct: 63 L 63 >gi|56478804|ref|YP_160393.1| hypothetical protein ebA5917 [Aromatoleum aromaticum EbN1] gi|56314847|emb|CAI09492.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 429 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + ++ E +EFA L + G NG GKS L +A W+ R Sbjct: 2 LKSLHLAGVGPAREFGPVEFAPRLNFITGDNGLGKSFLLDAAWWVLTRTWARGV 55 >gi|159110823|ref|XP_001705653.1| SMC1 beta-like protein [Giardia lamblia ATCC 50803] gi|157433741|gb|EDO77979.1| SMC1 beta-like protein [Giardia lamblia ATCC 50803] Length = 1353 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + L + + +F+ F I L+ + G NG GK+++ +AI + Sbjct: 3 YSLSAVRMFNFKTFVGEHSITDIPRLSFIVGPNGSGKTNIYDAILFA 49 >gi|332533698|ref|ZP_08409557.1| DNA recombination and repair protein RecF [Pseudoalteromonas haloplanktis ANT/505] gi|332036862|gb|EGI73323.1| DNA recombination and repair protein RecF [Pseudoalteromonas haloplanktis ANT/505] Length = 364 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR E +E + + I+ G+NG GK+SL EAI +L +G + R S Sbjct: 1 MSLSHLSLKYFRNI-EALTLEPVNGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTPKHKS 59 Query: 87 IKKRSIKT 94 I + Sbjct: 60 IIAHQQEQ 67 >gi|256544665|ref|ZP_05472037.1| exonuclease SbcC [Anaerococcus vaginalis ATCC 51170] gi|256399554|gb|EEU13159.1| exonuclease SbcC [Anaerococcus vaginalis ATCC 51170] Length = 1020 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +E+ F + I+F + I++G G GK+++ +AI + +G QR Sbjct: 1 MKPVKLEMYGFMTYKNKTFIDFTKIYDSKIFIISGDTGSGKTTIFDAISFALFGEIQREG 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 FNSKDIRS 68 >gi|297564536|ref|YP_003683508.1| DNA replication and repair protein RecF [Meiothermus silvanus DSM 9946] gi|296848985|gb|ADH62000.1| DNA replication and repair protein RecF [Meiothermus silvanus DSM 9946] Length = 347 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + +HFR + A LT V G N GKS+L EAI G + D Sbjct: 1 MRLLRLRQTHFRNLKSPE-FAPAPGLTTVVGGNAQGKSNLLEAIYLALGGE-LKNGLSDR 58 Query: 87 IKKRSIK 93 I + Sbjct: 59 IAFGQTE 65 >gi|227487548|ref|ZP_03917864.1| prophage Lp2 protein 4 [Corynebacterium glucuronolyticum ATCC 51867] gi|227092530|gb|EEI27842.1| prophage Lp2 protein 4 [Corynebacterium glucuronolyticum ATCC 51867] Length = 592 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 27 FKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLS 67 + +I I FR F KI + ++T++ G NG GKS++ Sbjct: 1 MYIKEILIEDFRAFKGGNPTKIPLSKNITVLTGHNGVGKSTIL 43 >gi|152983078|ref|YP_001352718.1| hypothetical protein mma_1028 [Janthinobacterium sp. Marseille] gi|151283155|gb|ABR91565.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 605 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L ++ I++FR + K+ F L ++ G N GKS++ +A+ L G + D Sbjct: 1 MHLAELNITNFRKLRD-AKLRFQAGLNVLVGANNVGKSAVVDALRALLAGQEEPYPRLD 58 >gi|123439544|ref|XP_001310542.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121892316|gb|EAX97612.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1118 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + + +F+ + + +I D V G N GKS+ +AI ++ Sbjct: 1 MKIEKLRLENFKSYQGVHEIGPFDDFVAVIGSNASGKSNCFDAICFVL 48 >gi|319789740|ref|YP_004151373.1| SMC domain protein [Thermovibrio ammonificans HB-1] gi|317114242|gb|ADU96732.1| SMC domain protein [Thermovibrio ammonificans HB-1] Length = 894 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L + + +F +I F D ++ G+N GK+S+ + + +G +R + Sbjct: 1 MIRLRGLSLKNFLSHRS-TEIPFTDQAFVILGENASGKTSILRGVFFGVFGEDLKRAKAE 59 Query: 86 SIKKRSIKT 94 + R+ + Sbjct: 60 ELINRASNS 68 >gi|301058624|ref|ZP_07199627.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447272|gb|EFK11034.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 442 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I I +FR E +I+ D T+ G N GK+S + + G + R H S Sbjct: 1 MKLKKIHIKNFRRL-EDVQIDLDDGETVFVGPNNSGKTSATVIFRYFLKGN-EFRIHDFS 58 Query: 87 IKK 89 + + Sbjct: 59 VSR 61 >gi|298377208|ref|ZP_06987162.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298266192|gb|EFI07851.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 516 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA--IEWLFYGYTQRRKHG 84 + + + +FRG+ + F+ +LT G+N GKS++ EA I + Sbjct: 1 MLIKSVTLKNFRGYRSETTVLFS-NLTTFVGRNDIGKSTILEALDIFFNEGKGCIPLDKE 59 Query: 85 DSIKKRSIKTPMPMCMAV 102 D K+ S + + +AV Sbjct: 60 DINKRASSEGDDEIIIAV 77 >gi|293553550|ref|ZP_06674177.1| DNA replication and repair protein RecF [Enterococcus faecium E1039] gi|291602305|gb|EFF32530.1| DNA replication and repair protein RecF [Enterococcus faecium E1039] Length = 374 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++R + E+ EF+ +L I G+N GK++L E+I L + R Sbjct: 1 MRLNKLYLKNYRNYEELNT-EFSKNLVIFLGENAQGKTNLLESIYVLAMTRSHR 53 >gi|213962847|ref|ZP_03391107.1| ATPase [Capnocytophaga sputigena Capno] gi|213954504|gb|EEB65826.1| ATPase [Capnocytophaga sputigena Capno] Length = 352 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAI 70 K+ +I + +++ F E + I F + LT++ G NG GK+SL +AI Sbjct: 1 MKIKEITLRNYKRFVEQKTIFFHKDGEINDLTLIVGNNGTGKTSLLQAI 49 >gi|229917452|ref|YP_002886098.1| DNA replication and repair protein RecF [Exiguobacterium sp. AT1b] gi|259563366|sp|C4KZZ0|RECF_EXISA RecName: Full=DNA replication and repair protein recF gi|229468881|gb|ACQ70653.1| DNA replication and repair protein RecF [Exiguobacterium sp. AT1b] Length = 372 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L I + ++R + E +++F++ ++ G+N GK++L E+I L + R Sbjct: 1 MHLKSIRLQNYRNY-ETLELDFSEQTNVLIGENAQGKTNLLESIYVLALAKSHRTTQD 57 >gi|91202091|emb|CAJ75151.1| hypothetical protein kuste4389 [Candidatus Kuenenia stuttgartiensis] Length = 574 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 KL++I+I +FRG + D LT++ G+N GKS++ EAI + G+ RR Sbjct: 1 MKLIEIKIENFRGVRSLHLP--LDGLTVLIGENNTGKSTVLEAIRLVLTRGFGVRRG 55 >gi|9630369|ref|NP_046798.1| Old [Enterobacteria phage P2] gi|6136282|sp|P13520|VOLD_BPP2 RecName: Full=Overcoming lysogenization defect protein gi|3139128|gb|AAD03309.1| Old [Enterobacteria phage P2] Length = 586 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L + IS+FR I T + G N GKS++ AI+WL G Sbjct: 1 MTVRLASVSISNFRSCKSTSAI--LRPFTALVGYNNAGKSNIILAIKWLLDGS 51 >gi|323489857|ref|ZP_08095081.1| exonuclease [Planococcus donghaensis MPA1U2] gi|323396492|gb|EGA89314.1| exonuclease [Planococcus donghaensis MPA1U2] Length = 1030 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 10/93 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY----- 77 + L ++++ F + ++I+F + L +++G G GK+++ + I + YG Sbjct: 1 MRPLKLKMTAFGPYKNTEEIDFANLQGNQLFVISGSTGSGKTTIFDGICFALYGSASGSD 60 Query: 78 -TQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 ++ R + T + M + KY++ Sbjct: 61 RSESRILRSDFANDTTHTAVEMEFEIHDKKYRV 93 >gi|124268178|ref|YP_001022182.1| ATP-dependent OLD family endonuclease [Methylibium petroleiphilum PM1] gi|124260953|gb|ABM95947.1| ATP-dependent endonuclease of the OLD family-like protein [Methylibium petroleiphilum PM1] Length = 608 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +FR + E ++ D LT G+N GKSS+ EA+E F + + GD+ Sbjct: 1 MRLKSVAIKNFRCYREEATVQL-DELTTFVGKNDIGKSSVLEALEIFFNNDVVKIEAGDA 59 >gi|315659992|ref|ZP_07912850.1| recombination protein F [Staphylococcus lugdunensis M23590] gi|315494893|gb|EFU83230.1| recombination protein F [Staphylococcus lugdunensis M23590] Length = 371 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E + + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EAVTLNCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|291233666|ref|XP_002736773.1| PREDICTED: SMC6 protein-like [Saccoglossus kowalevskii] Length = 735 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + + F ++ + G+NG GKS++ A+ G G S+K Sbjct: 53 IERVTLKNFMCHS-RLEFNFGPNVNFIVGRNGSGKSAVLTAMVVGLGGKATVTNRGSSVK 111 >gi|289551837|ref|YP_003472741.1| DNA recombination and repair protein RecF [Staphylococcus lugdunensis HKU09-01] gi|289181368|gb|ADC88613.1| DNA recombination and repair protein RecF [Staphylococcus lugdunensis HKU09-01] Length = 371 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E + + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLKTLQLENYRNY-EAVTLNCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|84497191|ref|ZP_00996013.1| recombination protein F [Janibacter sp. HTCC2649] gi|84382079|gb|EAP97961.1| recombination protein F [Janibacter sp. HTCC2649] Length = 398 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + + +T G NG GK++L EAI +L + R + Sbjct: 1 MYVRHLTVGDFRSYPSAE-LPLEPGITTFVGLNGQGKTNLVEAIGYLASLSSHRVANDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRFGAAQ 67 >gi|296328642|ref|ZP_06871159.1| ferric enterobactin transport ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154241|gb|EFG95042.1| ferric enterobactin transport ATP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 259 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%) Query: 35 SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 H + E + FA ++ G NG GKS+L +AI L + G ++ K + Sbjct: 13 KHKKSIFENLSVNFAKGFNVILGPNGAGKSTLLKAIFGLLKYQGEICYDGINLSKINFNK 72 Query: 95 PMPMCMAVPR 104 + +P+ Sbjct: 73 KTELISYLPQ 82 >gi|295443032|ref|XP_001713090.2| DNA repair protein Rad50 [Schizosaccharomyces pombe 972h-] gi|259016326|sp|Q9UTJ8|RAD50_SCHPO RecName: Full=DNA repair protein rad50 gi|254745547|emb|CAB96041.3| DNA repair protein Rad50 [Schizosaccharomyces pombe] Length = 1285 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + I+F LT++ GQNG GK+++ E +++ G Sbjct: 4 IDRMSIMGIRSFDNRSRESIQFFSPLTLIVGQNGSGKTTIIECLKYATTG 53 >gi|253681521|ref|ZP_04862318.1| exonuclease SbcC [Clostridium botulinum D str. 1873] gi|253561233|gb|EES90685.1| exonuclease SbcC [Clostridium botulinum D str. 1873] Length = 1176 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K ++IS F Q IEF L + G G GKS++ +AI YG R Sbjct: 1 MKPRLLKISGLNSFENQQIIEFNKLTEKGLFGIFGPTGSGKSTILDAITIALYGKVTRSN 60 Query: 83 HG 84 G Sbjct: 61 KG 62 >gi|256832927|ref|YP_003161654.1| ABC transporter-like protein [Jonesia denitrificans DSM 20603] gi|256686458|gb|ACV09351.1| ABC transporter related [Jonesia denitrificans DSM 20603] Length = 236 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 25 LIFKLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L + +SH R EF+ +T + G NG GKS+L I + R Sbjct: 1 MTLQLAQLTVSHRRSHFTLGPITAEFSPGITGIVGVNGAGKSTLFNTIVGTLRPSSGRVM 60 Query: 83 HGDS 86 H D+ Sbjct: 61 HRDT 64 >gi|281422000|ref|ZP_06252999.1| conserved hypothetical protein [Prevotella copri DSM 18205] gi|281403958|gb|EFB34638.1| conserved hypothetical protein [Prevotella copri DSM 18205] Length = 585 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + ++++ +FR + + F + ++ G+N GK+++ +AI+++ Sbjct: 1 MYISELKLWNFRKYGADDFDLTNPHLTVPFKSGMNVLIGENDSGKTAIIDAIKYVLKTNA 60 Query: 79 QRRKH 83 Sbjct: 61 YESIR 65 >gi|269859571|ref|XP_002649510.1| DNA repair protein spr18 [Enterocytozoon bieneusi H348] gi|220067061|gb|EED44529.1| DNA repair protein spr18 [Enterocytozoon bieneusi H348] Length = 1067 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I + +F+ F + Q+I F ++L ++ NG GKSS+S +I ++F ++ Sbjct: 17 IVYIHLLNFQTF-KNQEIYFGNNLNLIVAPNGTGKSSISNSIAFIFEEKPEK 67 >gi|238750413|ref|ZP_04611914.1| SMC protein-like protein [Yersinia rohdei ATCC 43380] gi|238711344|gb|EEQ03561.1| SMC protein-like protein [Yersinia rohdei ATCC 43380] Length = 673 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 27 FKLLDIEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +I I +FR F +K + LT + G+N GK+++ +AI + Q Sbjct: 1 MYISEIRIENFRLFGSAEKAFVLSLNPGLTALVGENDAGKTAVVDAIRLVLGTRDQDFLR 60 Query: 84 GD 85 D Sbjct: 61 ID 62 >gi|256078657|ref|XP_002575611.1| structural maintenance of chromosomes smc3 [Schistosoma mansoni] gi|238660853|emb|CAZ31844.1| structural maintenance of chromosomes smc3, putative [Schistosoma mansoni] Length = 291 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 13/66 (19%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIV-----------NGQNGYGKSSLSEAIEWLF 74 + + I FR + + EF+ H I+ G+NG GKS+ +AI+++ Sbjct: 1 MYIKKVIIQGFRSYRDQTCPEEFSPHHNIIGMICLPSIIPTVGRNGSGKSNFFQAIQFVL 60 Query: 75 -YGYTQ 79 Y+ Sbjct: 61 SDEYSH 66 >gi|167032730|ref|YP_001667961.1| SMC domain-containing protein [Pseudomonas putida GB-1] gi|166859218|gb|ABY97625.1| SMC domain protein [Pseudomonas putida GB-1] Length = 580 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + +F+G ++ A +T+V G NG GKSSL EAI + G + + D Sbjct: 1 MHLEHIFVENFQGLRS-ASLDLATPITLVAGFNGAGKSSLREAIGFALGGSGRVQHKKDY 59 Query: 87 IK 88 K Sbjct: 60 GK 61 >gi|116873077|ref|YP_849858.1| exonuclease SbcC, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741955|emb|CAK21079.1| exonuclease SbcC, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1023 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|315657691|ref|ZP_07910573.1| recombination protein F [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492163|gb|EFU81772.1| recombination protein F [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 413 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + F + G NG GK++L EA+ +L + R Sbjct: 1 MFVSDLALDWFRSYR-QVILHFPAGTNVFVGANGQGKTNLLEALNYLAVLASHRIGTDAG 59 Query: 87 IKKR----SIKTPMPMCMAVPRCK 106 + R ++++P + V R + Sbjct: 60 LIFREIGDTVRSPATLRAGVIRAR 83 >gi|304390483|ref|ZP_07372436.1| recombination protein F [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326239|gb|EFL93484.1| recombination protein F [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 413 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + F + G NG GK++L EA+ +L + R Sbjct: 1 MFVSDLALDWFRSYR-QVILHFPAGTNVFVGANGQGKTNLLEALNYLAVLASHRIGTDAG 59 Query: 87 IKKR----SIKTPMPMCMAVPRCK 106 + R ++++P + V R + Sbjct: 60 LIFREIGDTVRSPATLRAGVIRAR 83 >gi|298345813|ref|YP_003718500.1| recombination protein F [Mobiluncus curtisii ATCC 43063] gi|298235874|gb|ADI67006.1| recombination protein F [Mobiluncus curtisii ATCC 43063] Length = 413 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + F + G NG GK++L EA+ +L + R Sbjct: 1 MFVSDLALDWFRSYR-QVILHFPAGTNVFVGANGQGKTNLLEALNYLAVLASHRIGTDAG 59 Query: 87 IKKR----SIKTPMPMCMAVPRCK 106 + R ++++P + V R + Sbjct: 60 LIFREIGDTVRSPATLRAGVIRAR 83 >gi|28197948|ref|NP_778262.1| recombination protein F [Xylella fastidiosa Temecula1] gi|182680575|ref|YP_001828735.1| recombination protein F [Xylella fastidiosa M23] gi|32129956|sp|Q87FC4|RECF_XYLFT RecName: Full=DNA replication and repair protein recF gi|226737849|sp|B2I5U9|RECF_XYLF2 RecName: Full=DNA replication and repair protein recF gi|28056008|gb|AAO27911.1| DNA replication and repair RecF protein [Xylella fastidiosa Temecula1] gi|182630685|gb|ACB91461.1| DNA replication and repair protein RecF [Xylella fastidiosa M23] gi|307579029|gb|ADN62998.1| recombination protein F [Xylella fastidiosa subsp. fastidiosa GB514] Length = 364 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + HFR F + L G+NG GK+SL EA+ + YG + R + D Sbjct: 1 MHITQLVLRHFRCFDVVDFFPL-PGLNFFIGENGSGKTSLLEAVHLMGYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRHGSE 66 >gi|71275532|ref|ZP_00651818.1| RecF protein [Xylella fastidiosa Dixon] gi|71900179|ref|ZP_00682319.1| RecF protein [Xylella fastidiosa Ann-1] gi|170729254|ref|YP_001774687.1| recombination protein F [Xylella fastidiosa M12] gi|226737850|sp|B0U1G7|RECF_XYLFM RecName: Full=DNA replication and repair protein recF gi|71163832|gb|EAO13548.1| RecF protein [Xylella fastidiosa Dixon] gi|71730068|gb|EAO32159.1| RecF protein [Xylella fastidiosa Ann-1] gi|167964047|gb|ACA11057.1| DNA replication and repair RecF protein [Xylella fastidiosa M12] Length = 364 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + HFR F + L G+NG GK+SL EA+ + YG + R + D Sbjct: 1 MHITQLVLRHFRCFDVVDFFPL-PGLNFFIGENGSGKTSLLEAVHLMGYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRHGSE 66 >gi|71899733|ref|ZP_00681885.1| RecF protein [Xylella fastidiosa Ann-1] gi|71730528|gb|EAO32607.1| RecF protein [Xylella fastidiosa Ann-1] Length = 364 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + HFR F + L G+NG GK+SL EA+ + YG + R + D Sbjct: 1 MHITQLVLRHFRCFDVVDFFPL-PGLNFFIGENGSGKTSLLEAVHLMGYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRHGSE 66 >gi|291457886|ref|ZP_06597276.1| RecF protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419430|gb|EFE93149.1| RecF protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 379 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +E+ +FR + E + I+ G+N GK++L EAI + R Sbjct: 1 MQIDSLELQNFRNY-ENLSLHLCRGSNILYGENAQGKTNLLEAIFMACTAKSYRFTKDRD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRFGEE 66 >gi|261381103|ref|ZP_05985676.1| conserved hypothetical protein [Neisseria subflava NJ9703] gi|284795901|gb|EFC51248.1| conserved hypothetical protein [Neisseria subflava NJ9703] Length = 478 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 14/90 (15%) Query: 27 FKLLDIEISHFRGF-TEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I +S+F+GF E +I F L I G+N GKSS+ EA+++L G Sbjct: 1 MFIKSICLSNFKGFIGENHQINFKIPDGTTPGSGLNIFVGENNSGKSSIFEAVDFLRNGI 60 Query: 78 T--QRRKHGDSIKKRSIKTPMPMCMAVPRC 105 R K+ + P C+ + C Sbjct: 61 KGEIDRIRS---KRENNTQPEHACIELTFC 87 >gi|225352265|ref|ZP_03743288.1| hypothetical protein BIFPSEUDO_03881 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157512|gb|EEG70851.1| hypothetical protein BIFPSEUDO_03881 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 566 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + ++ + F+ F+ ++E + + IV G N GKS+L E I + G Sbjct: 1 MYIKEMRVFGFKRFS-KLQVELSPGINIVVGDNDAGKSTLLEVITAVLDGQ 50 >gi|311105224|ref|YP_003978077.1| RecF protein [Achromobacter xylosoxidans A8] gi|310759913|gb|ADP15362.1| RecF protein [Achromobacter xylosoxidans A8] Length = 594 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I I +F+G ++ ++ G NG GKSS++EA+ G +R Sbjct: 1 MRINRITIENFQG-ARAVDLDLRTPAALIAGPNGAGKSSIAEAVRLALLGAPER 53 >gi|239978229|ref|ZP_04700753.1| exonuclease [Streptomyces albus J1074] Length = 613 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L + I+ F F +I+F A L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLGITAFGPFGGAHEIDFDALSAAGLFLLHGPTGAGKTSVLDAVCYALYGS 55 >gi|255284296|ref|ZP_05348851.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] gi|255265143|gb|EET58348.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] Length = 663 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIE--FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I +FR F + IE F + + G+N GKSS+ +A+ ++ T R+ Sbjct: 1 MYLKKLIIKNFRIF-DEMGIELIFNKGVNAIIGENNSGKSSVIDALRIVYSTVTYRK 56 >gi|161528721|ref|YP_001582547.1| SMC domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340022|gb|ABX13109.1| SMC domain protein [Nitrosopumilus maritimus SCM1] Length = 806 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I++++ R +T + IEF +T+ G G GKS++ AIE+ +G Sbjct: 3 LKSIQLNNIRSYT-NEIIEFPLGITLFEGDIGSGKSTILMAIEFSLFG 49 >gi|16800754|ref|NP_471022.1| hypothetical protein lin1686 [Listeria innocua Clip11262] gi|16414173|emb|CAC96917.1| sbcC [Listeria innocua Clip11262] Length = 1023 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|327537558|gb|EGF24275.1| conserved hypothetical protein, membrane [Rhodopirellula baltica WH47] Length = 1350 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 31/58 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ DI+I F +T + + +T+ G N GK++L + + + YG+T+ R+ Sbjct: 1 MKIKDIQIDGFGVWTGLSVDSLPEGMTLFYGPNEAGKTTLMQFLRAMLYGFTEERRQK 58 >gi|60680633|ref|YP_210777.1| hypothetical protein BF1102 [Bacteroides fragilis NCTC 9343] gi|60492067|emb|CAH06829.1| conserved hypothetical protein with RecF/RecN/SMC N-terminal domain [Bacteroides fragilis NCTC 9343] Length = 691 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + ++R F E F + + G+N GK++L AI + + Sbjct: 1 MYISKVSLVNYRNF-ENSFFLFNKGINTIIGENASGKTNLFRAIRLILDDNLLSSAYK 57 >gi|150389921|ref|YP_001319970.1| M protein-like MukB domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949783|gb|ABR48311.1| MukB N-terminal domain/M protein repeat protein [Alkaliphilus metalliredigens QYMF] Length = 1081 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL I++ ++ + I+ D+ ++ G NG GKS++ +AI+++ G R Sbjct: 3 KLTKIKLINWH-YLTNVTIDIHDN-CLITGDNGSGKSTILDAIQYVLTGGRAR 53 >gi|330830509|ref|YP_004393461.1| hypothetical protein B565_2809 [Aeromonas veronii B565] gi|328805645|gb|AEB50844.1| hypothetical protein B565_2809 [Aeromonas veronii B565] Length = 489 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I+I +F+ + I A +T++ G N GK+S+ +A+ L Y+ + Sbjct: 2 LKSIKIENFKSIKDKADIRLAP-ITLIFGPNSSGKTSILQALGVLKQTYSGK 52 >gi|315282594|ref|ZP_07870973.1| SbcC family exonuclease [Listeria marthii FSL S4-120] gi|313613761|gb|EFR87526.1| SbcC family exonuclease [Listeria marthii FSL S4-120] Length = 1023 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEV 76 >gi|307269931|ref|ZP_07551257.1| RecF/RecN/SMC protein [Enterococcus faecalis TX4248] gi|306513721|gb|EFM82327.1| RecF/RecN/SMC protein [Enterococcus faecalis TX4248] Length = 450 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + K+ +E+ + + + + LTI+ G N GK+S+ +AI W G + Sbjct: 13 SENMTVKINSLEVENVKRVKAVVIQPNENGLTILGGNNNQGKTSVLDAIAWALGGNKYK 71 >gi|198401788|gb|ACH87544.1| Rad50 [Platynereis dumerilii] gi|198401793|gb|ACH87548.1| Rad50 [Platynereis dumerilii] Length = 1229 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 29 LLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K IEF LT++ G NG GK+++ E ++++ G Sbjct: 4 IAKMSIQGVRSFGPDDKNRGLIEFYTPLTLILGPNGTGKTTIIECLKYMTTG 55 >gi|88603328|ref|YP_503506.1| exonuclease SbcC [Methanospirillum hungatei JF-1] gi|88188790|gb|ABD41787.1| exonuclease SbcC [Methanospirillum hungatei JF-1] Length = 1219 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L ++ S+ I+F++ + ++ G G GK+++ +AI YG T R Sbjct: 1 MKILQLKFSNLNSLAGDWTIDFSNPAFTSSGIFLITGPTGSGKTTVLDAICLALYGKTPR 60 >gi|284802037|ref|YP_003413902.1| hypothetical protein LM5578_1792 [Listeria monocytogenes 08-5578] gi|284995179|ref|YP_003416947.1| hypothetical protein LM5923_1744 [Listeria monocytogenes 08-5923] gi|284057599|gb|ADB68540.1| hypothetical protein LM5578_1792 [Listeria monocytogenes 08-5578] gi|284060646|gb|ADB71585.1| hypothetical protein LM5923_1744 [Listeria monocytogenes 08-5923] Length = 1023 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|198416844|ref|XP_002121540.1| PREDICTED: similar to SMC5 protein [Ciona intestinalis] Length = 1071 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 ++ I + +F + + F L ++ G NG GKSS+ AI G T G Sbjct: 30 IIRINVQNFLTY-DQCTFRFNPKLNVIIGPNGTGKSSIVCAICIGLAGRTSLLARAKEIG 88 Query: 85 DSIKKRSIKTPMPMCM-AVPRC 105 D I+ + + + + VP C Sbjct: 89 DYIQHGKQQATIEVELYNVPHC 110 >gi|159128071|gb|EDP53186.1| DNA repair protein Rad18, putative [Aspergillus fumigatus A1163] Length = 1082 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 115 LERVECYNFMCH-DHFRVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 173 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 174 -SFIKEGKESATIIVRLKNQ 192 >gi|146304004|ref|YP_001191320.1| SMC domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702254|gb|ABP95396.1| SMC domain protein [Metallosphaera sedula DSM 5348] Length = 359 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + I+I +F+ F ++ V G NG GK++L +A Sbjct: 2 ITSIKIKNFKSFRDVT---LNLGKISVVGPNGSGKTNLVDA 39 >gi|71000751|ref|XP_755057.1| DNA repair protein Rad18 [Aspergillus fumigatus Af293] gi|66852694|gb|EAL93019.1| DNA repair protein Rad18, putative [Aspergillus fumigatus Af293] Length = 1082 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 115 LERVECYNFMCH-DHFRVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 173 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 174 -SFIKEGKESATIIVRLKNQ 192 >gi|326939583|gb|AEA15479.1| exonuclease SbcC [Bacillus thuringiensis serovar chinensis CT-43] Length = 517 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + +I + F+ T + L ++ G + GK+S+ A+ W+ + Sbjct: 4 INEIFVEGFQSHT-NSHFNLGNGLNVITGPSDSGKTSIIRAVRWVAF 49 >gi|317491003|ref|ZP_07949439.1| DNA repair protein RecN [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920550|gb|EFV41873.1| DNA repair protein RecN [Enterobacteriaceae bacterium 9_2_54FAA] Length = 553 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ G ++ Sbjct: 2 LTQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRSEAAM 54 >gi|308479711|ref|XP_003102064.1| hypothetical protein CRE_07629 [Caenorhabditis remanei] gi|308262444|gb|EFP06397.1| hypothetical protein CRE_07629 [Caenorhabditis remanei] Length = 347 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + F + V G NG GKS L EA+ + + D + Sbjct: 23 RFYFDKGVNAVIGPNGCGKSILLEAMRFCLSDTEKSSIISDKL 65 >gi|284929017|ref|YP_003421539.1| RecF/RecN/SMC N-terminal domain-containing protein [cyanobacterium UCYN-A] gi|284809476|gb|ADB95181.1| RecF/RecN/SMC N-terminal domain-containing protein [cyanobacterium UCYN-A] Length = 1008 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + +F + ++ ++F H + G NG GKSSL EAI W +G + D I Sbjct: 4 LKLTLKNFLSYQDVT-LDFQGLHTVCICGANGAGKSSLLEAIAWTVWGQGRTSSDEDVI 61 >gi|270263526|ref|ZP_06191795.1| exonuclease SbcC [Serratia odorifera 4Rx13] gi|270042410|gb|EFA15505.1| exonuclease SbcC [Serratia odorifera 4Rx13] Length = 1084 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|241762592|ref|ZP_04760666.1| hypothetical protein ZmobDRAFT_1745 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372853|gb|EER62550.1| hypothetical protein ZmobDRAFT_1745 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 532 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 LL I++FR F ++ E L ++ G NG GKSS +A+ + + +G Sbjct: 1 MHLLSAHITNFRRFADLTIKEIPKTAKLVVLAGPNGSGKSSFFDALLLRYRLDSHFGWNG 60 Query: 85 D--SIKKRSIKT 94 D ++ +T Sbjct: 61 DQKYYNRQHSET 72 >gi|261364938|ref|ZP_05977821.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566730|gb|EFC88290.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 395 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ ++I +EI + F D L I+ G+NG GK+++ + I ++ G+ Sbjct: 1 MKIKSVKIFGLHKHSEIINLTFNDDLNIITGRNGAGKTTILKLIWYVLSGHI 52 >gi|224499224|ref|ZP_03667573.1| hypothetical protein LmonF1_05837 [Listeria monocytogenes Finland 1988] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEV 76 >gi|182440043|ref|YP_001827762.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468559|dbj|BAG23079.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1021 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + I+ F F Q ++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLSITAFGPFGATQDVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYG 54 >gi|157369282|ref|YP_001477271.1| exonuclease SbcC [Serratia proteamaculans 568] gi|157321046|gb|ABV40143.1| exonuclease SbcC [Serratia proteamaculans 568] Length = 1083 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|291443135|ref|ZP_06582525.1| LOW QUALITY PROTEIN: exonuclease [Streptomyces roseosporus NRRL 15998] gi|291346082|gb|EFE72986.1| LOW QUALITY PROTEIN: exonuclease [Streptomyces roseosporus NRRL 15998] Length = 333 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + I+ F F Q+++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLSITAFGPFGTTQEVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYG 54 >gi|239986195|ref|ZP_04706859.1| putative exonuclease [Streptomyces roseosporus NRRL 11379] Length = 508 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + I+ F F Q+++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLSITAFGPFGTTQEVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYG 54 >gi|239939709|ref|ZP_04691646.1| putative exonuclease [Streptomyces roseosporus NRRL 15998] Length = 337 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + I+ F F Q+++F + L +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLSITAFGPFGTTQEVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYG 54 >gi|257059860|ref|YP_003137748.1| DNA repair protein RecN [Cyanothece sp. PCC 8802] gi|256590026|gb|ACV00913.1| DNA repair protein RecN [Cyanothece sp. PCC 8802] Length = 586 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++I +F + ++F L ++ G+ G GKS + +AI+ + G R ++ Sbjct: 2 LSLLQIKNF-TLVDQLTLQFGQGLNVLTGETGAGKSIILDAIDTVLGGKVNNRLIRQGMQ 60 Query: 89 KRSIK 93 + S++ Sbjct: 61 QASLE 65 >gi|218246818|ref|YP_002372189.1| DNA repair protein RecN [Cyanothece sp. PCC 8801] gi|218167296|gb|ACK66033.1| DNA repair protein RecN [Cyanothece sp. PCC 8801] Length = 586 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++I +F + ++F L ++ G+ G GKS + +AI+ + G R ++ Sbjct: 2 LSLLQIKNF-TLVDQLTLQFGQGLNVLTGETGAGKSIILDAIDTVLGGKVNNRLIRQGMQ 60 Query: 89 KRSIK 93 + S++ Sbjct: 61 QASLE 65 >gi|162446892|ref|YP_001620024.1| DNA replication and repair protein [Acholeplasma laidlawii PG-8A] gi|189039616|sp|A9NE68|RECF_ACHLI RecName: Full=DNA replication and repair protein recF gi|161984999|gb|ABX80648.1| DNA replication and repair protein [Acholeplasma laidlawii PG-8A] Length = 349 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +FR E K+ L I+ G NG GK+S+ E+I + + R + Sbjct: 2 ITSIELRNFRNL-ENYKVLINKPLVIIQGLNGVGKTSILESIYFAATTKSHRSSVEKDMI 60 Query: 89 K 89 + Sbjct: 61 Q 61 >gi|312958286|ref|ZP_07772807.1| ABC transporter ATP-binding protein [Pseudomonas fluorescens WH6] gi|311287350|gb|EFQ65910.1| ABC transporter ATP-binding protein [Pseudomonas fluorescens WH6] Length = 371 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I I F+ T + +E T + G NG GKS++++A+ + +G +R + Sbjct: 1 MNIESITIKGFKSLTSLT-LEGLTPFTALAGSNGAGKSNITDALAF--FGAVVKRGAATA 57 Query: 87 IKKRS 91 I+ Sbjct: 58 IRDFG 62 >gi|150016584|ref|YP_001308838.1| DNA repair protein RecN [Clostridium beijerinckii NCIMB 8052] gi|149903049|gb|ABR33882.1| DNA repair protein RecN [Clostridium beijerinckii NCIMB 8052] Length = 562 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I +F E I F++ I++G+ G GKS + +AI+++ G + Sbjct: 2 LIQLNIKNF-ALIEDMTINFSEGFNILSGETGAGKSIMIDAIDFVLGGKFSKNL 54 >gi|332665393|ref|YP_004448181.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334207|gb|AEE51308.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 647 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 11/83 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-W--LFYGYT--QRR 81 + +I +F+ +I F L I+ G N GK+++ EA+ W F RR Sbjct: 1 MYIHKFQIKNFKSIKDITLY-FNKGLNIITGVNNSGKTTVLEALSLWQECFSKLITEARR 59 Query: 82 -----KHGDSIKKRSIKTPMPMC 99 K GD + S P Sbjct: 60 AEKGYKRGDYVLGPSYNKYFPFN 82 >gi|317968796|ref|ZP_07970186.1| recombination protein F [Synechococcus sp. CB0205] Length = 392 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +E+ FR + + + +V G+NG GKS+L EA+E L + R Sbjct: 24 IRLHRLELRQFRNYGAL-SLTLEAPRLLVIGRNGEGKSNLLEAVELLGSLRSHRCSSDRD 82 Query: 87 IKKRSIKT 94 + ++ + Sbjct: 83 LIQQGERQ 90 >gi|225387009|ref|ZP_03756773.1| hypothetical protein CLOSTASPAR_00759 [Clostridium asparagiforme DSM 15981] gi|225047021|gb|EEG57267.1| hypothetical protein CLOSTASPAR_00759 [Clostridium asparagiforme DSM 15981] Length = 617 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL++ IS F F + Q + F D L +V G+N GKS+L I + +G ++R Sbjct: 1 MKLLNLHISGFGKFQD-QDVSFEDRLNVVYGKNEAGKSTLHTFIRGMLFGIEKQRGRASK 59 >gi|330958611|gb|EGH58871.1| RecF/RecN/SMC N domain protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 161 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRK 82 + LL +++ F+ F E I+ D L + G+NG G++ + AI LF + +R Sbjct: 1 MFMYLLTLDVQRFKFFGEPFSIKLHDGLNALVGENGAGQTGVVSAIRQLFNDSESGKRV 59 >gi|283457092|ref|YP_003361655.1| recombinational DNA repair ATPase [Rothia mucilaginosa DY-18] gi|283133070|dbj|BAI63835.1| recombinational DNA repair ATPase [Rothia mucilaginosa DY-18] Length = 450 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 10 CA-CLSKSLTSYYARK-LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 CA C + + ARK L + I + +R + + + + +T+ G NG GK+++ Sbjct: 19 CAFCPPVPIPNRTARKELPVYIDHISLLDYRTYA-LLSLPLSAGVTVFLGSNGVGKTNIV 77 Query: 68 EAIEWLFYGYTQRRKHGDSIKKRS 91 EAI++ + R H + + Sbjct: 78 EAIDYAASLSSHRVSHDGPLVRAG 101 >gi|222151252|ref|YP_002560406.1| hypothetical protein MCCL_1003 [Macrococcus caseolyticus JCSC5402] gi|222120375|dbj|BAH17710.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 1009 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-----IVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +EI HF F I+F L +++G+ G GK+++ +A+ + YG Sbjct: 1 MRPIKLEIQHFGPFKNET-IDFKQGLKNHTLFLISGKTGSGKTTIFDAMMYALYGTASTS 59 Query: 82 KH 83 Sbjct: 60 SR 61 >gi|119471660|ref|ZP_01614045.1| gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Alteromonadales bacterium TW-7] gi|119445439|gb|EAW26726.1| gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Alteromonadales bacterium TW-7] Length = 364 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +FR E +E + + I+ G+NG GK+SL EAI +L +G + R S Sbjct: 1 MSLSHLSLKYFRNI-EALTLEPVNGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTPKHKS 59 Query: 87 IKKRSIKT 94 I + Sbjct: 60 IIAHQQEQ 67 >gi|323187247|gb|EFZ72559.1| recF/RecN/SMC N terminal domain protein [Escherichia coli RN587/1] Length = 550 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L + + FR F+ + +I+F + LT++ G NG GK+S+ AI Sbjct: 64 FYLRRLTLKDFRRFS-LLEIKFEEDLTVIIGNNGKGKTSILYAI 106 >gi|312966699|ref|ZP_07780918.1| recF/RecN/SMC N terminal domain protein [Escherichia coli 2362-75] gi|312288651|gb|EFR16552.1| recF/RecN/SMC N terminal domain protein [Escherichia coli 2362-75] Length = 550 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L + + FR F+ + +I+F + LT++ G NG GK+S+ AI Sbjct: 64 FYLRRLTLKDFRRFS-LLEIKFEEDLTVIIGNNGKGKTSILYAI 106 >gi|300781941|ref|YP_003762232.1| DNA replication and repair protein RecF [Amycolatopsis mediterranei U32] gi|299791455|gb|ADJ41830.1| DNA replication and repair protein RecF [Amycolatopsis mediterranei U32] Length = 384 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++ FR + + T++ GQNG GK++L EAI ++ + R Sbjct: 1 MYLRHLQVTDFRSWP-QADLALEPGPTVLVGQNGRGKTNLLEAIGYVATLGSHRVATDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRHGCE 66 >gi|238750287|ref|ZP_04611789.1| DNA replication and repair protein recF [Yersinia rohdei ATCC 43380] gi|238711520|gb|EEQ03736.1| DNA replication and repair protein recF [Yersinia rohdei ATCC 43380] Length = 361 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|254516486|ref|ZP_05128545.1| nuclease sbcCD subunit C [gamma proteobacterium NOR5-3] gi|219674909|gb|EED31276.1| nuclease sbcCD subunit C [gamma proteobacterium NOR5-3] Length = 1025 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +S F F I+F + L ++NG G GK+S+ +AI + YG T + Sbjct: 1 MRPEWLSLSGFGPFGGTVTIDFTEFGESPLFLINGSTGAGKTSILDAICFALYGDTTGGE 60 Query: 83 H-GDSIKKRSIKTPMPMCMAV 102 G ++ + K P +++ Sbjct: 61 RSGAEMRSQFAKDTSPTEVSL 81 >gi|206971599|ref|ZP_03232549.1| putative exonuclease [Bacillus cereus AH1134] gi|206733584|gb|EDZ50756.1| putative exonuclease [Bacillus cereus AH1134] Length = 1029 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|170029480|ref|XP_001842620.1| structural maintenance of chromosomes smc4 [Culex quinquefasciatus] gi|167863204|gb|EDS26587.1| structural maintenance of chromosomes smc4 [Culex quinquefasciatus] Length = 1362 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 73 ISNISNYNFKSYAGHVMLGPFHQRFSAIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 131 >gi|311748455|ref|ZP_07722240.1| putative RecF/RecN/SMC N domain protein [Algoriphagus sp. PR1] gi|126576970|gb|EAZ81218.1| putative RecF/RecN/SMC N domain protein [Algoriphagus sp. PR1] Length = 1010 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 31 DIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR---RKH 83 +EI + E Q IEF L + G G GKSS+ E I YG T+R R Sbjct: 5 RLEIQGLYSYREKQVIEFDQLTAAGLFGIFGAVGSGKSSILEGILLALYGSTERLSDRGE 64 Query: 84 GDSIKKRSIK 93 +S+ + Sbjct: 65 KNSMLNLQSE 74 >gi|119896491|ref|YP_931704.1| exonuclease SbcC [Azoarcus sp. BH72] gi|119668904|emb|CAL92817.1| exonuclease SbcC, putative [Azoarcus sp. BH72] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + F F ++I+F L +++G G GK+S+ + I + YG T + Sbjct: 1 MKPLKLSLQAFGPFAGREEIDFTLLPEGALFLISGPTGAGKTSILDGITYALYGDTSGGE 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|11560048|ref|NP_071582.1| DNA repair protein RAD50 [Rattus norvegicus] gi|60392975|sp|Q9JIL8|RAD50_RAT RecName: Full=DNA repair protein RAD50 gi|9651650|gb|AAF91229.1|AF218576_1 Rad50 [Rattus norvegicus] Length = 1312 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 3 RIEKMSTLGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTG 55 >gi|330862472|emb|CBX72629.1| hypothetical protein YEW_AY04970 [Yersinia enterocolitica W22703] Length = 362 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|326940044|gb|AEA15940.1| exonuclease SbcC [Bacillus thuringiensis serovar chinensis CT-43] Length = 1029 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDDVYTSVELTFQLKGKRYEIK 94 >gi|332160705|ref|YP_004297282.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664935|gb|ADZ41579.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|318604578|emb|CBY26076.1| exonuclease SbcC [Yersinia enterocolitica subsp. palearctica Y11] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|320012093|gb|ADW06943.1| SMC domain protein [Streptomyces flavogriseus ATCC 33331] Length = 1012 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QR 80 +L + ++ F F Q+++F + + +++G G GK+S+ +A+ + YG R Sbjct: 1 MRLHRLTLTAFGPFGATQEVDFDALSSAGIFLLHGPTGAGKTSVLDAVCYGLYGAVPGAR 60 Query: 81 RKHGDSIKKRSIKTPMP 97 + G S++ P Sbjct: 61 QSPGTSLRSDHAPVDRP 77 >gi|152984252|ref|YP_001347744.1| hypothetical protein PSPA7_2377 [Pseudomonas aeruginosa PA7] gi|150959410|gb|ABR81435.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 581 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ +EI++F+G ++ + + +V G NG GKSSL +AI F G +R Sbjct: 1 MRITKLEITNFQGLR-HAALDVSAPVLLVAGHNGAGKSSLLDAIAMAFNGQPRR 53 >gi|123443387|ref|YP_001007361.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090348|emb|CAL13216.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|283781388|ref|YP_003372143.1| SMC domain-containing protein [Pirellula staleyi DSM 6068] gi|283439841|gb|ADB18283.1| SMC domain protein [Pirellula staleyi DSM 6068] Length = 1275 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ +IEI F +T ++ E T++ G N GKS+L + + YG+T +R Sbjct: 1 MKIQEIEIDGFGAWTNLKLQELGGDATVIYGPNEAGKSTLLHFVRTVIYGFTPQR 55 >gi|254832047|ref|ZP_05236702.1| SbcC family exonuclease [Listeria monocytogenes 10403S] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|254829449|ref|ZP_05234136.1| exonuclease [Listeria monocytogenes FSL N3-165] gi|258601865|gb|EEW15190.1| exonuclease [Listeria monocytogenes FSL N3-165] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|295691866|ref|YP_003600476.1| DNA replication and repair protein recf [Lactobacillus crispatus ST1] gi|295029972|emb|CBL49451.1| DNA replication and repair protein recF [Lactobacillus crispatus ST1] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR + + F ++ I G+N GK++L EAI +L + R + Sbjct: 1 MYLDHFTVQNFRNL-KKLDVNFDSNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTNNDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|262046285|ref|ZP_06019248.1| recombination protein F [Lactobacillus crispatus MV-3A-US] gi|260573615|gb|EEX30172.1| recombination protein F [Lactobacillus crispatus MV-3A-US] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR + + F ++ I G+N GK++L EAI +L + R + Sbjct: 1 MYLDHFTVQNFRNL-KKLDVNFDSNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTNNDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|227877544|ref|ZP_03995604.1| recombination protein F [Lactobacillus crispatus JV-V01] gi|256843828|ref|ZP_05549315.1| recombination protein F [Lactobacillus crispatus 125-2-CHN] gi|256849617|ref|ZP_05555049.1| recombination protein F [Lactobacillus crispatus MV-1A-US] gi|293380894|ref|ZP_06626930.1| DNA replication and repair protein RecF [Lactobacillus crispatus 214-1] gi|227862843|gb|EEJ70302.1| recombination protein F [Lactobacillus crispatus JV-V01] gi|256613733|gb|EEU18935.1| recombination protein F [Lactobacillus crispatus 125-2-CHN] gi|256713733|gb|EEU28722.1| recombination protein F [Lactobacillus crispatus MV-1A-US] gi|290922567|gb|EFD99533.1| DNA replication and repair protein RecF [Lactobacillus crispatus 214-1] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR + + F ++ I G+N GK++L EAI +L + R + Sbjct: 1 MYLDHFTVQNFRNL-KKLDVNFDSNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTNNDKD 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|227893835|ref|ZP_04011640.1| recombination protein F [Lactobacillus ultunensis DSM 16047] gi|227864324|gb|EEJ71745.1| recombination protein F [Lactobacillus ultunensis DSM 16047] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + +FR + ++F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDRFTVQNFRNL-KKLDVKFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHR 53 >gi|169826092|ref|YP_001696250.1| ATP binding protein [Lysinibacillus sphaericus C3-41] gi|168990580|gb|ACA38120.1| ATP binding protein [Lysinibacillus sphaericus C3-41] Length = 590 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 F++ I+ ++ F + + I F + +T++ G+N GK+S+ +AI Y Sbjct: 137 FRINSIKFEEYKCFKDEE-ITFEERITVLVGKNASGKTSILDAISVAIGAY 186 >gi|240147140|ref|ZP_04745741.1| hypothetical protein ROSINTL182_09152 [Roseburia intestinalis L1-82] gi|257200663|gb|EEU98947.1| hypothetical protein ROSINTL182_09152 [Roseburia intestinalis L1-82] Length = 375 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L KL IE + R +I+++ F D +T++ G +G GK+ + AIE+ + Sbjct: 2 LNVKLKWIEFENLRTGLKIERVVFNDDITLLVGLSGVGKTQILNAIEYSLKLAVNKNLR 60 >gi|189501917|ref|YP_001957634.1| hypothetical protein Aasi_0498 [Candidatus Amoebophilus asiaticus 5a2] gi|189497358|gb|ACE05905.1| hypothetical protein Aasi_0498 [Candidatus Amoebophilus asiaticus 5a2] Length = 370 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + HF+ + + ++ FA L + G NG GK++L +AI +L + Sbjct: 1 MLLRKLRCYHFKNY-DSIELSFATQLNCIVGANGAGKTNLLDAIHYLSLTKSA 52 >gi|29840206|ref|NP_829312.1| recombination protein F [Chlamydophila caviae GPIC] gi|33301500|sp|Q823G6|RECF_CHLCV RecName: Full=DNA replication and repair protein recF gi|29834554|gb|AAP05190.1| recF protein [Chlamydophila caviae GPIC] Length = 367 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+L + + +FR + E + + + + + G+N GK++L EA+ L G + R H Sbjct: 1 MKILSLRLKNFRNYKEAE-VSLSPDMNYIFGENAQGKTNLLEALYVLSLGRSFRTTH 56 >gi|27376777|ref|NP_768306.1| hypothetical protein blr1666 [Bradyrhizobium japonicum USDA 110] gi|27349919|dbj|BAC46931.1| blr1666 [Bradyrhizobium japonicum USDA 110] Length = 1166 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 25/49 (51%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 +T + G NG GKS++ +A++ + G + + + ++++ + Sbjct: 23 RGMTAIIGPNGAGKSAIIDAVQTVLSGASMASIRFNPSAQSNVRSKRTL 71 >gi|296270138|ref|YP_003652770.1| SMC domain-containing protein [Thermobispora bispora DSM 43833] gi|296092925|gb|ADG88877.1| SMC domain protein [Thermobispora bispora DSM 43833] Length = 1249 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + ++ F F ++++F L +++G G GK+++ +A+ + YG Sbjct: 1 MRLHLLRLTAFGSFPGTEEVDFDALSEAGLFLIHGPTGAGKTTVLDAVCFALYG 54 >gi|239842534|gb|ACS32051.1| S024 [Salmonella enterica subsp. enterica] Length = 641 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHGD 85 KL I IS+F+ F +++T + G NG GK++ +A+ + + RR Sbjct: 1 MKLHSIRISNFQSFGAEPTELTLENITYLIGPNGSGKTAALQALCRLFAFDPSLRRIQRS 60 Query: 86 SIKKRSIKTPMP 97 + P Sbjct: 61 DFHVPHDEQEAP 72 >gi|257058570|ref|YP_003136458.1| ATP-dependent endonuclease of the OLD family [Cyanothece sp. PCC 8802] gi|256588736|gb|ACU99622.1| ATP-dependent endonuclease of the OLD family [Cyanothece sp. PCC 8802] Length = 353 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +E+ +F+ F + +F D T ++ G NG GK+SL +AI T Sbjct: 1 MKVQSVELKYFKRFRNPPRFDFTDPETGLARDLIVLIGMNGAGKTSLLQAIAATLGVATG 60 Query: 80 R 80 R Sbjct: 61 R 61 >gi|171778593|ref|ZP_02919720.1| hypothetical protein STRINF_00572 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282816|gb|EDT48240.1| hypothetical protein STRINF_00572 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 364 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + ++R + ++EF+ L + G+N GK++ EAI +L + R + Sbjct: 1 MWIQKIALKNYRNYL-TNELEFSPRLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRSDKE 59 Query: 87 IKKRSIK 93 + K Sbjct: 60 LIHFQEK 66 >gi|322834091|ref|YP_004214118.1| exonuclease SbcC [Rahnella sp. Y9602] gi|321169292|gb|ADW74991.1| exonuclease SbcC [Rahnella sp. Y9602] Length = 1082 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|312174327|emb|CBX82580.1| DNA replication and repair protein recF [Erwinia amylovora ATCC BAA-2158] Length = 361 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EDADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|292490134|ref|YP_003533029.1| DNA replication and repair protein RecF [Erwinia amylovora CFBP1430] gi|292901138|ref|YP_003540507.1| DNA replication and repair protein [Erwinia amylovora ATCC 49946] gi|291200986|emb|CBJ48125.1| DNA replication and repair protein [Erwinia amylovora ATCC 49946] gi|291555576|emb|CBA24169.1| DNA replication and repair protein recF [Erwinia amylovora CFBP1430] Length = 361 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EDADLALAPGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|288556910|ref|YP_003428845.1| putative DNA repair protein [Bacillus pseudofirmus OF4] gi|288548070|gb|ADC51953.1| putative protein involved in DNA repair [Bacillus pseudofirmus OF4] Length = 475 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + +F+ + IEF+ L ++ GQ+ GK+++ + W+ + Sbjct: 4 IASLRLENFQSHLD-TTIEFSAGLNVLVGQSDSGKTAIIRGVRWVLFNQ 51 >gi|261346740|ref|ZP_05974384.1| DNA replication and repair protein RecF [Providencia rustigianii DSM 4541] gi|282565140|gb|EFB70675.1| DNA replication and repair protein RecF [Providencia rustigianii DSM 4541] Length = 364 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR E + A + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRDFRNI-EDADLSLATGFNFLIGPNGSGKTSILEAIYTLGHGRAFRSIQANRVI 61 Query: 89 KRSIKT 94 + + Sbjct: 62 RHDQEQ 67 >gi|212712614|ref|ZP_03320742.1| hypothetical protein PROVALCAL_03709 [Providencia alcalifaciens DSM 30120] gi|212684830|gb|EEB44358.1| hypothetical protein PROVALCAL_03709 [Providencia alcalifaciens DSM 30120] Length = 364 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR E + A + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRDFRNI-EDADLSLATGFNFLIGPNGSGKTSILEAIYTLGHGRAFRSIQANRVI 61 Query: 89 KRSIKT 94 + + Sbjct: 62 RHDQEQ 67 >gi|210620570|ref|ZP_03292118.1| hypothetical protein CLOHIR_00061 [Clostridium hiranonis DSM 13275] gi|210155284|gb|EEA86290.1| hypothetical protein CLOHIR_00061 [Clostridium hiranonis DSM 13275] Length = 237 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMA 101 +++ +EF++ +T G+NG GKS+L EAI + YG+ + + T +C A Sbjct: 30 DVESLEFSNPITFFVGENGTGKSTLLEAIA-VSYGFNPEGGTKNY-SFSTHDTHSELCDA 87 Query: 102 V 102 + Sbjct: 88 I 88 >gi|218897312|ref|YP_002445723.1| putative exonuclease [Bacillus cereus G9842] gi|218544798|gb|ACK97192.1| putative exonuclease [Bacillus cereus G9842] Length = 1029 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|324501252|gb|ADY40559.1| DNA repair protein rad-50 [Ascaris suum] Length = 1292 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I+I R IEF LTI+ G NG GK+++ EA+++ Sbjct: 4 LDTIDIQGIRSIGVGPQNAIVIEFLTPLTIICGPNGSGKTTIIEALKYATT 54 >gi|290474716|ref|YP_003467596.1| ATP-dependent dsDNA exonuclease [Xenorhabdus bovienii SS-2004] gi|289174029|emb|CBJ80816.1| ATP-dependent dsDNA exonuclease [Xenorhabdus bovienii SS-2004] Length = 1226 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 81 RKHGDSIKKRSIKTPMPMCMA 101 +I+ I C+A Sbjct: 61 LGTISAIQNELITRHTAECLA 81 >gi|251790688|ref|YP_003005409.1| SMC domain-containing protein [Dickeya zeae Ech1591] gi|247539309|gb|ACT07930.1| SMC domain protein [Dickeya zeae Ech1591] Length = 1227 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQDEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 81 ----RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 H + + + + + + V Y+ Sbjct: 61 LKVSPGHNELMTRHTAECLAEVEFEVKNVAYR 92 >gi|221505604|gb|EEE31249.1| SMC protein, putative [Toxoplasma gondii VEG] Length = 1638 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F+ + + V G NG GKS+L++AI + G ++ Sbjct: 232 LRWVVLENFKSYKGTHVVGPLYGSVAVIGPNGAGKSNLTDAICFAL-GVNAKQLR 285 >gi|221484425|gb|EEE22721.1| structural maintenance of chromosomes smc1, putative [Toxoplasma gondii GT1] Length = 510 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F+ + + V G NG GKS+L++AI + G ++ Sbjct: 232 LRWVVLENFKSYKGTHVVGPLYGSVAVIGPNGAGKSNLTDAICFAL-GVNAKQLR 285 >gi|213404310|ref|XP_002172927.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275] gi|212000974|gb|EEB06634.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275] Length = 1296 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 4 IDKMSIMGIRSFDNTSRETIQFYAPLTLIVGHNGAGKTTIIECLKYATTG 53 >gi|237838025|ref|XP_002368310.1| chromosome segregation protein smc1, putative [Toxoplasma gondii ME49] gi|211965974|gb|EEB01170.1| chromosome segregation protein smc1, putative [Toxoplasma gondii ME49] Length = 1638 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F+ + + V G NG GKS+L++AI + G ++ Sbjct: 232 LRWVVLENFKSYKGTHVVGPLYGSVAVIGPNGAGKSNLTDAICFAL-GVNAKQLR 285 >gi|171690412|ref|XP_001910131.1| hypothetical protein [Podospora anserina S mat+] gi|170945154|emb|CAP71265.1| unnamed protein product [Podospora anserina S mat+] Length = 1218 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 35 SHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 F+ + I + + + G NG GKS++ +AI ++ +++ K Sbjct: 54 QGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITHLSTVRAQNLQDLIYK 113 >gi|148977726|ref|ZP_01814287.1| hypothetical purine NTPase [Vibrionales bacterium SWAT-3] gi|145963094|gb|EDK28363.1| hypothetical purine NTPase [Vibrionales bacterium SWAT-3] Length = 784 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I +F+ F + + D L +++G NG+GKSS +A+E LF G +R Sbjct: 5 VKRLVIQNFKLFERREIVIDNDRLIVLDGPNGFGKSSFFDALELLFTGTIRR 56 >gi|71841587|gb|AAZ43084.1| structural maintenance of chromosome protein 1 [Toxoplasma gondii] Length = 1647 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F+ + + V G NG GKS+L++AI + G ++ Sbjct: 229 LRWVVLENFKSYKGTHVVGPLYGSVAVIGPNGAGKSNLTDAICFAL-GVNAKQLR 282 >gi|47097000|ref|ZP_00234574.1| exonuclease, SbcC family [Listeria monocytogenes str. 1/2a F6854] gi|254898187|ref|ZP_05258111.1| SbcC family exonuclease [Listeria monocytogenes J0161] gi|254912320|ref|ZP_05262332.1| exonuclease [Listeria monocytogenes J2818] gi|254936647|ref|ZP_05268344.1| exonuclease [Listeria monocytogenes F6900] gi|47014622|gb|EAL05581.1| exonuclease, SbcC family [Listeria monocytogenes str. 1/2a F6854] gi|258609244|gb|EEW21852.1| exonuclease [Listeria monocytogenes F6900] gi|293590302|gb|EFF98636.1| exonuclease [Listeria monocytogenes J2818] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|229127282|ref|ZP_04256278.1| Exonuclease SbcC [Bacillus cereus BDRD-Cer4] gi|228656115|gb|EEL11957.1| Exonuclease SbcC [Bacillus cereus BDRD-Cer4] Length = 518 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + +I + F+ T + L ++ G + GK+S+ A+ W+ + Sbjct: 1 MLANINEIFVEGFQSHT-NSHFNLGNGLNVITGPSDSGKTSIIRAVRWIAF 50 >gi|30019994|ref|NP_831625.1| exonuclease SbcC [Bacillus cereus ATCC 14579] gi|31415746|ref|NP_852486.1| Exonuclease SbcC [Bacillus phage phBC6A51] gi|29895539|gb|AAP08826.1| Exonuclease SbcC [Bacillus phage phBC6A51] Length = 518 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + +I + F+ T + L ++ G + GK+S+ A+ W+ + Sbjct: 1 MLANINEIFVEGFQSHT-NSHFNLGNGLNVITGPSDSGKTSIIRAVRWIAF 50 >gi|30020428|ref|NP_832059.1| exonuclease SbcC [Bacillus cereus ATCC 14579] gi|296502900|ref|YP_003664600.1| exonuclease SbcC [Bacillus thuringiensis BMB171] gi|29895979|gb|AAP09260.1| Exonuclease SbcC [Bacillus cereus ATCC 14579] gi|296323952|gb|ADH06880.1| exonuclease SbcC [Bacillus thuringiensis BMB171] Length = 1029 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|16803685|ref|NP_465170.1| hypothetical protein lmo1645 [Listeria monocytogenes EGD-e] gi|224501414|ref|ZP_03669721.1| hypothetical protein LmonFR_02667 [Listeria monocytogenes FSL R2-561] gi|16411081|emb|CAC99723.1| lmo1645 [Listeria monocytogenes EGD-e] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|315030491|gb|EFT42423.1| RecF/RecN/SMC protein [Enterococcus faecalis TX4000] Length = 801 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ +I F + L +++G NG+GK+++ +A+E + G R Sbjct: 23 KINKIYLKNFK-HVNEAEISFCNNDLVVLDGPNGFGKTTIFDAVELVMTGKISR 75 >gi|293392592|ref|ZP_06636912.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291424994|gb|EFE98203.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 1085 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F+ + L + G G GK++L +A+ Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFSSEPFASNGLFAITGPTGAGKTTLLDAVCLALYHQTPR 60 >gi|256852458|ref|ZP_05557834.1| predicted protein [Enterococcus faecalis T8] gi|256712312|gb|EEU27344.1| predicted protein [Enterococcus faecalis T8] Length = 790 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ +I F + L +++G NG+GK+++ +A+E + G R Sbjct: 12 KINKIYLKNFK-HVNEAEISFCNNDLVVLDGPNGFGKTTIFDAVELVMTGKISR 64 >gi|238920936|ref|YP_002934451.1| recombination and repair protein [Edwardsiella ictaluri 93-146] gi|238870505|gb|ACR70216.1| DNA repair protein RecN, putative [Edwardsiella ictaluri 93-146] Length = 553 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +++F E++ ++F +T + G+ G GKS +A+ G ++ ++ Sbjct: 2 LTQLTVANFAIVRELE-VDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMP 60 Query: 89 KRSI 92 + I Sbjct: 61 RADI 64 >gi|229547624|ref|ZP_04436349.1| RecF/RecN/SMC N domain protein [Enterococcus faecalis TX1322] gi|229307248|gb|EEN73235.1| RecF/RecN/SMC N domain protein [Enterococcus faecalis TX1322] Length = 801 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + +F+ +I F + L +++G NG+GK+++ +A+E + G R Sbjct: 23 KINKIYLKNFK-HVNEAEISFCNNDLVVLDGPNGFGKTTIFDAVELVMTGKISR 75 >gi|291297364|ref|YP_003508762.1| DNA replication and repair protein RecF [Meiothermus ruber DSM 1279] gi|290472323|gb|ADD29742.1| DNA replication and repair protein RecF [Meiothermus ruber DSM 1279] Length = 357 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +LL + +FR LT V G N GK++L EAIE G Sbjct: 1 MRLLRLRQKNFRNLFTPV-FAPGPGLTTVVGGNAQGKTNLLEAIELALGG 49 >gi|84995674|ref|XP_952559.1| DNA repair protein rad50 [Theileria annulata strain Ankara] gi|65302720|emb|CAI74827.1| DNA repair protein rad50, putative [Theileria annulata] Length = 1139 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + IEI R FT + ++F LT++ G+NG GK++L E+++ + G Sbjct: 4 INSIEIRGIRSFTPYRTEFLQFEKPLTLIVGKNGSGKTTLVESLKAVTSGT 54 >gi|85713966|ref|ZP_01044955.1| recombination protein F [Nitrobacter sp. Nb-311A] gi|85699092|gb|EAQ36960.1| recombination protein F [Nitrobacter sp. Nb-311A] Length = 381 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++L + +S FR ++ ++ ++ ++ G NG GK++ EAI L G RR D I Sbjct: 5 RILRLSLSQFRNYSSAA-LKTRSNMVVLAGPNGAGKTNCLEAISLLSPGRGLRRATRDDI 63 Query: 88 KK 89 Sbjct: 64 AD 65 >gi|315302809|ref|ZP_07873572.1| putative ATPase involved in DNA repair [Listeria ivanovii FSL F6-596] gi|313628828|gb|EFR97198.1| putative ATPase involved in DNA repair [Listeria ivanovii FSL F6-596] Length = 110 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 7/79 (8%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++FK + + +F+ + +++ + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KVVFK--QLTLENFKNHKNLV-VDY-EQVTQISGKNGFGKTSIGEAVTWLLYGT---DLL 54 Query: 84 GDSIKKRSIKTPMPMCMAV 102 G I+ + + T + +++ Sbjct: 55 GTKIEPQPLGTEEEVHVSL 73 >gi|227824004|ref|YP_002827977.1| recombination protein F [Sinorhizobium fredii NGR234] gi|227343006|gb|ACP27224.1| DNA replication and repair protein, RecF [Sinorhizobium fredii NGR234] Length = 470 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++++ FR + + +E ++ G+NG GK++L EAI +L G RR Sbjct: 102 VSLTRLKLTDFRNYAAL-SLELDQRHVVLTGENGAGKTNLMEAISFLSPGRGLRR 155 >gi|24212703|ref|NP_710184.1| recombination protein RecF [Leptospira interrogans serovar Lai str. 56601] gi|51316470|sp|Q8FA32|RECF_LEPIN RecName: Full=DNA replication and repair protein recF gi|24193334|gb|AAN47202.1| recombination protein RecF [Leptospira interrogans serovar Lai str. 56601] Length = 365 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E ++F L G NG GK++L EAI L + + R + Sbjct: 1 MFLKHLTIQNFRNH-EELSLDFDSRLIFFVGDNGEGKTNLLEAICILSWLKSFRESEDSN 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWGSE 66 >gi|307154734|ref|YP_003890118.1| hypothetical protein Cyan7822_4952 [Cyanothece sp. PCC 7822] gi|306984962|gb|ADN16843.1| conserved hypothetical protein [Cyanothece sp. PCC 7822] Length = 690 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KLL I+ +FR F + + TI++G NG GK+++ W+ Y Sbjct: 1 MKLLSIKFYNFRQFYGKTPEIILASGSQNTTIIHGNNGAGKTTILNGFTWVLYE 54 >gi|229826160|ref|ZP_04452229.1| hypothetical protein GCWU000182_01532 [Abiotrophia defectiva ATCC 49176] gi|229789030|gb|EEP25144.1| hypothetical protein GCWU000182_01532 [Abiotrophia defectiva ATCC 49176] Length = 1064 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + + F + + +I+F HL ++ G G GK+++ +AI + +G + Sbjct: 1 MRPKKLVMQAFGSYGKNTEIDFTKSKQHLFLITGDTGAGKTTIFDAIVFALFGEASSGYN 60 Query: 84 GDSIKKRSIK 93 S ++ + Sbjct: 61 KKSGEELQSQ 70 >gi|227512693|ref|ZP_03942742.1| exonuclease SbcC [Lactobacillus buchneri ATCC 11577] gi|227084158|gb|EEI19470.1| exonuclease SbcC [Lactobacillus buchneri ATCC 11577] Length = 1045 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + E + I+F + +++G+ G GK+++ +A+ + YG + Sbjct: 1 MKPLKLTLKNFGPY-ENEIIDFTKLDEASVFLISGKTGSGKTTIFDAMTFALYGDSASDD 59 Query: 83 HG-DSIKKRSIKTPMP 97 S++ T P Sbjct: 60 RTPQSMRSDFADTKTP 75 >gi|221633248|ref|YP_002522473.1| RecF/RecN/SMC N terminal domain-containing protein [Thermomicrobium roseum DSM 5159] gi|221155751|gb|ACM04878.1| RecF/RecN/SMC N terminal domain protein [Thermomicrobium roseum DSM 5159] Length = 850 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 30 LDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + HF + + +++F L ++G+NG GKS+L +A+ W + + Sbjct: 4 TRLVLRHFLCYRDPVEVDFTGLQLACLSGENGAGKSALLDAMTWALWEKARAS 56 >gi|194333974|ref|YP_002015834.1| SMC domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311792|gb|ACF46187.1| SMC domain protein [Prosthecochloris aestuarii DSM 271] Length = 1226 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F +D + ++ G G GKS++ +A+ YG T R Sbjct: 1 MKILQLCFRNLNSLQGTWSIDFTAPPYASDGIFLITGPTGAGKSTILDAVCIALYGQTPR 60 Query: 81 RKH 83 Sbjct: 61 LGR 63 >gi|167752977|ref|ZP_02425104.1| hypothetical protein ALIPUT_01240 [Alistipes putredinis DSM 17216] gi|167659291|gb|EDS03421.1| hypothetical protein ALIPUT_01240 [Alistipes putredinis DSM 17216] Length = 105 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 27 FKLLDIEISHFRGFTEIQ-----KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +FR + +I F + ++ G+N GK+++ +AI ++ + Sbjct: 1 MYLSILRLWNFRKYAGADNKPGLEIHFQKGVNVLIGENDSGKTAIVDAIRYVLRTQS 57 >gi|1321906|emb|CAA63259.1| recF [Mycobacterium tuberculosis H37Rv] Length = 385 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + +E T+ G NGYGK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHR 53 >gi|15839375|ref|NP_334412.1| recombination protein F [Mycobacterium tuberculosis CDC1551] gi|148821194|ref|YP_001285948.1| recombination protein F [Mycobacterium tuberculosis F11] gi|215405987|ref|ZP_03418168.1| recombination protein F [Mycobacterium tuberculosis 02_1987] gi|215413857|ref|ZP_03422522.1| recombination protein F [Mycobacterium tuberculosis 94_M4241A] gi|215425189|ref|ZP_03423108.1| recombination protein F [Mycobacterium tuberculosis T92] gi|215432908|ref|ZP_03430827.1| recombination protein F [Mycobacterium tuberculosis EAS054] gi|215448276|ref|ZP_03435028.1| recombination protein F [Mycobacterium tuberculosis T85] gi|218755719|ref|ZP_03534515.1| recombination protein F [Mycobacterium tuberculosis GM 1503] gi|219555774|ref|ZP_03534850.1| recombination protein F [Mycobacterium tuberculosis T17] gi|253796918|ref|YP_003029919.1| DNA replication and repair protein recF [Mycobacterium tuberculosis KZN 1435] gi|254233408|ref|ZP_04926734.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis C] gi|254366463|ref|ZP_04982507.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis str. Haarlem] gi|254548931|ref|ZP_05139378.1| recombination protein F [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260198987|ref|ZP_05766478.1| recombination protein F [Mycobacterium tuberculosis T46] gi|260203140|ref|ZP_05770631.1| recombination protein F [Mycobacterium tuberculosis K85] gi|289441370|ref|ZP_06431114.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T46] gi|289552253|ref|ZP_06441463.1| DNA replication and repair protein recF [Mycobacterium tuberculosis KZN 605] gi|289567885|ref|ZP_06448112.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T17] gi|289572579|ref|ZP_06452806.1| DNA replication and repair protein recF [Mycobacterium tuberculosis K85] gi|289747773|ref|ZP_06507151.1| recombination protein F [Mycobacterium tuberculosis 02_1987] gi|289748465|ref|ZP_06507843.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T92] gi|289756062|ref|ZP_06515440.1| recombination protein F [Mycobacterium tuberculosis EAS054] gi|289760100|ref|ZP_06519478.1| recombination protein F [Mycobacterium tuberculosis T85] gi|289764118|ref|ZP_06523496.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis GM 1503] gi|294995611|ref|ZP_06801302.1| recombination protein F [Mycobacterium tuberculosis 210] gi|297632471|ref|ZP_06950251.1| recombination protein F [Mycobacterium tuberculosis KZN 4207] gi|297729440|ref|ZP_06958558.1| recombination protein F [Mycobacterium tuberculosis KZN R506] gi|298527401|ref|ZP_07014810.1| recF protein [Mycobacterium tuberculosis 94_M4241A] gi|306778821|ref|ZP_07417158.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu002] gi|306782609|ref|ZP_07420931.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu003] gi|306786977|ref|ZP_07425299.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu004] gi|306791533|ref|ZP_07429835.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu005] gi|306795597|ref|ZP_07433899.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu006] gi|306801572|ref|ZP_07438240.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu008] gi|306805781|ref|ZP_07442449.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu007] gi|306970178|ref|ZP_07482839.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu009] gi|313656769|ref|ZP_07813649.1| recombination protein F [Mycobacterium tuberculosis KZN V2475] gi|13879044|gb|AAK44226.1| recF protein [Mycobacterium tuberculosis CDC1551] gi|124603201|gb|EAY61476.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis C] gi|134151975|gb|EBA44020.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis str. Haarlem] gi|148719721|gb|ABR04346.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis F11] gi|253318421|gb|ACT23024.1| DNA replication and repair protein recF [Mycobacterium tuberculosis KZN 1435] gi|289414289|gb|EFD11529.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T46] gi|289436885|gb|EFD19378.1| DNA replication and repair protein recF [Mycobacterium tuberculosis KZN 605] gi|289537010|gb|EFD41588.1| DNA replication and repair protein recF [Mycobacterium tuberculosis K85] gi|289541638|gb|EFD45287.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T17] gi|289688301|gb|EFD55789.1| recombination protein F [Mycobacterium tuberculosis 02_1987] gi|289689052|gb|EFD56481.1| DNA replication and repair protein recF [Mycobacterium tuberculosis T92] gi|289696649|gb|EFD64078.1| recombination protein F [Mycobacterium tuberculosis EAS054] gi|289711624|gb|EFD75640.1| DNA replication and repair protein recF (single-strand DNA binding protein) [Mycobacterium tuberculosis GM 1503] gi|289715664|gb|EFD79676.1| recombination protein F [Mycobacterium tuberculosis T85] gi|298497195|gb|EFI32489.1| recF protein [Mycobacterium tuberculosis 94_M4241A] gi|308328158|gb|EFP17009.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu002] gi|308332532|gb|EFP21383.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu003] gi|308336275|gb|EFP25126.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu004] gi|308339880|gb|EFP28731.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu005] gi|308343893|gb|EFP32744.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu006] gi|308347677|gb|EFP36528.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu007] gi|308351595|gb|EFP40446.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu008] gi|308352302|gb|EFP41153.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu009] gi|326905762|gb|EGE52695.1| DNA replication and repair protein recF [Mycobacterium tuberculosis W-148] gi|328456709|gb|AEB02132.1| DNA replication and repair protein recF [Mycobacterium tuberculosis KZN 4207] Length = 385 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + +E T+ G NGYGK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHR 53 >gi|31791180|ref|NP_853673.1| recombination protein F [Mycobacterium bovis AF2122/97] gi|121635886|ref|YP_976109.1| recombination protein F [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121635913|ref|YP_976136.1| recombination protein F [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988386|ref|YP_002643053.1| DNA replication and repair protein [Mycobacterium bovis BCG str. Tokyo 172] gi|51316336|sp|Q7U314|RECF_MYCBO RecName: Full=DNA replication and repair protein recF gi|254790483|sp|C1AJ00|RECF_MYCBT RecName: Full=DNA replication and repair protein recF gi|31616765|emb|CAD92865.1| DNA REPLICATION AND REPAIR PROTEIN RECF (SINGLE-STRAND DNA BINDING PROTEIN) [Mycobacterium bovis AF2122/97] gi|121491533|emb|CAL69987.1| dna replication and repair protein recF [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121491560|emb|CAL70017.1| Dna replication and repair protein recF [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771499|dbj|BAH24305.1| DNA replication and repair protein [Mycobacterium bovis BCG str. Tokyo 172] Length = 385 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + +E T+ G NGYGK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHR 53 >gi|15607145|ref|NP_214517.1| recombination protein F [Mycobacterium tuberculosis H37Rv] gi|148659760|ref|YP_001281283.1| recombination protein F [Mycobacterium tuberculosis H37Ra] gi|167969466|ref|ZP_02551743.1| recombination protein F [Mycobacterium tuberculosis H37Ra] gi|306778291|ref|ZP_07416628.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu001] gi|306974410|ref|ZP_07487071.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu010] gi|307082118|ref|ZP_07491288.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu011] gi|307086729|ref|ZP_07495842.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu012] gi|2842621|sp|Q59586|RECF_MYCTU RecName: Full=DNA replication and repair protein recF gi|166220718|sp|A5TY71|RECF_MYCTA RecName: Full=DNA replication and repair protein recF gi|1552556|emb|CAB02424.1| DNA REPLICATION AND REPAIR PROTEIN RECF (SINGLE-STRAND DNA BINDING PROTEIN) [Mycobacterium tuberculosis H37Rv] gi|148503912|gb|ABQ71721.1| DNA replication and repair protein RecF [Mycobacterium tuberculosis H37Ra] gi|308213441|gb|EFO72840.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu001] gi|308356305|gb|EFP45156.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu010] gi|308360192|gb|EFP49043.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu011] gi|308363879|gb|EFP52730.1| DNA replication and repair protein recF [Mycobacterium tuberculosis SUMu012] Length = 385 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + +E T+ G NGYGK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHR 53 >gi|331268585|ref|YP_004395077.1| exonuclease [Clostridium botulinum BKT015925] gi|329125135|gb|AEB75080.1| exonuclease, putative [Clostridium botulinum BKT015925] Length = 1176 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K ++IS F Q IEF L + G G GKS++ +AI YG R Sbjct: 1 MKPRLLKISGLNSFENQQIIEFDKLTEKGLFGIFGPTGSGKSTILDAITIALYGKITRTN 60 Query: 83 HG 84 G Sbjct: 61 KG 62 >gi|312899706|ref|ZP_07759029.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0470] gi|311293138|gb|EFQ71694.1| RecF/RecN/SMC protein [Enterococcus faecalis TX0470] Length = 450 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + K+ +E+ + + + + LTI+ G N GK+S+ +AI W G + Sbjct: 13 SENMAVKINSLEVENVKRVKAVVIQPNENGLTILGGNNNQGKTSVLDAIAWALGGNKYK 71 >gi|299820838|ref|ZP_07052727.1| recombination protein F [Listeria grayi DSM 20601] gi|299817859|gb|EFI85094.1| recombination protein F [Listeria grayi DSM 20601] Length = 369 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 16/94 (17%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + +FR + ++ ++F+ + + G+N GK++L EAI L + R + Sbjct: 1 MHLENMVLRNFRNYPFLE-VDFSPAVNVFLGENAQGKTNLLEAILMLALAKSHRTANDKD 59 Query: 87 IK--------------KRSIKTPMPMCMAVPRCK 106 +R P+ + M P+ K Sbjct: 60 FINWDSEEAKIEGRVFRRGQSVPLEL-MITPKGK 92 >gi|170025495|ref|YP_001722000.1| SMC domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|169752029|gb|ACA69547.1| SMC domain protein [Yersinia pseudotuberculosis YPIII] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|163789562|ref|ZP_02184000.1| exonuclease sbcC [Carnobacterium sp. AT7] gi|159875094|gb|EDP69160.1| exonuclease sbcC [Carnobacterium sp. AT7] Length = 1019 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + ++ F + E I+F L +V+G G GK+++ +AI + Y Sbjct: 1 MRPLKLVMNAFGPYKEKVVIDFTQFQQQTLFLVSGPTGAGKTTIFDAIAYALYDDASGTS 60 Query: 83 HGDSIKKRSIKTPMPMC 99 G K + +C Sbjct: 61 RGKDSFKSQFASDEVLC 77 >gi|108808691|ref|YP_652607.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua] gi|167399182|ref|ZP_02304706.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|108780604|gb|ABG14662.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua] gi|167051686|gb|EDR63094.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 1080 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|22124883|ref|NP_668306.1| ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10] gi|45440575|ref|NP_992114.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus str. 91001] gi|108811047|ref|YP_646814.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516] gi|145600099|ref|YP_001164175.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F] gi|166010994|ref|ZP_02231892.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212888|ref|ZP_02238923.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167423530|ref|ZP_02315283.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229896034|ref|ZP_04511204.1| Exonuclease SbcC [Yersinia pestis Pestoides A] gi|229901272|ref|ZP_04516394.1| Exonuclease SbcC [Yersinia pestis Nepal516] gi|270489461|ref|ZP_06206535.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27] gi|294504933|ref|YP_003568995.1| periplasmic binding transport protein [Yersinia pestis Z176003] gi|21957717|gb|AAM84557.1|AE013701_2 ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10] gi|45435432|gb|AAS60991.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus str. 91001] gi|108774695|gb|ABG17214.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516] gi|145211795|gb|ABP41202.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F] gi|165989994|gb|EDR42295.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205675|gb|EDR50155.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167057700|gb|EDR67446.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681201|gb|EEO77295.1| Exonuclease SbcC [Yersinia pestis Nepal516] gi|229700957|gb|EEO88986.1| Exonuclease SbcC [Yersinia pestis Pestoides A] gi|262362997|gb|ACY59718.1| periplasmic binding transport protein [Yersinia pestis D106004] gi|262366921|gb|ACY63478.1| periplasmic binding transport protein [Yersinia pestis D182038] gi|270337965|gb|EFA48742.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27] gi|294355392|gb|ADE65733.1| periplasmic binding transport protein [Yersinia pestis Z176003] gi|320016392|gb|ADV99963.1| Exonuclease SbcC [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|68536328|ref|YP_251033.1| hypothetical protein jk1249 [Corynebacterium jeikeium K411] gi|68263927|emb|CAI37415.1| hypothetical protein jk1249 [Corynebacterium jeikeium K411] Length = 543 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+G + + F+ ++ G NG GKS+L EAI G Sbjct: 2 ISKVRIRNFKGL-QNYEATFSPQYNVIVGANGAGKSTLLEAIGLAIGG 48 >gi|51595265|ref|YP_069456.1| ATP-dependent dsDNA exonuclease [Yersinia pseudotuberculosis IP 32953] gi|186894282|ref|YP_001871394.1| SMC domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51588547|emb|CAH20155.1| putative ATP-dependent dsDNA exonuclease [Yersinia pseudotuberculosis IP 32953] gi|186697308|gb|ACC87937.1| SMC domain protein [Yersinia pseudotuberculosis PB1/+] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|12597247|dbj|BAB21523.1| UVS6 [Neurospora crassa] Length = 1314 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL + I R F I F LT++ G NG GK+++ E +++ G Sbjct: 3 KLEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTG 53 >gi|19075000|ref|NP_586506.1| putative NUCLEAR PROTEIN OF THE SMC FAMILY [Encephalitozoon cuniculi GB-M1] gi|19069725|emb|CAD26110.1| putative NUCLEAR PROTEIN OF THE SMC FAMILY [Encephalitozoon cuniculi GB-M1] Length = 1025 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +E+ +F+ F + + F + G NG GKSS++ A+ +F G + G ++ Sbjct: 9 IVSMELENFQTF-KKMSLGFCSSFNFIAGPNGSGKSSIANAMVLVFGGTPKVIGRGKTV 66 >gi|165926650|ref|ZP_02222482.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016] gi|165935941|ref|ZP_02224511.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275] gi|167421647|ref|ZP_02313400.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167468102|ref|ZP_02332806.1| hypothetical protein YpesF_09434 [Yersinia pestis FV-1] gi|229838813|ref|ZP_04458972.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899381|ref|ZP_04514524.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195] gi|165916086|gb|EDR34693.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275] gi|165921578|gb|EDR38775.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016] gi|166960566|gb|EDR56587.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229687783|gb|EEO79856.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195] gi|229695179|gb|EEO85226.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2] Length = 1235 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|162421047|ref|YP_001607635.1| nuclease SbcCD, C subunit [Yersinia pestis Angola] gi|162353862|gb|ABX87810.1| nuclease SbcCD, C subunit [Yersinia pestis Angola] Length = 1220 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|153949358|ref|YP_001402099.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758] gi|152960853|gb|ABS48314.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758] Length = 1229 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|85111188|ref|XP_963818.1| hypothetical protein NCU00901 [Neurospora crassa OR74A] gi|28925556|gb|EAA34582.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|38636462|emb|CAE81997.1| RAD50 homolog uvs-6 [Neurospora crassa] Length = 1314 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL + I R F I F LT++ G NG GK+++ E +++ G Sbjct: 3 KLEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTG 53 >gi|290769882|gb|ADD61653.1| putative protein [uncultured organism] Length = 831 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + ++ F + ++ L ++ G G GK++L +AI + YG T Sbjct: 1 MKPLHLTLNAFGPYAGRTDLDLSVFGGSGLFLIGGDTGAGKTALFDAITFALYGETTGEN 60 Query: 83 HGDSIKKRSIKTP 95 ++ + P Sbjct: 61 RKTTMLRSDFAAP 73 >gi|302380511|ref|ZP_07268976.1| DNA repair protein RecN [Finegoldia magna ACS-171-V-Col3] gi|302311454|gb|EFK93470.1| DNA repair protein RecN [Finegoldia magna ACS-171-V-Col3] Length = 565 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + ++F + L I+ G+ G GKS L EA E L +R + I+ Sbjct: 2 LNSLYIENF-AIIDKINVDFTEGLNIITGETGSGKSILIEAFELLLG----QRFNKSFIR 56 Query: 89 KRSIKT 94 S KT Sbjct: 57 DSSKKT 62 >gi|304310221|ref|YP_003809819.1| Putative GTP-binding protein [gamma proteobacterium HdN1] gi|301795954|emb|CBL44155.1| Putative GTP-binding protein [gamma proteobacterium HdN1] Length = 899 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KLL + I FR F +I + + G N GKS+L+ AI F+ + D Sbjct: 1 MKLLSLRIEQFRQFRTPIEISGLNAGINLFVGPNESGKSTLANAIRAAFFERHKSNTVED 60 >gi|258648251|ref|ZP_05735720.1| exonuclease SbcC [Prevotella tannerae ATCC 51259] gi|260852157|gb|EEX72026.1| exonuclease SbcC [Prevotella tannerae ATCC 51259] Length = 1252 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + +++ F +Q I+F + L + G G GKS+L +AI YG R Sbjct: 1 MKIDKVTLNNLTSFEGLQTIDFTTEPLRSAGLFAITGDTGAGKSTLLDAICLALYGRAPR 60 >gi|222099107|ref|YP_002533675.1| hypothetical protein CTN_0133 [Thermotoga neapolitana DSM 4359] gi|221571497|gb|ACM22309.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359] Length = 758 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I F F + + D L IV G N GK++L+ I + G + Sbjct: 1 MKIRQVYIEGFGKFEDF-SLNLKDGLNIVFGGNAAGKTTLANFIRYCLTGNLAK 53 >gi|217964203|ref|YP_002349881.1| exonuclease, SbcC family [Listeria monocytogenes HCC23] gi|217333473|gb|ACK39267.1| exonuclease, SbcC family [Listeria monocytogenes HCC23] gi|307571230|emb|CAR84409.1| exonuclease, SbcC family [Listeria monocytogenes L99] Length = 1023 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|303233767|ref|ZP_07320421.1| DNA repair protein RecN [Finegoldia magna BVS033A4] gi|302495201|gb|EFL54953.1| DNA repair protein RecN [Finegoldia magna BVS033A4] Length = 565 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + ++F + L I+ G+ G GKS L EA E L +R + I+ Sbjct: 2 LNSLYIENF-AIIDKINVDFTEGLNIITGETGSGKSILIEAFELLLG----QRFNKSFIR 56 Query: 89 KRSIKT 94 S KT Sbjct: 57 DSSKKT 62 >gi|303234050|ref|ZP_07320699.1| RecF/RecN/SMC N-terminal domain protein [Finegoldia magna BVS033A4] gi|302494975|gb|EFL54732.1| RecF/RecN/SMC N-terminal domain protein [Finegoldia magna BVS033A4] Length = 646 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL++++I +F+G + I+FA T ++G+NG GK+++ +A WL + + + Sbjct: 3 IKLIELKIENFKGIKNLV-IDFAK-TTHISGRNGIGKTTVFDAYSWLLWDKDSSNRKDFN 60 Query: 87 IK 88 IK Sbjct: 61 IK 62 >gi|307725761|ref|YP_003908974.1| SMC domain-containing protein [Burkholderia sp. CCGE1003] gi|307586286|gb|ADN59683.1| SMC domain protein [Burkholderia sp. CCGE1003] Length = 874 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGRLFIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|323528014|ref|YP_004230166.1| SMC domain-containing protein [Burkholderia sp. CCGE1001] gi|323385016|gb|ADX57106.1| SMC domain protein [Burkholderia sp. CCGE1001] Length = 874 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGRLFIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|209522031|ref|ZP_03270689.1| SMC domain protein [Burkholderia sp. H160] gi|209497532|gb|EDZ97729.1| SMC domain protein [Burkholderia sp. H160] Length = 873 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I FR F+ I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQRIAIQEFRQFSGQLVIDDLQPGLNLFIGPNEAGKSTIAEAVRTVFLERYKASHLKD 60 >gi|170690477|ref|ZP_02881644.1| SMC domain protein [Burkholderia graminis C4D1M] gi|170144912|gb|EDT13073.1| SMC domain protein [Burkholderia graminis C4D1M] Length = 874 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I I F+ FT I+ L + G N GKS+++EA+ +F + D Sbjct: 1 MKLQSIAIQEFKQFTGRLFIDDLQPGLNLFVGPNEAGKSTIAEAVRAVFLERYKASHLKD 60 >gi|37523420|ref|NP_926797.1| hypothetical protein gll3851 [Gloeobacter violaceus PCC 7421] gi|35214424|dbj|BAC91792.1| gll3851 [Gloeobacter violaceus PCC 7421] Length = 500 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L ++IS F+ + F T + G NG GKS+L +AI +L Sbjct: 2 LTRLKISGFKNLV-NVDVRFGP-FTCIAGANGVGKSNLFDAITFL 44 >gi|288959568|ref|YP_003449909.1| DNA replication and repair protein [Azospirillum sp. B510] gi|288911876|dbj|BAI73365.1| DNA replication and repair protein [Azospirillum sp. B510] Length = 394 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FRG+ + ++E + G NG GK++L EA+ +L G R ++ Sbjct: 20 VRRMTLTRFRGY-DSVRLEPDHRPVALIGPNGAGKTNLLEAVSFLAPGRGLRGARLAEVE 78 Query: 89 KRSI 92 + Sbjct: 79 RLGS 82 >gi|285016824|ref|YP_003374535.1| DNA replication and repair protein RecF [Xanthomonas albilineans GPE PC73] gi|283472042|emb|CBA14549.1| probable dna replication and repair protein recf [Xanthomonas albilineans] Length = 366 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ H R F I+ A + ++ G NG GK+++ EA+ + YG + R + D Sbjct: 1 MHLFRLDFHHLRRFPSIELTP-APGMNLITGDNGAGKTTILEAMHLMAYGRSFRCRVRDG 59 Query: 87 IKKRSI 92 + ++ Sbjct: 60 LIRQGQ 65 >gi|256821293|ref|YP_003145256.1| hypothetical protein Kkor_0066 [Kangiella koreensis DSM 16069] gi|256794832|gb|ACV25488.1| conserved hypothetical protein [Kangiella koreensis DSM 16069] Length = 661 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ I IS+FR F+E + + F + +T G NG GKS+L A++ +F + R Sbjct: 1 MEIEKISISNFRCFSEAEAVIFMESDITCFVGNNGTGKSALILALKRIFGSTREER 56 >gi|92115636|ref|YP_575365.1| recombination protein F [Nitrobacter hamburgensis X14] gi|91798530|gb|ABE60905.1| DNA replication and repair protein RecF [Nitrobacter hamburgensis X14] Length = 379 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + +E + ++ G NG GK++ EAI L G RR + + Sbjct: 5 RIRRLSLTHFRNYRAAA-LETRSDVVVLVGPNGAGKTNCLEAISLLSPGRGLRRATREEV 63 Query: 88 KK 89 Sbjct: 64 AD 65 >gi|24753765|gb|AAN64013.1|AF434658_10 recombination protein RecF [Leptospira interrogans] Length = 365 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E ++F L G NG GK++L EAI L + + R + Sbjct: 1 MFLKHLTIQNFRNH-EELSLDFDSRLIFFVGDNGEGKTNLLEAICILSWLKSFRESEDSN 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWGSE 66 >gi|47565717|ref|ZP_00236757.1| exonuclease SbcC, putative [Bacillus cereus G9241] gi|47557353|gb|EAL15681.1| exonuclease SbcC, putative [Bacillus cereus G9241] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|271969275|ref|YP_003343471.1| ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270512450|gb|ACZ90728.1| ATPase-like protein [Streptosporangium roseum DSM 43021] Length = 362 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 12/78 (15%) Query: 29 LLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYG--------YTQ 79 + IEI F+ F + + G N GKS+L +A+ ++ + Sbjct: 2 ITRIEIDGFKSFLN---FDLDVPPFLALVGPNSSGKSNLFDAVGYVADEIVGSGGLLDAR 58 Query: 80 RRKHGDSIKKRSIKTPMP 97 R G+ + + TP+P Sbjct: 59 RGLPGEQFHRVARGTPVP 76 >gi|226224246|ref|YP_002758353.1| ATP-dependent dsDNA exonuclease SbcC [Listeria monocytogenes Clip81459] gi|225876708|emb|CAS05417.1| Putative ATP-dependent dsDNA exonuclease SbcC [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|225026449|ref|ZP_03715641.1| hypothetical protein EUBHAL_00698 [Eubacterium hallii DSM 3353] gi|224956241|gb|EEG37450.1| hypothetical protein EUBHAL_00698 [Eubacterium hallii DSM 3353] Length = 102 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +F+ T+++ + F + ++ G NG GKSS+ EAI G Sbjct: 1 MYLNKVTVKNFKAITDME-LSFTPGVNLLIGDNGTGKSSMLEAIGVAISG 49 >gi|169824534|ref|YP_001692145.1| DNA repair and genetic recombination protein [Finegoldia magna ATCC 29328] gi|167831339|dbj|BAG08255.1| DNA repair and genetic recombination protein [Finegoldia magna ATCC 29328] Length = 565 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + ++F + L I+ G+ G GKS L EA E L +R + I+ Sbjct: 2 LNSLYIENF-AIIDKINVDFTEGLNIITGETGSGKSILIEAFELLLG----QRFNKSFIR 56 Query: 89 KRSIKT 94 S KT Sbjct: 57 DSSKKT 62 >gi|152988436|ref|YP_001350185.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7] gi|150963594|gb|ABR85619.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7] Length = 1211 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + Q+I+F L + G G GKS++ +A+ +G T R Sbjct: 1 MKILAIRLKNLASLGGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 >gi|119493422|ref|XP_001263901.1| DNA repair protein Rad18, putative [Neosartorya fischeri NRRL 181] gi|119412061|gb|EAW22004.1| DNA repair protein Rad18, putative [Neosartorya fischeri NRRL 181] Length = 1137 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 97 LERVECYNFMCH-DHFRVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 155 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 156 -SFIKEGKESATIIVRLKNQ 174 >gi|21325599|dbj|BAC00220.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum ATCC 13032] Length = 231 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 23/34 (67%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 FR E + ++F +T++ G+NG GKS+L EAI Sbjct: 14 FRVLREKRMLDFRAPITVITGENGVGKSTLLEAI 47 >gi|19554015|ref|NP_602017.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum ATCC 13032] gi|62391663|ref|YP_227065.1| ABC-type transport system, ATPase component [Corynebacterium glutamicum ATCC 13032] gi|41327005|emb|CAF20849.1| ABC-type transport system, ATPase component [Corynebacterium glutamicum ATCC 13032] Length = 244 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 23/34 (67%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 FR E + ++F +T++ G+NG GKS+L EAI Sbjct: 27 FRVLREKRMLDFRAPITVITGENGVGKSTLLEAI 60 >gi|47093681|ref|ZP_00231435.1| exonuclease, SbcC family [Listeria monocytogenes str. 4b H7858] gi|47017942|gb|EAL08721.1| exonuclease, SbcC family [Listeria monocytogenes str. 4b H7858] gi|328465006|gb|EGF36285.1| ATP-dependent dsDNA exonuclease SbcC [Listeria monocytogenes 1816] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|322412900|gb|EFY03808.1| recombination protein F [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLTSFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|313623506|gb|EFR93699.1| exonuclease SbcC, putative [Listeria innocua FSL J1-023] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|289434931|ref|YP_003464803.1| exonuclease, SbcC family, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171175|emb|CBH27717.1| exonuclease, SbcC family, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|257876738|ref|ZP_05656391.1| exonuclease SbcC [Enterococcus casseliflavus EC20] gi|257810904|gb|EEV39724.1| exonuclease SbcC [Enterococcus casseliflavus EC20] Length = 1042 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ +F F + K++F+ L +++G+ G GK+++ + + + +G T Sbjct: 1 MQPKSLQMKNFGPFIDE-KLDFSQLQAGGLFLISGKTGAGKTTIFDGMTFALFGETSGNL 59 Query: 83 HGDSIKKRSIKTP 95 + +P Sbjct: 60 RSGKEMRSMFASP 72 >gi|254991797|ref|ZP_05273987.1| SbcC family exonuclease [Listeria monocytogenes FSL J2-064] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|290893238|ref|ZP_06556225.1| SbcC family exonuclease [Listeria monocytogenes FSL J2-071] gi|290557220|gb|EFD90747.1| SbcC family exonuclease [Listeria monocytogenes FSL J2-071] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|197334005|ref|YP_002154783.1| DNA replication and repair protein RecF [Vibrio fischeri MJ11] gi|226737848|sp|B5FEV5|RECF_VIBFM RecName: Full=DNA replication and repair protein recF gi|197315495|gb|ACH64942.1| DNA replication and repair protein RecF [Vibrio fischeri MJ11] Length = 359 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I+ FR T I+ + V G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIINDFRNIT-TCDIQLSPGFNFVIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|159477821|ref|XP_001697007.1| structural maintenance of chromosomes protein 6B [Chlamydomonas reinhardtii] gi|158274919|gb|EDP00699.1| structural maintenance of chromosomes protein 6B [Chlamydomonas reinhardtii] Length = 1106 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I++ +F ++ +EF H+T ++GQNG GKS++ + ++ + G ++ Sbjct: 300 LRRIQLINFMCHKNLE-VEFGPHVTFLSGQNGSGKSAVLQGLQACLGASARDTSRGSNL 357 >gi|254931584|ref|ZP_05264943.1| SbcC family exonuclease [Listeria monocytogenes HPB2262] gi|293583139|gb|EFF95171.1| SbcC family exonuclease [Listeria monocytogenes HPB2262] gi|328474033|gb|EGF44844.1| SbcC family exonuclease [Listeria monocytogenes 220] gi|332312086|gb|EGJ25181.1| Exonuclease SbcC [Listeria monocytogenes str. Scott A] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|46907874|ref|YP_014263.1| SbcC family exonuclease [Listeria monocytogenes serotype 4b str. F2365] gi|254824295|ref|ZP_05229296.1| SbcC family exonuclease [Listeria monocytogenes FSL J1-194] gi|254852267|ref|ZP_05241615.1| SbcC family exonuclease [Listeria monocytogenes FSL R2-503] gi|255520941|ref|ZP_05388178.1| SbcC family exonuclease [Listeria monocytogenes FSL J1-175] gi|300766135|ref|ZP_07076101.1| SbcC exonuclease [Listeria monocytogenes FSL N1-017] gi|46881143|gb|AAT04440.1| SbcC exonuclease family protein [Listeria monocytogenes serotype 4b str. F2365] gi|258605575|gb|EEW18183.1| SbcC family exonuclease [Listeria monocytogenes FSL R2-503] gi|293593529|gb|EFG01290.1| SbcC family exonuclease [Listeria monocytogenes FSL J1-194] gi|300513158|gb|EFK40239.1| SbcC exonuclease [Listeria monocytogenes FSL N1-017] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|45655917|ref|YP_000003.1| DNA repair and genetic recombination protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|51316280|sp|Q72WD4|RECF_LEPIC RecName: Full=DNA replication and repair protein recF gi|45599150|gb|AAS68640.1| DNA repair and genetic recombination protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 365 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR E ++F L G NG GK++L EAI L + + R + Sbjct: 1 MFLKHLTIQNFRNH-EELSLDFDSRLIFFVGDNGEGKTNLLEAICILSWLKSFRESEDSN 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWGSE 66 >gi|226943286|ref|YP_002798359.1| ATP-dependent dsDNA exonuclease SbcC [Azotobacter vinelandii DJ] gi|226718213|gb|ACO77384.1| ATP-dependent dsDNA exonuclease SbcC [Azotobacter vinelandii DJ] Length = 1137 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 12/85 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFREAPFRDNGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPRC 105 + + S ++ M C Sbjct: 61 ------MDRLSKESNELMTRHTAEC 79 >gi|159485062|ref|XP_001700568.1| structural maintenance of chromosomes protein 4 [Chlamydomonas reinhardtii] gi|158272208|gb|EDO98012.1| structural maintenance of chromosomes protein 4 [Chlamydomonas reinhardtii] Length = 1237 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 15/90 (16%) Query: 29 LLDIEISHFRGFTEIQKI-EFAD-------------HLTIVNGQNGYGKSSLSEAIEWLF 74 + ++ + +F+ + Q++ F + V G NG GKS++ +A+ ++F Sbjct: 19 IREMVLENFKSYAGEQRVGPFHKASCKAHNHNNLLQSFSAVVGPNGSGKSNVIDAMLFVF 78 Query: 75 YGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 G ++ + + + + + R Sbjct: 79 -GRRAKQLRFNKVSELIHNSQNHSNLEYAR 107 >gi|313632980|gb|EFR99906.1| exonuclease SbcC, putative [Listeria seeligeri FSL N1-067] Length = 1023 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|313157427|gb|EFR56849.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 349 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI---EWLFYGYTQRRKH 83 + I + +F+ FT I+F L+++ G N GKS++ A+ E+ + Sbjct: 1 MHIESITLKNFKKFTSKT-IKFHQGLSLLVGGNNEGKSTILHALAVWEFCKTFLVINKGQ 59 Query: 84 G 84 G Sbjct: 60 G 60 >gi|311029441|ref|ZP_07707531.1| nuclease SbcCD, C subunit [Bacillus sp. m3-13] Length = 1141 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + I+ F E Q ++F + + G G GKSS+ + + YG +R Sbjct: 1 MKPITLTIAGLHSFREKQIVDFESLCEGGVFGIFGPTGSGKSSILDGMTLALYGKVER 58 >gi|302387817|ref|YP_003823639.1| hypothetical protein Closa_3490 [Clostridium saccharolyticum WM1] gi|302198445|gb|ADL06016.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 687 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK--HG 84 KL +++ ++R F E ++I D LT + G N GK++ A+ +F + R G Sbjct: 1 MKLAKLKLYNYRSFGESEQIINFDELTALIGNNSSGKTAALNALNTIFSENSSDRILERG 60 Query: 85 D 85 D Sbjct: 61 D 61 >gi|298676002|ref|YP_003727752.1| SMC domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288990|gb|ADI74956.1| SMC domain protein [Methanohalobium evestigatum Z-7303] Length = 888 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRKH 83 KL + + + R + E + F + +++V+G NG GKSSL EA +G ++ Sbjct: 1 MKLKRLYVENIRSY-EYLDLSFNNGVSVVSGANGSGKSSLLEAFFTGLFGSRTLSKEYVL 59 Query: 84 GDSIKKRSIK 93 D I+K + K Sbjct: 60 ADMIRKGASK 69 >gi|256376563|ref|YP_003100223.1| hypothetical protein Amir_2437 [Actinosynnema mirum DSM 43827] gi|255920866|gb|ACU36377.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827] Length = 1277 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGYTQRRKH 83 ++ + + + F + ++ LT+V G N GKS+ +A+ W + R Sbjct: 1 MRITRLVLERYGAFADRA-VDLGPGLTLVLGPNETGKSTALDALADLLWSIPQQSGRAFR 59 >gi|255513288|gb|EET89554.1| SMC domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 767 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ +++ K+EF + ++ G G GKSS+ +AI + +G K G IK Sbjct: 2 IRSIELINWKTHR-HTKLEFRKGVNVLIGVMGAGKSSVMDAISFSLFGTFPALKQG-RIK 59 Query: 89 KRSIKTPMP 97 I T P Sbjct: 60 LDGIPTNRP 68 >gi|119510616|ref|ZP_01629746.1| ATPase [Nodularia spumigena CCY9414] gi|119464777|gb|EAW45684.1| ATPase [Nodularia spumigena CCY9414] Length = 353 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +++ +F+ F +F D T ++ G NG GK+SL +AI T Sbjct: 1 MKIQSLQLKYFKKFRSSPVFDFTDQETGLARDIIVLIGMNGAGKTSLLQAIASTLGTATG 60 Query: 80 R 80 R Sbjct: 61 R 61 >gi|320324204|gb|EFW80284.1| hypothetical protein PsgB076_13562 [Pseudomonas syringae pv. glycinea str. B076] gi|320328634|gb|EFW84635.1| hypothetical protein PsgRace4_18048 [Pseudomonas syringae pv. glycinea str. race 4] gi|330882360|gb|EGH16509.1| hypothetical protein Pgy4_26015 [Pseudomonas syringae pv. glycinea str. race 4] Length = 639 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHG 84 KL + IS+F+ F + I F D +T + G NG GK+++ +A+ + RR Sbjct: 1 MKLCSLRISNFQSFGPQPTPITFED-ITYLLGPNGAGKTAVLQALCRLFAFEPGLRRVRS 59 Query: 85 DS 86 Sbjct: 60 SD 61 >gi|198282434|ref|YP_002218755.1| ATP-dependent endonuclease, OLD family [Acidithiobacillus ferrooxidans ATCC 53993] gi|198246955|gb|ACH82548.1| ATP-dependent endonuclease, OLD family [Acidithiobacillus ferrooxidans ATCC 53993] Length = 773 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +FR + +++FAD LTI G N GK+S + AIE G + Sbjct: 1 MYVHSLAFKNFRRLKD-ARVDFADDLTIFVGANNSGKTSATHAIELFLSGGKDK 53 >gi|163847799|ref|YP_001635843.1| SMC domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525668|ref|YP_002570139.1| SMC domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669088|gb|ABY35454.1| SMC domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449547|gb|ACM53813.1| SMC domain protein [Chloroflexus sp. Y-400-fl] Length = 1032 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 7/86 (8%) Query: 30 LDIEISHFRGFT-----EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F + + +++ H+ ++G+NG GKS+L +AI W +G RR Sbjct: 4 LQLALRNFMCYRATENGDPLRLDLDGLHVLCLSGENGAGKSTLLDAITWALWGE-ARRPD 62 Query: 84 GDSIKKRSIKTPMPMCMAVPRCKYQL 109 D I + + + + A+ KY++ Sbjct: 63 DDLITQGETEMMVELVFALDGRKYRV 88 >gi|67623709|ref|XP_668137.1| RAD50 DNA repair protein-related [Cryptosporidium hominis TU502] gi|54659321|gb|EAL37903.1| RAD50 DNA repair protein-related [Cryptosporidium hominis] Length = 585 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F+ ++ I F +T++ GQNG GK+++ E ++ G Sbjct: 4 LEKLVICGVRSFSPDRREGIAFESPITLIVGQNGSGKTTIIECLKASISG 53 >gi|66362212|ref|XP_628070.1| RAD50 [Cryptosporidium parvum Iowa II] gi|46227665|gb|EAK88600.1| RAD50 [Cryptosporidium parvum Iowa II] Length = 1062 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F+ ++ I F +T++ GQNG GK+++ E ++ G Sbjct: 15 LEKLVICGVRSFSPDRREGIAFESPITLIVGQNGSGKTTIIECLKASISG 64 >gi|312217783|emb|CBX97730.1| similar to DNA repair protein rad50 [Leptosphaeria maculans] Length = 1321 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + I R F + I F LT++ G NG GK+++ E++++ G Sbjct: 3 KIERMMIQGIRSFGPEKAEVIIFTAPLTLIVGWNGSGKTTIIESLKYATTG 53 >gi|167626644|ref|YP_001677144.1| DNA repair protein RecN [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596645|gb|ABZ86643.1| DNA repair protein RecN [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 549 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + I +F + +I+F + +T++ G+ G GKS L +A+ ++ ++ Sbjct: 2 LQHLAIKNF-AIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEK 52 >gi|167639733|ref|ZP_02398003.1| putative exonuclease [Bacillus anthracis str. A0193] gi|177649232|ref|ZP_02932234.1| putative exonuclease [Bacillus anthracis str. A0174] gi|254737386|ref|ZP_05195090.1| putative exonuclease [Bacillus anthracis str. Western North America USA6153] gi|167512442|gb|EDR87818.1| putative exonuclease [Bacillus anthracis str. A0193] gi|172084306|gb|EDT69364.1| putative exonuclease [Bacillus anthracis str. A0174] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|320169388|gb|EFW46287.1| hypothetical protein CAOG_04255 [Capsaspora owczarzaki ATCC 30864] Length = 1193 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 L+I++ +F ++F+ T V G NG GKS++ A+ G T G SIK+ Sbjct: 156 LEIDLQNFMCHG-RFHMKFSPQFTFVTGVNGSGKSAILCALMVGLGGKTGSTGRGSSIKE 214 Query: 90 R 90 Sbjct: 215 L 215 >gi|301053881|ref|YP_003792092.1| exonuclease SbcC [Bacillus anthracis CI] gi|300376050|gb|ADK04954.1| exonuclease SbcC [Bacillus cereus biovar anthracis str. CI] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|294811387|ref|ZP_06770030.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] gi|326439882|ref|ZP_08214616.1| putative exonuclease [Streptomyces clavuligerus ATCC 27064] gi|294323986|gb|EFG05629.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] Length = 1339 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +L + ++ F F Q+I+F + +++G G GK+S+ +A+ + YG Sbjct: 1 MRLHRLTVTAFGPFGATQEIDFDALSGAGIFLLHGATGAGKTSVLDAVCFALYG 54 >gi|261854633|ref|YP_003261916.1| DNA replication and repair protein RecF [Halothiobacillus neapolitanus c2] gi|261835102|gb|ACX94869.1| DNA replication and repair protein RecF [Halothiobacillus neapolitanus c2] Length = 359 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 15/99 (15%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR----- 80 + L + I+ FR T + + ++ G NG GK+S+ EAI +L + R Sbjct: 3 LTHLTSLSITQFRNLT-MTDCPLSAGFNLLVGDNGAGKTSVLEAIYYLSTLKSFRTQTHN 61 Query: 81 --------RKHGDSIKKRSIKT-PMPMCMAVPRCKYQLK 110 R G ++ + + MA+ RCK Q + Sbjct: 62 DLIARYPDRDRGCAVVRAGVHQDDHDFFMALERCKDQFR 100 >gi|169825625|ref|YP_001695783.1| hypothetical protein Bsph_0007 [Lysinibacillus sphaericus C3-41] gi|226737813|sp|B1HS35|RECF_LYSSC RecName: Full=DNA replication and repair protein recF gi|168990113|gb|ACA37653.1| RecF [Lysinibacillus sphaericus C3-41] Length = 371 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++++R + + + F+ + + G+N GK+++ E+I L + R + Sbjct: 1 MHIEQIKLTNYRNY-DALALNFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRWDSD 66 >gi|218235540|ref|YP_002367043.1| putative exonuclease [Bacillus cereus B4264] gi|218163497|gb|ACK63489.1| putative exonuclease [Bacillus cereus B4264] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|196033910|ref|ZP_03101321.1| putative exonuclease [Bacillus cereus W] gi|195993590|gb|EDX57547.1| putative exonuclease [Bacillus cereus W] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|153870348|ref|ZP_01999768.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152073185|gb|EDN70231.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 145 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+L + + F+ + +EF ++L ++ G NG GKS+L Sbjct: 1 MKILRLSLRGFKTIKHQENLEFDENLNLLIGANGSGKSNLI 41 >gi|126651998|ref|ZP_01724190.1| recombination protein F [Bacillus sp. B14905] gi|126591267|gb|EAZ85376.1| recombination protein F [Bacillus sp. B14905] Length = 371 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+++++R + + + F+ + + G+N GK+++ E+I L + R + Sbjct: 1 MHIEQIKLTNYRNY-DALALNFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRWDSD 66 >gi|108757445|ref|YP_634329.1| hypothetical protein MXAN_6198 [Myxococcus xanthus DK 1622] gi|108461325|gb|ABF86510.1| hypothetical protein MXAN_6198 [Myxococcus xanthus DK 1622] Length = 471 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL +E+ H+R + F+ +V G+NG G+++L E I + R H Sbjct: 42 MKLTRLEVHHYRNVVPGTSLVFSPSYNLVLGENGTGRTTLLELISTVLGSDFSGRIH 98 >gi|92119263|ref|YP_578992.1| hypothetical protein Nham_3828 [Nitrobacter hamburgensis X14] gi|91802157|gb|ABE64532.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 604 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +EI +FRG E + F+ H T++ G N GK+++ EA+ LF Sbjct: 1 MQIAKLEIENFRGIREGV-VRFSPH-TVLVGSNNCGKTTVVEALALLFG 47 >gi|30262365|ref|NP_844742.1| exonuclease, putative [Bacillus anthracis str. Ames] gi|47527655|ref|YP_019004.1| exonuclease [Bacillus anthracis str. 'Ames Ancestor'] gi|49185208|ref|YP_028460.1| exonuclease [Bacillus anthracis str. Sterne] gi|165870529|ref|ZP_02215183.1| putative exonuclease [Bacillus anthracis str. A0488] gi|167633157|ref|ZP_02391483.1| putative exonuclease [Bacillus anthracis str. A0442] gi|170686905|ref|ZP_02878124.1| putative exonuclease [Bacillus anthracis str. A0465] gi|170706643|ref|ZP_02897102.1| putative exonuclease [Bacillus anthracis str. A0389] gi|190565127|ref|ZP_03018047.1| putative exonuclease [Bacillus anthracis Tsiankovskii-I] gi|227814829|ref|YP_002814838.1| putative exonuclease [Bacillus anthracis str. CDC 684] gi|229602050|ref|YP_002866698.1| putative exonuclease [Bacillus anthracis str. A0248] gi|254684939|ref|ZP_05148799.1| putative exonuclease [Bacillus anthracis str. CNEVA-9066] gi|254722345|ref|ZP_05184133.1| putative exonuclease [Bacillus anthracis str. A1055] gi|254743429|ref|ZP_05201114.1| putative exonuclease [Bacillus anthracis str. Kruger B] gi|254751701|ref|ZP_05203738.1| putative exonuclease [Bacillus anthracis str. Vollum] gi|254760220|ref|ZP_05212244.1| putative exonuclease [Bacillus anthracis str. Australia 94] gi|30256996|gb|AAP26228.1| putative exonuclease [Bacillus anthracis str. Ames] gi|47502803|gb|AAT31479.1| putative exonuclease [Bacillus anthracis str. 'Ames Ancestor'] gi|49179135|gb|AAT54511.1| exonuclease, putative [Bacillus anthracis str. Sterne] gi|164713684|gb|EDR19207.1| putative exonuclease [Bacillus anthracis str. A0488] gi|167531969|gb|EDR94634.1| putative exonuclease [Bacillus anthracis str. A0442] gi|170128374|gb|EDS97242.1| putative exonuclease [Bacillus anthracis str. A0389] gi|170668956|gb|EDT19700.1| putative exonuclease [Bacillus anthracis str. A0465] gi|190563154|gb|EDV17119.1| putative exonuclease [Bacillus anthracis Tsiankovskii-I] gi|227006962|gb|ACP16705.1| putative exonuclease [Bacillus anthracis str. CDC 684] gi|229266458|gb|ACQ48095.1| putative exonuclease [Bacillus anthracis str. A0248] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|295396106|ref|ZP_06806289.1| ATP-dependent endonuclease [Brevibacterium mcbrellneri ATCC 49030] gi|294971047|gb|EFG46939.1| ATP-dependent endonuclease [Brevibacterium mcbrellneri ATCC 49030] Length = 83 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRR 81 K+ +EI +FRG + I F D+ T++ G+N GKS++ EA++ + T RR Sbjct: 1 MKVRQLEIENFRGVRAGKVI-FVDN-TLLVGENNVGKSTVCEALDLVLGPERTSRR 54 >gi|169806692|ref|XP_001828090.1| DNA repair protein rad18 [Enterocytozoon bieneusi H348] gi|161779218|gb|EDQ31242.1| DNA repair protein rad18 [Enterocytozoon bieneusi H348] Length = 940 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + +I F++ +T + G NG GKS+ A+ +F ++ + G+S K Sbjct: 10 ISKIILINFMCHS-NTEINFSNRITCITGANGSGKSAFMIALGIVFGQSAKKLERGNSFK 68 Query: 89 KRSIKTPMPMCMAV 102 + + V Sbjct: 69 NLIKQNETSATIIV 82 >gi|91974485|ref|YP_567144.1| recombination protein F [Rhodopseudomonas palustris BisB5] gi|91680941|gb|ABE37243.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris BisB5] Length = 378 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + + + ++ G NG GK++ EAI +L G RR D + Sbjct: 5 RITRLTLTHFRNYRAAALHTRGERV-VLVGANGAGKTNCLEAISFLSPGRGLRRATLDDV 63 Query: 88 KKRSIK 93 Sbjct: 64 SDHQGD 69 >gi|258514668|ref|YP_003190890.1| SMC domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778373|gb|ACV62267.1| SMC domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 526 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I + +F+ +IE LTI+ G++ GKS++ A+ W+F Sbjct: 1 MFIKKISLENFQSHAS-TEIELPPGLTIIVGESDRGKSAIIRALRWVF 47 >gi|325847034|ref|ZP_08169860.1| exonuclease SbcCD, C subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481006|gb|EGC84051.1| exonuclease SbcCD, C subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 1020 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 K + +E+ F + I+F+ + I++G G GK+S+ +AI + +G QR Sbjct: 1 MKPISLEMYGFMTYKNKTFIDFSKLYDSKIFIISGDTGSGKTSIFDAISFALFGEIQREG 60 Query: 82 -----KHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 D + T + + KY++K Sbjct: 61 FIIDDLRSDFLNGDDQPTYVDFIFELEGKKYRVK 94 >gi|299532738|ref|ZP_07046126.1| SMC protein-like protein [Comamonas testosteroni S44] gi|298719373|gb|EFI60342.1| SMC protein-like protein [Comamonas testosteroni S44] Length = 1143 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 10/92 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + ++F + L + G G GKS+L +AI Y T R Sbjct: 1 MRILKLRLKNLNSLKGEWNVDFTVAPFADNGLFAITGPTGAGKSTLLDAICLALYHQTPR 60 Query: 81 ----RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 D + + + + + V Y+ Sbjct: 61 LDTISGSNDIMTRHTGECEAEVEFEVKGVAYR 92 >gi|188574573|ref|YP_001911502.1| RecF/RecN/SMC N terminal domain protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519025|gb|ACD56970.1| RecF/RecN/SMC N terminal domain protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 884 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY- 75 L S A+ I K++ + ++ G+ + +++F+DHL V G G GKS+L E + + Sbjct: 251 LNSQQAQGPIGKVVRMTVAG--GYLDGVRVDFSDHLNTVIGGRGTGKSTLLECLRFALDL 308 Query: 76 ---GYTQRRKHGDSIKK 89 G ++ H + K+ Sbjct: 309 PPKGKQAQKLHQEITKE 325 >gi|218903495|ref|YP_002451329.1| putative exonuclease [Bacillus cereus AH820] gi|218539253|gb|ACK91651.1| putative exonuclease [Bacillus cereus AH820] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|118477765|ref|YP_894916.1| exonuclease [Bacillus thuringiensis str. Al Hakam] gi|118416990|gb|ABK85409.1| exonuclease [Bacillus thuringiensis str. Al Hakam] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|58584095|ref|YP_203111.1| hypothetical protein XOO4472 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428689|gb|AAW77726.1| hypothetical protein XOO4472 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 884 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY- 75 L S A+ I K++ + ++ G+ + +++F+DHL V G G GKS+L E + + Sbjct: 251 LNSQQAQGPIGKVVRMTVAG--GYLDGVRVDFSDHLNTVIGGRGTGKSTLLECLRFALDL 308 Query: 76 ---GYTQRRKHGDSIKK 89 G ++ H + K+ Sbjct: 309 PPKGKQAQKLHQEITKE 325 >gi|49477636|ref|YP_036463.1| exonuclease SbcC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329192|gb|AAT59838.1| exonuclease SbcC [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|52143116|ref|YP_083713.1| exonuclease [Bacillus cereus E33L] gi|51976585|gb|AAU18135.1| exonuclease [Bacillus cereus E33L] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|307207997|gb|EFN85556.1| Structural maintenance of chromosomes protein 5 [Harpegnathos saltator] Length = 1044 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + I + +F + + I+ +L ++ G NG GKS++ AI G T Sbjct: 9 ITRIYLENFVTY-DKVTIKPGRYLNVIIGPNGSGKSTIVAAIVLGLGGKT 57 >gi|289621216|emb|CBI51999.1| putative RAD50 protein [Sordaria macrospora] Length = 1317 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 28 KLLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + I R F I F LT++ G NG GK+++ E +++ G G Sbjct: 3 KIEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSKG 61 >gi|255027332|ref|ZP_05299318.1| putative RecF/RecN/SMC N domain [Listeria monocytogenes FSL J2-003] Length = 339 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 F++ +I I + R T + + LTI++G NGYGK++ +AIE LF G Q Sbjct: 3 FRIENISICNLRSITSENPLFIDLNSSLLTILDGPNGYGKTTFFDAIELLFTGNIQ 58 >gi|255025987|ref|ZP_05297973.1| SbcC family exonuclease [Listeria monocytogenes FSL J2-003] Length = 934 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|225864325|ref|YP_002749703.1| putative exonuclease [Bacillus cereus 03BB102] gi|225789550|gb|ACO29767.1| putative exonuclease [Bacillus cereus 03BB102] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|77464922|ref|YP_354426.1| recombination protein F [Rhodobacter sphaeroides 2.4.1] gi|77389340|gb|ABA80525.1| RecF protein [Rhodobacter sphaeroides 2.4.1] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F G NG GK++L EAI L G RR D I Sbjct: 11 VTSLALSHFRSHRA-ARMGFDGRPVAFVGSNGAGKTNLLEAISLLSPGRGLRRAAADEIA 69 Query: 89 KR 90 +R Sbjct: 70 RR 71 >gi|327198689|emb|CCA61390.1| unnamed protein product [Diadromus pulchellus ascovirus 4a] Length = 630 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Query: 32 IEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 I +++F+ F +IE D T+V+ +G+GK+++ +AI + Sbjct: 3 ISMTNFKCFA-KARIELEDGTFTLVSAPSGFGKTTILDAIAFCL 45 >gi|312878755|ref|ZP_07738555.1| DNA replication and repair protein RecF [Aminomonas paucivorans DSM 12260] gi|310782046|gb|EFQ22444.1| DNA replication and repair protein RecF [Aminomonas paucivorans DSM 12260] Length = 352 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + D+E+ +R + + I ++ + ++ G NG GK++L EA++ L Sbjct: 1 MRFRDLEVHRYRNLEDRE-ITWSPGINVLLGPNGAGKTNLLEAMDLLAG 48 >gi|254168959|ref|ZP_04875798.1| hypothetical protein ABOONEI_887 [Aciduliprofundum boonei T469] gi|197622065|gb|EDY34641.1| hypothetical protein ABOONEI_887 [Aciduliprofundum boonei T469] Length = 802 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + + R + E Q+IE +T+ G G GK+++ +I++ +G + + ++ Sbjct: 3 IRRIHLRNIRSY-EDQEIELGKGITLFEGDIGSGKTTILMSIDFALFGNSTPDFYRSLLR 61 Query: 89 KRSIK 93 K + K Sbjct: 62 KGANK 66 >gi|196039848|ref|ZP_03107151.1| putative exonuclease [Bacillus cereus NVH0597-99] gi|196029107|gb|EDX67711.1| putative exonuclease [Bacillus cereus NVH0597-99] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|307608753|emb|CBW98135.1| RecF recombinational DNA repair ATPase [Legionella pneumophila 130b] Length = 353 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +FR I + + G NG GK+SL EA+ L ++ R Sbjct: 3 LSEVRIHNFRNIASTSLI-LNPNFNCITGPNGSGKTSLLEALYMLSCAHSFRS 54 >gi|148358142|ref|YP_001249349.1| DNA recombination/repair protein ATPase RecF [Legionella pneumophila str. Corby] gi|148279915|gb|ABQ54003.1| DNA recombination and repair protein ATPase RecF [Legionella pneumophila str. Corby] Length = 353 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +FR I + + G NG GK+SL EA+ L ++ R Sbjct: 3 LSEVRIHNFRNIASTSLI-LNPNFNCITGPNGSGKTSLLEALYMLSCAHSFRS 54 >gi|54295986|ref|YP_122355.1| RecF recombinational DNA repair ATPase [Legionella pneumophila str. Paris] gi|53749771|emb|CAH11151.1| RecF recombinational DNA repair ATPase [Legionella pneumophila str. Paris] Length = 353 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +FR I + + G NG GK+SL EA+ L ++ R Sbjct: 3 LSEVRIHNFRNIASTSLI-LNPNFNCITGPNGSGKTSLLEALYMLSCAHSFRS 54 >gi|54292967|ref|YP_125382.1| RecF recombinational DNA repair ATPase [Legionella pneumophila str. Lens] gi|53752799|emb|CAH14233.1| RecF recombinational DNA repair ATPase [Legionella pneumophila str. Lens] Length = 353 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +FR I + + G NG GK+SL EA+ L ++ R Sbjct: 3 LSEVRIHNFRNIASTSLI-LNPNFNCITGPNGSGKTSLLEALYMLSCAHSFRS 54 >gi|308161371|gb|EFO63822.1| RAD50 DNA repair protein, putative [Giardia lamblia P15] Length = 1382 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSS 65 ++ L + + + R + + I F+ +LTI+ G NG GKS+ Sbjct: 1 MYYLDQLTLKNVRSYRDEPSTIAFSPNLTIITGHNGAGKST 41 >gi|209883314|ref|YP_002287171.1| ATP-dependent endonuclease family protein [Oligotropha carboxidovorans OM5] gi|209871510|gb|ACI91306.1| ATP-dependent endonuclease family protein [Oligotropha carboxidovorans OM5] Length = 615 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I++FRG ++ ++F D T++ G N GKS++ EA++ + Sbjct: 1 MRVRRLKITNFRGISQG-SVDF-DGHTLLVGGNNIGKSTICEALDLVLG 47 >gi|150398584|ref|YP_001329051.1| recombination protein F [Sinorhizobium medicae WSM419] gi|150030099|gb|ABR62216.1| DNA replication and repair protein RecF [Sinorhizobium medicae WSM419] Length = 409 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++S FR + ++ ++ G+NG GK++L EAI +L G RR Sbjct: 40 VFLTRLKLSDFRNYA-TAALDLDQRHVVLTGENGAGKTNLMEAISFLSPGRGLRRAAYAD 98 Query: 87 IKKRS 91 + + Sbjct: 99 VVRVG 103 >gi|146297979|ref|YP_001192570.1| DNA replication and repair protein RecF [Flavobacterium johnsoniae UW101] gi|189039624|sp|A5FNH5|RECF_FLAJO RecName: Full=DNA replication and repair protein recF gi|146152397|gb|ABQ03251.1| DNA replication and repair protein RecF [Flavobacterium johnsoniae UW101] Length = 359 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F+E +F + G+NG GK+++ +AI L YG + Sbjct: 1 MHLNKLSLFNYKNFSE-AGFDFDIKINCFVGKNGIGKTNVLDAIYHLAYGKS 51 >gi|306826815|ref|ZP_07460116.1| possible prophage Lp2 protein 4 [Streptococcus pyogenes ATCC 10782] gi|304430978|gb|EFM33986.1| possible prophage Lp2 protein 4 [Streptococcus pyogenes ATCC 10782] Length = 573 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + I + +FRGF ++ + ++T ++G NG GKS++ A+ Sbjct: 1 MAISIKSINLQNFRGFEDLH-LNLNKYVTCISGHNGTGKSTILAAL 45 >gi|291531541|emb|CBK97126.1| hypothetical protein EUS_21080 [Eubacterium siraeum 70/3] Length = 420 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + +Q + L I+ G+N GK+S+ +AI W G + Sbjct: 3 VKISSLEIENVKRVKAVQLTPAENGLMIIGGKNNQGKTSVLDAIAWALGGDRLK 56 >gi|295689926|ref|YP_003593619.1| chromosome partition protein [Caulobacter segnis ATCC 21756] gi|295431829|gb|ADG11001.1| chromosome partition protein [Caulobacter segnis ATCC 21756] Length = 604 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++D+ I +FRG ++ F H T++ G N GK+++ EA+ LF Sbjct: 1 MHVVDLRIENFRGIRSG-RVRFGQH-TVLVGPNNSGKTTIIEALALLFG 47 >gi|258650275|ref|YP_003199431.1| DNA replication and repair protein RecF [Nakamurella multipartita DSM 44233] gi|258553500|gb|ACV76442.1| DNA replication and repair protein RecF [Nakamurella multipartita DSM 44233] Length = 380 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + + + ++ G+NG GK++L EA+ +L + R Sbjct: 1 MYVRHLALTDFRSWPA-VDVPLQPGVNVLVGRNGTGKTNLMEALGYLATLGSHRVATDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRSG 64 >gi|187939948|gb|ACD39084.1| hypothetical protein PACL_0296 [Pseudomonas aeruginosa] Length = 592 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 Y + ++ +I +++FR F Q I A +T++ G N GKSS+ A+ ++ Sbjct: 12 YQSIIAMRITEIALTNFRSFQVTQSIALAP-VTLLFGPNSVGKSSVLMALFYI 63 >gi|167749505|ref|ZP_02421632.1| hypothetical protein EUBSIR_00461 [Eubacterium siraeum DSM 15702] gi|167657533|gb|EDS01663.1| hypothetical protein EUBSIR_00461 [Eubacterium siraeum DSM 15702] Length = 420 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + +Q + L I+ G+N GK+S+ +AI W G + Sbjct: 3 VKISSLEIENVKRVKAVQLTPAENGLMIIGGKNNQGKTSVLDAIAWALGGDRLK 56 >gi|86147985|ref|ZP_01066288.1| predicted ATP-dependent endonuclease, OLD family protein [Vibrio sp. MED222] gi|85834209|gb|EAQ52364.1| predicted ATP-dependent endonuclease, OLD family protein [Vibrio sp. MED222] Length = 651 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ I + +FR F + + D + G NG GKS++ A+ Sbjct: 1 MKIESIRVKNFRSFKDETIL--LDDYSCFVGSNGAGKSTVMNAL 42 >gi|85710419|ref|ZP_01041483.1| recombinational DNA repair ATPase [Erythrobacter sp. NAP1] gi|85687597|gb|EAQ27602.1| recombinational DNA repair ATPase [Erythrobacter sp. NAP1] Length = 362 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + +FR + E A H ++ G+NG GK+++ EAI L G RR + Sbjct: 1 MALAKITLQNFRNHARSELAETA-HFNLLVGENGAGKTNVLEAISLLSPGRGLRRANLTD 59 Query: 87 IKKRSIKTPMPMCMAV 102 + +++ P A+ Sbjct: 60 LARKAPGDAQPGAFAI 75 >gi|323341753|ref|ZP_08081986.1| hypothetical protein HMPREF0357_10166 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464178|gb|EFY09371.1| hypothetical protein HMPREF0357_10166 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 684 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +IEI +++G T+ +I + + G N GK+++ EAI Sbjct: 3 IKEIEIENYKGITDKVRISIGRKIVPIVGMNESGKTTIIEAI 44 >gi|254854266|ref|ZP_05243614.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258607658|gb|EEW20266.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 279 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 7/79 (8%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++FK + + +F+ + +++ + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KIVFK--QLTLKNFKNHKNLV-VDY-EQVTQISGKNGFGKTSIGEAVTWLLYGT---DLL 54 Query: 84 GDSIKKRSIKTPMPMCMAV 102 G I+ + + T + +++ Sbjct: 55 GTKIEPQPLGTEEEVHVSL 73 >gi|217968007|ref|YP_002353513.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] gi|217337106|gb|ACK42899.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] Length = 978 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + KL+ +++S+F+ + + +IEF + ++ G+N GKS++ EAI + +G Sbjct: 1 MIKLVSLKLSNFKQY-QNARIEFPEQGKILIKGKNEAGKSTIFEAIAFALFGKPVYVGSK 59 Query: 85 DSIKKRSIK 93 ++ + + + Sbjct: 60 PNLIRFNAE 68 >gi|83950588|ref|ZP_00959321.1| recombination protein F [Roseovarius nubinhibens ISM] gi|83838487|gb|EAP77783.1| recombination protein F [Roseovarius nubinhibens ISM] Length = 369 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++++SHFR ++ ++G NG GK++L EA+ + G RR Sbjct: 4 LYLSELKLSHFRSHLGSA-LQLDPRPVAIHGDNGSGKTNLIEAVSLISPGRGLRRAAAQD 62 Query: 87 IKKR 90 + ++ Sbjct: 63 MGRQ 66 >gi|120552948|ref|YP_957299.1| DNA replication and repair protein RecF [Marinobacter aquaeolei VT8] gi|166220714|sp|A1TWJ3|RECF_MARAV RecName: Full=DNA replication and repair protein recF gi|120322797|gb|ABM17112.1| DNA replication and repair protein RecF [Marinobacter aquaeolei VT8] Length = 373 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ ++ HFR +EF+ ++ G NG GK+S+ EAI +L G + R + Sbjct: 1 MALVKLQTQHFRNLLS-APVEFSPSFNLLYGANGSGKTSVLEAIGYLGLGRSFRVSRHQA 59 Query: 87 IKKRSI 92 + Sbjct: 60 VVAHGQ 65 >gi|323128305|gb|ADX25602.1| recombination protein F [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|237737023|ref|ZP_04567504.1| predicted protein [Fusobacterium mortiferum ATCC 9817] gi|229420885|gb|EEO35932.1| predicted protein [Fusobacterium mortiferum ATCC 9817] Length = 1016 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L +EI + + E Q I F + L + G+ G GKS++ +A+ + YG R Sbjct: 1 MRPLLLEIEGLQSYKEKQVINFEKLCENGLFGIFGETGSGKSTILDAMIFSLYGKIPRTA 60 Query: 83 HGD 85 D Sbjct: 61 ELD 63 >gi|206973664|ref|ZP_03234582.1| putative exonuclease [Bacillus cereus H3081.97] gi|206747820|gb|EDZ59209.1| putative exonuclease [Bacillus cereus H3081.97] Length = 1029 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|139474624|ref|YP_001129340.1| recombination protein F [Streptococcus pyogenes str. Manfredo] gi|166221873|sp|A2RH21|RECF_STRPG RecName: Full=DNA replication and repair protein recF gi|134272871|emb|CAM31153.1| DNA replication and repair protein RecF [Streptococcus pyogenes str. Manfredo] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|94995364|ref|YP_603462.1| recombination protein F [Streptococcus pyogenes MGAS10750] gi|166221872|sp|Q1J443|RECF_STRPF RecName: Full=DNA replication and repair protein recF gi|94548872|gb|ABF38918.1| DNA replication and repair protein recF [Streptococcus pyogenes MGAS10750] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|94989496|ref|YP_597597.1| recombination protein F [Streptococcus pyogenes MGAS9429] gi|166221870|sp|Q1JJC0|RECF_STRPC RecName: Full=DNA replication and repair protein recF gi|94543004|gb|ABF33053.1| DNA replication and repair protein [Streptococcus pyogenes MGAS9429] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|71904550|ref|YP_281353.1| recombination protein F [Streptococcus pyogenes MGAS6180] gi|94993383|ref|YP_601482.1| recombination protein F [Streptococcus pyogenes MGAS2096] gi|97180999|sp|Q48QL2|RECF_STRPM RecName: Full=DNA replication and repair protein recF gi|166221869|sp|Q1J973|RECF_STRPB RecName: Full=DNA replication and repair protein recF gi|71803645|gb|AAX72998.1| DNA replication and repair protein recF [Streptococcus pyogenes MGAS6180] gi|94546891|gb|ABF36938.1| DNA replication and repair protein recF [Streptococcus pyogenes MGAS2096] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|50915219|ref|YP_061191.1| recombination protein F [Streptococcus pyogenes MGAS10394] gi|73914003|sp|Q5X9A5|RECF_STRP6 RecName: Full=DNA replication and repair protein recF gi|533080|gb|AAA85783.1| RecF protein [Streptococcus pyogenes] gi|50904293|gb|AAT88008.1| RecF [Streptococcus pyogenes MGAS10394] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|15675937|ref|NP_270111.1| recombination protein F [Streptococcus pyogenes M1 GAS] gi|71911668|ref|YP_283218.1| recombination protein F [Streptococcus pyogenes MGAS5005] gi|81171138|sp|P0C0D1|RECF_STRP1 RecName: Full=DNA replication and repair protein recF gi|13623177|gb|AAK34832.1| RecF protein [Streptococcus pyogenes M1 GAS] gi|71854450|gb|AAZ52473.1| DNA replication and repair protein [Streptococcus pyogenes MGAS5005] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|19747036|ref|NP_608172.1| recombination protein F [Streptococcus pyogenes MGAS8232] gi|94991484|ref|YP_599584.1| recombination protein F [Streptococcus pyogenes MGAS10270] gi|306826422|ref|ZP_07459735.1| recombination protein F [Streptococcus pyogenes ATCC 10782] gi|25453247|sp|Q8NYZ4|RECF_STRP8 RecName: Full=DNA replication and repair protein recF gi|166221871|sp|Q1JEB8|RECF_STRPD RecName: Full=DNA replication and repair protein recF gi|19749296|gb|AAL98671.1| recF protein [Streptococcus pyogenes MGAS8232] gi|94544992|gb|ABF35040.1| DNA replication and repair protein recF [Streptococcus pyogenes MGAS10270] gi|304431386|gb|EFM34382.1| recombination protein F [Streptococcus pyogenes ATCC 10782] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|56808225|ref|ZP_00365998.1| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Streptococcus pyogenes M49 591] gi|209560278|ref|YP_002286750.1| recombination protein F [Streptococcus pyogenes NZ131] gi|226737844|sp|B5XJC1|RECF_STRPZ RecName: Full=DNA replication and repair protein recF gi|209541479|gb|ACI62055.1| Recombination protein F [Streptococcus pyogenes NZ131] Length = 368 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKHYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|324326377|gb|ADY21637.1| putative exonuclease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1029 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|313902985|ref|ZP_07836380.1| hypothetical protein ThesuDRAFT_0668 [Thermaerobacter subterraneus DSM 13965] gi|313466709|gb|EFR62228.1| hypothetical protein ThesuDRAFT_0668 [Thermaerobacter subterraneus DSM 13965] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFT---EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L + + FRG K++F + +T + G NG GKSSL +AI + G R Sbjct: 4 YYLAGLTVEGFRGINNNGSPLKMKFDPNKITSIFGGNGLGKSSLFDAITYAITGNVPR 61 >gi|222095947|ref|YP_002530004.1| exonuclease [Bacillus cereus Q1] gi|221240005|gb|ACM12715.1| exonuclease [Bacillus cereus Q1] Length = 1029 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|196043381|ref|ZP_03110619.1| putative exonuclease [Bacillus cereus 03BB108] gi|196025690|gb|EDX64359.1| putative exonuclease [Bacillus cereus 03BB108] Length = 1029 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|332139522|ref|YP_004425260.1| DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549544|gb|AEA96262.1| DNA repair ATPase [Alteromonas macleodii str. 'Deep ecotype'] Length = 704 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 27 FKLLDIEISHFRGFT---EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + +F+ + + F + L ++ G NG GKS + + W+ Y Sbjct: 1 MLIKSLSLKNFQCYCGELDQNHFCFKNGLNLIIGNNGNGKSKVFDGFYWVLYDQI 55 >gi|117926499|ref|YP_867116.1| SMC domain-containing protein [Magnetococcus sp. MC-1] gi|117610255|gb|ABK45710.1| SMC domain protein [Magnetococcus sp. MC-1] Length = 394 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ IE+ ++R F +I KI+ +T++ G NG GKS+ + + ++ Sbjct: 1 MRIESIEVKNYRVFEDI-KIDRLSRVTVLVGANGSGKSTFFDILSFI 46 >gi|315650189|ref|ZP_07903264.1| recombination protein F [Eubacterium saburreum DSM 3986] gi|315487546|gb|EFU77854.1| recombination protein F [Eubacterium saburreum DSM 3986] Length = 363 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ +R + E I+ + + I G N GK+++ E+I + R I Sbjct: 3 IESLELKDYRNY-ENLNIKLSTGVNIFYGDNAQGKTNILESIYLATTSKSHRGSKDKDII 61 Query: 89 KRS 91 + Sbjct: 62 RFG 64 >gi|297616713|ref|YP_003701872.1| SMC domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144550|gb|ADI01307.1| SMC domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 1020 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I ++ F + Q ++F + L +V+G G GK+++ +AI + YG T Sbjct: 1 MKPIKIIVTAFGPYAGTQVVDFNELGGHSLFLVHGPTGAGKTTVLDAICFALYGETTSTG 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 RDGKNMRS 68 >gi|292492035|ref|YP_003527474.1| SMC domain protein [Nitrosococcus halophilus Nc4] gi|291580630|gb|ADE15087.1| SMC domain protein [Nitrosococcus halophilus Nc4] Length = 1219 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F A+ L + G G GKSSL +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTVPEFAANGLFAITGPTGAGKSSLLDAICLALYHQTPR 60 >gi|238793802|ref|ZP_04637423.1| hypothetical protein yinte0001_7040 [Yersinia intermedia ATCC 29909] gi|238726866|gb|EEQ18399.1| hypothetical protein yinte0001_7040 [Yersinia intermedia ATCC 29909] Length = 393 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I+I G + I+F +++ I+ G NG GK+++ +++ ++ + + Sbjct: 1 MKIQKIDIKDIGGI-KRAIIDFDEYMNIICGPNGIGKTTILDSVA-----HSFISTNSNV 54 Query: 87 IKKRSIKTPMPMCMAVPRC 105 +K+ + T + + + C Sbjct: 55 LKRHAQSTNGQINIVLNDC 73 >gi|257789805|ref|YP_003180411.1| hypothetical protein Elen_0028 [Eggerthella lenta DSM 2243] gi|317489264|ref|ZP_07947781.1| ribose import ATP-binding protein rbsA 1 [Eggerthella sp. 1_3_56FAA] gi|325832266|ref|ZP_08165265.1| conserved domain protein [Eggerthella sp. HGA1] gi|257473702|gb|ACV54022.1| conserved hypothetical protein [Eggerthella lenta DSM 2243] gi|316911665|gb|EFV33257.1| ribose import ATP-binding protein rbsA 1 [Eggerthella sp. 1_3_56FAA] gi|325486102|gb|EGC88556.1| conserved domain protein [Eggerthella sp. HGA1] Length = 768 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I+I F F+ FA HL +V G N GK++L+ + + +G+ + R ++ Sbjct: 5 YLEHIKIVSFGAFSNKAVGPFAPHLNVVYGPNEAGKTTLASFVGGVLFGWEEARGSRNTY 64 Query: 88 K 88 K Sbjct: 65 K 65 >gi|222087292|ref|YP_002545829.1| chromosome partition protein [Agrobacterium radiobacter K84] gi|221724740|gb|ACM27896.1| chromosome partition protein [Agrobacterium radiobacter K84] Length = 604 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +EI +FRG E + FA H T++ G N GK+++ EA+ LF Sbjct: 1 MQIAKLEIENFRGIREGV-VRFAPH-TVLVGSNNCGKTTVVEALALLFG 47 >gi|42781454|ref|NP_978701.1| exonuclease, putative [Bacillus cereus ATCC 10987] gi|42737376|gb|AAS41309.1| exonuclease, putative [Bacillus cereus ATCC 10987] Length = 1029 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|308184170|ref|YP_003928303.1| hypothetical protein HPSJM_01950 [Helicobacter pylori SJM180] gi|308060090|gb|ADO01986.1| hypothetical protein HPSJM_01950 [Helicobacter pylori SJM180] Length = 370 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + KI+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKNF-KNTKIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|294787716|ref|ZP_06752960.1| nuclease sbcCD, subunit C [Simonsiella muelleri ATCC 29453] gi|294484009|gb|EFG31692.1| nuclease sbcCD, subunit C [Simonsiella muelleri ATCC 29453] Length = 1217 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++ ++ + KI+F D + + G G GK++L +AI YG T R Sbjct: 1 MRIISLQFKNLNSLIGEWKIDFNAPEFRDDGIFAITGATGSGKTTLLDAICVALYGCTPR 60 >gi|251778334|ref|ZP_04821254.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082649|gb|EES48539.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 573 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + I +FR + K +F D T++ G+N GK+++ A+ + + + D Sbjct: 1 MKIKSVTIHNFRSIKDG-KFDFKD-YTLLTGKNNVGKTNVMSALRIFYDNELKYSEKNDF 58 Query: 87 IKKRSIKTP 95 K ++ Sbjct: 59 PKFKTYDNE 67 >gi|240281129|gb|EER44632.1| cohesin complex subunit [Ajellomyces capsulatus H143] Length = 1166 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 13/78 (16%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSL-----------SEAIEWLFY 75 KL+ +E+ +F+ + + F D + G NG GKS+ +AI ++ Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFASIIGPNGSGKSNSSVLPFPNTRYRMDAISFVL- 61 Query: 76 GYTQRRKHGDSIKKRSIK 93 G ++ + Sbjct: 62 GIKSSHLRSTHLRDLVYR 79 >gi|171185896|ref|YP_001794815.1| SMC domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935108|gb|ACB40369.1| SMC domain protein [Thermoproteus neutrophilus V24Sta] Length = 795 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++++ IE+ +FR + ++ D + G+ G GK+S+ AIE+ +G Sbjct: 1 MWRIERIELENFRSYKGRHELRIGDA-AVFWGRIGAGKTSILYAIEYALFG 50 >gi|27227578|emb|CAD59406.1| SMC4 protein [Anopheles gambiae] Length = 1376 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 72 IERITNYNFKSYAGHVMLGPFHQRFSSIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 130 >gi|91793857|ref|YP_563508.1| SMC protein-like protein [Shewanella denitrificans OS217] gi|91715859|gb|ABE55785.1| SMC protein-like protein [Shewanella denitrificans OS217] Length = 1265 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK+++ +AI Y T R Sbjct: 1 MKILSLRFKNINSLKDEWKIDFTLSPFKENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 >gi|262066870|ref|ZP_06026482.1| RECF protein [Fusobacterium periodonticum ATCC 33693] gi|291379421|gb|EFE86939.1| RECF protein [Fusobacterium periodonticum ATCC 33693] Length = 369 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +I +FR E +E ++ + + G+N GK+SL EAI + G + + K Sbjct: 1 MKISNISYLNFRNL-ENTSVELSEKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTTE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 MIKYNFD 66 >gi|238923553|ref|YP_002937069.1| hypothetical protein EUBREC_1173 [Eubacterium rectale ATCC 33656] gi|238875228|gb|ACR74935.1| Hypothetical protein EUBREC_1173 [Eubacterium rectale ATCC 33656] Length = 802 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ I++F +++ I F D + ++N NG+GKS+L+ ++ + YG+ +++ G Sbjct: 1 MKLIACHINNFGKLSDLN-INFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAF 59 Query: 87 IKKRSIKTP 95 ++R + P Sbjct: 60 ERERKLYKP 68 >gi|160879395|ref|YP_001558363.1| SMC domain-containing protein [Clostridium phytofermentans ISDg] gi|160428061|gb|ABX41624.1| SMC domain protein [Clostridium phytofermentans ISDg] Length = 1038 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRR 81 K L++ IS F F + F L +++G G GK+++ +AI + +G + Sbjct: 1 MKPLELAISGFGPFKGEVNVPFEKIGESGLFLISGDTGAGKTTIFDAIAFALFGCASGEN 60 Query: 82 KHGDSIK 88 + DS++ Sbjct: 61 RTTDSMR 67 >gi|332523373|ref|ZP_08399625.1| DNA replication and repair protein RecF [Streptococcus porcinus str. Jelinkova 176] gi|332314637|gb|EGJ27622.1| DNA replication and repair protein RecF [Streptococcus porcinus str. Jelinkova 176] Length = 363 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + ++R + E + +F L + G N GK++ EAI ++ + R + Sbjct: 1 MWLKELTLINYRNY-EQIQTKFVPGLNVFIGNNAQGKTNFLEAIYFIALTRSHRTRTDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|296167141|ref|ZP_06849548.1| recombination protein F [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897463|gb|EFG77062.1| recombination protein F [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 385 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELEPGRTVFVGSNGFGKTNLVEALWFSATLGSHRVGSDTP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|289525119|emb|CBJ14590.1| DNA replication and repair protein [Chlamydia trachomatis Sweden2] gi|296434663|gb|ADH16841.1| recombination protein F [Chlamydia trachomatis E/150] Length = 365 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 ++L + + FR +T++ ++E + + G N GK++L EA+ L G + R D Sbjct: 1 MRVLSLFLKDFRNYTDL-RLELGPDMNSIFGLNAQGKTNLLEALYILSLGRSFRTSRLTD 59 Query: 86 SIKK 89 +I+ Sbjct: 60 AIRF 63 >gi|217959858|ref|YP_002338414.1| putative exonuclease [Bacillus cereus AH187] gi|217066422|gb|ACJ80672.1| putative exonuclease [Bacillus cereus AH187] Length = 1029 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGD-SIKKRS-----IKTPMPMCMAVPRCKYQLK 110 D S+ + + T + + + +Y++K Sbjct: 61 RSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIK 94 >gi|162447300|ref|YP_001620432.1| hypothetical protein ACL_0435 [Acholeplasma laidlawii PG-8A] gi|161985407|gb|ABX81056.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A] Length = 1088 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 4/50 (8%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL I++ ++ FT+ KI D T+++G+NG GKS+L +A+++L G Sbjct: 3 KLTKIKLINWHLFTDQTIKI---DGNTLISGENGAGKSTLLDALQYLLVG 49 >gi|163787893|ref|ZP_02182339.1| DNA replication and repair protein RecF, ABC family ATPase [Flavobacteriales bacterium ALC-1] gi|159876213|gb|EDP70271.1| DNA replication and repair protein RecF, ABC family ATPase [Flavobacteriales bacterium ALC-1] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E Q +F + G NG GK++ +AI L +G + Sbjct: 1 MNLNTLSLVNYKNF-ESQVFDFDAKINCFVGANGVGKTNALDAIYHLAFGKS 51 >gi|329576321|gb|EGG57836.1| DNA replication and repair protein RecF [Enterococcus faecalis TX1467] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|315174179|gb|EFU18196.1| recombination protein F [Enterococcus faecalis TX1346] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|307276496|ref|ZP_07557616.1| recombination protein F [Enterococcus faecalis TX2134] gi|307287178|ref|ZP_07567249.1| recombination protein F [Enterococcus faecalis TX0109] gi|306501776|gb|EFM71067.1| recombination protein F [Enterococcus faecalis TX0109] gi|306506823|gb|EFM75973.1| recombination protein F [Enterococcus faecalis TX2134] gi|315165724|gb|EFU09741.1| recombination protein F [Enterococcus faecalis TX1302] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|256957012|ref|ZP_05561183.1| RecF protein [Enterococcus faecalis DS5] gi|256947508|gb|EEU64140.1| RecF protein [Enterococcus faecalis DS5] gi|315036376|gb|EFT48308.1| recombination protein F [Enterococcus faecalis TX0027] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|164687182|ref|ZP_02211210.1| hypothetical protein CLOBAR_00823 [Clostridium bartlettii DSM 16795] gi|164603606|gb|EDQ97071.1| hypothetical protein CLOBAR_00823 [Clostridium bartlettii DSM 16795] Length = 1176 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +EIS + E Q ++F++ L + G+ G GKS++ +AI YG R Sbjct: 1 MRPIRLEISGLNSYIEKQVVDFSELTSRGLFGIFGKTGSGKSTILDAITIAMYGNISR 58 >gi|15645693|ref|NP_207870.1| hypothetical protein HP1079 [Helicobacter pylori 26695] gi|2314229|gb|AAD08125.1| predicted coding region HP1079 [Helicobacter pylori 26695] Length = 370 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + KI+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKNF-KNTKIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|29374665|ref|NP_813817.1| recombination protein F [Enterococcus faecalis V583] gi|227518105|ref|ZP_03948154.1| recombination protein F [Enterococcus faecalis TX0104] gi|227555688|ref|ZP_03985735.1| recombination protein F [Enterococcus faecalis HH22] gi|229547126|ref|ZP_04435851.1| recombination protein F [Enterococcus faecalis TX1322] gi|229550696|ref|ZP_04439421.1| recombination protein F [Enterococcus faecalis ATCC 29200] gi|255971552|ref|ZP_05422138.1| DNA replication and repair protein recF [Enterococcus faecalis T1] gi|255974525|ref|ZP_05425111.1| DNA replication and repair protein recF [Enterococcus faecalis T2] gi|256618524|ref|ZP_05475370.1| RecF protein [Enterococcus faecalis ATCC 4200] gi|256761857|ref|ZP_05502437.1| DNA replication and repair protein recF [Enterococcus faecalis T3] gi|256854984|ref|ZP_05560345.1| recombination protein F [Enterococcus faecalis T8] gi|256960821|ref|ZP_05564992.1| RecF protein [Enterococcus faecalis Merz96] gi|256963986|ref|ZP_05568157.1| RecF protein [Enterococcus faecalis HIP11704] gi|257078689|ref|ZP_05573050.1| RecF protein [Enterococcus faecalis JH1] gi|257081350|ref|ZP_05575711.1| recombination protein F [Enterococcus faecalis E1Sol] gi|257084007|ref|ZP_05578368.1| recombination protein F [Enterococcus faecalis Fly1] gi|257087837|ref|ZP_05582198.1| RecF protein [Enterococcus faecalis D6] gi|257088489|ref|ZP_05582850.1| recombination protein recF [Enterococcus faecalis CH188] gi|257418839|ref|ZP_05595833.1| recombination protein F recF [Enterococcus faecalis T11] gi|257421346|ref|ZP_05598336.1| recombination protein F [Enterococcus faecalis X98] gi|293382659|ref|ZP_06628587.1| DNA replication and repair protein RecF [Enterococcus faecalis R712] gi|293387929|ref|ZP_06632465.1| DNA replication and repair protein RecF [Enterococcus faecalis S613] gi|294781252|ref|ZP_06746599.1| DNA replication and repair protein RecF [Enterococcus faecalis PC1.1] gi|300861825|ref|ZP_07107905.1| DNA replication and repair protein RecF [Enterococcus faecalis TUSoD Ef11] gi|307268920|ref|ZP_07550284.1| recombination protein F [Enterococcus faecalis TX4248] gi|307274015|ref|ZP_07555225.1| recombination protein F [Enterococcus faecalis TX0855] gi|307284062|ref|ZP_07564232.1| recombination protein F [Enterococcus faecalis TX0860] gi|307296593|ref|ZP_07576413.1| recombination protein F [Enterococcus faecalis TX0411] gi|312901293|ref|ZP_07760576.1| recombination protein F [Enterococcus faecalis TX0470] gi|312903110|ref|ZP_07762291.1| recombination protein F [Enterococcus faecalis TX0635] gi|312908811|ref|ZP_07767750.1| recombination protein F [Enterococcus faecalis DAPTO 512] gi|312951717|ref|ZP_07770611.1| recombination protein F [Enterococcus faecalis TX0102] gi|312979547|ref|ZP_07791229.1| recombination protein F [Enterococcus faecalis DAPTO 516] gi|51316408|sp|Q839Z2|RECF_ENTFA RecName: Full=DNA replication and repair protein recF gi|29342123|gb|AAO79889.1| DNA replication and repair protein RecF [Enterococcus faecalis V583] gi|227074439|gb|EEI12402.1| recombination protein F [Enterococcus faecalis TX0104] gi|227175198|gb|EEI56170.1| recombination protein F [Enterococcus faecalis HH22] gi|229304129|gb|EEN70125.1| recombination protein F [Enterococcus faecalis ATCC 29200] gi|229307708|gb|EEN73695.1| recombination protein F [Enterococcus faecalis TX1322] gi|255962570|gb|EET95046.1| DNA replication and repair protein recF [Enterococcus faecalis T1] gi|255967397|gb|EET98019.1| DNA replication and repair protein recF [Enterococcus faecalis T2] gi|256598051|gb|EEU17227.1| RecF protein [Enterococcus faecalis ATCC 4200] gi|256683108|gb|EEU22803.1| DNA replication and repair protein recF [Enterococcus faecalis T3] gi|256709497|gb|EEU24544.1| recombination protein F [Enterococcus faecalis T8] gi|256951317|gb|EEU67949.1| RecF protein [Enterococcus faecalis Merz96] gi|256954482|gb|EEU71114.1| RecF protein [Enterococcus faecalis HIP11704] gi|256986719|gb|EEU74021.1| RecF protein [Enterococcus faecalis JH1] gi|256989380|gb|EEU76682.1| recombination protein F [Enterococcus faecalis E1Sol] gi|256992037|gb|EEU79339.1| recombination protein F [Enterococcus faecalis Fly1] gi|256995867|gb|EEU83169.1| RecF protein [Enterococcus faecalis D6] gi|256997301|gb|EEU83821.1| recombination protein recF [Enterococcus faecalis CH188] gi|257160667|gb|EEU90627.1| recombination protein F recF [Enterococcus faecalis T11] gi|257163170|gb|EEU93130.1| recombination protein F [Enterococcus faecalis X98] gi|291079965|gb|EFE17329.1| DNA replication and repair protein RecF [Enterococcus faecalis R712] gi|291082666|gb|EFE19629.1| DNA replication and repair protein RecF [Enterococcus faecalis S613] gi|294451715|gb|EFG20170.1| DNA replication and repair protein RecF [Enterococcus faecalis PC1.1] gi|295112343|emb|CBL30980.1| DNA replication and repair protein RecF [Enterococcus sp. 7L76] gi|300848350|gb|EFK76107.1| DNA replication and repair protein RecF [Enterococcus faecalis TUSoD Ef11] gi|306495929|gb|EFM65517.1| recombination protein F [Enterococcus faecalis TX0411] gi|306503433|gb|EFM72682.1| recombination protein F [Enterococcus faecalis TX0860] gi|306509323|gb|EFM78383.1| recombination protein F [Enterococcus faecalis TX0855] gi|306514728|gb|EFM83279.1| recombination protein F [Enterococcus faecalis TX4248] gi|310625249|gb|EFQ08532.1| recombination protein F [Enterococcus faecalis DAPTO 512] gi|310630290|gb|EFQ13573.1| recombination protein F [Enterococcus faecalis TX0102] gi|310633501|gb|EFQ16784.1| recombination protein F [Enterococcus faecalis TX0635] gi|311287729|gb|EFQ66285.1| recombination protein F [Enterococcus faecalis DAPTO 516] gi|311291670|gb|EFQ70226.1| recombination protein F [Enterococcus faecalis TX0470] gi|315026674|gb|EFT38606.1| recombination protein F [Enterococcus faecalis TX2137] gi|315030119|gb|EFT42051.1| recombination protein F [Enterococcus faecalis TX4000] gi|315033553|gb|EFT45485.1| recombination protein F [Enterococcus faecalis TX0017] gi|315143592|gb|EFT87608.1| recombination protein F [Enterococcus faecalis TX2141] gi|315148270|gb|EFT92286.1| recombination protein F [Enterococcus faecalis TX4244] gi|315151294|gb|EFT95310.1| recombination protein F [Enterococcus faecalis TX0012] gi|315153720|gb|EFT97736.1| recombination protein F [Enterococcus faecalis TX0031] gi|315155120|gb|EFT99136.1| recombination protein F [Enterococcus faecalis TX0043] gi|315158750|gb|EFU02767.1| recombination protein F [Enterococcus faecalis TX0312] gi|315163334|gb|EFU07351.1| recombination protein F [Enterococcus faecalis TX0645] gi|315168223|gb|EFU12240.1| recombination protein F [Enterococcus faecalis TX1341] gi|315573988|gb|EFU86179.1| recombination protein F [Enterococcus faecalis TX0309B] gi|315578842|gb|EFU91033.1| recombination protein F [Enterococcus faecalis TX0630] gi|315581939|gb|EFU94130.1| recombination protein F [Enterococcus faecalis TX0309A] gi|323479243|gb|ADX78682.1| DNA replication and repair protein recF [Enterococcus faecalis 62] gi|327533857|gb|AEA92691.1| recombination protein F [Enterococcus faecalis OG1RF] Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|83855144|ref|ZP_00948674.1| recombination protein F [Sulfitobacter sp. NAS-14.1] gi|83842987|gb|EAP82154.1| recombination protein F [Sulfitobacter sp. NAS-14.1] Length = 365 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +SHFR + I + G NG GK+++ EA+ L G RR Sbjct: 4 LYLSQLTLSHFRSH-KRAVIHCDARPVSIFGPNGAGKTNILEAVSLLSPGRGLRRSSASD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MTRR 66 >gi|258676974|ref|YP_697474.2| hypothetical protein CPR_0137 [Clostridium perfringens SM101] gi|255926555|gb|ABG87633.2| hypothetical protein CPR_0137 [Clostridium perfringens SM101] Length = 666 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + I +++ F + IE ++ + GQN GKS++ +AI+ +F+ ++ + ++ Sbjct: 1 MKLSKLRIKNYKSFKDSGTIEIKGNIFALIGQNNAGKSAIMDAIQ-VFFPNCKKSANSEN 59 Query: 87 IKKRSIK 93 K + + Sbjct: 60 FHKFTKE 66 >gi|288941259|ref|YP_003443499.1| hypothetical protein Alvin_1534 [Allochromatium vinosum DSM 180] gi|288896631|gb|ADC62467.1| hypothetical protein Alvin_1534 [Allochromatium vinosum DSM 180] Length = 659 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL+ + + H+R E Q+I F LT++ G N GKS+L EA + +R + Sbjct: 1 MKLVSLRVRHYRLHRE-QQIAFDPSLTLIGGANETGKSTLVEAAHRALFLNHRRTGQDLA 59 Query: 87 IKKRSIKTPMP 97 + P Sbjct: 60 AMRSRQSGEAP 70 >gi|160888201|ref|ZP_02069204.1| hypothetical protein BACUNI_00609 [Bacteroides uniformis ATCC 8492] gi|156862336|gb|EDO55767.1| hypothetical protein BACUNI_00609 [Bacteroides uniformis ATCC 8492] Length = 691 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + + ++R F E F + + G+N GK++L AI + + Sbjct: 1 MYISKVSLVNYRNF-ENAFFLFNKGINTIIGENASGKTNLFRAIRLILDDSLLSSAYK 57 >gi|194363781|ref|YP_002026391.1| recombination protein F [Stenotrophomonas maltophilia R551-3] gi|226737839|sp|B4SR07|RECF_STRM5 RecName: Full=DNA replication and repair protein recF gi|194346585|gb|ACF49708.1| DNA replication and repair protein RecF [Stenotrophomonas maltophilia R551-3] Length = 364 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + R F ++ L ++ G NG GK+S+ EA+ + YG + R + D Sbjct: 1 MQIRRLALHQLRRFNAVELSP-QPGLNLLTGDNGAGKTSILEALHLMAYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LVRQGQE 66 >gi|150390274|ref|YP_001320323.1| DNA repair protein RecN [Alkaliphilus metalliredigens QYMF] gi|149950136|gb|ABR48664.1| DNA repair protein RecN [Alkaliphilus metalliredigens QYMF] Length = 569 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++E+S+F + I+F + L I+ G+ G GKS + +A+ + R Sbjct: 2 LLELEVSNF-ALIDQLHIQFENGLNILTGETGAGKSIIIDAVNMVIGARADRELVRTGAN 60 Query: 89 KRSIK 93 K +I+ Sbjct: 61 KCTIQ 65 >gi|239817025|ref|YP_002945935.1| hypothetical protein Vapar_4055 [Variovorax paradoxus S110] gi|239803602|gb|ACS20669.1| hypothetical protein Vapar_4055 [Variovorax paradoxus S110] Length = 494 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L +I++FR + I+ +T + G+N GKS+L A+ Sbjct: 1 MRLASFQITNFRSINDSGSID-TSQITAILGRNDSGKSNLLRAL 43 >gi|254521265|ref|ZP_05133320.1| DNA replication, recombinaison and repair protein [Stenotrophomonas sp. SKA14] gi|219718856|gb|EED37381.1| DNA replication, recombinaison and repair protein [Stenotrophomonas sp. SKA14] Length = 364 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + R F+ + L ++ G NG GK+S+ EA+ + YG + R + D Sbjct: 1 MQIRRLALHQLRRFSAADLLP-QPGLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LVRQGQE 66 >gi|168335059|ref|ZP_02693170.1| ATPase involved in DNA repair [Epulopiscium sp. 'N.t. morphotype B'] Length = 1019 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S F F E +I+F ++ +++G G GK+ + +AI + YG Sbjct: 1 MRPIKLVMSAFGPFREQVEIDFNGLKNKNIFMISGPTGAGKTVIFDAISFALYGEGSGNN 60 Query: 83 HGD 85 + Sbjct: 61 RKN 63 >gi|21911391|ref|NP_665659.1| recombination protein F [Streptococcus pyogenes MGAS315] gi|28896763|ref|NP_803113.1| recombination protein F [Streptococcus pyogenes SSI-1] gi|25453245|sp|Q8K5G2|RECF_STRP3 RecName: Full=DNA replication and repair protein recF gi|21905607|gb|AAM80462.1| RecF protein [Streptococcus pyogenes MGAS315] gi|28812017|dbj|BAC64946.1| RecF protein [Streptococcus pyogenes SSI-1] Length = 368 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ H+R + + F+ L + G N GK++ EAI +L +QR + Sbjct: 1 MWIKELELKHYRNY-DQLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSQRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|220931482|ref|YP_002508390.1| hypothetical protein Hore_06380 [Halothermothrix orenii H 168] gi|219992792|gb|ACL69395.1| hypothetical protein Hore_06380 [Halothermothrix orenii H 168] Length = 968 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 36/72 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + I F F E + + A + ++ G N GK++ I +L++G+ ++ + Sbjct: 1 MRIKSLYIKDFGIFREQKLEKIAPGMVVIGGPNRAGKTTFLNIIRYLWFGFPSKKTLPPA 60 Query: 87 IKKRSIKTPMPM 98 ++K ++ + + Sbjct: 61 LRKYEVEADIAL 72 >gi|327394786|dbj|BAK12208.1| hypothetical protein PAJ_2128 [Pantoea ananatis AJ13355] Length = 884 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L S I K+L + I+ G+ + +++F+DHL V G G GKS+L E + + Sbjct: 251 LNSQQVESPIGKVLRMTITG--GYLDGVRVDFSDHLNTVIGGRGTGKSTLLECLRYALD 307 >gi|317132449|ref|YP_004091763.1| SMC domain protein [Ethanoligenens harbinense YUAN-3] gi|315470428|gb|ADU27032.1| SMC domain protein [Ethanoligenens harbinense YUAN-3] Length = 1056 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + +S F + +++ F + L ++ G G GK++L +AI + YG Sbjct: 1 MKPLHLTMSAFGPYAGAEEVAFDAFGDNGLFLITGDTGAGKTTLFDAIAFALYGEASGTT 60 Query: 83 HGDSIKKRSIKTP 95 + P Sbjct: 61 RTPDTLRSDFARP 73 >gi|332978608|gb|EGK15312.1| SMC domain protein [Psychrobacter sp. 1501(2011)] Length = 1358 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L+++ + + I+F+D + + GQ G GK+++ +AI YG T R Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDKAFVNEGIFAITGQTGAGKTTILDAICLALYGETPR 60 >gi|308188763|ref|YP_003932894.1| DNA replication and repair protein recF [Pantoea vagans C9-1] gi|308059273|gb|ADO11445.1| DNA replication and repair protein recF [Pantoea vagans C9-1] Length = 361 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E ++ A + G NG GK+S+ EAI L +G + R Sbjct: 1 MALTRLLIKDFRNI-EQADLQLAPGFNFLVGVNGSGKTSVLEAIHTLGHGRSFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|224477953|ref|YP_002635559.1| recombination protein F [Staphylococcus carnosus subsp. carnosus TM300] gi|254790488|sp|B9DPX1|RECF_STACT RecName: Full=DNA replication and repair protein recF gi|222422560|emb|CAL29374.1| DNA repair and genetic recombination protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 370 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ ++R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNALQLENYRNY-EEVVLDCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKKRSIK 93 + + + + Sbjct: 60 LIRFNAE 66 >gi|198415697|ref|XP_002122639.1| PREDICTED: similar to Structural maintenance of chromosomes protein 6 (hSMC6) [Ciona intestinalis] Length = 1072 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +F T + F+ + + G NG GKS++ AI G G S+K Sbjct: 39 LESISLRNFMCHT-RLSMRFSGGVNFIVGHNGSGKSAVLTAIVIALGGKASSTSRGTSLK 97 >gi|172037351|ref|YP_001803852.1| DNA repair protein [Cyanothece sp. ATCC 51142] gi|171698805|gb|ACB51786.1| DNA repair protein [Cyanothece sp. ATCC 51142] Length = 588 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I +F + +EF L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSLLQIKNF-ALVDRLTLEFGQGLNVLTGETGAGKSIILDAIDVVLGGKVNNRL 54 >gi|68062825|ref|XP_673421.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491259|emb|CAI02389.1| hypothetical protein PB300714.00.0 [Plasmodium berghei] Length = 197 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I I R + + Q++EF+ +TI+ G NG GKS++ E ++ Sbjct: 4 LDKIGIQGIRSYCDEYSQQLEFSSPITIIYGNNGSGKSTIIECLK 48 >gi|58390368|ref|XP_317674.2| AGAP007826-PA [Anopheles gambiae str. PEST] gi|55237888|gb|EAA12256.2| AGAP007826-PA [Anopheles gambiae str. PEST] Length = 1376 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 72 IERITNYNFKSYAGHVMLGPFHQRFSSIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 130 >gi|269105277|ref|ZP_06157968.1| hypothetical protein VDA_000007 [Photobacterium damselae subsp. damselae CIP 102761] gi|268160498|gb|EEZ39000.1| hypothetical protein VDA_000007 [Photobacterium damselae subsp. damselae CIP 102761] Length = 458 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSE 68 L IEI+ +RGF ++F LTI+ G N GKSS+ E Sbjct: 1 MALDKIEINGYRGFNNEVSVKFAVPNGEPGSGLTIITGANNSGKSSIIE 49 >gi|225562424|gb|EEH10703.1| structural maintenance of chromosomes protein 1 [Ajellomyces capsulatus G186AR] Length = 1271 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 13/78 (16%) Query: 28 KLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSL-----------SEAIEWLFY 75 KL+ +E+ +F+ + + F D + G NG GKS+ +AI ++ Sbjct: 3 KLIRLELFNFKSYKGHHTLLFGDAYFASIIGPNGSGKSNSSVSPFPNAYYRMDAISFVL- 61 Query: 76 GYTQRRKHGDSIKKRSIK 93 G ++ + Sbjct: 62 GIKSSHLRSTHLRDLVYR 79 >gi|67526005|ref|XP_661064.1| hypothetical protein AN3460.2 [Aspergillus nidulans FGSC A4] gi|40743814|gb|EAA63000.1| hypothetical protein AN3460.2 [Aspergillus nidulans FGSC A4] Length = 1548 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 106 LERVECYNFMCH-DHFQVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASTTNRGQSLK 164 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 165 -SFIKEGKESATIIVRIKNQ 183 >gi|331004663|ref|ZP_08328125.1| hypothetical protein HMPREF0491_02987 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409590|gb|EGG89030.1| hypothetical protein HMPREF0491_02987 [Lachnospiraceae oral taxon 107 str. F0167] Length = 363 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ +R + E I+ + + I G N GK+++ E+I + R I Sbjct: 3 IESLELKDYRNY-ENLDIKLSSGVNIFYGDNAQGKTNILESIYLATTSKSHRGSKDKDII 61 Query: 89 KRSI 92 K Sbjct: 62 KFGS 65 >gi|300855212|ref|YP_003780196.1| putative nuclease sbcCD subunit C [Clostridium ljungdahlii DSM 13528] gi|300435327|gb|ADK15094.1| predicted nuclease sbcCD, subunit C [Clostridium ljungdahlii DSM 13528] Length = 1164 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + ++I F E Q I+F L + G G GKS++ + + YG T R+ Sbjct: 1 MKPIRLKIKGLNSFIESQCIDFGKLTQRGLFGIFGPTGSGKSTILDGMTLALYGETSRK 59 >gi|298710689|emb|CBJ32113.1| conserved unknown protein [Ectocarpus siliculosus] Length = 107 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ +++ +F + + + + F L +V G NG GKS+L AI G + R Sbjct: 37 IVSLKMKNFLVYKDAKAV-FGPRLNMVVGPNGSGKSTLVCAIALGLGGSLKAR 88 >gi|293395481|ref|ZP_06639765.1| recombination protein F [Serratia odorifera DSM 4582] gi|291422165|gb|EFE95410.1| recombination protein F [Serratia odorifera DSM 4582] Length = 373 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + + + FR ++Q ++ L +++G NG GKS+L +A+ Sbjct: 7 LSMTIQRLNLKGFRSIRDMQ-LDLGR-LNVISGPNGCGKSNLYKAVR 51 >gi|260654734|ref|ZP_05860222.1| DNA replication and repair protein RecF [Jonquetella anthropi E3_33 E1] gi|260630449|gb|EEX48643.1| DNA replication and repair protein RecF [Jonquetella anthropi E3_33 E1] Length = 87 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I+ FR F + F ++T++ GQNG GKS++ + Y ++ + DS Sbjct: 3 ISLQKLHINKFRIFKDKT-FYFGKYITVIAGQNGVGKSNILGLVANCI-QYKKKGQRKDS 60 >gi|47879|emb|CAA44366.1| recF protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 355 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G N GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGPNASGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|57641330|ref|YP_183808.1| ATP-dependent endonuclease [Thermococcus kodakarensis KOD1] gi|57159654|dbj|BAD85584.1| predicted ATP-dependent endonuclease, OLD family [Thermococcus kodakarensis KOD1] Length = 653 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++++IE+++FR K+ D LT++ G+NG GKSSL +A++ LF+ + D Sbjct: 1 MRIVEIEVNNFRSLRA-VKMPL-DELTVLIGRNGAGKSSLLQALD-LFFNPNAKYSEEDF 57 Query: 87 IKKRSIKTPMPMCMAV 102 + T P+ +A+ Sbjct: 58 YNR---DTSKPIRIAI 70 >gi|319775075|ref|YP_004137563.1| DNA replication and repair protein RecF [Haemophilus influenzae F3047] gi|329123014|ref|ZP_08251585.1| recombination protein F [Haemophilus aegyptius ATCC 11116] gi|317449666|emb|CBY85872.1| DNA replication and repair protein RecF [Haemophilus influenzae F3047] gi|327471945|gb|EGF17385.1| recombination protein F [Haemophilus aegyptius ATCC 11116] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|296119490|ref|ZP_06838048.1| putative ATPase [Corynebacterium ammoniagenes DSM 20306] gi|295967373|gb|EFG80640.1| putative ATPase [Corynebacterium ammoniagenes DSM 20306] Length = 889 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 8/77 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ IE+ +FRG + E D +T+++G+N GK+++ +AI+ L KH Sbjct: 1 MRIHSIELKNFRGIKHLNVEEIPDTGVTVIHGRNEAGKTTILQAIDTLI-------KHKF 53 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ ++ P+ V Sbjct: 54 KSKRAEVRALQPVNADV 70 >gi|241760014|ref|ZP_04758112.1| conserved hypothetical protein [Neisseria flavescens SK114] gi|241319468|gb|EER55898.1| conserved hypothetical protein [Neisseria flavescens SK114] Length = 481 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%) Query: 27 FKLLDIEISHFRGF-TEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I +S+F+GF + +I F L I G+N GKSS+ EAI +L G Sbjct: 1 MFIKSICLSNFKGFIGDNHRINFKTPDGTTPGSGLNIFIGENNSGKSSIFEAINFLRNGI 60 Query: 78 TQRRKHGDSIKKRSIKTP--MPMCMAVPRC 105 + H K + + + C+ + C Sbjct: 61 KEDDAHRIKSKLSNGRQSDGVEACVELAFC 90 >gi|229843949|ref|ZP_04464090.1| recombination protein F [Haemophilus influenzae 6P18H1] gi|229812943|gb|EEP48631.1| recombination protein F [Haemophilus influenzae 6P18H1] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|229846049|ref|ZP_04466161.1| recombination protein F [Haemophilus influenzae 7P49H1] gi|229811053|gb|EEP46770.1| recombination protein F [Haemophilus influenzae 7P49H1] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|148826361|ref|YP_001291114.1| recombination protein F [Haemophilus influenzae PittEE] gi|148716521|gb|ABQ98731.1| recombination protein F [Haemophilus influenzae PittEE] Length = 360 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 10 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 68 Query: 87 IKKRSIKTP 95 I S P Sbjct: 69 II--SYDEP 75 >gi|145634167|ref|ZP_01789878.1| recombination protein F [Haemophilus influenzae PittAA] gi|145268611|gb|EDK08604.1| recombination protein F [Haemophilus influenzae PittAA] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|145637297|ref|ZP_01792958.1| recombination protein F [Haemophilus influenzae PittHH] gi|145269549|gb|EDK09491.1| recombination protein F [Haemophilus influenzae PittHH] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|145630087|ref|ZP_01785869.1| recombination protein F [Haemophilus influenzae R3021] gi|144984368|gb|EDJ91791.1| recombination protein F [Haemophilus influenzae R3021] Length = 299 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|68249576|ref|YP_248688.1| recombination protein F [Haemophilus influenzae 86-028NP] gi|145632377|ref|ZP_01788112.1| recombination protein F [Haemophilus influenzae 3655] gi|145640665|ref|ZP_01796248.1| recombination protein F [Haemophilus influenzae R3021] gi|81335995|sp|Q4QLR9|RECF_HAEI8 RecName: Full=DNA replication and repair protein recF gi|68057775|gb|AAX88028.1| DNA replication and repair protein RecF [Haemophilus influenzae 86-028NP] gi|144987284|gb|EDJ93814.1| recombination protein F [Haemophilus influenzae 3655] gi|145274591|gb|EDK14454.1| recombination protein F [Haemophilus influenzae 22.4-21] gi|301169717|emb|CBW29318.1| gap repair protein [Haemophilus influenzae 10810] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|1074046|pir||I64106 recF protein - Haemophilus influenzae (strain Rd KW20) Length = 375 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 17 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 75 Query: 87 IKKRSIKTP 95 I S P Sbjct: 76 II--SYDEP 82 >gi|16272929|ref|NP_439154.1| recombination protein F [Haemophilus influenzae Rd KW20] gi|260580082|ref|ZP_05847912.1| recombination protein F [Haemophilus influenzae RdAW] gi|1172892|sp|P43767|RECF_HAEIN RecName: Full=DNA replication and repair protein recF gi|1574021|gb|AAC22653.1| DNA/ATP binding protein (recF) [Haemophilus influenzae Rd KW20] gi|260093366|gb|EEW77299.1| recombination protein F [Haemophilus influenzae RdAW] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|309973509|gb|ADO96710.1| DNA replication and repair protein RecF [Haemophilus influenzae R2846] Length = 359 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T ++F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|210134563|ref|YP_002301002.1| hypothetical protein HPP12_0365 [Helicobacter pylori P12] gi|210132531|gb|ACJ07522.1| hypothetical protein HPP12_0365 [Helicobacter pylori P12] Length = 381 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|154300358|ref|XP_001550595.1| hypothetical protein BC1G_11368 [Botryotinia fuckeliana B05.10] gi|150856691|gb|EDN31883.1| hypothetical protein BC1G_11368 [Botryotinia fuckeliana B05.10] Length = 1158 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F + K+ + V G+NG GKS++ I G G S+K Sbjct: 111 IEEIQCVNFMNH-KNLKVPLGPLINFVVGENGAGKSAVLTGITLCLGGKPSATNRGSSMK 169 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IKT M + R K Q Sbjct: 170 SL-IKTGTDRGMLLVRLKNQ 188 >gi|149202935|ref|ZP_01879906.1| recombination protein F [Roseovarius sp. TM1035] gi|149143481|gb|EDM31517.1| recombination protein F [Roseovarius sp. TM1035] Length = 369 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ +SHFR + + A + ++G NG GK++L EAI L G RR Sbjct: 4 LYLSELTLSHFRSHKSGRLLLDARPV-AIHGPNGAGKTNLIEAISLLSPGRGLRRAAAQD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MARR 66 >gi|300719139|ref|YP_003743942.1| DNA replication and repair protein [Erwinia billingiae Eb661] gi|299064975|emb|CAX62095.1| DNA replication and repair protein [Erwinia billingiae Eb661] Length = 361 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ENADLALAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|225874788|ref|YP_002756247.1| hypothetical protein ACP_3245 [Acidobacterium capsulatum ATCC 51196] gi|225792214|gb|ACO32304.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC 51196] Length = 615 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I+HFRG E ++F T++ G N GKS++ EA++ + Sbjct: 1 MRVRRLKITHFRGVAEG-SVDFT-GHTLLVGGNNIGKSTICEALDLVLG 47 >gi|255279938|ref|ZP_05344493.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] gi|255269711|gb|EET62916.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] Length = 528 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++++I + HF F Q +EF + ++ G N GKS++ I +F+G + R Sbjct: 1 MEIIEIRMDHFGKFNG-QSMEFHPGINVIYGDNETGKSTMRSFIRGMFFGIDRMRGRAAQ 59 Query: 87 IKKRSIKTPMP 97 + S++ P Sbjct: 60 QDEYSLRQPWE 70 >gi|212696883|ref|ZP_03305011.1| hypothetical protein ANHYDRO_01446 [Anaerococcus hydrogenalis DSM 7454] gi|212676173|gb|EEB35780.1| hypothetical protein ANHYDRO_01446 [Anaerococcus hydrogenalis DSM 7454] Length = 376 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + +E+ F + I+F + + I++G G GK+S+ +AI + +G QR Sbjct: 1 MKPVSLEMYGFMTYKNKTFIDFTKLYSSKIFIISGDTGSGKTSIFDAISFALFGEVQR 58 >gi|242025206|ref|XP_002433017.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212518526|gb|EEB20279.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1052 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ ++I++F + ++ I+F + + G+NG GKS++ A+ + G G + Sbjct: 25 KIECLQITNFMCHSNLE-IKFNSMINFITGRNGSGKSAIMTALIVVLGGTATITGRGSGL 83 Query: 88 KK 89 Sbjct: 84 SD 85 >gi|255945211|ref|XP_002563373.1| Pc20g08500 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588108|emb|CAP86179.1| Pc20g08500 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1141 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + +E + + G+NG GKS++ AI G G S+K Sbjct: 101 LERVECYNFMCH-DHFYVELGPLINFIVGKNGSGKSAILTAITLCLGGKASATNRGQSLK 159 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 160 -SFIKEGKENSTIIVRIKNQ 178 >gi|150016495|ref|YP_001308749.1| hypothetical protein Cbei_1619 [Clostridium beijerinckii NCIMB 8052] gi|149902960|gb|ABR33793.1| conserved hypothetical protein [Clostridium beijerinckii NCIMB 8052] Length = 663 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I +F+G ++ ++F ++T + G N GK+++ ++ WL +G + + IK Sbjct: 6 IKKLIIKNFKGVKALE-VDFG-NITNILGGNATGKTTIFDSFCWLLFGKDSKDRKDFEIK 63 >gi|332304389|ref|YP_004432240.1| DNA replication and repair protein RecF [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171718|gb|AEE20972.1| DNA replication and repair protein RecF [Glaciecola agarilytica 4H-3-7+YE-5] Length = 363 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL ++I + R + + + + + G NG GKSS+ EAI +L +G + R Sbjct: 1 MKLDSVQIRNLRNL-QQVSLNPSHGVNFILGINGSGKSSILEAIHYLGFGRSFRTTKHKH 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIQSDQES 67 >gi|284044414|ref|YP_003394754.1| DNA repair exonuclease, SbcC [Conexibacter woesei DSM 14684] gi|283948635|gb|ADB51379.1| DNA repair exonuclease, SbcC [Conexibacter woesei DSM 14684] Length = 1191 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVN----GQNGYGKSSLSEAIEWLFYG------ 76 +L + ++ F+ F ++I+F G G GK++L +A+ + YG Sbjct: 1 MRLHRLRVTAFQAFAATEEIDFDALAAAGLFLLHGDTGAGKTTLLDAVCFALYGDVPGAR 60 Query: 77 YTQRRKHGDSIKKRSIKTPMPMCMAV 102 R D ++T + + + + Sbjct: 61 SRDSRLRSDH-ADPGVRTEVELDVTL 85 >gi|315497054|ref|YP_004085858.1| DNA replication and repair protein recf [Asticcacaulis excentricus CB 48] gi|315415066|gb|ADU11707.1| DNA replication and repair protein RecF [Asticcacaulis excentricus CB 48] Length = 374 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++ FR + + ++ + + G NG GK++ EAI L G R G ++ Sbjct: 4 RIHALSLTDFRSY-DRLDVDLSGRSLYLFGPNGAGKTNFLEAISVLNPG---RGLRGAAV 59 Query: 88 KKRSIKTPMP 97 + P Sbjct: 60 SDLGRRLPQE 69 >gi|237802507|ref|YP_002887701.1| recombination protein F [Chlamydia trachomatis B/Jali20/OT] gi|231273741|emb|CAX10521.1| DNA replication and repair protein [Chlamydia trachomatis B/Jali20/OT] Length = 365 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 ++ + + FR +T++ ++E + + G N GK++L EA+ L G + R D Sbjct: 1 MRVHSLFLKDFRNYTDL-RLELGPEMNSIFGLNAQGKTNLLEALYILSLGRSFRTSRLTD 59 Query: 86 SIKK 89 +I+ Sbjct: 60 AIRF 63 >gi|229020732|ref|ZP_04177455.1| Exonuclease SbcC [Bacillus cereus AH1273] gi|228740533|gb|EEL90808.1| Exonuclease SbcC [Bacillus cereus AH1273] Length = 520 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + +I + F+ T + L ++ G + GK+S+ A+ W+ + Sbjct: 3 VLANINEIFVEGFQSHT-NSHFNLGNGLNVITGPSDSGKTSIIRAVRWIAF 52 >gi|51244378|ref|YP_064262.1| ATP-dependent dsDNA exonuclease (SBCC) [Desulfotalea psychrophila LSv54] gi|50875415|emb|CAG35255.1| related to ATP-dependent dsDNA exonuclease (SBCC) [Desulfotalea psychrophila LSv54] Length = 1081 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F AD + + G G GKS++ +AI YG T R Sbjct: 1 MKILQLRFKNLNSLVGEWAIDFTAAEYLADGIFAITGPTGAGKSTILDAICLALYGKTPR 60 >gi|146276062|ref|YP_001166221.1| recombination protein F [Rhodobacter sphaeroides ATCC 17025] gi|145554303|gb|ABP68916.1| DNA replication and repair protein RecF [Rhodobacter sphaeroides ATCC 17025] Length = 363 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR ++ F G NG GK+++ EAI L G RR D I Sbjct: 6 VTSLALSHFRSHRA-ARMAFDGRPVAFVGANGAGKTNVLEAISLLSPGRGLRRAAADEIA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|323705851|ref|ZP_08117423.1| DNA replication and repair protein RecF [Thermoanaerobacterium xylanolyticum LX-11] gi|323534847|gb|EGB24626.1| DNA replication and repair protein RecF [Thermoanaerobacterium xylanolyticum LX-11] Length = 362 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ + +F+ + QK+ F+ ++ G N GKS+L E I L G + R Sbjct: 1 MYLKELIVDNFKNL-KHQKVIFSAGTNVIYGSNAQGKSNLLECIRLLSIGKSFRNSKNRD 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|284040726|ref|YP_003390656.1| DNA repair ATPase [Spirosoma linguale DSM 74] gi|283820019|gb|ADB41857.1| ATPase-like protein involved in DNA repair [Spirosoma linguale DSM 74] Length = 1029 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 31 DIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + ++Q+I+F + + G+ G GK+SL EAI + YG T+R D+ Sbjct: 5 KLSIQGLYSYQDLQEIDFQQLIGSSVFGIFGKVGSGKTSLLEAISFALYGETERLNSRDN 64 >gi|302669693|ref|YP_003829653.1| exonuclease SbcC [Butyrivibrio proteoclasticus B316] gi|302394166|gb|ADL33071.1| exonuclease SbcC [Butyrivibrio proteoclasticus B316] Length = 923 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ +S F + K+ D L ++ G G GK+++ +AI + +G Sbjct: 1 MRPINLNLSAFGPYAGEIKLNMDDLGDKGLYLITGDTGAGKTTIFDAICFALFGEASGGS 60 Query: 83 HGDSIKKRSI---KTPMPMCMA 101 ++ + TP + M+ Sbjct: 61 REAAMLRSKYAEADTPTFVEMS 82 >gi|291460145|ref|ZP_06599535.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417486|gb|EFE91205.1| putative RecF/RecN/SMC N domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 434 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + ++ A LTI+ G+N GK+S+ +AI W G R Sbjct: 3 IKINKLEIENVKRVKAVKLEPSASGLTIIGGKNNQGKTSVLDAIAWTLGGNNFR 56 >gi|190358624|ref|NP_001121806.1| structural maintenance of chromosomes protein 6 [Danio rerio] gi|148725618|emb|CAN88051.1| novel protein similar to vertebrate structural maintenance of chromosomes 6 (SMC6) [Danio rerio] Length = 1090 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + F ++ V G NG GKS++ A+ G G S+K Sbjct: 52 IESISLRNFMCHSLLGPFAFGPNVNFVVGNNGSGKSAVLTALIVALGGKALTTNRGSSLK 111 >gi|28316404|dbj|BAC56937.1| structural maintenance of chromosomes protein 6 [Xenopus laevis] Length = 1128 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + F ++ V G NG GKS++ A+ G G SIK Sbjct: 87 IESIFLRNFMCHSMLGPFRFGPNVNFVIGNNGSGKSAVLTALIVGLGGKAAITNRGSSIK 146 >gi|333010836|gb|EGK30262.1| exonuclease sbcC [Shigella flexneri K-272] gi|333021335|gb|EGK40588.1| exonuclease sbcC [Shigella flexneri K-227] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|333008589|gb|EGK28057.1| exonuclease sbcC [Shigella flexneri VA-6] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|332761698|gb|EGJ91977.1| exonuclease sbcC [Shigella flexneri 2747-71] gi|332768500|gb|EGJ98683.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2930-71] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|332760674|gb|EGJ90962.1| exonuclease sbcC [Shigella flexneri 4343-70] gi|333007760|gb|EGK27236.1| exonuclease sbcC [Shigella flexneri K-218] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|332094545|gb|EGI99591.1| exonuclease sbcC [Shigella boydii 5216-82] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|330910189|gb|EGH38699.1| exonuclease SbcC [Escherichia coli AA86] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|325498320|gb|EGC96179.1| exonuclease subunit SbcC [Escherichia fergusonii ECD227] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|324010123|gb|EGB79342.1| nuclease sbcCD, subunit C [Escherichia coli MS 57-2] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323976123|gb|EGB71216.1| exonuclease SbcC [Escherichia coli TW10509] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323965346|gb|EGB60804.1| exonuclease SbcC [Escherichia coli M863] gi|327254712|gb|EGE66328.1| exonuclease sbcC [Escherichia coli STEC_7v] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323963382|gb|EGB58944.1| exonuclease SbcC [Escherichia coli H489] Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323945296|gb|EGB41352.1| exonuclease SbcC [Escherichia coli H120] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323943202|gb|EGB39358.1| exonuclease SbcC [Escherichia coli E482] Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323191313|gb|EFZ76576.1| exonuclease sbcC [Escherichia coli RN587/1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323184778|gb|EFZ70149.1| exonuclease sbcC [Escherichia coli 1357] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323170476|gb|EFZ56126.1| exonuclease sbcC [Escherichia coli LT-68] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|323164187|gb|EFZ49994.1| exonuclease sbcC [Shigella sonnei 53G] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|320656009|gb|EFX23925.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662566|gb|EFX29955.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. USDA 5905] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|320197168|gb|EFW71785.1| Exonuclease SbcC [Escherichia coli WV_060327] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|320181623|gb|EFW56538.1| Exonuclease SbcC [Shigella boydii ATCC 9905] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|320173787|gb|EFW48970.1| Exonuclease SbcC [Shigella dysenteriae CDC 74-1112] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|315299627|gb|EFU58875.1| nuclease sbcCD, subunit C [Escherichia coli MS 16-3] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|312964583|ref|ZP_07778839.1| exonuclease sbcC [Escherichia coli 2362-75] gi|312290817|gb|EFR18694.1| exonuclease sbcC [Escherichia coli 2362-75] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|309700658|emb|CBI99954.1| exonuclease SbcC [Escherichia coli ETEC H10407] Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|311280720|ref|YP_003942951.1| exonuclease SbcC [Enterobacter cloacae SCF1] gi|308749915|gb|ADO49667.1| exonuclease SbcC [Enterobacter cloacae SCF1] Length = 1046 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|309794881|ref|ZP_07689302.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7] gi|308121534|gb|EFO58796.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331681789|ref|ZP_08382422.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299] gi|331080991|gb|EGI52156.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331671944|ref|ZP_08372740.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280] gi|331070933|gb|EGI42292.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331661769|ref|ZP_08362692.1| exonuclease SbcC [Escherichia coli TA143] gi|331060191|gb|EGI32155.1| exonuclease SbcC [Escherichia coli TA143] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331656449|ref|ZP_08357411.1| exonuclease SbcC [Escherichia coli TA206] gi|331054697|gb|EGI26706.1| exonuclease SbcC [Escherichia coli TA206] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331651325|ref|ZP_08352350.1| exonuclease SbcC [Escherichia coli M718] gi|331051066|gb|EGI23118.1| exonuclease SbcC [Escherichia coli M718] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|331645567|ref|ZP_08346671.1| exonuclease SbcC [Escherichia coli M605] gi|331045729|gb|EGI17855.1| exonuclease SbcC [Escherichia coli M605] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|307312228|ref|ZP_07591864.1| exonuclease SbcC [Escherichia coli W] gi|306907730|gb|EFN38232.1| exonuclease SbcC [Escherichia coli W] gi|315059674|gb|ADT74001.1| ATP-dependent dsDNA exonuclease [Escherichia coli W] gi|323379760|gb|ADX52028.1| exonuclease SbcC [Escherichia coli KO11] gi|324116880|gb|EGC10793.1| exonuclease SbcC [Escherichia coli E1167] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|306813137|ref|ZP_07447330.1| exonuclease subunit SbcC [Escherichia coli NC101] gi|305853900|gb|EFM54339.1| exonuclease subunit SbcC [Escherichia coli NC101] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|301330746|ref|ZP_07223347.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1] gi|300843318|gb|EFK71078.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|300818282|ref|ZP_07098493.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1] gi|300529173|gb|EFK50235.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|300820367|ref|ZP_07100519.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7] gi|331666743|ref|ZP_08367617.1| nuclease sbcCD, subunit C [Escherichia coli TA271] gi|331676062|ref|ZP_08376774.1| nuclease sbcCD, subunit C [Escherichia coli H591] gi|300527152|gb|EFK48221.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7] gi|331065967|gb|EGI37851.1| nuclease sbcCD, subunit C [Escherichia coli TA271] gi|331076120|gb|EGI47402.1| nuclease sbcCD, subunit C [Escherichia coli H591] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F+ + L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFSREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|300936380|ref|ZP_07151308.1| nuclease sbcCD, subunit C [Escherichia coli MS 21-1] gi|300458486|gb|EFK21979.1| nuclease sbcCD, subunit C [Escherichia coli MS 21-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|300918226|ref|ZP_07134832.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1] gi|300414611|gb|EFJ97921.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|300903341|ref|ZP_07121269.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1] gi|301301542|ref|ZP_07207677.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1] gi|300404636|gb|EFJ88174.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1] gi|300843039|gb|EFK70799.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1] gi|315256219|gb|EFU36187.1| nuclease sbcCD, subunit C [Escherichia coli MS 85-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|301025455|ref|ZP_07189002.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1] gi|300395970|gb|EFJ79508.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|301049594|ref|ZP_07196546.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1] gi|300298639|gb|EFJ55024.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|301025779|ref|ZP_07189291.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1] gi|299879982|gb|EFI88193.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1] Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|297517633|ref|ZP_06936019.1| exonuclease subunit SbcC [Escherichia coli OP50] Length = 553 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|293408541|ref|ZP_06652380.1| nuclease SbcCD [Escherichia coli B354] gi|291471719|gb|EFF14202.1| nuclease SbcCD [Escherichia coli B354] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|293413649|ref|ZP_06656298.1| exonuclease subunit SbcC [Escherichia coli B185] gi|291433707|gb|EFF06680.1| exonuclease subunit SbcC [Escherichia coli B185] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|293418463|ref|ZP_06660898.1| exonuclease subunit SbcC [Escherichia coli B088] gi|291324991|gb|EFE64406.1| exonuclease subunit SbcC [Escherichia coli B088] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|284920203|emb|CBG33262.1| exonuclease SbcC [Escherichia coli 042] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|281177567|dbj|BAI53897.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE15] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|260866556|ref|YP_003232958.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str. 11128] gi|257762912|dbj|BAI34407.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str. 11128] gi|323178341|gb|EFZ63919.1| exonuclease sbcC [Escherichia coli 1180] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|260853617|ref|YP_003227508.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str. 11368] gi|257752266|dbj|BAI23768.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str. 11368] gi|323152136|gb|EFZ38429.1| exonuclease sbcC [Escherichia coli EPECa14] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|256020364|ref|ZP_05434229.1| exonuclease subunit SbcC [Shigella sp. D9] gi|332281541|ref|ZP_08393954.1| nuclease SbcCD [Shigella sp. D9] gi|332103893|gb|EGJ07239.1| nuclease SbcCD [Shigella sp. D9] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|291281300|ref|YP_003498118.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615] gi|209744260|gb|ACI70437.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|290761173|gb|ADD55134.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|209744254|gb|ACI70434.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|320643765|gb|EFX12888.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. 493-89] gi|320649116|gb|EFX17694.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. H 2687] gi|320665136|gb|EFX32229.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. LSU-61] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|227884597|ref|ZP_04002402.1| exonuclease subunit SbcC [Escherichia coli 83972] gi|227838683|gb|EEJ49149.1| exonuclease subunit SbcC [Escherichia coli 83972] gi|307552301|gb|ADN45076.1| exonuclease SbcC [Escherichia coli ABU 83972] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|222032192|emb|CAP74931.1| exonuclease sbcC [Escherichia coli LF82] gi|312944974|gb|ADR25801.1| exonuclease subunit SbcC [Escherichia coli O83:H1 str. NRG 857C] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|218703678|ref|YP_002411197.1| exonuclease subunit SbcC [Escherichia coli UMN026] gi|293403514|ref|ZP_06647605.1| exonuclease subunit SbcC [Escherichia coli FVEC1412] gi|298379126|ref|ZP_06989007.1| exonuclease subunit SbcC [Escherichia coli FVEC1302] gi|300900457|ref|ZP_07118626.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1] gi|218430775|emb|CAR11649.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli UMN026] gi|291429367|gb|EFF02387.1| exonuclease subunit SbcC [Escherichia coli FVEC1412] gi|298280239|gb|EFI21743.1| exonuclease subunit SbcC [Escherichia coli FVEC1302] gi|300356048|gb|EFJ71918.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|218688259|ref|YP_002396471.1| exonuclease subunit SbcC [Escherichia coli ED1a] gi|218425823|emb|CAR06629.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli ED1a] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|218698699|ref|YP_002406328.1| exonuclease subunit SbcC [Escherichia coli IAI39] gi|218368685|emb|CAR16425.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli IAI39] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|218549944|ref|YP_002383735.1| exonuclease subunit SbcC [Escherichia fergusonii ATCC 35469] gi|218357485|emb|CAQ90124.1| Exonuclease sbcC [Escherichia fergusonii ATCC 35469] gi|324114616|gb|EGC08584.1| exonuclease SbcC [Escherichia fergusonii B253] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|215485478|ref|YP_002327909.1| exonuclease subunit SbcC [Escherichia coli O127:H6 str. E2348/69] gi|215263550|emb|CAS07880.1| exonuclease SbcC, dsDNA, ATP-dependent [Escherichia coli O127:H6 str. E2348/69] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|212637853|ref|YP_002314373.1| recombination protein F [Anoxybacillus flavithermus WK1] gi|212559333|gb|ACJ32388.1| Recombinational DNA repair ATPase RecF [Anoxybacillus flavithermus WK1] Length = 379 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + ++R + E +F + + ++ G+N GK+++ E+I L + R + + Sbjct: 11 LEQLTLKNYRNY-EQGCWQFQNKVNVILGENAQGKTNIMESIYVLSMAKSHRTTNDKDLI 69 Query: 89 K 89 + Sbjct: 70 R 70 >gi|170767737|ref|ZP_02902190.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627] gi|170123225|gb|EDS92156.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168786234|ref|ZP_02811241.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869] gi|189373584|gb|EDU92000.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168756929|ref|ZP_02781936.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401] gi|189355999|gb|EDU74418.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|170682477|ref|YP_001742529.1| exonuclease subunit SbcC [Escherichia coli SMS-3-5] gi|170520195|gb|ACB18373.1| nuclease SbcCD, C subunit [Escherichia coli SMS-3-5] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|110804420|ref|YP_687940.1| exonuclease subunit SbcC [Shigella flexneri 5 str. 8401] gi|110613968|gb|ABF02635.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 5 str. 8401] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|91209463|ref|YP_539449.1| exonuclease subunit SbcC [Escherichia coli UTI89] gi|117622658|ref|YP_851571.1| exonuclease subunit SbcC [Escherichia coli APEC O1] gi|218557306|ref|YP_002390219.1| exonuclease subunit SbcC [Escherichia coli S88] gi|237707611|ref|ZP_04538092.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA] gi|91071037|gb|ABE05918.1| exonuclease SbcC [Escherichia coli UTI89] gi|115511782|gb|ABI99856.1| ATP-dependent dsDNA exonuclease [Escherichia coli APEC O1] gi|218364075|emb|CAR01740.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli S88] gi|226898821|gb|EEH85080.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA] gi|294490953|gb|ADE89709.1| nuclease SbcCD, C subunit [Escherichia coli IHE3034] gi|307628134|gb|ADN72438.1| exonuclease subunit SbcC [Escherichia coli UM146] gi|315289890|gb|EFU49280.1| nuclease sbcCD, subunit C [Escherichia coli MS 110-3] gi|323952992|gb|EGB48860.1| exonuclease SbcC [Escherichia coli H252] gi|323958589|gb|EGB54292.1| exonuclease SbcC [Escherichia coli H263] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|82775699|ref|YP_402046.1| exonuclease subunit SbcC [Shigella dysenteriae Sd197] gi|309786976|ref|ZP_07681588.1| exonuclease sbcC [Shigella dysenteriae 1617] gi|81239847|gb|ABB60557.1| ATP-dependent dsDNA exonuclease [Shigella dysenteriae Sd197] gi|308924554|gb|EFP70049.1| exonuclease sbcC [Shigella dysenteriae 1617] Length = 1045 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|82542886|ref|YP_406833.1| exonuclease subunit SbcC [Shigella boydii Sb227] gi|81244297|gb|ABB65005.1| ATP-dependent dsDNA exonuclease [Shigella boydii Sb227] gi|332098598|gb|EGJ03564.1| exonuclease sbcC [Shigella boydii 3594-74] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|74310966|ref|YP_309385.1| exonuclease subunit SbcC [Shigella sonnei Ss046] gi|73854443|gb|AAZ87150.1| ATP-dependent dsDNA exonuclease [Shigella sonnei Ss046] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|15800123|ref|NP_286135.1| exonuclease subunit SbcC [Escherichia coli O157:H7 EDL933] gi|168749849|ref|ZP_02774871.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113] gi|168761593|ref|ZP_02786600.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501] gi|168768338|ref|ZP_02793345.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486] gi|168776307|ref|ZP_02801314.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196] gi|168783253|ref|ZP_02808260.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076] gi|168800270|ref|ZP_02825277.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508] gi|195938542|ref|ZP_03083924.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. EC4024] gi|208806791|ref|ZP_03249128.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206] gi|208814881|ref|ZP_03256060.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045] gi|208823003|ref|ZP_03263321.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042] gi|209396784|ref|YP_002269034.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115] gi|217326260|ref|ZP_03442344.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588] gi|254791575|ref|YP_003076412.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. TW14359] gi|261223873|ref|ZP_05938154.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. FRIK2000] gi|261256413|ref|ZP_05948946.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. FRIK966] gi|12513240|gb|AAG54743.1|AE005218_8 ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str. EDL933] gi|187768269|gb|EDU32113.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196] gi|188015846|gb|EDU53968.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113] gi|188999354|gb|EDU68340.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076] gi|189362387|gb|EDU80806.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486] gi|189368061|gb|EDU86477.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501] gi|189377379|gb|EDU95795.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508] gi|208726592|gb|EDZ76193.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206] gi|208731529|gb|EDZ80217.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045] gi|208737196|gb|EDZ84880.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042] gi|209158184|gb|ACI35617.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115] gi|209744256|gb|ACI70435.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|209744258|gb|ACI70436.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|209744262|gb|ACI70438.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|217322481|gb|EEC30905.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588] gi|254590975|gb|ACT70336.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. TW14359] gi|320192807|gb|EFW67447.1| Exonuclease SbcC [Escherichia coli O157:H7 str. EC1212] gi|320638385|gb|EFX08099.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. G5101] gi|326341154|gb|EGD64946.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1044] gi|326346070|gb|EGD69809.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1125] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|26246400|ref|NP_752439.1| exonuclease subunit SbcC [Escherichia coli CFT073] gi|300988104|ref|ZP_07178541.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1] gi|26106798|gb|AAN78983.1|AE016756_166 Exonuclease sbcC [Escherichia coli CFT073] gi|300407518|gb|EFJ91056.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1] gi|315294174|gb|EFU53525.1| nuclease sbcCD, subunit C [Escherichia coli MS 153-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|24111775|ref|NP_706285.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 301] gi|30061893|ref|NP_836064.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 2457T] gi|24050561|gb|AAN41992.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 301] gi|30040137|gb|AAP15870.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 2457T] gi|281599728|gb|ADA72712.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2002017] gi|313646988|gb|EFS11445.1| exonuclease sbcC [Shigella flexneri 2a str. 2457T] gi|332764270|gb|EGJ94506.1| exonuclease sbcC [Shigella flexneri K-671] gi|333022044|gb|EGK41289.1| exonuclease sbcC [Shigella flexneri K-304] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|15829701|ref|NP_308474.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. Sakai] gi|13359904|dbj|BAB33870.1| ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str. Sakai] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|16128382|ref|NP_414931.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. MG1655] gi|89107267|ref|AP_001047.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. W3110] gi|170079983|ref|YP_001729303.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238899685|ref|YP_002925481.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952] gi|256023986|ref|ZP_05437851.1| exonuclease subunit SbcC [Escherichia sp. 4_1_40B] gi|300947958|ref|ZP_07162103.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1] gi|300957956|ref|ZP_07170123.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1] gi|301647314|ref|ZP_07247128.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1] gi|307137039|ref|ZP_07496395.1| exonuclease subunit SbcC [Escherichia coli H736] gi|331640911|ref|ZP_08342046.1| nuclease sbcCD, subunit C [Escherichia coli H736] gi|134253|sp|P13458|SBCC_ECOLI RecName: Full=Nuclease sbcCD subunit C gi|42914|emb|CAA34104.1| unnamed protein product [Escherichia coli K-12] gi|1657593|gb|AAB18121.1| exonuclease SbcC [Escherichia coli str. K-12 substr. MG1655] gi|1786597|gb|AAC73500.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. MG1655] gi|85674537|dbj|BAE76177.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K12 substr. W3110] gi|169887818|gb|ACB01525.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238861057|gb|ACR63055.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952] gi|260450416|gb|ACX40838.1| exonuclease SbcC [Escherichia coli DH1] gi|300315350|gb|EFJ65134.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1] gi|300452457|gb|EFK16077.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1] gi|301074539|gb|EFK89345.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1] gi|315135079|dbj|BAJ42238.1| exonuclease subunit SbcC [Escherichia coli DH1] gi|315616665|gb|EFU97282.1| exonuclease sbcC [Escherichia coli 3431] gi|323938581|gb|EGB34830.1| exonuclease SbcC [Escherichia coli E1520] gi|331037709|gb|EGI09929.1| nuclease sbcCD, subunit C [Escherichia coli H736] gi|332341758|gb|AEE55092.1| exonuclease subunit SbcC [Escherichia coli UMNK88] gi|1586769|prf||2204364A sbcC gene Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|194432634|ref|ZP_03064920.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012] gi|194419195|gb|EDX35278.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012] gi|332085911|gb|EGI91075.1| exonuclease sbcC [Shigella dysenteriae 155-74] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|194438845|ref|ZP_03070930.1| nuclease SbcCD, C subunit [Escherichia coli 101-1] gi|253774618|ref|YP_003037449.1| exonuclease subunit SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160464|ref|YP_003043572.1| exonuclease subunit SbcC [Escherichia coli B str. REL606] gi|300930312|ref|ZP_07145724.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1] gi|194422139|gb|EDX38141.1| nuclease SbcCD, C subunit [Escherichia coli 101-1] gi|242376175|emb|CAQ30866.1| ATP-dependent dsDNA exonuclease, subunit of SbcCD ATP-dependent dsDNA exonuclease [Escherichia coli BL21(DE3)] gi|253325662|gb|ACT30264.1| exonuclease SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972365|gb|ACT38036.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli B str. REL606] gi|253976574|gb|ACT42244.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BL21(DE3)] gi|300461772|gb|EFK25265.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1] gi|323972246|gb|EGB67456.1| exonuclease SbcC [Escherichia coli TA007] Length = 1048 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|110640658|ref|YP_668386.1| exonuclease subunit SbcC [Escherichia coli 536] gi|191173503|ref|ZP_03035030.1| nuclease SbcCD, C subunit [Escherichia coli F11] gi|300997417|ref|ZP_07181757.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1] gi|110342250|gb|ABG68487.1| exonuclease SbcC [Escherichia coli 536] gi|190906212|gb|EDV65824.1| nuclease SbcCD, C subunit [Escherichia coli F11] gi|300304236|gb|EFJ58756.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1] gi|324010707|gb|EGB79926.1| nuclease sbcCD, subunit C [Escherichia coli MS 60-1] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|193068718|ref|ZP_03049679.1| nuclease SbcCD, C subunit [Escherichia coli E110019] gi|192958081|gb|EDV88523.1| nuclease SbcCD, C subunit [Escherichia coli E110019] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|157155185|ref|YP_001461575.1| exonuclease subunit SbcC [Escherichia coli E24377A] gi|157077215|gb|ABV16923.1| nuclease SbcCD, C subunit [Escherichia coli E24377A] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|157159914|ref|YP_001457232.1| exonuclease subunit SbcC [Escherichia coli HS] gi|170021231|ref|YP_001726185.1| exonuclease subunit SbcC [Escherichia coli ATCC 8739] gi|188491739|ref|ZP_02999009.1| exonuclease sbcC [Escherichia coli 53638] gi|193065209|ref|ZP_03046282.1| nuclease SbcCD, C subunit [Escherichia coli E22] gi|194428843|ref|ZP_03061378.1| nuclease SbcCD, C subunit [Escherichia coli B171] gi|209917608|ref|YP_002291692.1| exonuclease subunit SbcC [Escherichia coli SE11] gi|218552959|ref|YP_002385872.1| exonuclease subunit SbcC [Escherichia coli IAI1] gi|218693857|ref|YP_002401524.1| exonuclease subunit SbcC [Escherichia coli 55989] gi|260842595|ref|YP_003220373.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str. 12009] gi|312970490|ref|ZP_07784671.1| exonuclease sbcC [Escherichia coli 1827-70] gi|157065594|gb|ABV04849.1| nuclease SbcCD, C subunit [Escherichia coli HS] gi|169756159|gb|ACA78858.1| exonuclease SbcC [Escherichia coli ATCC 8739] gi|188486938|gb|EDU62041.1| exonuclease sbcC [Escherichia coli 53638] gi|192927183|gb|EDV81804.1| nuclease SbcCD, C subunit [Escherichia coli E22] gi|194413146|gb|EDX29433.1| nuclease SbcCD, C subunit [Escherichia coli B171] gi|209910867|dbj|BAG75941.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE11] gi|218350589|emb|CAU96279.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli 55989] gi|218359727|emb|CAQ97268.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli IAI1] gi|257757742|dbj|BAI29239.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str. 12009] gi|310337139|gb|EFQ02277.1| exonuclease sbcC [Escherichia coli 1827-70] gi|320201638|gb|EFW76214.1| Exonuclease SbcC [Escherichia coli EC4100B] gi|323160498|gb|EFZ46446.1| exonuclease sbcC [Escherichia coli E128010] gi|324016664|gb|EGB85883.1| nuclease sbcCD, subunit C [Escherichia coli MS 117-3] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|187732182|ref|YP_001879105.1| exonuclease subunit SbcC [Shigella boydii CDC 3083-94] gi|187429174|gb|ACD08448.1| nuclease SbcCD, C subunit [Shigella boydii CDC 3083-94] Length = 1047 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|325280472|ref|YP_004253014.1| hypothetical protein Odosp_1818 [Odoribacter splanchnicus DSM 20712] gi|324312281|gb|ADY32834.1| hypothetical protein Odosp_1818 [Odoribacter splanchnicus DSM 20712] Length = 535 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEA 69 ++ +I++ HF+ FT++ I L ++ G NG GK+S+ EA Sbjct: 1 MRIKEIKLRHFKRFTDLTICGIPETAKLVVLVGPNGCGKTSIFEA 45 >gi|237831333|ref|XP_002364964.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49] gi|211962628|gb|EEA97823.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49] Length = 1599 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + R F I F LT++ G NG GK+++ E +++ G Sbjct: 4 LERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTG 53 >gi|194015381|ref|ZP_03053997.1| gp49 [Bacillus pumilus ATCC 7061] gi|194012785|gb|EDW22351.1| gp49 [Bacillus pumilus ATCC 7061] Length = 660 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ +S+F+G +E V G N GK++L +A WL + + K Sbjct: 5 IRLAELHLSNFKGVKSFT-LETGGESARVYGDNATGKTTLFDAFMWLLFDKDSQNKKDFE 63 Query: 87 IKKRSIKTP 95 IK S + Sbjct: 64 IKTLSKENK 72 >gi|291543408|emb|CBL16517.1| recF protein [Ruminococcus sp. 18P13] Length = 370 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGD 85 L +E HFR E ++E ++ GQN GK++L EAI WL G + R Sbjct: 1 MHLTGLEAEHFRNL-EHIQLEPDPRYNLIVGQNAQGKTNLLEAI-WLLTGCRSFRGVRER 58 Query: 86 SIKKRSIKTPM 96 + + Sbjct: 59 DLVSFDQEVMR 69 >gi|218245499|ref|YP_002370870.1| SMC domain-containing protein [Cyanothece sp. PCC 8801] gi|218165977|gb|ACK64714.1| SMC domain protein [Cyanothece sp. PCC 8801] Length = 439 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA-------IEWLFYGYTQ 79 K+ +E+ +FRGF + + + ++ T+ G N GK+++ +A + F Sbjct: 1 MKIDQLEVENFRGF-KKEVFKLSEQFTVFIGDNCTGKTAVLDALAIGIGSLFLGFTNVDS 59 Query: 80 RRKHGDSIKKRSI 92 R D + + S Sbjct: 60 RHIKDDEVHRISY 72 >gi|87199175|ref|YP_496432.1| recombination protein F [Novosphingobium aromaticivorans DSM 12444] gi|87134856|gb|ABD25598.1| DNA replication and repair protein RecF [Novosphingobium aromaticivorans DSM 12444] Length = 357 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR ++E ++ G+NG GK+++ EAI L G RR Sbjct: 1 MSLTRLTLRDFRNHAA-TRLEGMRAFNVLVGENGAGKTNVLEAISLLAPGRGLRRAQPAE 59 Query: 87 I 87 + Sbjct: 60 M 60 >gi|302661507|ref|XP_003022421.1| hypothetical protein TRV_03485 [Trichophyton verrucosum HKI 0517] gi|291186364|gb|EFE41803.1| hypothetical protein TRV_03485 [Trichophyton verrucosum HKI 0517] Length = 1126 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 11/59 (18%) Query: 27 FKLLDIEISHFR----------GFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I I F+ + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 1 MFIKQIIIQGFKRAFANGILYNSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 59 >gi|290968151|ref|ZP_06559696.1| putative recombination protein F [Megasphaera genomosp. type_1 str. 28L] gi|290781826|gb|EFD94409.1| putative recombination protein F [Megasphaera genomosp. type_1 str. 28L] Length = 367 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + + +FR + + ++ F + + I G NG GK++L E++ G T R Sbjct: 1 MKITGVRLFNFRNY-KNMELNFHNMIHIFYGNNGQGKTNLLESLYIAGIGKTYRGIADRE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWEQE 66 >gi|288904653|ref|YP_003429874.1| hypothetical protein GALLO_0437 [Streptococcus gallolyticus UCN34] gi|288731378|emb|CBI12929.1| hypothetical protein, phage associated [Streptococcus gallolyticus UCN34] Length = 430 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 10/84 (11%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +EI + + ++ A LT++ G N GK+S+ ++I W G Sbjct: 1 MVTINKLEIENVKRIKAVKIEPSASGLTVIGGNNNQGKTSVLDSIAWALGGN-------- 52 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQL 109 K + K M P K L Sbjct: 53 --KYKPSKAEREGSMVPPTLKVTL 74 >gi|283787600|ref|YP_003367465.1| DNA replication and repair protein [Citrobacter rodentium ICC168] gi|282951054|emb|CBG90732.1| DNA replication and repair protein [Citrobacter rodentium ICC168] Length = 357 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHDQES 67 >gi|221506871|gb|EEE32488.1| DNA repair protein Rad50, putative [Toxoplasma gondii VEG] Length = 1599 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + R F I F LT++ G NG GK+++ E +++ G Sbjct: 4 LERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTG 53 >gi|215487965|ref|YP_002330396.1| recombination and repair protein [Escherichia coli O127:H6 str. E2348/69] gi|312965547|ref|ZP_07779778.1| DNA repair protein RecN [Escherichia coli 2362-75] gi|215266037|emb|CAS10452.1| recombination and repair protein [Escherichia coli O127:H6 str. E2348/69] gi|312289795|gb|EFR17684.1| DNA repair protein RecN [Escherichia coli 2362-75] Length = 553 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK------ 82 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60 Query: 83 HGDSIKKRSIK-TPMPMC 99 D + S+K TP +C Sbjct: 61 RADLCARFSLKDTPAALC 78 >gi|209972944|ref|YP_002300391.1| gp21.9 [Bacillus phage SPO1] gi|209871264|gb|ACI91020.1| gp21.9 [Bacillus phage SPO1] Length = 637 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQN-------GYGKSS-LSEAIEWLFYGY 77 K+ I I +F + F + L ++ G N G GKS+ SEA W YG Sbjct: 1 MKIKQISIENFMSI-KKTSFNFDNRGLVLITGDNQDAFDSNGAGKSTAFSEAPCWALYGQ 59 Query: 78 TQRRKHGDSIKKRSIK 93 T R D + ++ K Sbjct: 60 TIRGYKADKVVNKNTK 75 >gi|114565579|ref|YP_752733.1| DNA repair and genetic recombination protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319237|sp|Q0B0Z2|RECF_SYNWW RecName: Full=DNA replication and repair protein recF gi|114336514|gb|ABI67362.1| DNA replication and repair protein RecF [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 365 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+L +I FR +KIE+ + L I G+N GK+++ EA+ +L G + R Sbjct: 1 MKILKFQIKDFRNL---KKIEYQPSPGLNIFYGENAQGKTNILEALYYLATGNSFRS 54 >gi|296138945|ref|YP_003646188.1| SMC domain protein [Tsukamurella paurometabola DSM 20162] gi|296027079|gb|ADG77849.1| SMC domain protein [Tsukamurella paurometabola DSM 20162] Length = 877 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + FRG E ++I+FA+ +T+++G N GKSS+ EA++ L Sbjct: 1 MRLHRLAVKDFRG-VEQREIDFAETGVTLLHGPNEAGKSSMVEALQLLLD 49 >gi|303284625|ref|XP_003061603.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456933|gb|EEH54233.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1578 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQN---------GYGKSSLSEAIEWLFYG 76 ++E+ F F++ + + +V G N G GK++L A W G Sbjct: 566 IAFKEVEVEGFGAFSDAVTYPLRNRGVCVVVGDNRDDRCSDSNGAGKTTLVMATAWALTG 625 Query: 77 YTQRRKHGDSIK 88 + R G S K Sbjct: 626 NSDVRVEGGSGK 637 >gi|224825444|ref|ZP_03698549.1| SMC domain protein [Lutiella nitroferrum 2002] gi|224602365|gb|EEG08543.1| SMC domain protein [Lutiella nitroferrum 2002] Length = 1140 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GKS+L +AI Y T R Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTQPPFKNNGLFAITGPTGAGKSTLLDAICLALYHETPR 60 >gi|85705683|ref|ZP_01036780.1| recombination protein F [Roseovarius sp. 217] gi|85669673|gb|EAQ24537.1| recombination protein F [Roseovarius sp. 217] Length = 369 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ +SHFR ++ ++G NG GK++L EA+ L G RR Sbjct: 4 LSLSELTLSHFRSHKA-ARLSLDARPVAIHGPNGAGKTNLIEAVSLLSPGRGLRRAAAQD 62 Query: 87 IKKR 90 + +R Sbjct: 63 MARR 66 >gi|330827703|ref|YP_004390655.1| DNA replication and repair protein recF [Aeromonas veronii B565] gi|328802839|gb|AEB48038.1| DNA replication and repair protein recF [Aeromonas veronii B565] Length = 367 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ +++S FR + ++ + L I+ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLVKLQLSDFRNI-QQASLKLSPGLNILVGCNGSGKTSVLEAIHYLGLGRSFRTHLTGR 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 VIRQGER 66 >gi|257871392|ref|ZP_05651045.1| recombination protein F [Enterococcus gallinarum EG2] gi|257805556|gb|EEV34378.1| recombination protein F [Enterococcus gallinarum EG2] Length = 370 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++++++R + E ++ F +L I G+N GK+++ E+I L + R Sbjct: 1 MRLNNLQLNNYRNY-ESLELSFDKNLVIFLGENAQGKTNVLESIYVLAMTKSHRTTSEQE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|190343137|gb|ACE75533.1| HP1079 [Helicobacter pylori] Length = 381 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + Q FA L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKTFKDTQIDGFAK-LNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|145297127|ref|YP_001139968.1| DNA replication and repair protein RecF [Aeromonas salmonicida subsp. salmonicida A449] gi|142849899|gb|ABO88220.1| DNA replication and repair protein RecF [Aeromonas salmonicida subsp. salmonicida A449] Length = 367 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ +++S FR + ++ + L I+ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLVKLQLSDFRNI-QQASLKLSPGLNILVGCNGSGKTSVLEAIHYLGLGRSFRTHLTGR 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 VIRQGER 66 >gi|108248035|emb|CAK32505.1| hypothetical protein [uncultured microorganism] Length = 370 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I +++ E ++EF+ L + G NG GK+++ +AI +L + +S Sbjct: 1 MTLNTATIVNYKNIAE-ARLEFSPKLNCLIGNNGQGKTNVLDAIYYLSMCRSFASTSDNS 59 Query: 87 IKKR-------------SIKTPMPMCMAVPRCKYQL 109 R +TP+ + +A+ R K ++ Sbjct: 60 AVIRHGEPYMMLQGSYTRQETPLEISVALQRGKRKV 95 >gi|53713065|ref|YP_099057.1| hypothetical protein BF1776 [Bacteroides fragilis YCH46] gi|52215930|dbj|BAD48523.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 515 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + +FRG+ + F+ +LT G+N GKS++ EA+ Sbjct: 1 MLIRSVTLKNFRGYRNETTVLFS-NLTTFVGRNDIGKSTILEAL 43 >gi|330971054|gb|EGH71120.1| hypothetical protein PSYAR_11199 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 576 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EI +FR + + + + G GKSS+ +AI+ Sbjct: 3 RVRKLEIQNFRSIRLLTWTP-SPGINCLIGPGDSGKSSILDAIDMCLGARRSVPIGDTDF 61 Query: 88 KKRSIKTPMPMCMAV 102 ++ TP+ + + Sbjct: 62 YGLNVTTPIVINTTI 76 >gi|315654387|ref|ZP_07907295.1| recombination protein F [Mobiluncus curtisii ATCC 51333] gi|315491422|gb|EFU81039.1| recombination protein F [Mobiluncus curtisii ATCC 51333] Length = 413 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ + FR + + F + G NG GK++L EA+ +L + R Sbjct: 1 MFVSDLALDWFRSYR-QVILHFPAGTNVFVGANGQGKTNLLEALNYLAVLASHRIGTDAG 59 Query: 87 IKKRSI 92 + R I Sbjct: 60 LIFREI 65 >gi|315170510|gb|EFU14527.1| DNA replication and repair protein RecF [Enterococcus faecalis TX1342] Length = 200 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L ++ + H+R + E ++F L + G+N GK++L E+I L + R + Sbjct: 1 MRLNELTLQHYRNY-ETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|255025286|ref|ZP_05297272.1| hypothetical protein LmonocytFSL_01352 [Listeria monocytogenes FSL J2-003] Length = 267 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 7/79 (8%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++FK + + +F+ + +++ + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KIVFK--QLTLENFKNHKNLV-VDY-EQVTQISGKNGFGKTSVGEAVTWLLYGT---DLL 54 Query: 84 GDSIKKRSIKTPMPMCMAV 102 G I+ + + T + +++ Sbjct: 55 GTKIEPQPLGTEEEVHVSL 73 >gi|256394639|ref|YP_003116203.1| ATPase AAA [Catenulispora acidiphila DSM 44928] gi|256360865|gb|ACU74362.1| AAA ATPase [Catenulispora acidiphila DSM 44928] Length = 464 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + + RGF ++++ T++ G+NG GK++L AI G T Sbjct: 1 MYLKRVTLKNIRGFHGDRRVDLDLTRPDRSYAGWTVLAGRNGSGKTTLLRAIALAIAGPT 60 Query: 79 QRR 81 Sbjct: 61 AAS 63 >gi|147907130|ref|NP_001083550.1| structural maintenance of chromosomes protein 6 [Xenopus laevis] gi|82186704|sp|Q6P9I7|SMC6_XENLA RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=xSMC6 gi|38173755|gb|AAH60747.1| MGC68930 protein [Xenopus laevis] Length = 1128 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + F ++ V G NG GKS++ A+ G G SIK Sbjct: 87 IESIFLRNFMCHSMLGPFRFGPNVNFVIGNNGSGKSAVLTALIVGLGGKAAITNRGSSIK 146 >gi|24215021|ref|NP_712502.1| DNA repair protein RecN [Leptospira interrogans serovar Lai str. 56601] gi|45657492|ref|YP_001578.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196069|gb|AAN49520.1|AE011402_1 DNA repair protein RecN [Leptospira interrogans serovar Lai str. 56601] gi|45600731|gb|AAS70215.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 568 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 16/76 (21%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I F E I+F +T++ G+ G GKS + +AI L G + Sbjct: 2 LKTLNIRDF-ALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKS---------- 50 Query: 89 KRSIKTPMPMCMAVPR 104 +PM + + PR Sbjct: 51 -----SPMEIRTSAPR 61 >gi|56963962|ref|YP_175693.1| hypothetical protein ABC2197 [Bacillus clausii KSM-K16] gi|56910205|dbj|BAD64732.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 478 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ + + +F+ + ++F L ++ GQ+ GK+++ A+ W + Sbjct: 6 IVSVRLENFQSHLDST-LQFDKGLNVIVGQSDSGKTAILRAVRWALFNQ 53 >gi|134298948|ref|YP_001112444.1| DNA repair protein RecN [Desulfotomaculum reducens MI-1] gi|134051648|gb|ABO49619.1| DNA replication and repair protein RecN [Desulfotomaculum reducens MI-1] Length = 565 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F + +++F+D L +V G+ G GKS L +A++ G Sbjct: 2 LQSLYIKNF-ALIDDVEVDFSDGLNVVTGETGAGKSMLIDALQVALGG 48 >gi|282856106|ref|ZP_06265390.1| putative prophage Lp2 protein 4 [Pyramidobacter piscolens W5455] gi|282586033|gb|EFB91317.1| putative prophage Lp2 protein 4 [Pyramidobacter piscolens W5455] Length = 556 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR F + F ++T + GQNG GKS++ + Y ++ + +S Sbjct: 5 LHKLHIKKFRIFEDKT-FHFGKYVTAIAGQNGVGKSNILGLVANCI-QYKKKGQRKES 60 >gi|301123681|ref|XP_002909567.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4] gi|262100329|gb|EEY58381.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4] Length = 1280 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F + IEF LTI+ G NG GK+++ E ++ G Sbjct: 4 IEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTG 53 >gi|259156490|gb|ACV96434.1| ATP-dependent endonuclease of the OLD family [Vibrio cholerae Mex1] Length = 641 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHGD 85 KL I +S+F+ F +++T + G NG GK++ +A+ + + RR Sbjct: 1 MKLHSIRVSNFQSFGAEPTELTLENITYLIGPNGSGKTAALQALCRLFAFDPSLRRIQRS 60 Query: 86 SIKKRSIKTPMP 97 + P Sbjct: 61 DFHVPHDEQEAP 72 >gi|226323112|ref|ZP_03798630.1| hypothetical protein COPCOM_00884 [Coprococcus comes ATCC 27758] gi|225208302|gb|EEG90656.1| hypothetical protein COPCOM_00884 [Coprococcus comes ATCC 27758] Length = 148 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I I FR F + + F T++ G N GK++L A+ LF H Sbjct: 1 MRIEKIHIKGFRNFEDEEI--FFQPKTLIIGANDVGKTNLLYALRILFDKSISE--HDLD 56 Query: 87 IKKRSI 92 +K Sbjct: 57 LKDSDY 62 >gi|167533572|ref|XP_001748465.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772984|gb|EDQ86629.1| predicted protein [Monosiga brevicollis MX1] Length = 1072 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F ++ + L ++ G NG GKS++ AI G + K Sbjct: 42 IRRIYMENFVTYS-KVEFHVGPGLNVILGPNGSGKSTVICAICLCLAGKPELLGRATHYK 100 Query: 89 K 89 + Sbjct: 101 Q 101 >gi|149191878|ref|ZP_01870112.1| recombination protein F [Vibrio shilonii AK1] gi|148834270|gb|EDL51273.1| recombination protein F [Vibrio shilonii AK1] Length = 360 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR IE + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLTRLIVQQFRNIKACD-IELSTGFNFIIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|332527053|ref|ZP_08403137.1| GTP-binding protein [Rubrivivax benzoatilyticus JA2] gi|332111487|gb|EGJ11470.1| GTP-binding protein [Rubrivivax benzoatilyticus JA2] Length = 584 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++ R F E +I +FA L + N GKS+L AI F+ + D Sbjct: 1 MKLTRLRVAELRRFREPFEISDFAPGLNVFAAPNESGKSTLVRAIRAAFFERHRSSGAED 60 >gi|157121047|ref|XP_001653748.1| structural maintenance of chromosomes smc4 [Aedes aegypti] gi|108882994|gb|EAT47219.1| structural maintenance of chromosomes smc4 [Aedes aegypti] Length = 1347 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 71 ITHISNYNFKSYAGHVMLGPFHQRFSAIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 129 >gi|328852754|gb|EGG01897.1| hypothetical protein MELLADRAFT_49933 [Melampsora larici-populina 98AG31] Length = 1303 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I R F Q ++F LT++ G NG GK+++ E ++++ G G Sbjct: 4 IDKIAIRGIRSFDHEQMAVMQFYSPLTVIVGHNGSGKTTIIECLKYITTGDLPPNAKG 61 >gi|325288506|ref|YP_004264687.1| SMC domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324963907|gb|ADY54686.1| SMC domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 430 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + ++ A+ LTIV G+N GK+S+ ++I W G R Sbjct: 3 IKINKLEIENVKRVKAVKIEPTANGLTIVGGKNNQGKTSVLDSIAWALGGEKYR 56 >gi|253744759|gb|EET00911.1| SMC1 beta-like protein [Giardia intestinalis ATCC 50581] Length = 1342 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + +F+ F I L+ + G NG GK+++ +AI + Sbjct: 5 LSGVRMFNFKTFIGEHSITDLPRLSFIVGPNGSGKTNIYDAILFA 49 >gi|253582582|ref|ZP_04859803.1| DNA replication and repair protein recF [Fusobacterium varium ATCC 27725] gi|251835452|gb|EES63992.1| DNA replication and repair protein recF [Fusobacterium varium ATCC 27725] Length = 375 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L+I +FR + ++F + + G+NG GK+SL EA+ + G + R Sbjct: 1 MEILEINYVNFRNLQDGN-VKFFPKMNLFYGKNGQGKTSLLEALYFNSTGKSFRTTKSSE 59 Query: 87 IKKRSIK 93 + K K Sbjct: 60 MMKYGYK 66 >gi|114568557|ref|YP_755237.1| DNA replication and repair protein RecF [Maricaulis maris MCS10] gi|114339019|gb|ABI64299.1| DNA replication and repair protein RecF [Maricaulis maris MCS10] Length = 384 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + +++FR + ++ +E + + G+NG GK++L EAI +L G R D + RS Sbjct: 17 LRLTNFRSYPDLD-LELSPAPVALFGENGAGKTNLLEAISFLAPGRGMRSAGADGVATRS 75 >gi|332665782|ref|YP_004448570.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334596|gb|AEE51697.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 550 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTE--IQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ +E+ +F+ FT+ I+ I L ++ G NG GKSS+ +A ++L Sbjct: 1 MRITKLELKNFKRFTDLRIEHIPPQAKLVLLIGSNGSGKSSVFDAFQYL 49 >gi|327398177|ref|YP_004339046.1| SMC domain-containing protein [Hippea maritima DSM 10411] gi|327180806|gb|AEA32987.1| SMC domain protein [Hippea maritima DSM 10411] Length = 326 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I I++FR F + +++F D + I+ G+NG GK++L EA+ G+ + + Sbjct: 1 MFIKNIIITNFRNFN-LLEVKF-DKINIIKGKNGTGKTNLIEAVYLTLNGHPFKN----N 54 Query: 87 IKKRSIKTPMP 97 +K + P Sbjct: 55 LKVLKKELEKP 65 >gi|325969198|ref|YP_004245390.1| hypothetical protein VMUT_1684 [Vulcanisaeta moutnovskia 768-28] gi|323708401|gb|ADY01888.1| hypothetical protein VMUT_1684 [Vulcanisaeta moutnovskia 768-28] Length = 354 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I F+G +E I F+ TI+ G++G GK+SL EA+ L Sbjct: 5 IKGFKGLSEELTINFS-GNTIIVGRSGSGKTSLMEALALLM 44 >gi|221487186|gb|EEE25432.1| DNA repair protein Rad50, putative [Toxoplasma gondii GT1] Length = 1599 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + R F I F LT++ G NG GK+++ E +++ G Sbjct: 4 LERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTG 53 >gi|88799398|ref|ZP_01114976.1| putative GTP-binding protein [Reinekea sp. MED297] gi|88777937|gb|EAR09134.1| putative GTP-binding protein [Reinekea sp. MED297] Length = 883 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + I R F E +E A+ L + G N GKS+L AI F+ R + Sbjct: 1 MKLTRVSIDSVRQFREPLTLENLAEGLNLFVGPNESGKSTLVSAIRAAFFE----RYKSN 56 Query: 86 SIKKRS 91 S+K Sbjct: 57 SVKDLQ 62 >gi|229000747|ref|ZP_04160257.1| AAA ATPase [Bacillus mycoides Rock3-17] gi|228759007|gb|EEM08043.1| AAA ATPase [Bacillus mycoides Rock3-17] Length = 437 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-------GYTQRR 81 + D+++ + GF E I F+D T++ G NG GK+++ + + G R Sbjct: 3 IHDLKLENSHGFEERY-ITFSDKFTVLVGDNGTGKTAVLDGLAVALGAFLSGLDGVHSRH 61 Query: 82 KHGDSIKK 89 D I + Sbjct: 62 IRRDEIHR 69 >gi|158313824|ref|YP_001506332.1| hypothetical protein Franean1_1989 [Frankia sp. EAN1pec] gi|158109229|gb|ABW11426.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length = 1348 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 ++ + + + F + +IEF LT+V G N GKS+ +A+ W F G Sbjct: 1 MRVRALSLDRYGAFEDR-RIEFGRGLTVVVGANEAGKSTTLDALSDLLWTFRGT 53 >gi|149375633|ref|ZP_01893402.1| recombination protein F [Marinobacter algicola DG893] gi|149360035|gb|EDM48490.1| recombination protein F [Marinobacter algicola DG893] Length = 379 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ ++ +FR + + F+ + ++ G NG GK+S+ EAI +L G + R + Sbjct: 1 MALVKLQSENFRNLS-PAPVSFSPSINLLYGANGSGKTSVLEAIGYLGLGRSFRVSRHQA 59 Query: 87 IKKRSI 92 + Sbjct: 60 VVSHGQ 65 >gi|294676512|ref|YP_003577127.1| SMC protein, N-terminal domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294475332|gb|ADE84720.1| SMC protein, N-terminal domain protein [Rhodobacter capsulatus SB 1003] Length = 550 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 ++ + I FR +++ +F + T++ GQNG GKS+L EAI Sbjct: 1 MRIDRVYIDGFRNLQDVEA-DFDEGCLTTVIIGQNGAGKSNLIEAI 45 >gi|292490173|ref|YP_003525612.1| DNA replication and repair protein RecF [Nitrosococcus halophilus Nc4] gi|291578768|gb|ADE13225.1| DNA replication and repair protein RecF [Nitrosococcus halophilus Nc4] Length = 362 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++I +FR + IEF A L I G NG GK+SL EAI L G + R Sbjct: 1 MHIAHLDIRNFRNL---EHIEFYPAKGLNIFTGANGSGKTSLLEAIYLLGLGRSFRSSQL 57 Query: 85 DSIKKRSIKTPM 96 S+ + ++K+ Sbjct: 58 ASVVRGNMKSLR 69 >gi|190341571|gb|ACE74862.1| RecN [Enterobacter sp. OD1121_04] Length = 553 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 K 89 + Sbjct: 57 R 57 >gi|190341569|gb|ACE74861.1| RecN [Enterobacter sp. KM877_04] Length = 553 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 K 89 + Sbjct: 57 R 57 >gi|190341545|gb|ACE74849.1| RecN [Enterobacter ludwigii] Length = 553 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 K 89 + Sbjct: 57 R 57 >gi|190341543|gb|ACE74848.1| RecN [Enterobacter kobei] Length = 553 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 K 89 + Sbjct: 57 R 57 >gi|197302272|ref|ZP_03167331.1| hypothetical protein RUMLAC_00999 [Ruminococcus lactaris ATCC 29176] gi|197298703|gb|EDY33244.1| hypothetical protein RUMLAC_00999 [Ruminococcus lactaris ATCC 29176] Length = 370 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + ++ + F I+ G N GK+++ EA+ + R Sbjct: 10 MVIRSLRLKNYRNY-DLLDMSFDPKTNILYGDNAQGKTNILEALYLSGTTKSHRGTKDRD 68 Query: 87 IKKRSIKTPMPMCMAVPR 104 + + + M V + Sbjct: 69 MIQFGHD-EAHLEMVVEK 85 >gi|168335261|ref|ZP_02693362.1| DNA replication and repair protein RecF [Epulopiscium sp. 'N.t. morphotype B'] Length = 359 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +++FR + + + + + I G N GK+++ EAI + R Sbjct: 1 MYISTLSLTNFRNY-QHLSLSLSKGINIFFGDNAQGKTNVLEAIYLCATARSHRTTSEKE 59 Query: 87 IKKRSIK 93 + K + Sbjct: 60 VIKWDSE 66 >gi|62185059|ref|YP_219844.1| recombination protein F [Chlamydophila abortus S26/3] gi|81312775|sp|Q5L648|RECF_CHLAB RecName: Full=DNA replication and repair protein recF gi|62148126|emb|CAH63883.1| DNA replication and repair protein [Chlamydophila abortus S26/3] Length = 367 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + +FR + E + + + ++ + G+N GK++L EA+ L G + R H Sbjct: 1 MNILSLRLKNFRNYKEAE-VSLSPNINYIFGENAQGKTNLIEALYVLSLGRSFRTSH 56 >gi|332163519|ref|YP_004300096.1| recombination protein F [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667749|gb|ADZ44393.1| recombination protein F [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861743|emb|CBX71917.1| DNA replication and repair protein recF [Yersinia enterocolitica W22703] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|318608023|emb|CBY29521.1| DNA recombination and repair protein RecF [Yersinia enterocolitica subsp. palearctica Y11] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|269836261|ref|YP_003318489.1| hypothetical protein Sthe_0228 [Sphaerobacter thermophilus DSM 20745] gi|269785524|gb|ACZ37667.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 636 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L + +FR + +E +T + G+N GKS+L EA+ Sbjct: 1 MRLTSFRVQYFRNIIDSTTVEVQPDITCLVGKNESGKSALLEAL 44 >gi|257440764|ref|ZP_05616519.1| putative ATP binding protein [Faecalibacterium prausnitzii A2-165] gi|257196738|gb|EEU95022.1| putative ATP binding protein [Faecalibacterium prausnitzii A2-165] Length = 417 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + + F+G+ E + + T++ G NG GKS++ AI +L + R + Sbjct: 1 MKLTSLYVHDFKGYRE-HQFDLLGKSTVLFGVNGAGKSTVLTAINYLMWPVLNRLSNTQG 59 Query: 87 IKKRSIKTP 95 I RS+ T Sbjct: 60 IAFRSLNTE 68 >gi|238759586|ref|ZP_04620748.1| DNA replication and repair protein recF [Yersinia aldovae ATCC 35236] gi|238702245|gb|EEP94800.1| DNA replication and repair protein recF [Yersinia aldovae ATCC 35236] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|238765486|ref|ZP_04626405.1| DNA replication and repair protein recF [Yersinia kristensenii ATCC 33638] gi|238696310|gb|EEP89108.1| DNA replication and repair protein recF [Yersinia kristensenii ATCC 33638] Length = 323 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|227832862|ref|YP_002834569.1| hypothetical protein cauri_1034 [Corynebacterium aurimucosum ATCC 700975] gi|262182650|ref|ZP_06042071.1| hypothetical protein CaurA7_01545 [Corynebacterium aurimucosum ATCC 700975] gi|227453878|gb|ACP32631.1| hypothetical protein cauri_1034 [Corynebacterium aurimucosum ATCC 700975] Length = 861 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L +E+++ RG ++ + + + ++ G N GKS+L EAI+++ Sbjct: 1 MMQLHSVELNNVRGVEHLEVKDLPETGVVVIGGPNEAGKSTLVEAIDFVLTE 52 >gi|149200628|ref|ZP_01877631.1| recombination protein F [Lentisphaera araneosa HTCC2155] gi|149136277|gb|EDM24727.1| recombination protein F [Lentisphaera araneosa HTCC2155] Length = 364 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I++ +FR + E++ ++ +++ G NG GK++ EA+ +L + R H +K Sbjct: 4 ISRIQLKNFRNYPELE-LKLEPGISVFRGLNGQGKTAFLEALGFLSLLRSIRSSHTRHLK 62 Query: 89 KRSIK 93 K Sbjct: 63 KWESD 67 >gi|126666549|ref|ZP_01737527.1| predicted ATPase [Marinobacter sp. ELB17] gi|126628937|gb|EAZ99556.1| predicted ATPase [Marinobacter sp. ELB17] Length = 387 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I +++F + +IE L I+ G NG GKS+L EAIE Sbjct: 1 MLIKSIRLTNFLSYGSSADEIEL-RSLNIIIGPNGSGKSNLIEAIE 45 >gi|123444340|ref|YP_001008305.1| recombination protein F [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166221878|sp|A1JT78|RECF_YERE8 RecName: Full=DNA replication and repair protein recF gi|122091301|emb|CAL14187.1| DNA metabolism protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|163940132|ref|YP_001645016.1| SMC domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163862329|gb|ABY43388.1| SMC domain protein [Bacillus weihenstephanensis KBAB4] Length = 1029 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + Sbjct: 1 MRPIQLIMTAFGPYKQKEIIDFKDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE 60 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 D+ RS + +V +QLK Sbjct: 61 RSDTNMLRSQFADDDVYTSV-ELTFQLK 87 >gi|238787826|ref|ZP_04631623.1| DNA replication and repair protein recF [Yersinia frederiksenii ATCC 33641] gi|238724169|gb|EEQ15812.1| DNA replication and repair protein recF [Yersinia frederiksenii ATCC 33641] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|238797843|ref|ZP_04641335.1| DNA replication and repair protein recF [Yersinia mollaretii ATCC 43969] gi|238718259|gb|EEQ10083.1| DNA replication and repair protein recF [Yersinia mollaretii ATCC 43969] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|238783050|ref|ZP_04627077.1| DNA replication and repair protein recF [Yersinia bercovieri ATCC 43970] gi|238716051|gb|EEQ08036.1| DNA replication and repair protein recF [Yersinia bercovieri ATCC 43970] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|323357954|ref|YP_004224350.1| recombinational DNA repair ATPase [Microbacterium testaceum StLB037] gi|323274325|dbj|BAJ74470.1| recombinational DNA repair ATPase [Microbacterium testaceum StLB037] Length = 383 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + FR + E + + + G+NG GK++L EA+ +L + R + Sbjct: 3 VEQLGLRDFRNYAE-VDVSLSTGANVFVGRNGQGKTNLVEAVAYLATLGSHRVSSDAPMV 61 Query: 89 KRSIK 93 K Sbjct: 62 KDGTD 66 >gi|218132764|ref|ZP_03461568.1| hypothetical protein BACPEC_00625 [Bacteroides pectinophilus ATCC 43243] gi|217992490|gb|EEC58493.1| hypothetical protein BACPEC_00625 [Bacteroides pectinophilus ATCC 43243] Length = 622 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ + I +F+ +++ + D L I+ G+N GKS++ +A+ + Y+ Sbjct: 1 MRIGYLHIKNFKSIKDLELTDIDDAL-ILVGRNNSGKSNVLDAVRAVAGDYSV 52 >gi|237843275|ref|XP_002370935.1| SMC protein, putative [Toxoplasma gondii ME49] gi|211968599|gb|EEB03795.1| SMC protein, putative [Toxoplasma gondii ME49] gi|221481866|gb|EEE20236.1| SMC protein, putative [Toxoplasma gondii GT1] gi|221502364|gb|EEE28097.1| SMC protein, putative [Toxoplasma gondii VEG] Length = 1418 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHGDS 86 +LL + I ++ +T ++ F + ++ NG GKSSL A+ + Y + + G Sbjct: 56 QLLQLRIENWMAYTGPVEVNFLTGINLLAAPNGAGKSSLLCAMAFGLGYDVSHISRRGSR 115 Query: 87 IKK 89 ++ Sbjct: 116 LRD 118 >gi|83643779|ref|YP_432214.1| DNA repair ATPase [Hahella chejuensis KCTC 2396] gi|83631822|gb|ABC27789.1| ATPase involved in DNA repair [Hahella chejuensis KCTC 2396] Length = 1229 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNLNSLKGEWKVDFRADPFHSNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|148259805|ref|YP_001233932.1| ATP-dependent OLD family endonuclease [Acidiphilium cryptum JF-5] gi|146401486|gb|ABQ30013.1| ATP-dependent endonuclease of the OLD family-like protein [Acidiphilium cryptum JF-5] Length = 647 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I +FR + IE + T++ G N GK+++ +A+ + +R G Sbjct: 9 MRITRLHIENFRSVRNLD-IELGE-TTVLIGPNNAGKTAILDAVRIVLTRRWGQRGTG 64 >gi|47097498|ref|ZP_00235040.1| ATPase involved in DNA repair, putative [Listeria monocytogenes str. 1/2a F6854] gi|254854551|ref|ZP_05243899.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254900909|ref|ZP_05260833.1| hypothetical protein LmonJ_13881 [Listeria monocytogenes J0161] gi|254913877|ref|ZP_05263889.1| ATPase [Listeria monocytogenes J2818] gi|254938266|ref|ZP_05269963.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47014139|gb|EAL05130.1| ATPase involved in DNA repair, putative [Listeria monocytogenes str. 1/2a F6854] gi|258607950|gb|EEW20558.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258610876|gb|EEW23484.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293591893|gb|EFG00228.1| ATPase [Listeria monocytogenes J2818] Length = 503 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 7/79 (8%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K++FK + + +F+ + +++ + +T ++G+NG+GK+S+ EA+ WL YG Sbjct: 2 KIVFK--QLTLENFKNHKNLV-VDY-EQVTQISGKNGFGKTSIGEAVTWLLYGT---DLL 54 Query: 84 GDSIKKRSIKTPMPMCMAV 102 G I+ + + T + +++ Sbjct: 55 GTKIEPQPLGTEEEVHVSL 73 >gi|319795357|ref|YP_004156997.1| hypothetical protein Varpa_4724 [Variovorax paradoxus EPS] gi|315597820|gb|ADU38886.1| hypothetical protein Varpa_4724 [Variovorax paradoxus EPS] Length = 487 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L +I++FR + I+ + +T + G+N GKS+L A+ Sbjct: 1 MRLASFQITNFRSINDSGPID-STQITAILGRNDSGKSNLLRAL 43 >gi|260596764|ref|YP_003209335.1| exonuclease subunit SbcC [Cronobacter turicensis z3032] gi|260215941|emb|CBA28543.1| Nuclease sbcCD subunit C [Cronobacter turicensis z3032] Length = 1049 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 >gi|156935056|ref|YP_001438972.1| exonuclease subunit SbcC [Cronobacter sakazakii ATCC BAA-894] gi|156533310|gb|ABU78136.1| hypothetical protein ESA_02907 [Cronobacter sakazakii ATCC BAA-894] Length = 1049 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 >gi|150021561|ref|YP_001306915.1| hypothetical protein Tmel_1688 [Thermosipho melanesiensis BI429] gi|149794082|gb|ABR31530.1| hypothetical protein Tmel_1688 [Thermosipho melanesiensis BI429] Length = 427 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ +++++F+ + + IEF+ + ++ G GKS+L E+I W YG Sbjct: 1 MRIEKVKLNNFKQYKNFE-IEFSKNDNQDNDFHVIVAIQGVGKSNLLESINWCLYG 55 >gi|321257907|ref|XP_003193746.1| DNA repair-related protein [Cryptococcus gattii WM276] gi|317460216|gb|ADV21959.1| DNA repair-related protein, putative [Cryptococcus gattii WM276] Length = 1124 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F + ++F + V G NG GKS++ AI G G +K Sbjct: 99 IKSISLIDFMCHRHLT-VDFGPRMNFVVGHNGSGKSAVLTAIAVALGGKANLTGRGTGLK 157 Query: 89 KR 90 Sbjct: 158 DL 159 >gi|332288917|ref|YP_004419769.1| recombination protein F [Gallibacterium anatis UMN179] gi|330431813|gb|AEC16872.1| recombination protein F [Gallibacterium anatis UMN179] Length = 359 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I HFR + + + G NG GK+SL EAI +L +G + + Sbjct: 1 MALSQLNIQHFRNLKAVN-LALNSGFNFLIGHNGSGKTSLLEAIYFLGHGRSFKS 54 >gi|290960938|ref|YP_003492120.1| hypothetical protein SCAB_65791 [Streptomyces scabiei 87.22] gi|260650464|emb|CBG73580.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 403 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 9/76 (11%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------FYGYTQR 80 ++L + + +FR T+ K+ LT++ G N GKS++ A+E+L + Sbjct: 4 RILGLTVRNFRTLTD-TKLPLGP-LTVMVGPNAAGKSNVLHALEFLGDVTRKGIEPALEE 61 Query: 81 RKHGDSIKKRSIKTPM 96 R D++ R ++PM Sbjct: 62 RGGFDALAFRGGRSPM 77 >gi|259485548|tpe|CBF82662.1| TPA: DNA repair protein Rad18, putative (AFU_orthologue; AFUA_3G05440) [Aspergillus nidulans FGSC A4] Length = 1146 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++E + + G+NG GKS++ AI G G S+K Sbjct: 106 LERVECYNFMCH-DHFQVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASTTNRGQSLK 164 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 165 -SFIKEGKESATIIVRIKNQ 183 >gi|225020942|ref|ZP_03710134.1| hypothetical protein CORMATOL_00953 [Corynebacterium matruchotii ATCC 33806] gi|224946314|gb|EEG27523.1| hypothetical protein CORMATOL_00953 [Corynebacterium matruchotii ATCC 33806] Length = 538 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I I +R E E + + I+ G N GKS+L EAI G Sbjct: 1 MMITKIHIQGYRKLKEFL-FEPNNGMNIIVGGNDAGKSTLLEAISLCLTG 49 >gi|222622903|gb|EEE57035.1| hypothetical protein OsJ_06817 [Oryza sativa Japonica Group] Length = 1614 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|204928659|ref|ZP_03219858.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322092|gb|EDZ07290.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|168235475|ref|ZP_02660533.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737823|ref|YP_002116780.1| recombination protein F [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226737833|sp|B4TN05|RECF_SALSV RecName: Full=DNA replication and repair protein recF gi|194713325|gb|ACF92546.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291440|gb|EDY30792.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|194472063|ref|ZP_03078047.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458427|gb|EDX47266.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|167548875|ref|ZP_02342634.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325712|gb|EDZ13551.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|161616953|ref|YP_001590918.1| recombination protein F [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168464834|ref|ZP_02698726.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|189039639|sp|A9MX74|RECF_SALPB RecName: Full=DNA replication and repair protein recF gi|161366317|gb|ABX70085.1| hypothetical protein SPAB_04774 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|195632488|gb|EDX50972.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|62182324|ref|YP_218741.1| recombination protein F [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168233390|ref|ZP_02658448.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168260380|ref|ZP_02682353.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197251211|ref|YP_002148774.1| recombination protein F [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263684|ref|ZP_03163758.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244935|ref|YP_002217786.1| recombination protein F [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354577|ref|YP_002228378.1| recombination protein F [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859062|ref|YP_002245713.1| recombination protein F [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224585635|ref|YP_002639434.1| recombination protein F [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913089|ref|ZP_04656926.1| recombination protein F [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|75505469|sp|Q57I02|RECF_SALCH RecName: Full=DNA replication and repair protein recF gi|226737826|sp|B5EYB2|RECF_SALA4 RecName: Full=DNA replication and repair protein recF gi|226737827|sp|B5FN08|RECF_SALDC RecName: Full=DNA replication and repair protein recF gi|226737828|sp|B5QUP8|RECF_SALEP RecName: Full=DNA replication and repair protein recF gi|226737829|sp|B5RFY9|RECF_SALG2 RecName: Full=DNA replication and repair protein recF gi|254790486|sp|C0Q2K7|RECF_SALPC RecName: Full=DNA replication and repair protein recF gi|62129957|gb|AAX67660.1| gap repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197214914|gb|ACH52311.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241939|gb|EDY24559.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939451|gb|ACH76784.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274358|emb|CAR39383.1| recF protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205332587|gb|EDZ19351.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205350391|gb|EDZ37022.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710865|emb|CAR35229.1| recF protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470163|gb|ACN47993.1| recombination protein F [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716815|gb|EFZ08386.1| recombination protein F [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326625572|gb|EGE31917.1| recombination protein F [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629713|gb|EGE36056.1| recombination protein F [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|56415709|ref|YP_152784.1| recombination protein F [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364637|ref|YP_002144274.1| recombination protein F [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81678054|sp|Q5PKU8|RECF_SALPA RecName: Full=DNA replication and repair protein recF gi|226737832|sp|B5BIL2|RECF_SALPK RecName: Full=DNA replication and repair protein recF gi|56129966|gb|AAV79472.1| recF protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096114|emb|CAR61710.1| recF protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|16767121|ref|NP_462736.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992429|ref|ZP_02573527.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242055|ref|ZP_02666987.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445873|ref|YP_002043086.1| recombination protein F [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450242|ref|YP_002047869.1| recombination protein F [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200387747|ref|ZP_03214359.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|20141706|sp|P24900|RECF_SALTY RecName: Full=DNA replication and repair protein recF gi|226737830|sp|B4TAU7|RECF_SALHS RecName: Full=DNA replication and repair protein recF gi|226737831|sp|B4SYA6|RECF_SALNS RecName: Full=DNA replication and repair protein recF gi|16422409|gb|AAL22695.1| gap repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194404536|gb|ACF64758.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408546|gb|ACF68765.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199604845|gb|EDZ03390.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205329422|gb|EDZ16186.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338680|gb|EDZ25444.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261248977|emb|CBG26834.1| recF protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996121|gb|ACY91006.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160369|emb|CBW19894.1| recF protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914966|dbj|BAJ38940.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225554|gb|EFX50609.1| DNA recombination and repair protein RecF [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132197|gb|ADX19627.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990686|gb|AEF09669.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 357 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|159114150|ref|XP_001707300.1| RAD50 DNA repair protein, putative [Giardia lamblia ATCC 50803] gi|33667838|gb|AAQ24519.1| Rad50 [Giardia intestinalis] gi|157435404|gb|EDO79626.1| RAD50 DNA repair protein, putative [Giardia lamblia ATCC 50803] Length = 1387 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSS 65 ++ L + + + R + + I F+ +LTI+ G NG GKS+ Sbjct: 1 MYYLDQLTLKNIRSYRDQLSTIVFSPNLTIITGHNGAGKST 41 >gi|149174748|ref|ZP_01853373.1| hypothetical protein PM8797T_26470 [Planctomyces maris DSM 8797] gi|148846442|gb|EDL60780.1| hypothetical protein PM8797T_26470 [Planctomyces maris DSM 8797] Length = 454 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +F + I+ + LT++ G N GKS+ A++ L GD + Sbjct: 9 LKRITLHNFMSHS-HTVIDLSPGLTVLTGPNNCGKSAFVSALQIL-----AENTTGDFMV 62 Query: 89 KRSIK 93 + K Sbjct: 63 RHGEK 67 >gi|152994046|ref|YP_001338881.1| recombination protein F [Marinomonas sp. MWYL1] gi|189039628|sp|A6VR67|RECF_MARMS RecName: Full=DNA replication and repair protein recF gi|150834970|gb|ABR68946.1| DNA replication and repair protein RecF [Marinomonas sp. MWYL1] Length = 368 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ ++ISH R + + E + + ++ G+NG GK+S+ EAI L +G + R Sbjct: 1 MPLVRLDISHVRNLSS-VRFEPSPQVNVIVGKNGSGKTSVLEAIHLLSFGRSFRS 54 >gi|331084044|ref|ZP_08333151.1| hypothetical protein HMPREF0992_02075 [Lachnospiraceae bacterium 6_1_63FAA] gi|330402406|gb|EGG81976.1| hypothetical protein HMPREF0992_02075 [Lachnospiraceae bacterium 6_1_63FAA] Length = 1081 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + +++ F E+Q+I+F L + G G GK+S+ + + YG T R Sbjct: 1 MKPISMKMKGLNSFLEVQEIDFEKLTSQGLFGIFGPTGSGKTSILDGMTLALYGTTSRN 59 >gi|309776878|ref|ZP_07671848.1| exonuclease SbcC subfamily [Erysipelotrichaceae bacterium 3_1_53] gi|308915289|gb|EFP61059.1| exonuclease SbcC subfamily [Erysipelotrichaceae bacterium 3_1_53] Length = 1008 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ F + + Q I F HL ++ G+ G GK+ L +A+ + YG + + Sbjct: 1 MRPEILKLQAFGPYVKEQCINFHVFDKRHLFLIQGETGSGKTMLLDAMTYALYGKSSGSQ 60 Query: 83 HGDSIKKRS 91 D + RS Sbjct: 61 REDFLSMRS 69 >gi|42527129|ref|NP_972227.1| hypothetical protein TDE1621 [Treponema denticola ATCC 35405] gi|41817553|gb|AAS12138.1| conserved hypothetical protein [Treponema denticola ATCC 35405] Length = 596 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +I++ +FR + + F + ++ G+N GK+++ +A++ + + Sbjct: 1 MYLSEIKLWNFRKYGRNDFDINVPHLVVPFHQGMNVLVGENDSGKTAIIDAVKLVLKTQS 60 Query: 79 QR--RKHGDSIKKRSIKTPMPM 98 R D S + + + Sbjct: 61 YEWLRVTDDDFYNESDRLRIEL 82 >gi|329925052|ref|ZP_08279996.1| DNA replication and repair protein RecF [Paenibacillus sp. HGF5] gi|328940171|gb|EGG36503.1| DNA replication and repair protein RecF [Paenibacillus sp. HGF5] Length = 370 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + H+R + ++Q F D + ++ G+N GK++L EA+ L + R Sbjct: 1 MFVKNVSLQHYRNYEKLQLEAFGD-VNLIIGRNAQGKTNLMEALFVLALTKSHRTSKD 57 >gi|317492789|ref|ZP_07951213.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918911|gb|EFV40246.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1228 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK++L +A+ Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTREDFANNGLFAITGPTGAGKTTLLDALCLALYHQTPR 60 >gi|315644303|ref|ZP_07897473.1| DNA replication and repair protein RecF [Paenibacillus vortex V453] gi|315280678|gb|EFU43967.1| DNA replication and repair protein RecF [Paenibacillus vortex V453] Length = 370 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + H+R + ++Q F D + ++ G+N GK++L EA+ L + R Sbjct: 1 MFVKNVSLQHYRNYEKLQLEAFGD-VNLIIGRNAQGKTNLMEALFVLALTKSHRTSKD 57 >gi|255348438|ref|ZP_05380445.1| recombination protein F [Chlamydia trachomatis 70] gi|255502980|ref|ZP_05381370.1| recombination protein F [Chlamydia trachomatis 70s] gi|255506650|ref|ZP_05382289.1| recombination protein F [Chlamydia trachomatis D(s)2923] gi|296438380|gb|ADH20533.1| recombination protein F [Chlamydia trachomatis E/11023] Length = 365 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 ++L + + FR +T++ ++E + + G N GK++L EA+ L G + R D Sbjct: 1 MRVLSLFLKDFRNYTDL-RLELGPEMNSIFGLNAQGKTNLLEALYILSLGRSFRTSRLTD 59 Query: 86 SIKK 89 +I+ Sbjct: 60 AIRF 63 >gi|256810946|ref|YP_003128315.1| SMC domain protein [Methanocaldococcus fervens AG86] gi|256794146|gb|ACV24815.1| SMC domain protein [Methanocaldococcus fervens AG86] Length = 642 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +FR + +I F D +T++ G+N GK+S+ +A++ +F T Sbjct: 2 IKKLMVENFRSL-KNVEISFEDDITVLVGENDSGKTSIVDALKIMFDNKTVE 52 >gi|218673272|ref|ZP_03522941.1| hypothetical protein RetlG_17611 [Rhizobium etli GR56] Length = 524 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 3/46 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 ++ ++I F+ T+I I+F + T++ G+NG GKS++ EA+ Sbjct: 1 MRVDSLKIRSFKNLTDIT-IDFDEGELSTVIIGENGTGKSNVIEAL 45 >gi|261403880|ref|YP_003240121.1| DNA replication and repair protein RecF [Paenibacillus sp. Y412MC10] gi|261280343|gb|ACX62314.1| DNA replication and repair protein RecF [Paenibacillus sp. Y412MC10] Length = 370 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + H+R + ++Q F D + ++ G+N GK++L EA+ L + R Sbjct: 1 MFVKNVSLQHYRNYEKLQLEAFGD-VNLIIGRNAQGKTNLMEALFVLALTKSHRTSKD 57 >gi|76788787|ref|YP_327873.1| recombination protein F [Chlamydia trachomatis A/HAR-13] gi|237804423|ref|YP_002888577.1| recombination protein F [Chlamydia trachomatis B/TZ1A828/OT] gi|97180699|sp|Q3KMU7|RECF_CHLTA RecName: Full=DNA replication and repair protein recF gi|76167317|gb|AAX50325.1| RecF [Chlamydia trachomatis A/HAR-13] gi|231272723|emb|CAX09627.1| DNA replication and repair protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 365 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 ++L + + FR +T++ ++E + + G N GK++L EA+ L G + R D Sbjct: 1 MRVLSLFLKDFRNYTDL-RLELGPEMNSIFGLNAQGKTNLLEALYILSLGRSFRTSRLTD 59 Query: 86 SIKK 89 +I+ Sbjct: 60 AIRF 63 >gi|15604793|ref|NP_219577.1| recombination protein F [Chlamydia trachomatis D/UW-3/CX] gi|166154295|ref|YP_001654413.1| recombination protein F [Chlamydia trachomatis 434/Bu] gi|166155170|ref|YP_001653425.1| recombination protein F [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255310877|ref|ZP_05353447.1| recombination protein F [Chlamydia trachomatis 6276] gi|255317177|ref|ZP_05358423.1| recombination protein F [Chlamydia trachomatis 6276s] gi|301335547|ref|ZP_07223791.1| recombination protein F [Chlamydia trachomatis L2tet1] gi|13959461|sp|O84077|RECF_CHLTR RecName: Full=DNA replication and repair protein recF gi|226737775|sp|B0B9I2|RECF_CHLT2 RecName: Full=DNA replication and repair protein recF gi|226737777|sp|B0BB61|RECF_CHLTB RecName: Full=DNA replication and repair protein recF gi|3328469|gb|AAC67665.1| ABC superfamily ATPase [Chlamydia trachomatis D/UW-3/CX] gi|165930283|emb|CAP03769.1| DNA replication and repair protein [Chlamydia trachomatis 434/Bu] gi|165931158|emb|CAP06723.1| DNA replication and repair protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|296435592|gb|ADH17766.1| recombination protein F [Chlamydia trachomatis G/9768] gi|296436516|gb|ADH18686.1| recombination protein F [Chlamydia trachomatis G/11222] gi|296437452|gb|ADH19613.1| recombination protein F [Chlamydia trachomatis G/11074] gi|297139951|gb|ADH96709.1| recombination protein F [Chlamydia trachomatis G/9301] gi|297748203|gb|ADI50749.1| RecF [Chlamydia trachomatis D-EC] gi|297749083|gb|ADI51761.1| RecF [Chlamydia trachomatis D-LC] Length = 365 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GD 85 ++L + + FR +T++ ++E + + G N GK++L EA+ L G + R D Sbjct: 1 MRVLSLFLKDFRNYTDL-RLELGPEMNSIFGLNAQGKTNLLEALYILSLGRSFRTSRLTD 59 Query: 86 SIKK 89 +I+ Sbjct: 60 AIRF 63 >gi|134110720|ref|XP_775824.1| hypothetical protein CNBD2340 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258490|gb|EAL21177.1| hypothetical protein CNBD2340 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1156 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F + ++F + V G NG GKS++ AI G G +K Sbjct: 99 IKSISLIDFMCHRHLT-VDFGPRMNFVVGHNGSGKSAVLTAIAVALGGKANLTGRGTGLK 157 Query: 89 KR 90 Sbjct: 158 DL 159 >gi|297184290|gb|ADI20407.1| recombinational DNA repair ATPase (recf pathway) [uncultured alpha proteobacterium EB080_L43F08] Length = 364 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ISHFR + ++ + + + G NG GK+++ EA+ L G RR D Sbjct: 4 IAVTNLKISHFRSYKNVEILTSGCPV-ALFGSNGAGKTNILEALSLLSPGRGLRRSRVDE 62 Query: 87 IKKR 90 ++++ Sbjct: 63 MERK 66 >gi|188527177|ref|YP_001909864.1| hypothetical protein HPSH_01920 [Helicobacter pylori Shi470] gi|188143417|gb|ACD47834.1| hypothetical protein HPSH_01920 [Helicobacter pylori Shi470] Length = 396 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEAL-YCLVGKS 49 >gi|162449223|ref|YP_001611590.1| putative ATPase [Sorangium cellulosum 'So ce 56'] gi|161159805|emb|CAN91110.1| putative ATPase [Sorangium cellulosum 'So ce 56'] Length = 428 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY---GYTQRRKHGD 85 L I + +F+ F I T++ G N GKS+L +A +L GY+ G+ Sbjct: 2 LTSITLENFKSFR-KAAIPLGP-FTLLVGTNASGKSNLRDAFRFLHGVGRGYSLAEILGE 59 Query: 86 S 86 Sbjct: 60 K 60 >gi|114769642|ref|ZP_01447252.1| recombination protein F [alpha proteobacterium HTCC2255] gi|114549347|gb|EAU52229.1| recombination protein F [alpha proteobacterium HTCC2255] Length = 364 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ISHFR + ++ + + + G NG GK+++ EA+ L G RR D Sbjct: 4 IAVTNLKISHFRSYKNVEILTSGCPV-ALFGSNGAGKTNILEALSLLSPGRGLRRSRVDE 62 Query: 87 IKKR 90 ++++ Sbjct: 63 MERK 66 >gi|257876375|ref|ZP_05656028.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257810541|gb|EEV39361.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 1108 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + KL + + H++ + + Q +EF + +T++ GQ G GKS++ +A+ + G Q+ Sbjct: 1 MIKLKRLLLIHWQAY-DFQLVEF-EGITLITGQTGVGKSTIIDALNVILLGEKQKHIFNK 58 Query: 86 SIKKRSIKT 94 + + S +T Sbjct: 59 AANENSRRT 67 >gi|257466901|ref|ZP_05631212.1| exonuclease SBCC [Fusobacterium gonidiaformans ATCC 25563] gi|315918048|ref|ZP_07914288.1| exonuclease SbcC [Fusobacterium gonidiaformans ATCC 25563] gi|313691923|gb|EFS28758.1| exonuclease SbcC [Fusobacterium gonidiaformans ATCC 25563] Length = 921 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ + ++++R + I+ + F+ + ++ G+NG GK+S+ EAI + T R Sbjct: 1 MQIKKVVLNNYRSHSHIE-VAFSKGINLILGKNGRGKTSILEAIGLALFHMTDRTGK 56 >gi|226326149|ref|ZP_03801667.1| hypothetical protein COPCOM_03968 [Coprococcus comes ATCC 27758] gi|225205691|gb|EEG88045.1| hypothetical protein COPCOM_03968 [Coprococcus comes ATCC 27758] Length = 361 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +R + EI IEF I G N GK+++ E + + R + Sbjct: 3 IKSLKLKDYRNY-EILNIEFDHATNIFYGDNAQGKTNILEGVYLSGTTKSHRGTKDRDLI 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGQD 66 >gi|86747131|ref|YP_483627.1| recombination protein F [Rhodopseudomonas palustris HaA2] gi|86570159|gb|ABD04716.1| DNA replication and repair protein RecF [Rhodopseudomonas palustris HaA2] Length = 378 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + A+ + ++ G NG GK++ EAI +L G RR D + Sbjct: 5 RITRLTLTHFRNYRAAVLTTSAERV-VLVGANGAGKTNCLEAISFLSPGRGLRRATLDDV 63 Query: 88 KK 89 Sbjct: 64 AD 65 >gi|56695076|ref|YP_165423.1| recombination protein F [Ruegeria pomeroyi DSS-3] gi|56676813|gb|AAV93479.1| DNA replication and repair protein RecF [Ruegeria pomeroyi DSS-3] Length = 366 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L I ISHFR + ++ + ++G NG GK+++ EA+ G RR Sbjct: 1 MALALTAITISHFRSHR-LLRLSLDERPVAIHGPNGAGKTNILEAVSMFSPGRGMRRASA 59 Query: 85 DSIKKR 90 + +R Sbjct: 60 AEMTRR 65 >gi|87300613|ref|ZP_01083455.1| hypothetical protein WH5701_04175 [Synechococcus sp. WH 5701] gi|87284484|gb|EAQ76436.1| hypothetical protein WH5701_04175 [Synechococcus sp. WH 5701] Length = 568 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK--HG 84 +L I I +FRG E +I+ A T++ G+N GK+S+ EAI R+ G Sbjct: 1 MQLTKIAIKNFRGI-EELEIDLAP-CTVLIGENNTGKTSILEAIYTCLSRNLARKVVPFG 58 Query: 85 DS-------IKKRSIKTPMPMC 99 D + S P+ + Sbjct: 59 DYDFHLTAAMPDPSSSPPIELN 80 >gi|260887488|ref|ZP_05898751.1| DNA replication and repair protein RecF [Selenomonas sputigena ATCC 35185] gi|330837870|ref|YP_004412450.1| DNA replication and repair protein RecF [Selenomonas sputigena ATCC 35185] gi|260862775|gb|EEX77275.1| DNA replication and repair protein RecF [Selenomonas sputigena ATCC 35185] gi|329745634|gb|AEB98990.1| DNA replication and repair protein RecF [Selenomonas sputigena ATCC 35185] Length = 369 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K + + FR + E + + ++ + G+N GK++++EA+ + G + R Sbjct: 1 MKAKSLRLKCFRNY-EELDLSLSPNINVFLGENAQGKTNIAEALYYAAIGRSHR 53 >gi|190343127|gb|ACE75525.1| HP1079 [Helicobacter pylori] Length = 381 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|213855288|ref|ZP_03383528.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 1036 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLHLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|108758892|ref|YP_635346.1| hypothetical protein MXAN_7233 [Myxococcus xanthus DK 1622] gi|108462772|gb|ABF87957.1| hypothetical protein MXAN_7233 [Myxococcus xanthus DK 1622] Length = 487 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 +L+ KL +++ FR ++ F+ L ++ G+NG GKS+L + Sbjct: 73 RLMLKLQWLQVHQFRSVKPGTRLLFSPSLNVLLGENGTGKSTLLD 117 >gi|317155217|ref|XP_001824397.2| DNA repair protein Rad18 [Aspergillus oryzae RIB40] Length = 1142 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + +E + + G+NG GKS++ AI G G S+K Sbjct: 103 LERVECYNFMCH-DHFYVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 161 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK V R K Q Sbjct: 162 -SFIKEGKESATIVVRIKNQ 180 >gi|288917595|ref|ZP_06411959.1| hypothetical protein FrEUN1fDRAFT_1654 [Frankia sp. EUN1f] gi|288350988|gb|EFC85201.1| hypothetical protein FrEUN1fDRAFT_1654 [Frankia sp. EUN1f] Length = 842 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGYTQRRKH 83 ++ + + + F E +++EF LT+V G N GKS+ +A+ W F G Q Sbjct: 1 MRIRALGLERYGAF-EARRVEFGPGLTLVVGANEAGKSTTLDALSDLLWTFRGTRQSFHF 59 Query: 84 GDSIKKRSIKTPMP 97 G S +P Sbjct: 60 GLGALSLSADLELP 73 >gi|58266006|ref|XP_570159.1| DNA repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|57226392|gb|AAW42852.1| DNA repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1125 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F + ++F + V G NG GKS++ AI G G +K Sbjct: 99 IKSISLIDFMCHRHLT-VDFGPRMNFVVGHNGSGKSAVLTAIAVALGGKANLTGRGTGLK 157 Query: 89 KR 90 Sbjct: 158 DL 159 >gi|15611414|ref|NP_223065.1| hypothetical protein jhp0346 [Helicobacter pylori J99] gi|4154870|gb|AAD05921.1| putative [Helicobacter pylori J99] Length = 381 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|223043401|ref|ZP_03613447.1| DNA replication and repair protein RecF [Staphylococcus capitis SK14] gi|222443190|gb|EEE49289.1| DNA replication and repair protein RecF [Staphylococcus capitis SK14] Length = 371 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +++ +R + E ++ + I+ G+N GK++L E+I L + R + Sbjct: 1 MKLNTLQLEKYRNY-EEVTLDCHPEVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|167575023|ref|ZP_02367897.1| SMC protein, N-terminal [Burkholderia oklahomensis C6786] Length = 1157 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + + +I+F + L + G G GKS+L +AI Y T R Sbjct: 1 MKIRSLRLKNLNSLKGEWRIDFTTPPFSDNGLFAIVGPTGAGKSTLLDAICLALYHETPR 60 >gi|220915126|ref|YP_002490430.1| DNA replication and repair protein RecF [Anaeromyxobacter dehalogenans 2CP-1] gi|254790458|sp|B8J6Y3|RECF_ANAD2 RecName: Full=DNA replication and repair protein recF gi|219952980|gb|ACL63364.1| DNA replication and repair protein RecF [Anaeromyxobacter dehalogenans 2CP-1] Length = 372 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL + + FR ++ + T++ G+NG GK++L EAI +L R Sbjct: 1 MKLLSLHVQDFRNLAAVELAP-SPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVRLAE 59 Query: 87 IKKRSIKT 94 + + + Sbjct: 60 LVRFGAEQ 67 >gi|126464989|ref|YP_001040098.1| SMC domain-containing protein [Staphylothermus marinus F1] gi|126013812|gb|ABN69190.1| SMC domain protein [Staphylothermus marinus F1] Length = 832 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L + + + R + + + +T++ G G GKS++ +I + +G + K D ++ Sbjct: 3 ILGLRLKNIRSYIDKTIVFPRQGITVIYGDVGTGKSTILSSIAYALFGQP-KSKIPDPME 61 Query: 89 KRSI 92 + + Sbjct: 62 RYAY 65 >gi|115738152|ref|XP_794820.2| PREDICTED: similar to SMC6 protein [Strongylocentrotus purpuratus] gi|115944201|ref|XP_001188037.1| PREDICTED: similar to SMC6 protein [Strongylocentrotus purpuratus] Length = 1236 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + F ++ V G+NG GKS++ AI G G+S+K Sbjct: 131 IEKISVKNFICHG-RLECNFGPNVNFVVGRNGSGKSAILTAIVVGLGGKAIATSRGNSVK 189 >gi|114561191|ref|YP_748704.1| DNA replication and repair protein RecF [Shewanella frigidimarina NCIMB 400] gi|122301223|sp|Q08A49|RECF_SHEFN RecName: Full=DNA replication and repair protein recF gi|114332484|gb|ABI69866.1| DNA replication and repair protein RecF [Shewanella frigidimarina NCIMB 400] Length = 360 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I FR T ++ D L ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLSRINIGSFRNITS-ASLQPCDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|332976415|gb|EGK13264.1| ATP-binding nuclease [Psychrobacter sp. 1501(2011)] Length = 674 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +T YY ++ ++ ++ I F+ F + I L+ G N GK++ EA+ LF Sbjct: 1 MTFYYG--VLMQISNLRIKGFKSFGPDGVDINLKHKLSAFIGLNSSGKTTALEALRKLFG 58 Query: 76 GYTQRRK 82 R Sbjct: 59 SSLSERM 65 >gi|295133310|ref|YP_003583986.1| DNA replication and repair protein RecF [Zunongwangia profunda SM-A87] gi|294981325|gb|ADF51790.1| DNA replication and repair protein RecF [Zunongwangia profunda SM-A87] Length = 359 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ E +F + + G NG GK+++ ++I L +G + Sbjct: 1 MHLKHLSLLNYKNL-ESSSFDFDPKINCMVGHNGVGKTNVLDSIYHLAFGKS 51 >gi|229173819|ref|ZP_04301359.1| hypothetical protein bcere0006_29170 [Bacillus cereus MM3] gi|228609669|gb|EEK66951.1| hypothetical protein bcere0006_29170 [Bacillus cereus MM3] Length = 592 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I+I FR F + + I FA+ T++ G N GK++L A+ LF Sbjct: 1 MKIEWIKIKGFRNF-DNETINFAEQ-TLIIGANDIGKTNLIYALRLLFD 47 >gi|183597170|ref|ZP_02958663.1| hypothetical protein PROSTU_00413 [Providencia stuartii ATCC 25827] gi|188023484|gb|EDU61524.1| hypothetical protein PROSTU_00413 [Providencia stuartii ATCC 25827] Length = 364 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR E + A+ + G NG GK+S+ EAI L +G R + + Sbjct: 3 LSRLLIRDFRNI-EDADLALANGFNFLIGPNGSGKTSVLEAIYTLGHGRAFRSIQANRVI 61 Query: 89 KRSIKT 94 + Sbjct: 62 RHEQAQ 67 >gi|16329624|ref|NP_440352.1| hypothetical protein slr1048 [Synechocystis sp. PCC 6803] gi|1652107|dbj|BAA17032.1| slr1048 [Synechocystis sp. PCC 6803] Length = 1006 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 31 DIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +F + + + F H + G NG GKSSL EAI W +G + D Sbjct: 5 QLILKNFLSYQD-VSLNFRGLHTACICGSNGAGKSSLLEAITWAIWGKCRAESEDD 59 >gi|114567245|ref|YP_754399.1| exonuclease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338180|gb|ABI69028.1| exonuclease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 1223 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + I+F+ D + + G G GK+++ +AI YG T R Sbjct: 1 MKIKQIRFQNLNSLVGEWIIDFSHPAYLSDGIFAITGPTGAGKTTVLDAICLALYGRTPR 60 >gi|332666578|ref|YP_004449366.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332335392|gb|AEE52493.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 706 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + + + +FR F + K F + + G+NG GK+++ Sbjct: 1 MHITSLSLRNFRNF-KKAKFHFQKGINTLIGENGSGKTNVF 40 >gi|326574983|gb|EGE24912.1| nuclease SbcCD subunit C [Moraxella catarrhalis O35E] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326568733|gb|EGE18803.1| nuclease SbcCD subunit C [Moraxella catarrhalis BC8] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326568608|gb|EGE18679.1| nuclease SbcCD subunit C [Moraxella catarrhalis BC7] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326565479|gb|EGE15650.1| nuclease SbcCD subunit C [Moraxella catarrhalis 12P80B1] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326564664|gb|EGE14882.1| nuclease SbcCD subunit C [Moraxella catarrhalis 46P47B1] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326562699|gb|EGE13001.1| nuclease SbcCD subunit C [Moraxella catarrhalis 103P14B1] gi|326572602|gb|EGE22591.1| nuclease SbcCD subunit C [Moraxella catarrhalis CO72] gi|326574198|gb|EGE24146.1| nuclease SbcCD subunit C [Moraxella catarrhalis 101P30B1] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|326559563|gb|EGE09977.1| nuclease SbcCD subunit C [Moraxella catarrhalis 7169] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|315652712|ref|ZP_07905686.1| hypothetical protein HMPREF0381_2680 [Eubacterium saburreum DSM 3986] gi|315484914|gb|EFU75322.1| hypothetical protein HMPREF0381_2680 [Eubacterium saburreum DSM 3986] Length = 1109 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ + + ++ F + I+F ++T + G N GK+++ +A+ + G+ Sbjct: 1 MIRMKRLHLINWHNFQDDI-IDFK-NITYLLGVNAVGKTTIMDAVRYCLTTNKDFNTAGN 58 Query: 86 S 86 Sbjct: 59 K 59 >gi|296113561|ref|YP_003627499.1| nuclease SbcCD subunit C [Moraxella catarrhalis RH4] gi|295921255|gb|ADG61606.1| nuclease SbcCD subunit C [Moraxella catarrhalis RH4] Length = 1296 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+F D L + G G GK+++ +AI YG T R Sbjct: 1 MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR 60 >gi|238026821|ref|YP_002911052.1| hypothetical protein bglu_1g11800 [Burkholderia glumae BGR1] gi|237876015|gb|ACR28348.1| Hypothetical protein bglu_1g11800 [Burkholderia glumae BGR1] Length = 477 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++ F+ I+F T + G NG GKS+L +AI +L Sbjct: 2 LTRLKVVGFKNLR-KIDIQFGL-FTCIAGANGVGKSNLFDAITFL 44 >gi|224060335|ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa] Length = 1316 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKHVITFLRPLTLIVGPNGAGKTTIIECLKVACTG 53 >gi|217031595|ref|ZP_03437100.1| hypothetical protein HPB128_21g153 [Helicobacter pylori B128] gi|298736689|ref|YP_003729219.1| hypothetical protein HPB8_1198 [Helicobacter pylori B8] gi|216946795|gb|EEC25391.1| hypothetical protein HPB128_21g153 [Helicobacter pylori B128] gi|298355883|emb|CBI66755.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 394 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + KI+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKNF-KNTKIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|254431230|ref|ZP_05044933.1| SMC domain protein [Cyanobium sp. PCC 7001] gi|197625683|gb|EDY38242.1| SMC domain protein [Cyanobium sp. PCC 7001] Length = 1021 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 9/68 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY----- 77 + +E+ F + E I F D L +++G G GK+ L +A+ + YG Sbjct: 1 MRPHLLEMEAFGPYAEPVTICFDTLCRDGLFLIHGSTGSGKTYLLDALCFALYGEVSGER 60 Query: 78 TQRRKHGD 85 + + D Sbjct: 61 SLKGLRSD 68 >gi|329896051|ref|ZP_08271287.1| DNA repair protein RecN [gamma proteobacterium IMCC3088] gi|328922011|gb|EGG29375.1| DNA repair protein RecN [gamma proteobacterium IMCC3088] Length = 550 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I I +F E I+F +T++ G+ G GKS L +A+ Sbjct: 2 LTHIHIKNF-AVVEDIAIDFDAGMTVITGETGAGKSILIDALGLCLG 47 >gi|288870134|ref|ZP_06409643.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288868252|gb|EFD00551.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 626 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+LDI I+ F F + F D L IV G+N GKS++ I + +G ++R Sbjct: 7 MKILDIYINGFGKFHGRN-LSFEDGLNIVYGKNEAGKSTIHTFIRGMLFGIEKQRGRAS 64 >gi|190343123|gb|ACE75522.1| HP1079 [Helicobacter pylori] Length = 394 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + KI+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKNF-KNTKIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|295101031|emb|CBK98576.1| Predicted ATPase [Faecalibacterium prausnitzii L2-6] Length = 240 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 F +T G+NG GKS+L EAI + YG+ + + + +C A+ Sbjct: 33 TFTFHKPITFFVGENGSGKSTLLEAIA-VAYGFNAEGGTKNY-SFSTYNSHSELCEAM 88 >gi|293415886|ref|ZP_06658526.1| DNA repair protein RecN [Escherichia coli B185] gi|291432075|gb|EFF05057.1| DNA repair protein RecN [Escherichia coli B185] Length = 553 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALALCLGGRAEA 52 >gi|160942826|ref|ZP_02090066.1| hypothetical protein FAEPRAM212_00303 [Faecalibacterium prausnitzii M21/2] gi|313113954|ref|ZP_07799510.1| ABC transporter, ATP-binding family protein [Faecalibacterium cf. prausnitzii KLE1255] gi|158445878|gb|EDP22881.1| hypothetical protein FAEPRAM212_00303 [Faecalibacterium prausnitzii M21/2] gi|295101990|emb|CBK99535.1| Predicted ATPase [Faecalibacterium prausnitzii L2-6] gi|295103317|emb|CBL00861.1| Predicted ATPase [Faecalibacterium prausnitzii SL3/3] gi|310623717|gb|EFQ07116.1| ABC transporter, ATP-binding family protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 240 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 F +T G+NG GKS+L EAI + YG+ + + + +C A+ Sbjct: 33 TFTFHKPITFFVGENGSGKSTLLEAIA-VAYGFNAEGGTKNY-SFSTYNSHSELCEAM 88 >gi|153871512|ref|ZP_02000665.1| ATPase [Beggiatoa sp. PS] gi|152072020|gb|EDN69333.1| ATPase [Beggiatoa sp. PS] Length = 106 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHL----TIVNGQNGYGKSSLSEAIEWLF 74 K+ I + +++ F + + F +D + T++ G NG GKSS+ +AI L Sbjct: 1 MKIKQITLQNYKRFVQSKTFSFTDSDGIVNEKTLIVGNNGTGKSSILQAIVILL 54 >gi|308799039|ref|XP_003074300.1| DNA repair protein recN (ISS) [Ostreococcus tauri] gi|116000471|emb|CAL50151.1| DNA repair protein recN (ISS) [Ostreococcus tauri] Length = 678 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L ++I++F Q +EF L ++ G++G GKS L +AI Sbjct: 61 YLQRLKITNF-ALVSEQTVEFERGLNVITGKSGSGKSVLLDAI 102 >gi|329297783|ref|ZP_08255119.1| recombination protein F [Plautia stali symbiont] Length = 361 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EQADLTLAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHDQD 66 >gi|313203095|ref|YP_004041752.1| DNA replication and repair protein recf [Paludibacter propionicigenes WB4] gi|312442411|gb|ADQ78767.1| DNA replication and repair protein RecF [Paludibacter propionicigenes WB4] Length = 363 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L + I +++ E + + F+ ++ G NG GK+++ +AI +L + + Sbjct: 1 MRLNSLSILNYKNIREAELV-FSPNINCFIGNNGMGKTNILDAIYFLSFCKSHSN 54 >gi|304558200|gb|ADM40864.1| hypothetical protein ETAF_0742 [Edwardsiella tarda FL6-60] Length = 708 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGY 77 + ++ I +FR F + K+ F + + G+N GK+++ EA+ + Y Sbjct: 1 MYIKNLSIRNFRNF-QSTKLNFKKECVNTIVGENSSGKTNVFEAMRLILDDY 51 >gi|271967712|ref|YP_003341908.1| exonuclease SbcC [Streptosporangium roseum DSM 43021] gi|270510887|gb|ACZ89165.1| exonuclease SbcC [Streptosporangium roseum DSM 43021] Length = 1291 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY----- 77 + + IS F F ++++F L +++G G GK+++ +A+ + YG Sbjct: 1 MRPHRLWISAFGSFPAEEEVDFDALAEAGLFLIHGPTGAGKTTVLDALCYALYGRVPGKR 60 Query: 78 -TQRRKHGD 85 + + D Sbjct: 61 DSAKSLRCD 69 >gi|257451436|ref|ZP_05616735.1| exonuclease SBCC [Fusobacterium sp. 3_1_5R] gi|317058016|ref|ZP_07922501.1| exonuclease SBCC [Fusobacterium sp. 3_1_5R] gi|313683692|gb|EFS20527.1| exonuclease SBCC [Fusobacterium sp. 3_1_5R] Length = 921 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ + ++++R + I+ + F+ + ++ G+NG GK+S+ EAI + T R Sbjct: 1 MQIKKVVLNNYRSHSHIEVV-FSKGINLILGKNGRGKTSILEAIGLALFHMTDRTGK 56 >gi|255327079|ref|ZP_05368155.1| SMC domain protein [Rothia mucilaginosa ATCC 25296] gi|255296296|gb|EET75637.1| SMC domain protein [Rothia mucilaginosa ATCC 25296] Length = 1093 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L ++E F + + Q+I F + ++NG G GK+++ +AI + YG T Sbjct: 3 LHNLEFEAFMAYPKRQEINFDTLNNAGVFLLNGPTGAGKTTILDAICYALYGET 56 >gi|238022588|ref|ZP_04603014.1| hypothetical protein GCWU000324_02496 [Kingella oralis ATCC 51147] gi|237867202|gb|EEP68244.1| hypothetical protein GCWU000324_02496 [Kingella oralis ATCC 51147] Length = 478 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Query: 27 FKLLDIEISHFRGF-TEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I +S+F+GF E +I F L I G+N GKSS+ EA+++L G Sbjct: 1 MFIKSICLSNFKGFIGENHQINFKIPDGTTAGSGLNIFVGENNSGKSSIFEAVDFLRNG 59 >gi|308063229|gb|ADO05116.1| hypothetical protein HPSAT_01845 [Helicobacter pylori Sat464] Length = 394 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEAL-YCLVGKS 49 >gi|290986805|ref|XP_002676114.1| predicted protein [Naegleria gruberi] gi|284089714|gb|EFC43370.1| predicted protein [Naegleria gruberi] Length = 105 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++ +F K+EF D TI++G+NG GKS++ AI+ + G+SIK Sbjct: 4 IEEIKLKNFMCHP-NFKVEFHDRTTIIHGENGSGKSAVLTAIQVGLGSKAKNTNRGNSIK 62 Query: 89 KR 90 Sbjct: 63 DL 64 >gi|254472181|ref|ZP_05085581.1| DNA replication and repair protein [Pseudovibrio sp. JE062] gi|211958464|gb|EEA93664.1| DNA replication and repair protein [Pseudovibrio sp. JE062] Length = 376 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + ++ FR ++ +E + G NG GK+++ EAI +L G RR Sbjct: 7 VALSRLALTDFRNYSA-ASVELNSRMIAFVGDNGAGKTNILEAISFLSAGRGLRR 60 >gi|183601022|ref|ZP_02962515.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827] gi|188019360|gb|EDU57400.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827] Length = 1225 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|145341341|ref|XP_001415771.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144575994|gb|ABO94063.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1313 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + I R F+ I+F LT++ G+NG GK+++ E ++ Sbjct: 4 VDKLLIKGIRSFSPENEHVIQFPKPLTLIVGRNGAGKTTIIECLK 48 >gi|59710618|ref|YP_203394.1| recombination protein F [Vibrio fischeri ES114] gi|75507126|sp|Q5E8Z0|RECF_VIBF1 RecName: Full=DNA replication and repair protein recF gi|59478719|gb|AAW84506.1| gap repair protein [Vibrio fischeri ES114] Length = 359 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I+ FR T I+ + V G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIINDFRNIT-TCDIQLSSGFNFVIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|33599488|ref|NP_887048.1| hypothetical protein BB0497 [Bordetella bronchiseptica RB50] gi|33567084|emb|CAE30997.1| hypothetical protein BB0497 [Bordetella bronchiseptica RB50] Length = 1038 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Query: 29 LLDIEISHFRGFTEI------QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + +FRGF EI I F+ I NG GKSSL EA+E G + Sbjct: 176 LGSLRVKNFRGFGEIGPDDLGTFIRFSKLKNIFYAPNGGGKSSLCEALEIGTTGDIKEAA 235 Query: 83 H 83 Sbjct: 236 R 236 >gi|253990978|ref|YP_003042334.1| nuclease sbccd subunit c [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782428|emb|CAQ85592.1| nuclease sbccd subunit c [Photorhabdus asymbiotica] Length = 1229 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 >gi|225621164|ref|YP_002722422.1| putative ATPase [Brachyspira hyodysenteriae WA1] gi|225215984|gb|ACN84718.1| putative ATPase [Brachyspira hyodysenteriae WA1] Length = 345 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++ I +FRGF + KI+ + + G+N GK+S+ EA+ + + Sbjct: 4 IMIKNLYIENFRGF-DKLKIDNIKKINFLVGKNNCGKTSVLEALMLILSESRIK 56 >gi|305663212|ref|YP_003859500.1| SMC domain protein [Ignisphaera aggregans DSM 17230] gi|304377781|gb|ADM27620.1| SMC domain protein [Ignisphaera aggregans DSM 17230] Length = 492 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I I +F+ ++ +E + + ++ G N GK+++ EA+++L Sbjct: 14 VFVRRIYIENFKSIKHLE-LELSPGVNVLVGPNASGKTNILEALDFL 59 >gi|257470422|ref|ZP_05634513.1| RECF protein [Fusobacterium ulcerans ATCC 49185] gi|317064630|ref|ZP_07929115.1| DNA replication and repair protein recF [Fusobacterium ulcerans ATCC 49185] gi|313690306|gb|EFS27141.1| DNA replication and repair protein recF [Fusobacterium ulcerans ATCC 49185] Length = 375 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L+I +FR + ++F L + G+NG GK+SL EA+ + G + R Sbjct: 1 MEILEINYVNFRNLQDGN-VKFFPKLNLFYGKNGQGKTSLLEALYFNSTGKSFRTNKSSE 59 Query: 87 IKKRSIK 93 + K K Sbjct: 60 MMKYGYK 66 >gi|255947060|ref|XP_002564297.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591314|emb|CAP97541.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1294 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 34 ISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 2 LTGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 46 >gi|88607598|ref|YP_505900.1| recombination protein F [Anaplasma phagocytophilum HZ] gi|88598661|gb|ABD44131.1| putative DNA replication and repair protein RecF [Anaplasma phagocytophilum HZ] Length = 371 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR ++ ++E ++ G+NG GK+++ EA+ L G R D + Sbjct: 8 YVQVVKLVNFRNYS-KVELESNGKSVVLLGENGVGKTNILEAVSLLSKGPGLRNVSADCM 66 Query: 88 KKRSIKTP 95 + P Sbjct: 67 QNSGTTIP 74 >gi|229161310|ref|ZP_04289295.1| Exonuclease [Bacillus cereus R309803] gi|228622124|gb|EEK78965.1| Exonuclease [Bacillus cereus R309803] Length = 1022 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVIDFNDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 90 RSIKTPMPMCMAVPRCKYQLK 110 RS M +V +QLK Sbjct: 61 RSQFADDNMYTSV-ELTFQLK 80 >gi|257783818|ref|YP_003179035.1| DNA replication and repair protein RecF [Atopobium parvulum DSM 20469] gi|257472325|gb|ACV50444.1| DNA replication and repair protein RecF [Atopobium parvulum DSM 20469] Length = 363 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + + +FR F + I+ + TI G+N GK++ EA++ L GY+ R+ Sbjct: 3 LKVEHVSLYNFRCFASKE-IDLSAQTTIFVGKNAAGKTNTVEALQLLTAGYSFRK 56 >gi|229918747|ref|YP_002887393.1| exonuclease SbcC [Exiguobacterium sp. AT1b] gi|229470176|gb|ACQ71948.1| exonuclease SbcC [Exiguobacterium sp. AT1b] Length = 473 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + F+ L +V G + GK+S+ AI W+ + Sbjct: 4 ITQVRLEGFQSHV-KSHFHLGQGLNVVTGPSDAGKTSIIRAIRWVAF 49 >gi|168185970|ref|ZP_02620605.1| putative RecF/RecN/SMC N domain [Clostridium botulinum C str. Eklund] gi|169296094|gb|EDS78227.1| putative RecF/RecN/SMC N domain [Clostridium botulinum C str. Eklund] Length = 761 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + + +F+G ++ ++F+ +T + G NG GKS++++A WL + Sbjct: 5 IFLKKLALRNFKGIKDLT-VDFSK-VTNIYGGNGTGKSTIADAFMWLLF 51 >gi|167032566|ref|YP_001667797.1| SMC domain-containing protein [Pseudomonas putida GB-1] gi|166859054|gb|ABY97461.1| SMC domain protein [Pseudomonas putida GB-1] Length = 1214 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPVEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|104780877|ref|YP_607375.1| exonuclease SbcC [Pseudomonas entomophila L48] gi|95109864|emb|CAK14569.1| exonuclease SbcC [Pseudomonas entomophila L48] Length = 1214 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPVEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|326388134|ref|ZP_08209737.1| recombination protein F [Novosphingobium nitrogenifigens DSM 19370] gi|326207300|gb|EGD58114.1| recombination protein F [Novosphingobium nitrogenifigens DSM 19370] Length = 395 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + + FR +++ ++ G+NG GK+++ EAI G RR H Sbjct: 36 VMALTRLSLRDFRNHAA-TRLDGMATFNVLVGENGAGKTNVLEAISLFSPGRGMRRAHPA 94 Query: 86 SI 87 + Sbjct: 95 DM 96 >gi|325953980|ref|YP_004237640.1| SMC domain protein [Weeksella virosa DSM 16922] gi|323436598|gb|ADX67062.1| SMC domain protein [Weeksella virosa DSM 16922] Length = 1010 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + E Q+I+F+ L + G+ G GKS++ EAI + YG + R Sbjct: 6 LRFEGLYSYQEPQEIDFSSLIDAGLFGIFGKVGSGKSTILEAITFALYGNSDR 58 >gi|282901659|ref|ZP_06309575.1| DNA repair protein RecN [Cylindrospermopsis raciborskii CS-505] gi|281193422|gb|EFA68403.1| DNA repair protein RecN [Cylindrospermopsis raciborskii CS-505] Length = 575 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +++F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LLSLRIENF-ALIDQLELDFGPGLNVLTGETGAGKSIILDAIDAVLGGRVSSRV 54 >gi|269791622|ref|YP_003316526.1| DNA replication and repair protein RecF [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099257|gb|ACZ18244.1| DNA replication and repair protein RecF [Thermanaerovibrio acidaminovorans DSM 6589] Length = 354 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 I++ +R E Q + + L + G NG GK++L EA + Sbjct: 1 MHFRSIKLYRYRNL-EDQAVNLSPGLNLFFGPNGAGKTNLLEA--FCAASGWGGFGRPSM 57 Query: 87 IKKRSIKTPMPMCMAVPR 104 I +R +P PM AV + Sbjct: 58 IPRRGDGSPSPMSAAVAQ 75 >gi|268316816|ref|YP_003290535.1| SMC domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334350|gb|ACY48147.1| SMC domain protein [Rhodothermus marinus DSM 4252] Length = 1019 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 32 IEISHFRGFTEIQKI-EFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +F + E + +F + ++G NG GKS+L +AI W +G ++ Sbjct: 6 LRLKNFMSYGEAAPVLDFEQFQVACLSGNNGQGKSALLDAITWALWGEARK 56 >gi|227549439|ref|ZP_03979488.1| recombination protein F [Corynebacterium lipophiloflavum DSM 44291] gi|227078516|gb|EEI16479.1| recombination protein F [Corynebacterium lipophiloflavum DSM 44291] Length = 394 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+++ FR + E+ + T+ G+NG+GK+++ EA+ + + R Sbjct: 1 MYVRDLDLRDFRSWPELT-LTLEQGATVFAGRNGHGKTNIVEALHYTSTLGSHRVSTDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRSG 64 >gi|120405388|ref|YP_955217.1| hypothetical protein Mvan_4435 [Mycobacterium vanbaalenii PYR-1] gi|119958206|gb|ABM15211.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length = 885 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG T IEF D + +V+G N GKSS+ EA++ L Sbjct: 1 MKLHRLALTNYRGITHRD-IEFPDRGVVVVSGPNEAGKSSMLEALDLLL 48 >gi|320527736|ref|ZP_08028906.1| hypothetical protein HMPREF9430_01018 [Solobacterium moorei F0204] gi|320131901|gb|EFW24461.1| hypothetical protein HMPREF9430_01018 [Solobacterium moorei F0204] Length = 937 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + +S F + +++ + + + ++ G G GK+++ +AI + +G Sbjct: 1 MRPIKLVLSAFGPYASKVELDLSKLGENGVYLITGDTGAGKTTIFDAITFALFGKPSGDI 60 Query: 83 HGDSIKKRSIKTP 95 + Sbjct: 61 RDVKTLRSEYANE 73 >gi|253743852|gb|EET00143.1| RAD50 DNA repair protein, putative [Giardia intestinalis ATCC 50581] Length = 1383 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSS 65 ++ L + + + R + + I F+ +LTI+ G NG GKS+ Sbjct: 1 MYYLDQLTLKNVRSYKDRPSTIMFSPNLTIITGHNGAGKST 41 >gi|167465102|ref|ZP_02330191.1| hypothetical protein Plarl_21506 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 125 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +EI + + ++ LT+V G+N GK+S+ +AI W G R Sbjct: 1 MIKINKLEIENVKRVKAVKIEPTTSGLTVVGGKNNQGKTSVLDAIAWGLGGNKYR 55 >gi|167462155|ref|ZP_02327244.1| hypothetical protein Plarl_06295 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 436 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ +EI + + ++ LT+V G+N GK+S+ +AI W G R Sbjct: 1 MIKINKLEIENVKRVKAVKIEPTTSGLTVVGGKNNQGKTSVLDAIAWGLGGNKYR 55 >gi|10954522|ref|NP_044161.1| hypothetical protein MJECL35 [Methanocaldococcus jannaschii DSM 2661] gi|2496235|sp|Q60291|Y3535_METJA RecName: Full=Uncharacterized protein MJECL35 gi|1522669|gb|AAC37104.1| hypothetical protein MJ_ECL35 [Methanocaldococcus jannaschii DSM 2661] Length = 630 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 6/71 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRK 82 K+ ++I +FR ++ +EF +T++ G+N GK+S+ I +F T++ Sbjct: 1 MKIEQVKIENFRSIYDLT-VEFGK-VTVLIGKNSSGKTSILNVIRIIFENLDTNSTEKNL 58 Query: 83 HGDSIKKRSIK 93 + +I ++++K Sbjct: 59 NITTITEQNLK 69 >gi|258545419|ref|ZP_05705653.1| ATP-dependent dsDNA exonuclease (SbcC) [Cardiobacterium hominis ATCC 15826] gi|258519338|gb|EEV88197.1| ATP-dependent dsDNA exonuclease (SbcC) [Cardiobacterium hominis ATCC 15826] Length = 968 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIE-----FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ I +++ T +I+ ++D++ + G G GK+++ +AI YG T R Sbjct: 1 MRIHTIRLANLNALTGTWEIDLDHPAYSDNIYALTGPTGAGKTTILDAISLALYGRTPRL 60 Query: 82 KH 83 Sbjct: 61 AR 62 >gi|146309670|ref|YP_001174744.1| recombination protein F [Enterobacter sp. 638] gi|166918723|sp|A4W4R3|RECF_ENT38 RecName: Full=DNA replication and repair protein recF gi|145316546|gb|ABP58693.1| DNA replication and repair protein RecF [Enterobacter sp. 638] Length = 357 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQVGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|30249367|ref|NP_841437.1| ABC transporter ATPase [Nitrosomonas europaea ATCC 19718] gi|30180686|emb|CAD85303.1| ATP/GTP-binding site motif A (P-loop):ABC transporter [Nitrosomonas europaea ATCC 19718] Length = 1087 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + +I+F +D + + G G GK+++ +AI YG T R Sbjct: 1 MQILQVRLKNLNSLVGEWEIDFTDPAFVSDGIFSITGPTGAGKTTVLDAICLALYGRTPR 60 >gi|303245279|ref|ZP_07331563.1| SMC domain protein [Desulfovibrio fructosovorans JJ] gi|302493128|gb|EFL52990.1| SMC domain protein [Desulfovibrio fructosovorans JJ] Length = 395 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+I F+ ++ I+ + + G NG GKS++ EAI + + +S+ Sbjct: 2 IDKIKIVGFKSLSD-VSIDLGK-VNVFIGANGSGKSNILEAIG-VMSAAASGKVDDESLM 58 Query: 89 KRSIKTPMP 97 +R ++ +P Sbjct: 59 RRGVRPGLP 67 >gi|329120398|ref|ZP_08249065.1| hypothetical protein HMPREF9123_2496 [Neisseria bacilliformis ATCC BAA-1200] gi|327462353|gb|EGF08679.1| hypothetical protein HMPREF9123_2496 [Neisseria bacilliformis ATCC BAA-1200] Length = 680 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F+ + + + F ++ ++ QNG+GK++L EA+ Y Sbjct: 1 MWIHSIRLRNFKSY-DNVQFTFPEPKDGRNIILIGAQNGHGKTTLLEAVYLCLY 53 >gi|258515004|ref|YP_003191226.1| hypothetical protein Dtox_1746 [Desulfotomaculum acetoxidans DSM 771] gi|257778709|gb|ACV62603.1| conserved hypothetical protein [Desulfotomaculum acetoxidans DSM 771] Length = 1065 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +++ ++I F + + A L ++ G N GKS+L I + +G+ RR + Sbjct: 1 MRIMRLDIHGFGIYRDFFWDSLAPGLNVIEGPNEAGKSTLMAFIRAVLFGFAGRRGSENR 60 Query: 87 IKKRSIK 93 + + Sbjct: 61 YELSGSR 67 >gi|210610075|ref|ZP_03288254.1| hypothetical protein CLONEX_00440 [Clostridium nexile DSM 1787] gi|210152686|gb|EEA83692.1| hypothetical protein CLONEX_00440 [Clostridium nexile DSM 1787] Length = 1026 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + ++I F E Q I+F + G G GKS++ + + YG Sbjct: 1 MRPIKLKIKGLNSFVEEQTIDFEKLTKQGFFGIFGPTGSGKSTILDGMILALYGMKA 57 >gi|152975516|ref|YP_001375033.1| SMC domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024268|gb|ABS22038.1| SMC domain protein [Bacillus cytotoxicus NVH 391-98] Length = 1029 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + ++ F + + + I+F+D + ++G G GK+++ +AI + YG + Sbjct: 1 MRPIQLTMTAFGPYKQREVIDFSDLGDHRIFAISGNTGAGKTTIFDAICYALYGEASGEE 60 Query: 83 HGDSIKKRS------IKTPMPMCMAVPRCKYQLK 110 D+ RS + T + + + +Y++K Sbjct: 61 RSDTSMLRSHFADDNVYTSVELTFQLKGKRYEIK 94 >gi|83944866|ref|ZP_00957232.1| recF protein [Oceanicaulis alexandrii HTCC2633] gi|83851648|gb|EAP89503.1| recF protein [Oceanicaulis alexandrii HTCC2633] Length = 388 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++++ FR + + + G+NG GK++L EA+ +L G R D+++ Sbjct: 13 VTRLKLTGFRNYA-RLDLALDARPVALFGENGAGKTNLVEAVSFLGPGRGLRAAGADAVR 71 Query: 89 KRSIKTPMPM 98 +R+ + P+ Sbjct: 72 RRTDQGVDPL 81 >gi|325918051|ref|ZP_08180212.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] gi|325535748|gb|EGD07583.1| RecF/RecN/SMC N-terminal domain-containing protein [Xanthomonas vesicatoria ATCC 35937] Length = 526 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + I I +F+ F + + H+ +V G N GKS+L EAI + G R Sbjct: 1 MPIERIVIDNFKSFRHLD-LPLNAHMNLVVGDNEVGKSTLLEAIHAVVTGQLHGR 54 >gi|283457798|ref|YP_003362390.1| DNA repair ATPase [Rothia mucilaginosa DY-18] gi|283133805|dbj|BAI64570.1| ATPase involved in DNA repair [Rothia mucilaginosa DY-18] Length = 1097 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +E F + + Q+I F + ++NG G GK+++ +AI + YG T Sbjct: 3 LHSLEFEAFMAYPKRQEINFDTLNNAGVFLLNGPTGAGKTTILDAICYALYGET 56 >gi|260662602|ref|ZP_05863497.1| exonuclease SbcC [Lactobacillus fermentum 28-3-CHN] gi|260553293|gb|EEX26236.1| exonuclease SbcC [Lactobacillus fermentum 28-3-CHN] Length = 1034 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + E I+F A L ++ G G GK+++ +A+ YG + Sbjct: 1 MKPLKLTMHYFGPY-EDTTIDFTRFDASPLYLIAGDTGSGKTTIFDAMCVALYGNASNER 59 Query: 83 HGDSIKKRSIKTPMPM 98 + + TP + Sbjct: 60 RSAEMFRSDFATPKQV 75 >gi|227514188|ref|ZP_03944237.1| exonuclease SbcC [Lactobacillus fermentum ATCC 14931] gi|227087451|gb|EEI22763.1| exonuclease SbcC [Lactobacillus fermentum ATCC 14931] Length = 1034 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + E I+F A L ++ G G GK+++ +A+ YG + Sbjct: 1 MKPLKLTMHYFGPY-EDTTIDFTRFDASPLYLIAGDTGSGKTTIFDAMCVALYGNASNER 59 Query: 83 HGDSIKKRSIKTPMPM 98 + + TP + Sbjct: 60 RSAEMFRSDFATPKQV 75 >gi|254467269|ref|ZP_05080680.1| DNA replication and repair protein RecF [Rhodobacterales bacterium Y4I] gi|206688177|gb|EDZ48659.1| DNA replication and repair protein RecF [Rhodobacterales bacterium Y4I] Length = 365 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + +SHFR ++ F + G NG GK+++ EA+ G RR Sbjct: 1 MLALTALTLSHFRSHL-RAELRFDGRPVAIYGNNGAGKTNILEAVSLFSPGRGLRRASAA 59 Query: 86 SIKKR--SIKTPMPMCMAVPRCKYQLK 110 + ++ ++ + + PR Y+++ Sbjct: 60 EMARQPEALGWKLKGELRAPRQAYEVE 86 >gi|190574391|ref|YP_001972236.1| putative conjugative transposon DNA recombination protein [Stenotrophomonas maltophilia K279a] gi|190012313|emb|CAQ45939.1| putative conjugative transposon DNA recombination protein [Stenotrophomonas maltophilia K279a] Length = 526 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + I I +F+ F + + H+ +V G N GKS+L EAI + G R Sbjct: 1 MPIERIVIDNFKSFRHLD-LPLNAHMNLVVGDNEVGKSTLLEAIHAVVTGQLHGR 54 >gi|184154541|ref|YP_001842881.1| exonuclease SbcC [Lactobacillus fermentum IFO 3956] gi|183225885|dbj|BAG26401.1| exonuclease SbcC [Lactobacillus fermentum IFO 3956] Length = 1034 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + E I+F A L ++ G G GK+++ +A+ YG + Sbjct: 1 MKPLKLTMHYFGPY-EDTTIDFTRFDASPLYLIAGDTGSGKTTIFDAMCVALYGNASNER 59 Query: 83 HGDSIKKRSIKTPMPM 98 + + TP + Sbjct: 60 RSAEMFRSDFATPKQV 75 >gi|183984113|ref|YP_001852404.1| hydrolase [Mycobacterium marinum M] gi|183177439|gb|ACC42549.1| conserved hydrolase [Mycobacterium marinum M] Length = 876 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L D Sbjct: 1 MKLHRLVLTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLLE-------FKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ IK P V Sbjct: 53 RSAKKEIKQVKPTNADV 69 >gi|167565073|ref|ZP_02357989.1| SMC protein, N-terminal [Burkholderia oklahomensis EO147] Length = 1157 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + + +I+F + L + G G GKS+L +A+ Y T R Sbjct: 1 MKIRSLRLKNLNSLKGEWRIDFTKPPFSDNGLFAIVGPTGAGKSTLLDAVCLALYHETPR 60 >gi|153872402|ref|ZP_02001306.1| ATPase involved in DNA repair [Beggiatoa sp. PS] gi|152071131|gb|EDN68693.1| ATPase involved in DNA repair [Beggiatoa sp. PS] Length = 679 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + IE+ F+ + + Q +F H+ ++ G NGYGK++L +AI YG Sbjct: 1 MWISKIELRKFKSY-DNQVFKFPAPSEDGRHIILIGGMNGYGKTTLLQAIYLGLYGNEA 58 >gi|148555709|ref|YP_001263291.1| recombination protein F [Sphingomonas wittichii RW1] gi|259563672|sp|A5VA37|RECF_SPHWW RecName: Full=DNA replication and repair protein recF gi|148500899|gb|ABQ69153.1| DNA replication and repair protein RecF [Sphingomonas wittichii RW1] Length = 356 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ FR + I ++ G+NG GK+++ EA+ L G R G + Sbjct: 1 MTVARLMLTDFRSYASAT-IAAGPGFVVLTGENGAGKTNILEAVSMLGPG---RGLRGAA 56 Query: 87 IKKRSIK 93 + + + + Sbjct: 57 LAEMARE 63 >gi|118619205|ref|YP_907537.1| hydrolase [Mycobacterium ulcerans Agy99] gi|118571315|gb|ABL06066.1| conserved hydrolase [Mycobacterium ulcerans Agy99] Length = 876 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L D Sbjct: 1 MKLHRLVLTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLLE-------FKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ IK P V Sbjct: 53 RSAKKEIKQVKPTNADV 69 >gi|90185641|emb|CAJ84824.1| structural maintenance of chromosome 4 protein [Microtus arvalis] Length = 1285 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 81 ITHIVNQNFKSCAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 139 >gi|300865739|ref|ZP_07110502.1| DNA repair protein RecN [Oscillatoria sp. PCC 6506] gi|300336270|emb|CBN55652.1| DNA repair protein RecN [Oscillatoria sp. PCC 6506] Length = 619 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 LL + I +F + I+F L + G+ G GKS + +A++ G RR Sbjct: 2 LLSLRIENF-ALIDSLNIDFGPGLNVFTGETGAGKSIILDALDATLGGKIDRR 53 >gi|291546428|emb|CBL19536.1| hypothetical protein CK1_14050 [Ruminococcus sp. SR1/5] Length = 651 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+L +++ +F+G E++ I+ + + G NG GKS++ A WL YG Sbjct: 1 MKILKMKLENFQGVKELE-IDPQGESSAIYGDNGTGKSTVYNAFTWLMYG 49 >gi|222475723|ref|YP_002564244.1| SMC domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454094|gb|ACM58358.1| SMC domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 926 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K + + + R + E I+F D ++ G NG GKS++ + + + + + G+ Sbjct: 1 MKFKTLILENIRSY-ENGHIDFEDGENLLFGLNGAGKSTILQGVFGGLFQTKMKYQVGND 59 >gi|169831439|ref|YP_001717421.1| metallophosphoesterase [Candidatus Desulforudis audaxviator MP104C] gi|169638283|gb|ACA59789.1| metallophosphoesterase [Candidatus Desulforudis audaxviator MP104C] Length = 695 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + + +F+ + E A L ++ G++G GKS++ A+ WL R ++ Sbjct: 328 LTHLVLENFQSHL-HTEFELAPGLNVILGESGQGKSAIVRALRWLLCREPARDEY 381 >gi|126654737|ref|ZP_01726271.1| DNA repair protein; RecN [Cyanothece sp. CCY0110] gi|126623472|gb|EAZ94176.1| DNA repair protein; RecN [Cyanothece sp. CCY0110] Length = 588 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++I +F + + F L ++ G+ G GKS + +AI+ + G R + Sbjct: 2 LSLLQIKNF-ALVDRLTLPFGQGLNVLTGETGAGKSIILDAIDVVLGGKVNNRLIRQGTQ 60 Query: 89 KRSIKTPMPMCMAV 102 S++ V Sbjct: 61 HASLEATFEGNTKV 74 >gi|323142973|ref|ZP_08077681.1| exonuclease SbcCD, C subunit [Succinatimonas hippei YIT 12066] gi|322417246|gb|EFY07872.1| exonuclease SbcCD, C subunit [Succinatimonas hippei YIT 12066] Length = 1242 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L +E+S+ I+F D + + G G GKS++ +AI Y T R Sbjct: 1 MKVLRVELSNLNSLRGTFNIDFTDEAFTSSGIFAITGPTGAGKSTILDAICLALYSKTPR 60 >gi|268608979|ref|ZP_06142706.1| SMC domain protein [Ruminococcus flavefaciens FD-1] Length = 430 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +E + + + + LT++ G+N GK+S+ +AI W G R Sbjct: 3 VKINTLEFENVKRIKALALEPSPNGLTVIGGRNNQGKTSVLDAICWALGGEKYR 56 >gi|296127079|ref|YP_003634331.1| ATPase [Brachyspira murdochii DSM 12563] gi|296018895|gb|ADG72132.1| putative ATPase [Brachyspira murdochii DSM 12563] Length = 341 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + D+ I +FRGF + KI+ + + G+N GK+S+ EA+ + Sbjct: 2 IKDLYIENFRGF-DKLKIDNIKKINFLVGKNNCGKTSILEALMLTLSESRIK 52 >gi|219851991|ref|YP_002466423.1| DNA sulfur modification protein DndD [Methanosphaerula palustris E1-9c] gi|219546250|gb|ACL16700.1| DNA sulfur modification protein DndD [Methanosphaerula palustris E1-9c] Length = 677 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 17/93 (18%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + + R F + ++F + ++ G+NG GK+++ E+I YG Sbjct: 1 MLLKSLTLENIRIFKGVNTLDFTPVHSSKEQKSIILIGGKNGAGKTTMFESILLCLYGQN 60 Query: 79 Q------RRKHGDS---IKKRSIKTPMPMCMAV 102 ++K+ + R+ KT P A+ Sbjct: 61 SPDGRMGKKKYEKYIAQMTARNKKTEDPYNPAI 93 >gi|89512208|gb|ABD74000.1| recombination protein F [Mycobacterium avium subsp. paratuberculosis] Length = 155 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 VYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALRYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|308161818|gb|EFO64251.1| SMC3-like protein [Giardia lamblia P15] Length = 1231 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++EI +FR + + G NG GKS+ AI + Sbjct: 1 MYLSEVEIRNFRSIVHTSVTGLHPGINVFIGINGAGKSNFYSAILFAL 48 >gi|126668297|ref|ZP_01739256.1| putative GTP-binding protein [Marinobacter sp. ELB17] gi|126627214|gb|EAZ97852.1| putative GTP-binding protein [Marinobacter sp. ELB17] Length = 881 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + + F+ F + + ++ + +++G N GKS+L AI F+ R K + Sbjct: 1 MKLESVRVEQFKQFKKPFLLNGLSNGINVISGPNEAGKSTLVRAIRAAFFER-HRSKSAE 59 Query: 86 SIKKRSIKTPMP 97 ++ + P Sbjct: 60 DLRPWGDSSAAP 71 >gi|298208521|ref|YP_003716700.1| putative DNA replication and repair protein [Croceibacter atlanticus HTCC2559] gi|83848444|gb|EAP86313.1| putative DNA replication and repair protein [Croceibacter atlanticus HTCC2559] Length = 359 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E + EF + + G NG GK+++ ++I L G + Sbjct: 1 MHLKQLSLINYKNF-ESETFEFDSKINCLVGANGIGKTNVLDSIYHLSLGKS 51 >gi|299535189|ref|ZP_07048513.1| nuclease sbcCD subunit C [Lysinibacillus fusiformis ZC1] gi|298729310|gb|EFI69861.1| nuclease sbcCD subunit C [Lysinibacillus fusiformis ZC1] Length = 1026 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + I+ F + + + I+F + L ++G+ G GK+++ +AI + YG Sbjct: 1 MKPLKLTITAFGPYKDTEVIDFQELGEHRLFAISGKTGAGKTTIFDAICYALYGSGSGED 60 Query: 83 HGDSIKKRS 91 D+ RS Sbjct: 61 RQDTALLRS 69 >gi|320093509|ref|ZP_08025406.1| SMC domain protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319979554|gb|EFW11019.1| SMC domain protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 404 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + ++++R F IEF D V G N GK++L A+ +L G RR Sbjct: 1 MKLTHVSLTNWRNFG---HIEFDLDSRLFVVGPNSSGKTNLLGALRFL--GDIARRG 52 >gi|315656144|ref|ZP_07909035.1| nuclease [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493146|gb|EFU82746.1| nuclease [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 1058 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K + + F E ++ L ++ G+ G GKS++ + I + YG Sbjct: 1 MKFHRLTLEGVGSFYERTTLDLDTLAESGLFLITGKTGSGKSTILDGIVYALYGDVA 57 >gi|315655929|ref|ZP_07908827.1| nuclease [Mobiluncus curtisii ATCC 51333] gi|315489993|gb|EFU79620.1| nuclease [Mobiluncus curtisii ATCC 51333] Length = 1058 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K + + F E ++ L ++ G+ G GKS++ + I + YG Sbjct: 1 MKFHRLTLEGVGSFYERTTLDLDTLAESGLFLITGKTGSGKSTILDGIVYALYGDVA 57 >gi|255030895|ref|ZP_05302846.1| exonuclease, SbcC family protein [Listeria monocytogenes LO28] Length = 153 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + + + F + + + I+F + + +++G+ G GKS++ +AI + +G Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD 60 Query: 83 HGDSIKKRSIKTPMPM 98 + T + Sbjct: 61 RESFSMRSHFATDKEI 76 >gi|298345524|ref|YP_003718211.1| ATP-dependent dsDNA exonuclease SbcC [Mobiluncus curtisii ATCC 43063] gi|298235585|gb|ADI66717.1| ATP-dependent dsDNA exonuclease SbcC [Mobiluncus curtisii ATCC 43063] Length = 1058 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K + + F E ++ L ++ G+ G GKS++ + I + YG Sbjct: 1 MKFHRLTLEGVGSFYERTTLDLDTLAESGLFLITGKTGSGKSTILDGIVYALYGDVA 57 >gi|313231327|emb|CBY08442.1| unnamed protein product [Oikopleura dioica] Length = 1335 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 26 IFKLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + L I+IS R +I+F T+++GQNG GK+++ E +++ G Sbjct: 1 MVFLKTIKISGIRSIGPGEEHEVEIKFQRPFTLISGQNGAGKTTIIECLKYATSGS 56 >gi|312375227|gb|EFR22641.1| hypothetical protein AND_14406 [Anopheles darlingi] Length = 854 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L +E+ +F + IEF + ++ G+NG GKS++ A+ + G S+ Sbjct: 22 KVLRMELKNFMCHRHLV-IEFNKSVNLLVGKNGSGKSAIVAALTVGLGCNAMQTNRGSSL 80 Query: 88 KKR 90 K Sbjct: 81 KDL 83 >gi|300856330|ref|YP_003781314.1| phage-like protein [Clostridium ljungdahlii DSM 13528] gi|300436445|gb|ADK16212.1| phage-related protein [Clostridium ljungdahlii DSM 13528] Length = 661 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F+G E+ I+F ++ T + G NG GK+++ +A WL + + ++ Sbjct: 7 LKGLYLKNFKGIKELD-IDF-ENTTNIYGDNGTGKTTVFDAFAWLLFDKDSQNISKFDVQ 64 >gi|228472099|ref|ZP_04056865.1| DNA repair protein RecN [Capnocytophaga gingivalis ATCC 33624] gi|228276302|gb|EEK15026.1| DNA repair protein RecN [Capnocytophaga gingivalis ATCC 33624] Length = 552 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F E KI F+ TI+ G+ G GKS L +A+ + Sbjct: 2 LQSLAIKNF-ALIEDIKIHFSKGFTIITGETGSGKSILLDALALVLG 47 >gi|169786935|ref|YP_001708747.1| hypothetical protein p3ABAYE0061 [Acinetobacter baumannii AYE] gi|260556828|ref|ZP_05829045.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|293611315|ref|ZP_06693612.1| predicted protein [Acinetobacter sp. SH024] gi|169147096|emb|CAM84754.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|260409434|gb|EEX02735.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|292826326|gb|EFF84694.1| predicted protein [Acinetobacter sp. SH024] Length = 651 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + KL +IEI ++ FT Q I + +T++ G N GK+S+ E + Sbjct: 1 MIKLKNIEILKYKSFTTPQSINIEEDITVLVGMNESGKTSVLECL 45 >gi|67526323|ref|XP_661223.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4] gi|40740637|gb|EAA59827.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4] gi|259481852|tpe|CBF75760.1| TPA: subunit of MRX complex (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1319 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 21 LTHIAIFSVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 70 >gi|295980932|emb|CBJ57180.1| putative DNA helicase associated protein [Streptococcus pneumoniae] Length = 689 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL + I++FR F E Q IE + ++ G N GK+++ +A+ Sbjct: 1 MKLTKVIINNFRSFGESQIIELNNQPVLI-GNNSSGKTTVLQAL 43 >gi|56752057|ref|YP_172758.1| chromosome segregation protein SMC1 [Synechococcus elongatus PCC 6301] gi|56687016|dbj|BAD80238.1| chromosome segregation protein SMC1 [Synechococcus elongatus PCC 6301] Length = 1167 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 54 IVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 +V G NG GKS++ +A+ + + + D + T Sbjct: 1 MVTGPNGSGKSNILDALLFALGLSSSKGMRADRLPDLVNST 41 >gi|317131012|ref|YP_004090326.1| DNA replication and repair protein RecF [Ethanoligenens harbinense YUAN-3] gi|315468991|gb|ADU25595.1| DNA replication and repair protein RecF [Ethanoligenens harbinense YUAN-3] Length = 375 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR E +E + I GQN GK++L EAI WLF G R DS Sbjct: 3 VHRLSLQGFRNL-EQTVLEPDPSVNIFYGQNAQGKTNLLEAI-WLFTGARSFRGAKDS 58 >gi|269103822|ref|ZP_06156519.1| DNA recombination and repair protein RecF [Photobacterium damselae subsp. damselae CIP 102761] gi|268163720|gb|EEZ42216.1| DNA recombination and repair protein RecF [Photobacterium damselae subsp. damselae CIP 102761] Length = 360 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L + + FR + +E + + G NG GK+S+ EA+ +L +G + R G Sbjct: 1 MALTRLIVKDFRNIADCD-LELSPSFNFLIGANGSGKTSVLEAVHYLGHGRSFRSHLTGR 59 Query: 86 SIKKRSIK 93 I+ + Sbjct: 60 VIRHEQSE 67 >gi|262201419|ref|YP_003272627.1| ATPase [Gordonia bronchialis DSM 43247] gi|262084766|gb|ACY20734.1| ATPase [Gordonia bronchialis DSM 43247] Length = 597 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I F+ +IEF+ +T + G NG K+++ A++ G Sbjct: 22 IHYIRFPRFKNLATDLRIEFSHPITAIVGPNGCNKTAILRALQGAPRGN 70 >gi|159119524|ref|XP_001709980.1| SMC3-like protein [Giardia lamblia ATCC 50803] gi|157438098|gb|EDO82306.1| SMC3-like protein [Giardia lamblia ATCC 50803] Length = 1231 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 19/48 (39%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI +FR + + G NG GKS+ AI + Sbjct: 1 MYLSGVEIKNFRSIVHTSVTGLHPGINVFIGINGAGKSNFYSAILFAL 48 >gi|153853414|ref|ZP_01994823.1| hypothetical protein DORLON_00812 [Dorea longicatena DSM 13814] gi|149754200|gb|EDM64131.1| hypothetical protein DORLON_00812 [Dorea longicatena DSM 13814] Length = 435 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI + + ++ + LTIV G N GK+S+ ++I W G + Sbjct: 5 IKINKLEIENVKRIKAVKIEPTKNGLTIVGGNNNQGKTSVLDSIAWALGGDRYK 58 >gi|70946900|ref|XP_743118.1| DNA repair protein RAD50 [Plasmodium chabaudi chabaudi] gi|56522461|emb|CAH80533.1| DNA repair protein RAD50, putative [Plasmodium chabaudi chabaudi] Length = 346 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I I R + + Q++EF+ +TI+ G NG GKS++ E ++ Sbjct: 4 LDKIGIQGIRSYCDEYAQQLEFSSPITIIYGNNGSGKSTIIECLK 48 >gi|312171526|emb|CBX79784.1| Nuclease sbcCD subunit C [Erwinia amylovora ATCC BAA-2158] Length = 1120 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGSGKTTLLDAICLALYHETPR 60 >gi|326783309|ref|YP_004323745.1| recombination endonuclease subunit [Prochlorococcus phage Syn33] gi|310005256|gb|ADO99645.1| recombination endonuclease subunit [Prochlorococcus phage Syn33] Length = 573 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + +I+F T++ G NG GKS++ +A+ + +G R+ + Sbjct: 1 MITFETIRWKNFLSTGDQWTEIDFCESSSTLIVGSNGAGKSTMLDALCFALFGKAFRKIN 60 Query: 84 GDSIKKR--SIKTPMPMCMAVPRCKYQL 109 + + + ++ + +Y++ Sbjct: 61 KPQLVNSINEKDAKVEVTFSIGKEEYRV 88 >gi|292487422|ref|YP_003530294.1| Nuclease sbcCD subunit C [Erwinia amylovora CFBP1430] gi|292898666|ref|YP_003538035.1| exonuclease [Erwinia amylovora ATCC 49946] gi|291198514|emb|CBJ45622.1| exonuclease [Erwinia amylovora ATCC 49946] gi|291552841|emb|CBA19886.1| Nuclease sbcCD subunit C [Erwinia amylovora CFBP1430] Length = 1120 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGSGKTTLLDAICLALYHETPR 60 >gi|308798817|ref|XP_003074188.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri] gi|116000360|emb|CAL50040.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri] Length = 1313 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 31 DIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I R F+ I+F LT++ G+NG GK+++ E ++ Sbjct: 6 KLLIKGIRSFSPDNEHVIQFPKPLTLIVGRNGAGKTTVIECLK 48 >gi|30173370|sp|Q9ERA5|SMC4_MICAR RecName: Full=Structural maintenance of chromosomes protein 4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome-associated polypeptide C; AltName: Full=XCAP-C homolog gi|10241748|emb|CAC09583.1| putative SMC4 protein [Microtus arvalis] Length = 1243 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +F+ + + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 39 ITHIVNQNFKSCAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 97 >gi|331007623|ref|ZP_08330765.1| DNA recombination and repair protein RecF [gamma proteobacterium IMCC1989] gi|330418563|gb|EGG93087.1| DNA recombination and repair protein RecF [gamma proteobacterium IMCC1989] Length = 378 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I H R E IE + + I G NG GK+S+ EA+ + G + R S+ Sbjct: 4 LKTLSIQHLRNLNE-VSIELSHKINIFYGDNGSGKTSILEAVALVGLGRSFRSHKTRSLV 62 Query: 89 KRSIKT 94 Sbjct: 63 NHQQTQ 68 >gi|86170605|ref|XP_966048.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7] gi|259551807|sp|C6KSQ6|RAD50_PLAF7 RecName: Full=Probable DNA repair protein RAD50 gi|46362290|emb|CAG25228.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7] Length = 2236 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I R + + + +EFA +TI+ G NG GKS++ E ++ G Sbjct: 4 LEKIGIQGIRSYNDEDVEILEFATPITIIYGNNGSGKSTIIECLKVSCTG 53 >gi|238793145|ref|ZP_04636773.1| DNA replication and repair protein recF [Yersinia intermedia ATCC 29909] gi|238727518|gb|EEQ19044.1| DNA replication and repair protein recF [Yersinia intermedia ATCC 29909] Length = 370 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 10 MALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGR 68 Query: 87 IKK 89 + + Sbjct: 69 VIR 71 >gi|284007065|emb|CBA72340.1| dna replication and repair protein [Arsenophonus nasoniae] Length = 362 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MMLSRLLIRDFRNI-ESADLSLATGFNFLIGPNGSGKTSILEAIYTLGHGRAFRSIQAAR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|200388167|ref|ZP_03214779.1| RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|12719019|gb|AAK02041.1|AF261825_10 putative exonuclease [Salmonella enterica subsp. enterica serovar Typhimurium] gi|199605265|gb|EDZ03810.1| RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 641 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHGD 85 KL I IS+F+ F +++T + G NG GK++ +A+ + + RR Sbjct: 1 MKLHSIRISNFQSFGAEPIELTLENITYLIGPNGSGKTAALQALCRLFAFDPSLRRIQRS 60 Query: 86 SIKKRSIKTPMP 97 + P Sbjct: 61 DFHVPHDEQEAP 72 >gi|284031703|ref|YP_003381634.1| DNA repair ATPase-like protein [Kribbella flavida DSM 17836] gi|283810996|gb|ADB32835.1| ATPase-like protein involved in DNA repair [Kribbella flavida DSM 17836] Length = 926 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + + +FRG T+ + T+V G N GKSSL EA +F Sbjct: 1 MRLHSLTLRNFRGVTDRTVRLPSIGTTVVVGDNEVGKSSLVEAFALVFD 49 >gi|198275605|ref|ZP_03208136.1| hypothetical protein BACPLE_01774 [Bacteroides plebeius DSM 17135] gi|198271234|gb|EDY95504.1| hypothetical protein BACPLE_01774 [Bacteroides plebeius DSM 17135] Length = 396 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L I I +++ E ++ F+ + + G+NG GK++L +A+ +L + + Sbjct: 22 VFMWLKRISILNYKNL-EQAELAFSRKMNCIIGKNGMGKTNLMDAVYYLSFCKSATNPID 80 Query: 85 DSIKKRSIK 93 + Sbjct: 81 SQNIRHEQD 89 >gi|120537708|gb|AAI29315.1| Smc4 protein [Danio rerio] Length = 481 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + + + Q + F + + G NG GKS++ +++ ++F GY ++ + Sbjct: 83 ITHIVNRNLKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVF-GYRAQKIRSKKL 141 >gi|332673215|gb|AEE70032.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 381 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEAL-YCLVGKS 49 >gi|330504719|ref|YP_004381588.1| SMC domain-containing protein [Pseudomonas mendocina NK-01] gi|328919005|gb|AEB59836.1| SMC domain-containing protein [Pseudomonas mendocina NK-01] Length = 1144 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRLKNLNSLKGEWKIDFATEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 >gi|317473713|ref|ZP_07933000.1| phosphoesterase [Anaerostipes sp. 3_2_56FAA] gi|316898834|gb|EFV20861.1| phosphoesterase [Anaerostipes sp. 3_2_56FAA] Length = 793 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 F + +I I F F + + F L IV G N GK+++ E I + +G + R Sbjct: 361 FYIRNIYIDGFGKFCGKE-LSFVPGLNIVYGPNESGKTTIKEFIVHMLFGLEKSRG 415 >gi|283835675|ref|ZP_06355416.1| DNA repair protein RecN [Citrobacter youngae ATCC 29220] gi|291068890|gb|EFE06999.1| DNA repair protein RecN [Citrobacter youngae ATCC 29220] Length = 553 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F + +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQNGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|227873173|ref|ZP_03991464.1| recombination protein RecF [Oribacterium sinus F0268] gi|227841004|gb|EEJ51343.1| recombination protein RecF [Oribacterium sinus F0268] Length = 360 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ ++R E K+ + I+ G N GK++L EAI + G + R + Sbjct: 3 IESIELQNYRNI-EKLKLPLGEKNNILYGDNAQGKTNLLEAIFFGSTGKSFRFCKDKELI 61 Query: 89 KRSIK 93 + Sbjct: 62 HFGAE 66 >gi|167747849|ref|ZP_02419976.1| hypothetical protein ANACAC_02578 [Anaerostipes caccae DSM 14662] gi|167652744|gb|EDR96873.1| hypothetical protein ANACAC_02578 [Anaerostipes caccae DSM 14662] Length = 793 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 F + +I I F F + + F L IV G N GK+++ E I + +G + R Sbjct: 361 FYIRNIYIDGFGKFCGKE-LSFVPGLNIVYGPNESGKTTIKEFIVHMLFGLEKSRG 415 >gi|164662000|ref|XP_001732122.1| hypothetical protein MGL_0715 [Malassezia globosa CBS 7966] gi|159106024|gb|EDP44908.1| hypothetical protein MGL_0715 [Malassezia globosa CBS 7966] Length = 1113 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +F I + + G NG GKS++ AI G G S+K Sbjct: 110 IERVDMINFMCHR-NLSIGLGPRINFIIGHNGSGKSAILTAITIALGGKATTTSRGSSLK 168 Query: 89 K 89 Sbjct: 169 D 169 >gi|115446227|ref|NP_001046893.1| Os02g0497500 [Oryza sativa Japonica Group] gi|41056568|gb|AAP34688.2| DNA repair-recombination protein [Oryza sativa Japonica Group] gi|113536424|dbj|BAF08807.1| Os02g0497500 [Oryza sativa Japonica Group] Length = 1316 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|323496929|ref|ZP_08101957.1| recombination protein F [Vibrio sinaloensis DSM 21326] gi|323318003|gb|EGA70986.1| recombination protein F [Vibrio sinaloensis DSM 21326] Length = 360 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR E I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLTRLIIKQFRNI-EACDINLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|317485204|ref|ZP_07944085.1| exonuclease SbcC [Bilophila wadsworthia 3_1_6] gi|316923495|gb|EFV44700.1| exonuclease SbcC [Bilophila wadsworthia 3_1_6] Length = 1232 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L I + I+ +D + ++ G G GK+++ +A+ YG T R Sbjct: 1 MRILQIRFKNLNSLAGEWAIDLTHPAFLSDGIFVITGPTGAGKTTILDAVCLALYGRTPR 60 >gi|227498018|ref|ZP_03928193.1| exonuclease [Actinomyces urogenitalis DSM 15434] gi|226832569|gb|EEH64952.1| exonuclease [Actinomyces urogenitalis DSM 15434] Length = 1070 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--R 80 +L + ++ + + I+F ++ G G GK+++ +AI + YG + Sbjct: 1 MRLHRLTMTAVGPYPGTEVIDFDRFAASGRFLLTGPTGAGKTTIIDAIVFALYGDVAGDK 60 Query: 81 RKHGDSIKKR----SIKTPMPMCMAVPRCKYQLK 110 D I+ R +T + + + Y+++ Sbjct: 61 DSSKDRIRSRLAGPGTETVVELVFSTSAGTYRVR 94 >gi|254507276|ref|ZP_05119412.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus 16] gi|219549736|gb|EED26725.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus 16] Length = 360 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR E I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLTRLIIKQFRNI-EACDINLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|20803919|emb|CAD31497.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A] Length = 670 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L I+++R + IE + TI+ G N GKS+L +A++ Sbjct: 1 MRLKKARITNYRSVKDSGSIELEPNKTILVGPNEAGKSALLKALQ 45 >gi|269925812|ref|YP_003322435.1| SMC domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789472|gb|ACZ41613.1| SMC domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 618 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVN-GQNGYGKSSLSEAIEWLFYGY 77 + L +++I++F+ + I F TI+ G N GKS+L EAI + YG Sbjct: 1 MITLGELQITNFKRIRSLC-ITFPRQGTILVEGPNESGKSTLFEAIYFALYGQ 52 >gi|218190791|gb|EEC73218.1| hypothetical protein OsI_07303 [Oryza sativa Indica Group] Length = 1323 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|195068516|ref|XP_001996924.1| GH23715 [Drosophila grimshawi] gi|193891380|gb|EDV90246.1| GH23715 [Drosophila grimshawi] Length = 1035 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L+ ++ + F ++EI ++L ++ G NG GKS++ AI G Q K Sbjct: 11 QLVGRIKSVYCKDFVSYSEITFFP-KEYLNVLTGPNGTGKSTIVSAIILGLGGEPQLLKR 69 Query: 84 GDSIKK 89 SI Sbjct: 70 SSSISD 75 >gi|18312382|ref|NP_559049.1| partial recF-like protein [Pyrobaculum aerophilum str. IM2] gi|18159834|gb|AAL63231.1| partial recF homolog [Pyrobaculum aerophilum str. IM2] Length = 91 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L F + I +F+ +++ + ++ G N GK+++ EAI Sbjct: 2 ELYFYPETLLIENFKSIR-RLELKLRPGVNLLVGPNASGKTNILEAI 47 >gi|227114388|ref|ZP_03828044.1| SMC protein-like protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 254 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +++KI F +T + G+NG GKS+L EA+ Sbjct: 33 NDLEKIRFHPDVTFLVGENGSGKSTLLEAVAIAMG 67 >gi|197120424|ref|YP_002132375.1| DNA replication and repair protein RecF [Anaeromyxobacter sp. K] gi|226737767|sp|B4UJV1|RECF_ANASK RecName: Full=DNA replication and repair protein recF gi|196170273|gb|ACG71246.1| DNA replication and repair protein RecF [Anaeromyxobacter sp. K] Length = 372 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL + + FR + + T++ G+NG GK++L EAI +L R Sbjct: 1 MKLLSLHVQDFRNLAAVALAP-SPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVRLAE 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LVRFGADQ 67 >gi|153002882|ref|YP_001377207.1| DNA replication and repair protein RecF [Anaeromyxobacter sp. Fw109-5] gi|166220696|sp|A7H677|RECF_ANADF RecName: Full=DNA replication and repair protein recF gi|152026455|gb|ABS24223.1| DNA replication and repair protein RecF [Anaeromyxobacter sp. Fw109-5] Length = 369 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL + + FR +++ + + T++ G+NG GK++L EAI +L R Sbjct: 1 MKLLSLAVQDFRNLAQVELLP-SPRATVLLGENGQGKTNLLEAIYFLTTLKPLRTARLAE 59 Query: 87 IKKRSIKT 94 + + +T Sbjct: 60 LVRHGAQT 67 >gi|50120047|ref|YP_049214.1| exonuclease [Pectobacterium atrosepticum SCRI1043] gi|49610573|emb|CAG74018.1| exonuclease [Pectobacterium atrosepticum SCRI1043] Length = 1227 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 81 -----RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 + D + + + + + V Y+ Sbjct: 61 LGQLSAGNNDLMTRNTAECLAEVEFEVKGVGYR 93 >gi|329297612|ref|ZP_08254948.1| recombination and repair protein [Plautia stali symbiont] Length = 553 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHRGMTAITGETGAGKSIAIDALGLCLGGRAEAGM 54 >gi|298489367|ref|ZP_07007380.1| hypothetical protein PSA3335_4850 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156097|gb|EFH97204.1| hypothetical protein PSA3335_4850 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 313 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I + +F+ F + Q ++ A +T++ G N GKSSL +A+ Sbjct: 5 ISVENFKSFAKKQSVKLAP-ITLIYGPNSSGKSSLIQAL 42 >gi|196229263|ref|ZP_03128128.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428] gi|196226495|gb|EDY21000.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428] Length = 625 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I GF + +I+ A L + G G GK+++ E I + +R + Sbjct: 8 QLKSLSIIG--GFLDGVRIDLATGLNCIIGARGTGKTTILELIRYAMDALPRREVAASAR 65 Query: 88 KK 89 K+ Sbjct: 66 KR 67 >gi|147834715|emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera] Length = 244 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|15643303|ref|NP_228347.1| hypothetical protein TM0537 [Thermotoga maritima MSB8] gi|4981051|gb|AAD35622.1|AE001729_2 hypothetical protein TM_0537 [Thermotoga maritima MSB8] Length = 758 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F F E L I+ G N GK++L+ I + G Sbjct: 1 MKIERVHVEGFGKF-ENFSFPLKSGLNIIFGGNAAGKTTLANFIRYCLTG 49 >gi|28211237|ref|NP_782181.1| DNA repair protein recN [Clostridium tetani E88] gi|28203677|gb|AAO36118.1| DNA repair protein recN [Clostridium tetani E88] Length = 565 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F +++G+ G GKS + +AI ++ G + Sbjct: 2 LLQLNIKNF-ALIEELSISFERGFNVLSGETGAGKSIIIDAINYVLGGKFNKEL 54 >gi|187930242|ref|YP_001900729.1| SMC domain-containing protein [Ralstonia pickettii 12J] gi|187727132|gb|ACD28297.1| SMC domain protein [Ralstonia pickettii 12J] Length = 634 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI--EWLFYGYTQRRKHG 84 KL I +S+F+ F E + +T + G NG GK++ +A+ + F +R Sbjct: 1 MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRS 60 Query: 85 DSIKKRSIKTP 95 D + + P Sbjct: 61 DFYVPFNEEAP 71 >gi|288870351|ref|ZP_06409727.1| putative exonuclease SbcC [Clostridium hathewayi DSM 13479] gi|288867492|gb|EFC99790.1| putative exonuclease SbcC [Clostridium hathewayi DSM 13479] Length = 345 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K + +S + + +++ +F L +V+G G GK+++ + I + YG Sbjct: 1 MKPTSLVLSGWGPYRGVEQADFETMQQGLFLVSGPTGSGKTTIFDGITFALYGEVSGSIR 60 Query: 84 -GDSIKKRSIKTPMP 97 DS++ P Sbjct: 61 EKDSLRSDFADASTP 75 >gi|222081488|ref|YP_002540851.1| hypothetical protein Arad_7840 [Agrobacterium radiobacter K84] gi|221726167|gb|ACM29256.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 598 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +++ + I +FRG ++ I F D T++ G N GKS++ EAIE R Sbjct: 1 MRIVRVHIENFRGI-KLADIYF-DGTTVLLGDNNTGKSTVFEAIELAIGADRLAR 53 >gi|218698029|ref|YP_002405696.1| putative ATPase involved in DNA thiolation [Escherichia coli 55989] gi|218354761|emb|CAV01839.1| putative ATPase involved in DNA thiolation [Escherichia coli 55989] Length = 682 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 13/86 (15%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEA 69 + ARK + + + +FR F I+ A + + G NG GK+S+ A Sbjct: 10 WSARKTNVLIKQLVLHNFRVFNGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSA 69 Query: 70 IEWLFYGYTQRRK---HGDSIKKRSI 92 I YG D I+ S Sbjct: 70 IRLALYGRLAFGLATQQQDYIEHLSS 95 >gi|153874843|ref|ZP_02002905.1| ATP-binding protein [Beggiatoa sp. PS] gi|152068693|gb|EDN67095.1| ATP-binding protein [Beggiatoa sp. PS] Length = 343 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ D+ I++F F E + F + + ++ G NG GK+ +A+ Sbjct: 1 MKIKDLSITNFTAF-EQAQFNFCEGINVLIGANGTGKTHAMKAM 43 >gi|145597327|ref|YP_001161402.1| recombination protein F [Yersinia pestis Pestoides F] gi|145209023|gb|ABP38430.1| DNA replication and repair protein RecF [Yersinia pestis Pestoides F] Length = 425 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 63 RISFMALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSL 121 Query: 83 HGDSIKK 89 + + Sbjct: 122 QAGRVIR 128 >gi|120436824|ref|YP_862510.1| hypothetical protein GFO_2487 [Gramella forsetii KT0803] gi|117578974|emb|CAL67443.1| conserved hypothetical protein [Gramella forsetii KT0803] Length = 674 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + +F+G ++ +F T + G N GK+++ +A WL +G DS Sbjct: 4 IQIKSLILRNFKGIKNLKIEDFQKE-TSIWGANATGKTTIVDAFSWLLFG-------KDS 55 Query: 87 IKKRS--IKTPMPMCMAVPRCKYQLK 110 + + IKT +P+ ++++ Sbjct: 56 TDRTNFEIKTLDKNNQVIPKIDHEVE 81 >gi|148656558|ref|YP_001276763.1| DNA replication and repair protein RecF [Roseiflexus sp. RS-1] gi|148568668|gb|ABQ90813.1| DNA replication and repair protein RecF [Roseiflexus sp. RS-1] Length = 398 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E + + ++ G N GK+++ EAI +L + R Sbjct: 5 MHVSHLSLRDFRNY-ERLDLTLEPGVILLYGPNAAGKTTVLEAIYFLATTRSPRAGADRE 63 Query: 87 IKK 89 + + Sbjct: 64 LVR 66 >gi|21961124|gb|AAM87653.1|AE014012_10 ssDNA and dsDNA binding protein [Yersinia pestis KIM 10] gi|45438596|gb|AAS64142.1| DNA metabolism protein [Yersinia pestis biovar Microtus str. 91001] Length = 440 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 76 RISFMALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSL 134 Query: 83 HGDSIKK 89 + + Sbjct: 135 QAGRVIR 141 >gi|108810131|ref|YP_654047.1| recombination protein F [Yersinia pestis Antiqua] gi|108814113|ref|YP_649880.1| recombination protein F [Yersinia pestis Nepal516] gi|167401621|ref|ZP_02307115.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|51591507|emb|CAH23179.1| DNA metabolism protein [Yersinia pseudotuberculosis IP 32953] gi|108777761|gb|ABG20280.1| DNA replication and repair protein RecF [Yersinia pestis Nepal516] gi|108782044|gb|ABG16102.1| DNA replication and repair protein RecF [Yersinia pestis Antiqua] gi|167049003|gb|EDR60411.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 427 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 63 RISFMALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSL 121 Query: 83 HGDSIKK 89 + + Sbjct: 122 QAGRVIR 128 >gi|312883728|ref|ZP_07743449.1| exonuclease SbcC [Vibrio caribbenthicus ATCC BAA-2122] gi|309368611|gb|EFP96142.1| exonuclease SbcC [Vibrio caribbenthicus ATCC BAA-2122] Length = 1015 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GDSIK 88 + F F + ++F + ++NG G GK+S+ +A+ + YG T + G ++ Sbjct: 1 MQAFGPFASKEVVDFQALGTHPIFLINGPTGAGKTSILDALCFALYGETTSNERLGSHMR 60 Query: 89 KRSIKTPMP 97 +P Sbjct: 61 SDQAAINVP 69 >gi|237736250|ref|ZP_04566731.1| DNA replication and repair protein recF [Fusobacterium mortiferum ATCC 9817] gi|229421598|gb|EEO36645.1| DNA replication and repair protein recF [Fusobacterium mortiferum ATCC 9817] Length = 365 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++L+I +FR + ++F L + G+NG GK+SL EA+ + G + R + Sbjct: 1 MEILEINYINFRNLIDG-SVKFFPKLNLFFGKNGQGKTSLLEAVYFNATGKSFRTSKANE 59 Query: 87 IKKRSIK 93 + K +K Sbjct: 60 MMKYGVK 66 >gi|220906702|ref|YP_002482013.1| DNA repair protein RecN [Cyanothece sp. PCC 7425] gi|219863313|gb|ACL43652.1| DNA repair protein RecN [Cyanothece sp. PCC 7425] Length = 595 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK----HG 84 L+ + I +F + ++EFA L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LISLRIENF-ALIDRLELEFAPGLNVLTGETGAGKSIILDAIDIVLGGKVSSRVLRTGRE 60 Query: 85 DSIKKRSIKTPMPM 98 ++ + S K + Sbjct: 61 RALLEASFKLTREL 74 >gi|160932421|ref|ZP_02079811.1| hypothetical protein CLOLEP_01256 [Clostridium leptum DSM 753] gi|156868380|gb|EDO61752.1| hypothetical protein CLOLEP_01256 [Clostridium leptum DSM 753] Length = 368 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + +R E + I + ++ G N GK++L EA+ G + R Sbjct: 1 MKVNRLGFRDYRNLKENELIP-GPQVNVICGDNAQGKTNLLEAVWLFTGGRSFRGARDQE 59 Query: 87 IKKRSIK 93 + S + Sbjct: 60 LIAFSSR 66 >gi|190895614|ref|YP_001985906.1| hypothetical protein RHECIAT_PA0000299 [Rhizobium etli CIAT 652] gi|190699559|gb|ACE93643.1| hypothetical protein RHECIAT_PA0000299 [Rhizobium etli CIAT 652] Length = 648 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKHG 84 L ++ I FR T+ ++ + ++ G+N GK++L +A+ + + R Sbjct: 1 MYLSEVSIKDFRVLTDF-RLRLNPGINLIVGENNSGKTALVDALRYALSVNSGEWTRVQD 59 Query: 85 DSIKK 89 ++ Sbjct: 60 RDFRR 64 >gi|225450013|ref|XP_002272410.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736324|emb|CBI24962.3| unnamed protein product [Vitis vinifera] Length = 1051 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +IE+ +F F ++ K + L +V G NG GKSSL AI G Q SI Sbjct: 23 ITEIELHNFMTFNDL-KCKPGSRLNLVIGPNGSGKSSLVCAIALGLGGDPQLLGRASSI 80 >gi|153952774|ref|YP_001393539.1| exonuclease, sbcC related [Clostridium kluyveri DSM 555] gi|219853440|ref|YP_002470562.1| hypothetical protein CKR_0097 [Clostridium kluyveri NBRC 12016] gi|146345655|gb|EDK32191.1| Predicted exonuclease, sbcC related [Clostridium kluyveri DSM 555] gi|219567164|dbj|BAH05148.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 1164 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + ++I F Q+I+F + + G G GKS++ + I YG R+ Sbjct: 1 MKPISLKIKGLNSFESSQEIDFEKLTERGIFGIFGPTGSGKSTVLDGITLSLYGEVARK 59 >gi|2687853|emb|CAA99729.1| RAD50 homologue hsRAD50 [Homo sapiens] Length = 1318 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 31 DIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F + Q I F LTI+ G NG GK+++ E ++++ G Sbjct: 12 KMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTG 61 >gi|23014791|ref|ZP_00054591.1| COG1195: Recombinational DNA repair ATPase (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 174 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + ++E ++ G NG GK+++ EA+ +L G RR I Sbjct: 17 VRRLSLADFRCYG-TLRLETDARPVVLTGPNGAGKTNILEALSFLVPGRGLRRAGAGDIT 75 Query: 89 KRSIKTPMPMCMA 101 + + P +A Sbjct: 76 RHGLPAGSPWAVA 88 >gi|239996155|ref|ZP_04716679.1| exonuclease SbcC [Alteromonas macleodii ATCC 27126] Length = 745 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MRILTLRLKNLNALKGEWKIDFTHSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|332140302|ref|YP_004426040.1| exonuclease SbcC [Alteromonas macleodii str. 'Deep ecotype'] gi|327550324|gb|AEA97042.1| exonuclease SbcC [Alteromonas macleodii str. 'Deep ecotype'] Length = 1241 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MRILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|326332586|ref|ZP_08198854.1| hypothetical protein NBCG_04030 [Nocardioidaceae bacterium Broad-1] gi|325949587|gb|EGD41659.1| hypothetical protein NBCG_04030 [Nocardioidaceae bacterium Broad-1] Length = 635 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 6/83 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ +EI+ FR LT G N GK++L +A+ W G R Sbjct: 1 MRVSRVEITGFRRLA-RTGTSIDGPLTAFVGFNEAGKTTLLDALTWFTDGGAISR----- 54 Query: 87 IKKRSIKTPMPMCMAVPRCKYQL 109 I + P V + Y+L Sbjct: 55 IDYNRSRPPEEGTTKVVKVFYEL 77 >gi|325968996|ref|YP_004245188.1| hypothetical protein VMUT_1481 [Vulcanisaeta moutnovskia 768-28] gi|323708199|gb|ADY01686.1| hypothetical protein VMUT_1481 [Vulcanisaeta moutnovskia 768-28] Length = 327 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + E I D + ++ G NG GKS++ A+ + Sbjct: 5 ELTLIGIGPIAEEATISITDGIVLLYGPNGAGKSTIMRALAYAL 48 >gi|171914145|ref|ZP_02929615.1| hypothetical protein VspiD_23240 [Verrucomicrobium spinosum DSM 4136] Length = 557 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L +EI +F+ F E +E +V G NG GKSSL W Y + Sbjct: 4 RLHRLEIRNFKAFREPFTLELEGRHLLVYGSNGSGKSSLY----WALYTF 49 >gi|121595268|ref|YP_987164.1| hypothetical protein Ajs_2952 [Acidovorax sp. JS42] gi|120607348|gb|ABM43088.1| hypothetical protein Ajs_2952 [Acidovorax sp. JS42] Length = 683 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + IE+ +F+ + + Q EF ++ ++ G NGYGK+S+ EA+ YG Sbjct: 1 MWIAKIELFNFKSY-QHQLFEFPQPRAGRNIVLIGGMNGYGKTSILEALYLGLYGKEA 57 >gi|54021967|ref|YP_116209.1| recombination protein F [Nocardia farcinica IFM 10152] gi|81680365|sp|Q5Z3Z6|RECF_NOCFA RecName: Full=DNA replication and repair protein recF gi|54013475|dbj|BAD54845.1| putative recombination and repair protein [Nocardia farcinica IFM 10152] Length = 388 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + E ++E + T+ G NG GK++L EA+ +L + R Sbjct: 1 MFVRALSLRDFRSW-EHVELELSTGRTVFLGANGNGKTNLLEAVGYLATLGSHRVSADAP 59 Query: 87 IKKRSIKTPM 96 + + + Sbjct: 60 LIRSGAQRAR 69 >gi|152997963|ref|YP_001342798.1| DNA repair protein RecN [Marinomonas sp. MWYL1] gi|150838887|gb|ABR72863.1| DNA repair protein RecN [Marinomonas sp. MWYL1] Length = 556 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I IS+F E ++EF +T+++G+ G GKS + +A+ T K Sbjct: 2 LTSIAISNF-AIVESLELEFKKGMTVISGETGAGKSIMVDALSLCLGDRTDAAVVRHGQK 60 Query: 89 KRSI 92 + I Sbjct: 61 RADI 64 >gi|118443433|ref|YP_877334.1| exonuclease [Clostridium novyi NT] gi|118133889|gb|ABK60933.1| exonuclease, putative [Clostridium novyi NT] Length = 1176 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K ++IS F Q I F L + G G GKS++ +AI YG R Sbjct: 1 MKPRVLKISGLNSFEREQVINFNRLTEKGLFGIFGPTGSGKSTILDAITIALYGKITRTN 60 Query: 83 HG 84 G Sbjct: 61 KG 62 >gi|125973676|ref|YP_001037586.1| hypothetical protein Cthe_1161 [Clostridium thermocellum ATCC 27405] gi|125713901|gb|ABN52393.1| hypothetical protein Cthe_1161 [Clostridium thermocellum ATCC 27405] Length = 800 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I + RG I+ I+ G+NG GKSS+ + IE+ G Sbjct: 2 LKSINIENLRGIRFNTNIDLNKKSLIIFGENGKGKSSIVDGIEYAITG 49 >gi|328542225|ref|YP_004302334.1| SMC domain protein [polymorphum gilvum SL003B-26A1] gi|326411975|gb|ADZ69038.1| SMC domain protein [Polymorphum gilvum SL003B-26A1] Length = 573 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EI++FR + + + G GKS++ +A++ + Sbjct: 3 RIRKVEINNFRCIRSFVWYP-SAGINCLIGPGDSGKSTILDALDLCLGARRTLQFTDADF 61 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 ++ P+ + + + LK Sbjct: 62 YNLNVDEPITITLTIGALDEALK 84 >gi|257066270|ref|YP_003152526.1| hypothetical protein Apre_0777 [Anaerococcus prevotii DSM 20548] gi|256798150|gb|ACV28805.1| conserved hypothetical protein [Anaerococcus prevotii DSM 20548] Length = 617 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 + +I I F F + KI F ++ ++ G+N GKS+++ IE L YG+ + + K Sbjct: 4 VFIKEIHIISFGKFEDK-KIRFDENFNLIYGKNETGKSTVTNFIEGLLYGFDEGKNKKSF 62 Query: 86 SIKKRSIKTPM 96 S KK + K + Sbjct: 63 SYKKEAYKPKL 73 >gi|237654254|ref|YP_002890568.1| ATPase AAA [Thauera sp. MZ1T] gi|237625501|gb|ACR02191.1| AAA ATPase [Thauera sp. MZ1T] Length = 530 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L + I F+ ++ ++F + T++ GQNG GKS+L EAI +F RR Sbjct: 1 MRLDKVSIDGFKNLRGLE-LDFDERQLTTVLIGQNGAGKSNLIEAITQVFRWVDLRRNEP 59 Query: 85 DSIKKRSIKTPMPMCMAVP 103 + + + P AVP Sbjct: 60 RFHYRVTYRIQ-PQGPAVP 77 >gi|186893347|ref|YP_001870459.1| recombination protein F [Yersinia pseudotuberculosis PB1/+] gi|226737851|sp|B2JYI8|RECF_YERPB RecName: Full=DNA replication and repair protein recF gi|186696373|gb|ACC87002.1| DNA replication and repair protein RecF [Yersinia pseudotuberculosis PB1/+] Length = 361 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|168186205|ref|ZP_02620840.1| DNA repair protein RecN [Clostridium botulinum C str. Eklund] gi|169295642|gb|EDS77775.1| DNA repair protein RecN [Clostridium botulinum C str. Eklund] Length = 564 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ + Sbjct: 2 LLQLNIKNF-ALIESLTINFEKGFNVLTGETGAGKSILIDAINYVLGEKFNKSL 54 >gi|167470927|ref|ZP_02335631.1| recombination protein F [Yersinia pestis FV-1] Length = 221 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|146308553|ref|YP_001189018.1| SMC domain-containing protein [Pseudomonas mendocina ymp] gi|145576754|gb|ABP86286.1| SMC domain protein [Pseudomonas mendocina ymp] Length = 1144 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 >gi|153947001|ref|YP_001403093.1| recombination protein F [Yersinia pseudotuberculosis IP 31758] gi|166918727|sp|A7FPB5|RECF_YERP3 RecName: Full=DNA replication and repair protein recF gi|152958496|gb|ABS45957.1| DNA replication and repair protein recF [Yersinia pseudotuberculosis IP 31758] Length = 361 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|150260970|ref|ZP_01917698.1| DNA metabolism protein [Yersinia pestis CA88-4125] gi|161484720|ref|NP_671402.2| recombination protein F [Yersinia pestis KIM 10] gi|161511283|ref|NP_995265.2| recombination protein F [Yersinia pestis biovar Microtus str. 91001] gi|161760551|ref|YP_072416.2| recombination protein F [Yersinia pseudotuberculosis IP 32953] gi|162421418|ref|YP_001608446.1| recombination protein F [Yersinia pestis Angola] gi|165926115|ref|ZP_02221947.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. F1991016] gi|165936903|ref|ZP_02225469.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. IP275] gi|166009709|ref|ZP_02230607.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. E1979001] gi|166213283|ref|ZP_02239318.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. B42003004] gi|167422826|ref|ZP_02314579.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425451|ref|ZP_02317204.1| DNA replication and repair protein recF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022265|ref|YP_001718770.1| recombination protein F [Yersinia pseudotuberculosis YPIII] gi|218931072|ref|YP_002348947.1| recombination protein F [Yersinia pestis CO92] gi|229839802|ref|ZP_04459961.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841887|ref|ZP_04462043.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229896764|ref|ZP_04511927.1| gap repair protein [Yersinia pestis Pestoides A] gi|229904652|ref|ZP_04519763.1| gap repair protein [Yersinia pestis Nepal516] gi|270488363|ref|ZP_06205437.1| DNA replication and repair protein RecF [Yersinia pestis KIM D27] gi|294505623|ref|YP_003569685.1| recombination protein F [Yersinia pestis Z176003] gi|20978599|sp|Q8Z9U9|RECF_YERPE RecName: Full=DNA replication and repair protein recF gi|97181121|sp|Q663T4|RECF_YERPS RecName: Full=DNA replication and repair protein recF gi|226737852|sp|A9R5R3|RECF_YERPG RecName: Full=DNA replication and repair protein recF gi|226737853|sp|B1JGD5|RECF_YERPY RecName: Full=DNA replication and repair protein recF gi|115349683|emb|CAL22664.1| DNA metabolism protein [Yersinia pestis CO92] gi|149290378|gb|EDM40455.1| DNA metabolism protein [Yersinia pestis CA88-4125] gi|162354233|gb|ABX88181.1| DNA replication and repair protein recF [Yersinia pestis Angola] gi|165915145|gb|EDR33756.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. IP275] gi|165921975|gb|EDR39152.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. F1991016] gi|165991631|gb|EDR43932.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. E1979001] gi|166205581|gb|EDR50061.1| DNA replication and repair protein recF [Yersinia pestis biovar Antiqua str. B42003004] gi|166958218|gb|EDR55239.1| DNA replication and repair protein recF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055465|gb|EDR65258.1| DNA replication and repair protein recF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169748799|gb|ACA66317.1| DNA replication and repair protein RecF [Yersinia pseudotuberculosis YPIII] gi|229678770|gb|EEO74875.1| gap repair protein [Yersinia pestis Nepal516] gi|229691226|gb|EEO83279.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696168|gb|EEO86215.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700202|gb|EEO88238.1| gap repair protein [Yersinia pestis Pestoides A] gi|262363787|gb|ACY60508.1| recombination protein F [Yersinia pestis D106004] gi|262367724|gb|ACY64281.1| recombination protein F [Yersinia pestis D182038] gi|270336867|gb|EFA47644.1| DNA replication and repair protein RecF [Yersinia pestis KIM D27] gi|294356082|gb|ADE66423.1| recombination protein F [Yersinia pestis Z176003] gi|320017425|gb|ADW00997.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 361 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLALAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|190341579|gb|ACE74866.1| RecN [Escherichia hermannii] Length = 553 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F + +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHNGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|190341577|gb|ACE74865.1| RecN [Escherichia hermannii] Length = 553 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F + +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHNGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|255563610|ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis] gi|223538045|gb|EEF39658.1| DNA repair protein RAD50, putative [Ricinus communis] Length = 1256 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|254197330|ref|ZP_04903752.1| conserved hypothetical protein [Burkholderia pseudomallei S13] gi|169654071|gb|EDS86764.1| conserved hypothetical protein [Burkholderia pseudomallei S13] Length = 536 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +S+F+ F + ++F L ++ G N GKSS+ AI+ G + Sbjct: 21 IKKVVLSNFKKF-DTLTLDFQPDLNVLIGDNEAGKSSILLAIDLALSGSRSK 71 >gi|241661832|ref|YP_002980192.1| ATPase [Ralstonia pickettii 12D] gi|240863859|gb|ACS61520.1| ATPase [Ralstonia pickettii 12D] Length = 586 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F+ E +I+F LT + G NG GKSS+ A+ Sbjct: 35 FKNLEEGTRIDFNFPLTALVGPNGIGKSSVLHAL 68 >gi|317057226|ref|YP_004105693.1| DNA repair ATPase [Ruminococcus albus 7] gi|315449495|gb|ADU23059.1| DNA repair ATPase [Ruminococcus albus 7] Length = 924 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + F + + +I+ + L ++ G G GK+++ + + + +G Sbjct: 1 MRPLKLTVQAFGPYADRTEIDMEKLGGEGLYLITGDTGAGKTTIFDGVCYALFGKASGDI 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RSVNTFRSEY 70 >gi|300854306|ref|YP_003779290.1| putative DNA repair protein RecN [Clostridium ljungdahlii DSM 13528] gi|300434421|gb|ADK14188.1| predicted DNA repair protein RecN [Clostridium ljungdahlii DSM 13528] Length = 565 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F + +G+ G GKS L +AI ++ G + Sbjct: 2 LLQLNIKNF-ALIEKLTISFESGFNVFSGETGAGKSILIDAINYVLGGKFNKNL 54 >gi|300715549|ref|YP_003740352.1| exonuclease [Erwinia billingiae Eb661] gi|299061385|emb|CAX58495.1| Exonuclease [Erwinia billingiae Eb661] Length = 1224 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETSR 60 >gi|258507445|ref|YP_003170196.1| hypothetical protein LGG_00450 [Lactobacillus rhamnosus GG] gi|257147372|emb|CAR86345.1| Putative protein without homology [Lactobacillus rhamnosus GG] gi|259648799|dbj|BAI40961.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 696 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 27 FKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++ FR F ++F L I+ G+N GK+++ +AI+ L + Sbjct: 1 MFLKTVKLYDFRKFVSQVNGEPGLIVKFHPGLNIIVGENDSGKTAVIDAIKVLLGTVSDD 60 Query: 81 R 81 R Sbjct: 61 R 61 >gi|119503575|ref|ZP_01625658.1| recombination protein F [marine gamma proteobacterium HTCC2080] gi|119460637|gb|EAW41729.1| recombination protein F [marine gamma proteobacterium HTCC2080] Length = 376 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 10/76 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---------Y 77 F+L + I R + Q++ + +++G NG GKSS+ EA+ L G Sbjct: 8 FRLESVYIDGVRNLSA-QRLVMGSEINLISGPNGSGKSSIVEALSMLSTGRSFRSSSVRS 66 Query: 78 TQRRKHGDSIKKRSIK 93 + D I + ++ Sbjct: 67 VIQHGRDDCIVQAQVR 82 >gi|170288201|ref|YP_001738439.1| hypothetical protein TRQ2_0400 [Thermotoga sp. RQ2] gi|170175704|gb|ACB08756.1| conserved hypothetical protein [Thermotoga sp. RQ2] Length = 758 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F F E L I+ G N GK++L+ I + G Sbjct: 1 MKIERVHVEGFGKF-ENFSFPLKSGLNIIFGGNAAGKTTLANFIRYCLTG 49 >gi|156936080|ref|YP_001439996.1| recombination protein F [Cronobacter sakazakii ATCC BAA-894] gi|260595832|ref|YP_003208403.1| recombination protein F [Cronobacter turicensis z3032] gi|166220710|sp|A7MMZ8|RECF_ENTS8 RecName: Full=DNA replication and repair protein recF gi|156534334|gb|ABU79160.1| hypothetical protein ESA_03974 [Cronobacter sakazakii ATCC BAA-894] gi|260215009|emb|CBA26672.1| DNA replication and repair protein recF [Cronobacter turicensis z3032] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|146329283|ref|YP_001209128.1| DNA replication and repair protein RecF [Dichelobacter nodosus VCS1703A] gi|146232753|gb|ABQ13731.1| DNA replication and repair protein RecF [Dichelobacter nodosus VCS1703A] Length = 356 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ HFR + F L I++G+ G GK++L EA+ L G + R Sbjct: 1 MRIDSLQTQHFRHLKSAAALAFHPKLNIISGKTGSGKTALLEALYCLGRGKSFRTAQVRH 60 Query: 87 IKKRSI 92 + Sbjct: 61 MIAYQQ 66 >gi|322617251|gb|EFY14156.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619061|gb|EFY15947.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625128|gb|EFY21956.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630179|gb|EFY26950.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634395|gb|EFY31129.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635280|gb|EFY31995.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642909|gb|EFY39492.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647624|gb|EFY44111.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650570|gb|EFY46977.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656404|gb|EFY52696.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661584|gb|EFY57807.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661665|gb|EFY57884.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668221|gb|EFY64379.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672850|gb|EFY68958.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674969|gb|EFY71055.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683659|gb|EFY79672.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687735|gb|EFY83704.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192050|gb|EFZ77285.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200532|gb|EFZ85610.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204958|gb|EFZ89943.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206701|gb|EFZ91658.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211773|gb|EFZ96606.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218635|gb|EGA03342.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220036|gb|EGA04506.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224806|gb|EGA09071.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232485|gb|EGA16587.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235260|gb|EGA19345.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241048|gb|EGA25085.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241402|gb|EGA25434.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248633|gb|EGA32563.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252068|gb|EGA35928.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258628|gb|EGA42291.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262341|gb|EGA45899.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268177|gb|EGA51653.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270591|gb|EGA54036.1| recombination protein F [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|302036921|ref|YP_003797243.1| DNA repair protein RecN [Candidatus Nitrospira defluvii] gi|300604985|emb|CBK41318.1| DNA repair protein RecN [Candidatus Nitrospira defluvii] Length = 565 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ IS+F G E + F + G+ G GKS L +A+ L G R D I+ Sbjct: 2 LTELRISNF-GVIEQLAVRFGSGFIVFTGETGAGKSLLIDAVTLLVGG----RASTDQIR 56 Query: 89 KRSIKTPMPMCMAVP 103 +S + + +P Sbjct: 57 AQSDEADLEAAFVLP 71 >gi|298524781|ref|ZP_07012190.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494575|gb|EFI29869.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 841 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|290473097|ref|YP_003465958.1| gap repair protein [Xenorhabdus bovienii SS-2004] gi|289172391|emb|CBJ79158.1| gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus bovienii SS-2004] Length = 363 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR + + A + G NG GK+S+ EAI L +G R + Sbjct: 3 LSRLLIRDFRNIAD-ADLTLATGFNFLVGPNGSGKTSILEAIYTLGHGRAFRSIQAGRVI 61 Query: 89 K 89 + Sbjct: 62 R 62 >gi|288560414|ref|YP_003423900.1| RecF/RecN/SMC N terminal domain-containing protein [Methanobrevibacter ruminantium M1] gi|288543124|gb|ADC47008.1| RecF/RecN/SMC N terminal domain-containing protein [Methanobrevibacter ruminantium M1] Length = 566 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L++I+I +FR + + + F L ++ G+N GK+SL ++++ LF Sbjct: 2 LINIKIKNFRSLKDFE-MNFNPGLNVIIGENDAGKTSLIDSLKILFG 47 >gi|288932895|ref|YP_003436954.1| DNA replication and repair protein RecF [Klebsiella variicola At-22] gi|288887624|gb|ADC55942.1| DNA replication and repair protein RecF [Klebsiella variicola At-22] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|257790558|ref|YP_003181164.1| SMC domain-containing protein [Eggerthella lenta DSM 2243] gi|257474455|gb|ACV54775.1| SMC domain protein [Eggerthella lenta DSM 2243] Length = 564 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + I ++R +++ + + + + G N GKS++ A+E+L + Sbjct: 1 MKIDKLTIKNYRSVRDLE-LSLSPRINVFIGANNVGKSNILSAMEYLLGPSYPTANRLER 59 Query: 87 IKKRSIKTPMPMCMAV 102 +P+ +A+ Sbjct: 60 WDFYQGDEELPLKIAL 75 >gi|289826403|ref|ZP_06545515.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|289810862|ref|ZP_06541491.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 68 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|219557174|ref|ZP_03536250.1| hypothetical protein MtubT1_07675 [Mycobacterium tuberculosis T17] Length = 438 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|218752980|ref|ZP_03531776.1| hypothetical protein MtubG1_05830 [Mycobacterium tuberculosis GM 1503] gi|289761430|ref|ZP_06520808.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708936|gb|EFD72952.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length = 214 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|215426595|ref|ZP_03424514.1| hypothetical protein MtubT9_09472 [Mycobacterium tuberculosis T92] Length = 188 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|215403117|ref|ZP_03415298.1| hypothetical protein Mtub0_05356 [Mycobacterium tuberculosis 02_1987] gi|289745023|ref|ZP_06504401.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289685551|gb|EFD53039.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length = 875 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|213865136|ref|ZP_03387255.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 156 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|213424953|ref|ZP_03357703.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|213021784|ref|ZP_03336231.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 106 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|148245123|ref|YP_001219816.1| SbcCD related DNA repair protein [Clostridium kluyveri DSM 555] gi|219684057|ref|YP_002470439.1| hypothetical protein CKR_P29 [Clostridium kluyveri NBRC 12016] gi|146337003|gb|ABQ23614.1| SbcCD related DNA repair protein [Clostridium kluyveri DSM 555] gi|219570565|dbj|BAH08548.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 1258 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSS-LSEAIEWLFYG 76 IF+ + +E+ ++R + E +F+ + VNG NG GKSS +AI Y Sbjct: 409 IFEPVTLEVKNYRSYKEE-SFDFSKVNFATVNGPNGIGKSSFFMDAISDCLYE 460 >gi|254364175|ref|ZP_04980221.1| hypothetical protein TBHG_01262 [Mycobacterium tuberculosis str. Haarlem] gi|134149689|gb|EBA41734.1| hypothetical protein TBHG_01262 [Mycobacterium tuberculosis str. Haarlem] Length = 875 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|118444709|ref|YP_878060.1| DNA repair protein RecN [Clostridium novyi NT] gi|118135165|gb|ABK62209.1| DNA repair protein RecN [Clostridium novyi NT] Length = 564 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ + Sbjct: 2 LLQLNIKNF-ALIESLTINFEKGFNVLTGETGAGKSILIDAINYVLGEKFNKGL 54 >gi|94992057|ref|YP_600156.1| chromosome segregation ATPases [Streptococcus phage 2096.1] gi|94545565|gb|ABF35612.1| Chromosome segregation ATPases [Streptococcus phage 2096.1] Length = 446 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +EI + + ++ A LTI+ G N GK+S+ +AI W G + Sbjct: 10 ITINKLEIENVKRIKAVKIEPSATGLTIIGGNNNQGKTSVLDAIAWALGGNKYK 63 >gi|15674730|ref|NP_268904.1| hypothetical protein SPy_0663 [Streptococcus phage 370.1] gi|13621853|gb|AAK33625.1| hypothetical protein, phage associated [Streptococcus phage 370.1] Length = 439 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +EI + + ++ A LTI+ G N GK+S+ +AI W G + Sbjct: 3 ITINKLEIENVKRIKAVKIEPSATGLTIIGGNNNQGKTSVLDAIAWALGGNKYK 56 >gi|16762489|ref|NP_458106.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143977|ref|NP_807319.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168818304|ref|ZP_02830304.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|213052918|ref|ZP_03345796.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213581831|ref|ZP_03363657.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609169|ref|ZP_03368995.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|20978597|sp|Q8Z2N4|RECF_SALTI RecName: Full=DNA replication and repair protein recF gi|25300556|pir||AC0958 recF protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504794|emb|CAD03159.1| recF protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139613|gb|AAO71179.1| recF protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|205344501|gb|EDZ31265.1| DNA replication and repair protein RecF [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088257|emb|CBY98019.1| DNA replication and repair protein recF [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 357 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|148822495|ref|YP_001287249.1| hypothetical protein TBFG_11304 [Mycobacterium tuberculosis F11] gi|253799677|ref|YP_003032678.1| hypothetical protein TBMG_02703 [Mycobacterium tuberculosis KZN 1435] gi|254550284|ref|ZP_05140731.1| hypothetical protein Mtube_07469 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289554933|ref|ZP_06444143.1| hypothetical protein TBXG_02683 [Mycobacterium tuberculosis KZN 605] gi|297633827|ref|ZP_06951607.1| hypothetical protein MtubK4_06879 [Mycobacterium tuberculosis KZN 4207] gi|297730813|ref|ZP_06959931.1| hypothetical protein MtubKR_06964 [Mycobacterium tuberculosis KZN R506] gi|313658145|ref|ZP_07815025.1| hypothetical protein MtubKV_06979 [Mycobacterium tuberculosis KZN V2475] gi|148721022|gb|ABR05647.1| hypothetical protein TBFG_11304 [Mycobacterium tuberculosis F11] gi|253321180|gb|ACT25783.1| hypothetical protein TBMG_02703 [Mycobacterium tuberculosis KZN 1435] gi|289439565|gb|EFD22058.1| hypothetical protein TBXG_02683 [Mycobacterium tuberculosis KZN 605] gi|328459423|gb|AEB04846.1| hypothetical protein TBSG_02717 [Mycobacterium tuberculosis KZN 4207] Length = 875 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|15608418|ref|NP_215794.1| hypothetical protein Rv1278 [Mycobacterium tuberculosis H37Rv] gi|15840725|ref|NP_335762.1| hypothetical protein MT1315 [Mycobacterium tuberculosis CDC1551] gi|31792470|ref|NP_854963.1| hypothetical protein Mb1309 [Mycobacterium bovis AF2122/97] gi|121637206|ref|YP_977429.1| hypothetical protein BCG_1337 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661065|ref|YP_001282588.1| hypothetical protein MRA_1286 [Mycobacterium tuberculosis H37Ra] gi|215430162|ref|ZP_03428081.1| hypothetical protein MtubE_05673 [Mycobacterium tuberculosis EAS054] gi|224989681|ref|YP_002644368.1| hypothetical protein JTY_1312 [Mycobacterium bovis BCG str. Tokyo 172] gi|254231535|ref|ZP_04924862.1| hypothetical protein TBCG_01259 [Mycobacterium tuberculosis C] gi|260186213|ref|ZP_05763687.1| hypothetical protein MtubCP_09323 [Mycobacterium tuberculosis CPHL_A] gi|260200328|ref|ZP_05767819.1| hypothetical protein MtubT4_09418 [Mycobacterium tuberculosis T46] gi|260204532|ref|ZP_05772023.1| hypothetical protein MtubK8_09528 [Mycobacterium tuberculosis K85] gi|289442716|ref|ZP_06432460.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446872|ref|ZP_06436616.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289573940|ref|ZP_06454167.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289753354|ref|ZP_06512732.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|294994834|ref|ZP_06800525.1| hypothetical protein Mtub2_10067 [Mycobacterium tuberculosis 210] gi|306775446|ref|ZP_07413783.1| hypothetical protein TMAG_01910 [Mycobacterium tuberculosis SUMu001] gi|306781641|ref|ZP_07419978.1| hypothetical protein TMBG_01329 [Mycobacterium tuberculosis SUMu002] gi|306783998|ref|ZP_07422320.1| hypothetical protein TMCG_00908 [Mycobacterium tuberculosis SUMu003] gi|306788362|ref|ZP_07426684.1| hypothetical protein TMDG_01156 [Mycobacterium tuberculosis SUMu004] gi|306792688|ref|ZP_07430990.1| hypothetical protein TMEG_01174 [Mycobacterium tuberculosis SUMu005] gi|306797095|ref|ZP_07435397.1| hypothetical protein TMFG_02468 [Mycobacterium tuberculosis SUMu006] gi|306802975|ref|ZP_07439643.1| hypothetical protein TMHG_00462 [Mycobacterium tuberculosis SUMu008] gi|306807165|ref|ZP_07443833.1| hypothetical protein TMGG_01840 [Mycobacterium tuberculosis SUMu007] gi|306967364|ref|ZP_07480025.1| hypothetical protein TMIG_02952 [Mycobacterium tuberculosis SUMu009] gi|306971556|ref|ZP_07484217.1| hypothetical protein TMJG_03920 [Mycobacterium tuberculosis SUMu010] gi|307079269|ref|ZP_07488439.1| hypothetical protein TMKG_01775 [Mycobacterium tuberculosis SUMu011] gi|54040074|sp|P64796|Y1309_MYCBO RecName: Full=Uncharacterized protein Mb1309 gi|54042505|sp|P64795|Y1278_MYCTU RecName: Full=Uncharacterized protein Rv1278/MT1315 gi|1480308|emb|CAB00904.1| HYPOTHETICAL PROTEIN Rv1278 [Mycobacterium tuberculosis H37Rv] gi|13880915|gb|AAK45576.1| hypothetical protein MT1315 [Mycobacterium tuberculosis CDC1551] gi|31618059|emb|CAD94170.1| HYPOTHETICAL PROTEIN Mb1309 [Mycobacterium bovis AF2122/97] gi|121492853|emb|CAL71324.1| Hypothetical protein BCG_1337 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600594|gb|EAY59604.1| hypothetical protein TBCG_01259 [Mycobacterium tuberculosis C] gi|148505217|gb|ABQ73026.1| hypothetical protein MRA_1286 [Mycobacterium tuberculosis H37Ra] gi|224772794|dbj|BAH25600.1| hypothetical protein JTY_1312 [Mycobacterium bovis BCG str. Tokyo 172] gi|289415635|gb|EFD12875.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419830|gb|EFD17031.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289538371|gb|EFD42949.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289693941|gb|EFD61370.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|308216066|gb|EFO75465.1| hypothetical protein TMAG_01910 [Mycobacterium tuberculosis SUMu001] gi|308325602|gb|EFP14453.1| hypothetical protein TMBG_01329 [Mycobacterium tuberculosis SUMu002] gi|308331234|gb|EFP20085.1| hypothetical protein TMCG_00908 [Mycobacterium tuberculosis SUMu003] gi|308335050|gb|EFP23901.1| hypothetical protein TMDG_01156 [Mycobacterium tuberculosis SUMu004] gi|308338858|gb|EFP27709.1| hypothetical protein TMEG_01174 [Mycobacterium tuberculosis SUMu005] gi|308342543|gb|EFP31394.1| hypothetical protein TMFG_02468 [Mycobacterium tuberculosis SUMu006] gi|308346407|gb|EFP35258.1| hypothetical protein TMGG_01840 [Mycobacterium tuberculosis SUMu007] gi|308350349|gb|EFP39200.1| hypothetical protein TMHG_00462 [Mycobacterium tuberculosis SUMu008] gi|308354979|gb|EFP43830.1| hypothetical protein TMIG_02952 [Mycobacterium tuberculosis SUMu009] gi|308358926|gb|EFP47777.1| hypothetical protein TMJG_03920 [Mycobacterium tuberculosis SUMu010] gi|308362889|gb|EFP51740.1| hypothetical protein TMKG_01775 [Mycobacterium tuberculosis SUMu011] gi|323720234|gb|EGB29333.1| hypothetical protein TMMG_01973 [Mycobacterium tuberculosis CDC1551A] gi|326902899|gb|EGE49832.1| hypothetical protein TBPG_00754 [Mycobacterium tuberculosis W-148] Length = 875 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG +EF D + +V G N GKSS+ EA++ L + D Sbjct: 1 MKLHRLALTNYRGIAHRD-VEFPDHGVVVVCGANEIGKSSMVEALDLLLE-------YKD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 K+ +K P V Sbjct: 53 RSTKKEVKQVKPTNADV 69 >gi|281411756|ref|YP_003345835.1| hypothetical protein Tnap_0317 [Thermotoga naphthophila RKU-10] gi|281372859|gb|ADA66421.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10] Length = 758 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F F E L I+ G N GK++L+ I + G Sbjct: 1 MKIERVHVEGFGKF-ENFSFPLKSGLNIIFGGNAAGKTTLANFIRYCLTG 49 >gi|242278886|ref|YP_002991015.1| ATP-binding protein [Desulfovibrio salexigens DSM 2638] gi|242121780|gb|ACS79476.1| ATP-binding protein [Desulfovibrio salexigens DSM 2638] Length = 354 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 L ++++++F F+E + + F+ + + G+NG GKS L +A Sbjct: 2 LKNLKLTNFTAFSEAE-LNFSKGINFIIGRNGVGKSHLLKA 41 >gi|134079782|emb|CAK40917.1| unnamed protein product [Aspergillus niger] Length = 1136 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++ + + G+NG GKS++ AI G G S+K Sbjct: 97 LERVECYNFMCH-DHFYVDLGPLINFIVGKNGSGKSAVLTAITLCLGGKASTTNRGQSLK 155 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK V R K Q Sbjct: 156 -SFIKEGKEHATIVVRIKNQ 174 >gi|148269526|ref|YP_001243986.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1] gi|147735070|gb|ABQ46410.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1] Length = 758 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F F E L I+ G N GK++L+ I + G Sbjct: 1 MKIERVHVEGFGKF-ENFSFPLKSGLNIIFGGNAAGKTTLANFIRYCLTG 49 >gi|119773157|ref|YP_925897.1| recombination protein F [Shewanella amazonensis SB2B] gi|166221861|sp|A1S1H1|RECF_SHEAM RecName: Full=DNA replication and repair protein recF gi|119765657|gb|ABL98227.1| DNA replication and repair protein RecF [Shewanella amazonensis SB2B] Length = 360 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR + ++ L ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLSRLSIDAFRNI-DSAQLAPGAGLNLIYGHNGSGKTSILEAIYFLGMGRSFRS 54 >gi|168184563|ref|ZP_02619227.1| DNA repair protein RecN [Clostridium botulinum Bf] gi|237795292|ref|YP_002862844.1| DNA repair protein recN [Clostridium botulinum Ba4 str. 657] gi|182672343|gb|EDT84304.1| DNA repair protein RecN [Clostridium botulinum Bf] gi|229262758|gb|ACQ53791.1| DNA repair protein recN [Clostridium botulinum Ba4 str. 657] Length = 567 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|1262354|emb|CAA94710.1| RecF [Mycobacterium leprae] Length = 385 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + +E T+ G NG GK++L EA+ + + R Sbjct: 1 MYVRHFGLRDFRSW-DHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|886327|gb|AAB53143.1| single-stranded DNA binding protein [Mycobacterium leprae] Length = 223 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + +E T+ G NG GK++L EA+ + + R Sbjct: 1 MYVRHFGLRDFRSW-DHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|15826868|ref|NP_301131.1| recombination protein F [Mycobacterium leprae TN] gi|221229346|ref|YP_002502762.1| recombination protein F [Mycobacterium leprae Br4923] gi|13432238|sp|P46391|RECF_MYCLE RecName: Full=DNA replication and repair protein recF gi|254790484|sp|B8ZTP0|RECF_MYCLB RecName: Full=DNA replication and repair protein recF gi|13092415|emb|CAC29511.1| putative DNA replication and SOS induction protein [Mycobacterium leprae] gi|219932453|emb|CAR70096.1| putative DNA replication and SOS induction protein [Mycobacterium leprae Br4923] Length = 385 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + +E T+ G NG GK++L EA+ + + R Sbjct: 1 MYVRHFGLRDFRSW-DHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|317406143|gb|EFV86398.1| hypothetical protein HMPREF0005_04778 [Achromobacter xylosoxidans C54] Length = 232 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + FR F + ++ D L + G N GKS+++ AI F R D Sbjct: 1 MKLTRIALEEFRKFRQPLVLDGLQDGLNLFVGPNEAGKSTVAAAIRAAFLERYSTRTVSD 60 Query: 86 SIKK--RSIKTPMPMCMAVPRCKYQLK 110 + + + + + YQLK Sbjct: 61 LAPRGESGARPGVELAFSHGGHDYQLK 87 >gi|225433512|ref|XP_002266665.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1316 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTG 53 >gi|73662720|ref|YP_301501.1| exonuclease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642530|sp|Q49XE1|SBCC_STAS1 RecName: Full=Nuclease sbcCD subunit C gi|72495235|dbj|BAE18556.1| putative exonuclease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 1009 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 + + + +++F F I+F + L +++G+ G GK+ + +AI + +G + + Sbjct: 1 MRPIKLNLTNFGPFLNET-IDFNNVENNQLFLISGKTGSGKTMIFDAIVFALFGEASTKD 59 Query: 82 KHGDSIKKRSIKTPMPM 98 + ++ ++ PM Sbjct: 60 RKESDLRSHFAESKKPM 76 >gi|87121027|ref|ZP_01076919.1| recombination protein F [Marinomonas sp. MED121] gi|86163865|gb|EAQ65138.1| recombination protein F [Marinomonas sp. MED121] Length = 375 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++IS R + + + + H+ +++G NG GK+S+ EAI L G + R KH Sbjct: 1 MPLQRLDISQLRNLS-KVQFKPSPHVNLISGANGSGKTSILEAIHLLSLGRSFRSHKHKT 59 Query: 86 SIKKRSIK 93 I+K + + Sbjct: 60 YIQKETSE 67 >gi|148251630|ref|YP_001236215.1| recombination protein F [Bradyrhizobium sp. BTAi1] gi|146403803|gb|ABQ32309.1| DNA replication and repair protein RecF [Bradyrhizobium sp. BTAi1] Length = 378 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + + + + G NG GK++ EAI + G RR + + Sbjct: 5 RINRLALTHFRSYRA-ASVSVQADMVALVGANGAGKTNCLEAISFFAPGRGLRRATLEDV 63 Query: 88 KKRSIK 93 Sbjct: 64 ADNQGD 69 >gi|77405296|ref|ZP_00782392.1| chromosome segregation protein, putative [Streptococcus agalactiae H36B] gi|77176091|gb|EAO78864.1| chromosome segregation protein, putative [Streptococcus agalactiae H36B] Length = 439 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 28/56 (50%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +EI + + ++ + LTI+ G N GK+S+ ++I W+ G + Sbjct: 1 MTITINKLEIENVKRIKAVKVEPSSKGLTIIGGNNNQGKTSVLDSIAWVLGGNKFK 56 >gi|327188546|gb|EGE55757.1| SMC-like protein [Rhizobium etli CNPAF512] Length = 660 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFAD--------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++ +F + + + + A + +V G+NG GK++ EA+ YG + Sbjct: 3 LHSLKLENFGLYQGVTQFDLAPRKRSGGDAPIVLVGGKNGAGKTTFLEALRLALYG---K 59 Query: 81 RKHGDSIKKRSIKT 94 R G + + + Sbjct: 60 RALGTRVGQSEYEQ 73 >gi|326803326|ref|YP_004321144.1| DNA repair protein RecN [Aerococcus urinae ACS-120-V-Col10a] gi|326650342|gb|AEA00525.1| DNA repair protein RecN [Aerococcus urinae ACS-120-V-Col10a] Length = 570 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +I I +F + I+F + +T++ G+ G GKS + +A+ L G Sbjct: 2 LQNIVIENF-AIIDQVTIDFDEGMTVLTGETGAGKSIIIDALGLLAGG 48 >gi|310796359|gb|EFQ31820.1| RecF/RecN/SMC N terminal domain-containing protein [Glomerella graminicola M1.001] Length = 1172 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 131 IESVECINFMCH-ERLYVELGPLINFIVGENGSGKSAVLTALTLCLGGKASSTNRGGSLK 189 >gi|310825040|ref|YP_003957398.1| hypothetical protein STAUR_7816 [Stigmatella aurantiaca DW4/3-1] gi|309398112|gb|ADO75571.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 558 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++ F+ + I F T + G N GKS+L +AI +L Sbjct: 103 LTRLKVEGFKSLLD-VDIHFGP-FTCIAGMNAVGKSNLFDAIRFL 145 >gi|307129882|ref|YP_003881898.1| exonuclease, dsDNA, ATP-dependent [Dickeya dadantii 3937] gi|306527411|gb|ADM97341.1| exonuclease, dsDNA, ATP-dependent [Dickeya dadantii 3937] Length = 1227 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 81 RKHGDS 86 K G S Sbjct: 61 LKVGPS 66 >gi|229190422|ref|ZP_04317422.1| Exonuclease [Bacillus cereus ATCC 10876] gi|228593035|gb|EEK50854.1| Exonuclease [Bacillus cereus ATCC 10876] Length = 1022 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|218514291|ref|ZP_03511131.1| hypothetical protein Retl8_11591 [Rhizobium etli 8C-3] Length = 236 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 ++ + I FR ++ +F + T++ GQNG GKS+L EAI Sbjct: 1 MRIDRVYIDGFRNLQDVAA-DFDEGCLTTVIIGQNGAGKSNLIEAI 45 >gi|188588107|ref|YP_001920686.1| putative RecF/RecN/SMC N domain [Clostridium botulinum E3 str. Alaska E43] gi|188498388|gb|ACD51524.1| RecF/RecN/SMC domain protein [Clostridium botulinum E3 str. Alaska E43] Length = 789 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +EI++F+ + I+F+ L +++G NGYGK+++ + IE L G Sbjct: 4 INRLEINNFKLIDSKKVIDFSKSDLIVLDGPNGYGKTTIFDTIEILVKGN 53 >gi|115373581|ref|ZP_01460877.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|115369423|gb|EAU68362.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] Length = 457 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +++ F+ + I F T + G N GKS+L +AI +L Sbjct: 2 LTRLKVEGFKSLLD-VDIHFGP-FTCIAGMNAVGKSNLFDAIRFL 44 >gi|119720477|ref|YP_920972.1| SMC domain-containing protein [Thermofilum pendens Hrk 5] gi|119525597|gb|ABL78969.1| SMC domain protein [Thermofilum pendens Hrk 5] Length = 840 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 27/51 (52%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + L+ ++ +FR + + F ++ G+N GKS++ EA+ + +G Sbjct: 1 MVTLVSLKAQNFRRLNFQEPLVFPKGFVVIRGRNEAGKSTILEAVLFGLFG 51 >gi|150387857|ref|YP_001317906.1| DNA replication and repair protein RecF [Alkaliphilus metalliredigens QYMF] gi|166918718|sp|A6TJ79|RECF_ALKMQ RecName: Full=DNA replication and repair protein recF gi|149947719|gb|ABR46247.1| DNA replication and repair protein RecF [Alkaliphilus metalliredigens QYMF] Length = 368 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +FR + E +++ L I G+N GK+++ EA+ G + R + Sbjct: 3 IEGLKLINFRNY-EQLQLQLHPKLNIFVGENAQGKTNVLEAVYLSAIGKSFRTSKDQEMI 61 Query: 89 K 89 Sbjct: 62 F 62 >gi|298290589|ref|YP_003692528.1| DNA replication and repair protein RecF [Starkeya novella DSM 506] gi|296927100|gb|ADH87909.1| DNA replication and repair protein RecF [Starkeya novella DSM 506] Length = 385 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 FR + I D ++ G NG GK++L EAI L G RR D R + Sbjct: 14 FRSYH-HADIRAGDGPVVLVGPNGAGKTNLLEAISLLAPGRGLRRASLDQFAARGPEGTQ 72 Query: 97 PMCMAV 102 AV Sbjct: 73 AAGWAV 78 >gi|162455814|ref|YP_001618181.1| hypothetical protein sce7532 [Sorangium cellulosum 'So ce 56'] gi|161166396|emb|CAN97701.1| hypothetical protein sce7532 [Sorangium cellulosum 'So ce 56'] Length = 456 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 8/45 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAI 70 + IEI F+ F FA + +++ G NG GKS+L +A+ Sbjct: 13 ITRIEIDGFKSFQG-----FALDLEPFSVLIGPNGAGKSNLLDAL 52 >gi|332994309|gb|AEF04364.1| exonuclease SbcC [Alteromonas sp. SN2] Length = 1223 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|325479339|gb|EGC82435.1| conserved domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 616 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGD 85 + ++ I F F E + I+F +V G+N GKS+L+ +E L YG+ + + K Sbjct: 4 VYIKELNIISFGKF-ENKNIKFDKGFNLVFGKNESGKSTLANFVEGLLYGFDEGKSKRNF 62 Query: 86 SIKKRSIK 93 S KK + K Sbjct: 63 SYKKEAYK 70 >gi|325274185|ref|ZP_08140311.1| SMC domain protein [Pseudomonas sp. TJI-51] gi|324100679|gb|EGB98399.1| SMC domain protein [Pseudomonas sp. TJI-51] Length = 1214 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|229069870|ref|ZP_04203152.1| Exonuclease [Bacillus cereus F65185] gi|228713273|gb|EEL65166.1| Exonuclease [Bacillus cereus F65185] Length = 1022 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229083251|ref|ZP_04215625.1| Exonuclease [Bacillus cereus Rock4-2] gi|228700057|gb|EEL52669.1| Exonuclease [Bacillus cereus Rock4-2] Length = 1022 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|222529589|ref|YP_002573471.1| hypothetical protein Athe_1604 [Caldicellulosiruptor bescii DSM 6725] gi|312127362|ref|YP_003992236.1| hypothetical protein Calhy_1146 [Caldicellulosiruptor hydrothermalis 108] gi|222456436|gb|ACM60698.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM 6725] gi|311777381|gb|ADQ06867.1| conserved hypothetical protein [Caldicellulosiruptor hydrothermalis 108] Length = 685 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I+I +FR F E IEF D LT + G N GK+++ A+ +F + K D Sbjct: 1 MYIDKIKIRNFRCFGPEETVIEF-DKLTALIGANSCGKTAVLHALMKIFGSDNKEIKRSD 59 >gi|170720770|ref|YP_001748458.1| SMC domain-containing protein [Pseudomonas putida W619] gi|169758773|gb|ACA72089.1| SMC domain protein [Pseudomonas putida W619] Length = 1214 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|228952680|ref|ZP_04114754.1| Exonuclease [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228806956|gb|EEM53501.1| Exonuclease [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1022 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|225871757|ref|YP_002753211.1| RecF/RecN/SMC N-terminal domain protein [Acidobacterium capsulatum ATCC 51196] gi|225792246|gb|ACO32336.1| RecF/RecN/SMC N-terminal domain protein [Acidobacterium capsulatum ATCC 51196] Length = 362 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Query: 29 LLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWL 73 L I I +FR F E+ + ++ G NG GKSSL +AI +L Sbjct: 2 LTRIYIDNFRSFVN---FEYRPESKQLLLGPNGSGKSSLLDAIRYL 44 >gi|225027019|ref|ZP_03716211.1| hypothetical protein EUBHAL_01275 [Eubacterium hallii DSM 3353] gi|224955483|gb|EEG36692.1| hypothetical protein EUBHAL_01275 [Eubacterium hallii DSM 3353] Length = 1149 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + L +++ + E Q I+F + L + G G GKS++ +A+ Y Sbjct: 1 MRPLQLKLKGINSYREEQVIDFETLTSQGLFGIFGPTGSGKSTILDAMTLALY 53 >gi|70605904|ref|YP_254774.1| DNA double-strand break repair rad50 ATPase [Sulfolobus acidocaldarius DSM 639] gi|18202023|sp|O33600|RAD50_SULAC RecName: Full=DNA double-strand break repair rad50 ATPase gi|2293014|emb|CAA71688.1| purine NTPase [Sulfolobus acidocaldarius] gi|21388537|emb|CAD26845.1| Rad50 protein [Sulfolobus acidocaldarius] gi|68566552|gb|AAY79481.1| DNA double-strand break repair rad50 ATPase [Sulfolobus acidocaldarius DSM 639] Length = 886 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +I + +F E ++F + ++ G NG GKSS+ + I + + T R Sbjct: 3 IREIRLQNFLSH-EDTTVKFEGSINVIIGNNGAGKSSIIDGILFGLFKRTNRDI 55 >gi|320449560|ref|YP_004201656.1| putative ATP-dependent endonuclease of the OLD family [Thermus scotoductus SA-01] gi|320149729|gb|ADW21107.1| putative ATP-dependent endonuclease of the OLD family [Thermus scotoductus SA-01] Length = 528 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFY 75 L +++ +FR + I+ LT + G NG GK+++ AI+ + Sbjct: 2 LKRLQVKNFRCLED---IDLPLGPLTAIVGPNGAGKTTILRAIDLVLG 46 >gi|150864715|ref|XP_001383656.2| structural maintenance of chromosomes protein [Scheffersomyces stipitis CBS 6054] gi|149385971|gb|ABN65627.2| structural maintenance of chromosomes protein [Scheffersomyces stipitis CBS 6054] Length = 1093 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 L+ +++++F + + + L +V G NG GKS++ AI G +R+ S Sbjct: 40 LMKLKLTNFNNYGSGE-FNLSPSLNMVIGPNGSGKSTVVSAICLGLGGKIDLIKRQTLSS 98 Query: 87 IKKRSIKT 94 + K+ T Sbjct: 99 MIKKGKST 106 >gi|114567066|ref|YP_754220.1| hypothetical protein Swol_1546 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338001|gb|ABI68849.1| hypothetical protein Swol_1546 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 165 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 14 SKSLTSYYARKLI-----FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 S Y +RK++ L + I+ +R F + F L ++ NG GKSSL E Sbjct: 19 SNRFLYYSSRKMLKGAVFMYLKSLRINGYRPFRDFTA-NFG-QLEVLVDANGSGKSSLFE 76 Query: 69 AIEWLFYGYTQ 79 +++L G + Sbjct: 77 FLKFLRDGMGE 87 >gi|68060704|ref|XP_672341.1| DNA repair protein RAD50 [Plasmodium berghei strain ANKA] gi|56489322|emb|CAH94687.1| DNA repair protein RAD50, putative [Plasmodium berghei] Length = 272 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I I R + + Q++EF+ +TI+ G NG GKS++ E ++ Sbjct: 4 LDKIGIQGIRSYCDEYSQQLEFSSPITIIYGNNGSGKSTIIECLK 48 >gi|333029968|ref|ZP_08458029.1| SMC domain protein [Bacteroides coprosuis DSM 18011] gi|332740565|gb|EGJ71047.1| SMC domain protein [Bacteroides coprosuis DSM 18011] Length = 979 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ IE+ + I+F + ++G G GKS++ +A+ Y R Sbjct: 1 MKITRIELCNLASIESEAVIDFEKEPLLSAGIFAISGPTGSGKSTILDALCLALYDKIPR 60 >gi|296111977|ref|YP_003622359.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154] gi|295833509|gb|ADG41390.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154] Length = 788 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + K+ I IS F G Q+ +F D ++ GQN GKS++ I + +G+ ++ H + Sbjct: 1 MIKIKQIMISGF-GRWSQQRFDFIDDFQVIVGQNESGKSTVRAFIVGMLFGFPTKKGHAN 59 >gi|284996493|ref|YP_003418260.1| hypothetical protein LD85_0088 [Sulfolobus islandicus L.D.8.5] gi|284444388|gb|ADB85890.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 495 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + +V G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNVVVGYNGYGKTNLLSSI-FLFIKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 ++ R+ + Sbjct: 59 VEDRNQE 65 >gi|238618566|ref|YP_002913391.1| hypothetical protein M164_0087 [Sulfolobus islandicus M.16.4] gi|238379635|gb|ACR40723.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4] Length = 495 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + +V G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNVVVGYNGYGKTNLLSSI-FLFIKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 ++ R+ + Sbjct: 59 VEDRNQE 65 >gi|227826498|ref|YP_002828277.1| hypothetical protein M1425_0087 [Sulfolobus islandicus M.14.25] gi|229583660|ref|YP_002842161.1| hypothetical protein M1627_0087 [Sulfolobus islandicus M.16.27] gi|227458293|gb|ACP36979.1| conserved hypothetical protein [Sulfolobus islandicus M.14.25] gi|228018709|gb|ACP54116.1| conserved hypothetical protein [Sulfolobus islandicus M.16.27] Length = 495 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + +V G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNVVVGYNGYGKTNLLSSI-FLFIKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 ++ R+ + Sbjct: 59 VEDRNQE 65 >gi|227829107|ref|YP_002830886.1| hypothetical protein LS215_0087 [Sulfolobus islandicus L.S.2.15] gi|229577907|ref|YP_002836305.1| hypothetical protein YG5714_0089 [Sulfolobus islandicus Y.G.57.14] gi|227455554|gb|ACP34241.1| conserved hypothetical protein [Sulfolobus islandicus L.S.2.15] gi|228008621|gb|ACP44383.1| conserved hypothetical protein [Sulfolobus islandicus Y.G.57.14] gi|323473575|gb|ADX84181.1| ATPase-like protein [Sulfolobus islandicus REY15A] gi|323476222|gb|ADX81460.1| ATPase-like protein [Sulfolobus islandicus HVE10/4] Length = 495 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + +V G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNVVVGYNGYGKTNLLSSI-FLFIKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 ++ R+ + Sbjct: 59 VEDRNQE 65 >gi|206579854|ref|YP_002237036.1| OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein [Klebsiella pneumoniae 342] gi|206568912|gb|ACI10688.1| OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein [Klebsiella pneumoniae 342] Length = 583 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH--- 83 L ++IS FR + + LT++ G+N GKS++ +AI L + RR+ Sbjct: 1 MYLGSLKISRFRS-CDDVTVSLRPDLTVLVGENNGGKSNVVDAIRLLTLPLSGRRERYPE 59 Query: 84 GDSIKKRS 91 + +++ S Sbjct: 60 DEDVRRYS 67 >gi|197336139|ref|YP_002155787.1| RecF/RecN/SMC N domain protein [Vibrio fischeri MJ11] gi|197317629|gb|ACH67076.1| RecF/RecN/SMC N domain protein [Vibrio fischeri MJ11] Length = 648 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ FR F + ++ D L ++ G+NG GK+++ AI LF R Sbjct: 1 MYLSKLKAEGFRCFDKGFSVKLTDELNVIVGENGAGKTAVISAIRQLFQDSESGR 55 >gi|171185553|ref|YP_001794472.1| hypothetical protein Tneu_1095 [Thermoproteus neutrophilus V24Sta] gi|170934765|gb|ACB40026.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta] Length = 453 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + + + +F+ E++ +E + ++ G NG GKS++ EA+ + Sbjct: 1 MYVFVRKVVVRNFKSIGELE-LELRPGVNLLVGANGAGKSNVLEAVRFA 48 >gi|163802135|ref|ZP_02196030.1| recombination protein F [Vibrio sp. AND4] gi|159173940|gb|EDP58750.1| recombination protein F [Vibrio sp. AND4] Length = 359 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I+ + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IDLSAGFNFLIGPNGSGKTSILEAVYLLGHGRSFKS 54 >gi|172059076|ref|YP_001806728.1| DNA sulfur modification protein DndD [Burkholderia ambifaria MC40-6] gi|171991593|gb|ACB62512.1| DNA sulfur modification protein DndD [Burkholderia ambifaria MC40-6] Length = 660 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Query: 27 FKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I +F F E Q +E + +V NG GK++L A++ YGY Sbjct: 4 ITISSVSIENFGPFRERQTLALDVEETRPVVLVKALNGSGKTTLLTALQIGLYGYKAI-- 61 Query: 83 HGDSIKKRSIKT 94 D +K+ + Sbjct: 62 --DGMKRSEYEQ 71 >gi|116328203|ref|YP_797923.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120947|gb|ABJ78990.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 568 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 17/71 (23%) Query: 36 HFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + R F E I+F +T++ G+ G GKS + +AI L G + Sbjct: 6 NIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKS--------------- 50 Query: 94 TPMPMCMAVPR 104 +PM + PR Sbjct: 51 SPMEIRTGAPR 61 >gi|282863226|ref|ZP_06272286.1| SMC domain protein [Streptomyces sp. ACTE] gi|282562208|gb|EFB67750.1| SMC domain protein [Streptomyces sp. ACTE] Length = 1017 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + ++ F F Q+++F + L +++G G GK+S+ +A+ + Y Sbjct: 1 MRLHRLTLTAFGPFGTTQEVDFDALSSAGLFLLHGPTGAGKTSILDAVCYALY 53 >gi|110678157|ref|YP_681164.1| hypothetical protein RD1_0800 [Roseobacter denitrificans OCh 114] gi|109454273|gb|ABG30478.1| hypothetical protein RD1_0800 [Roseobacter denitrificans OCh 114] Length = 650 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + +++F + + + A + +V G NG GK++ E++ YG Sbjct: 3 LQSLCLTNFGLYGGEHRFDLAPEPDGQKPVVLVVGHNGAGKTTFLESVRLALYGKRALGA 62 Query: 83 H 83 Sbjct: 63 R 63 >gi|291460396|ref|ZP_06599786.1| putative exonuclease SbcC [Oribacterium sp. oral taxon 078 str. F0262] gi|291416963|gb|EFE90682.1| putative exonuclease SbcC [Oribacterium sp. oral taxon 078 str. F0262] Length = 1108 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + L +++ F + + I+F L +V+G G GKSS+ +A+ + YG Sbjct: 46 LMRPLQLKLQAFSSYGKAVTIDFTKPNQELFLVSGNTGSGKSSIFDALVFALYGEASSGA 105 Query: 83 HGDSIKKRSIK 93 + S + + Sbjct: 106 NKKSGSELQSQ 116 >gi|167767198|ref|ZP_02439251.1| hypothetical protein CLOSS21_01717 [Clostridium sp. SS2/1] gi|167711173|gb|EDS21752.1| hypothetical protein CLOSS21_01717 [Clostridium sp. SS2/1] gi|291559477|emb|CBL38277.1| Predicted ATPase [butyrate-producing bacterium SSC/2] Length = 236 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + +++++EF + + G+NG GKS+L EAI + +G+ + + + Sbjct: 22 LKQIEALKDVERLEFQNSINFFVGENGSGKSTLLEAIA-IAHGFNPEGGTKNYV-FSTHD 79 Query: 94 TPMPMCMAV 102 T +C A+ Sbjct: 80 THSELCDAI 88 >gi|163856888|ref|YP_001631186.1| putative GTP-binding protein [Bordetella petrii DSM 12804] gi|163260616|emb|CAP42918.1| putative GTP-binding protein [Bordetella petrii] Length = 874 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIE 71 KL I + FR F ++ AD L ++ G N GKS+ AI Sbjct: 1 MKLRRIALEEFRKFRGAAVLDDLADGLNVIAGPNEAGKSTFVAAIR 46 >gi|126663370|ref|ZP_01734368.1| putative DNA replication and repair protein [Flavobacteria bacterium BAL38] gi|126625028|gb|EAZ95718.1| putative DNA replication and repair protein [Flavobacteria bacterium BAL38] Length = 359 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ +I+ EF + G+NG GK+++ +AI L YG + Sbjct: 1 MFLKQLSLLNYKNLAQIE-FEFDAKINCFVGKNGVGKTNILDAIYHLAYGKS 51 >gi|15834965|ref|NP_296724.1| recombination protein F [Chlamydia muridarum Nigg] gi|270285139|ref|ZP_06194533.1| recombination protein F [Chlamydia muridarum Nigg] gi|270289161|ref|ZP_06195463.1| recombination protein F [Chlamydia muridarum Weiss] gi|301336534|ref|ZP_07224736.1| recombination protein F [Chlamydia muridarum MopnTet14] gi|13959495|sp|Q9PKW5|RECF_CHLMU RecName: Full=DNA replication and repair protein recF gi|7190387|gb|AAF39207.1| recF protein, putative [Chlamydia muridarum Nigg] Length = 365 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ + + FR ++E+ ++E + + G N GK+++ EA+ L G + R Sbjct: 1 MRVHSLFLKDFRNYSEL-RLELGPEMNSIFGLNAQGKTNILEALYILSLGRSFRTSR 56 >gi|317046241|ref|YP_004113889.1| DNA replication and repair protein RecF [Pantoea sp. At-9b] gi|316947858|gb|ADU67333.1| DNA replication and repair protein RecF [Pantoea sp. At-9b] Length = 361 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EQADLSLAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|255326479|ref|ZP_05367561.1| DNA replication and repair protein RecF [Rothia mucilaginosa ATCC 25296] gi|255296519|gb|EET75854.1| DNA replication and repair protein RecF [Rothia mucilaginosa ATCC 25296] Length = 409 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +R + + + + +T+ G NG GK+++ EAI++ + R H Sbjct: 1 MYIDHISLLDYRTYA-LLSLPLSAGVTVFLGSNGVGKTNIVEAIDYAASLSSHRVSHDGP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRAG 64 >gi|228939498|ref|ZP_04102086.1| Exonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972351|ref|ZP_04132962.1| Exonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978964|ref|ZP_04139329.1| Exonuclease [Bacillus thuringiensis Bt407] gi|228780746|gb|EEM28959.1| Exonuclease [Bacillus thuringiensis Bt407] gi|228787368|gb|EEM35336.1| Exonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820198|gb|EEM66235.1| Exonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 1022 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDDVYTSVELTFQLKGKRYEIK 87 >gi|217968841|ref|YP_002354075.1| GTP-binding protein [Thauera sp. MZ1T] gi|217506168|gb|ACK53179.1| putative GTP-binding protein [Thauera sp. MZ1T] Length = 878 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +LL +++ R F + +I + + + G N GKS+L AI F+ Sbjct: 1 MRLLRLKVEQLRRFRQPVEIRDLDPGINLFTGPNESGKSTLVRAIRAAFFE 51 >gi|254439913|ref|ZP_05053407.1| hypothetical protein OA307_4783 [Octadecabacter antarcticus 307] gi|198255359|gb|EDY79673.1| hypothetical protein OA307_4783 [Octadecabacter antarcticus 307] Length = 799 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL--TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + + FRG ++F + G+N GKS++++A+EW + D Sbjct: 3 KLRSLTATGFRGARFKSPLDFTKKHRSVAIYGENAAGKSTITDALEWFIRDRIEHLWKED 62 >gi|315223291|ref|ZP_07865152.1| DNA repair protein RecN [Streptococcus anginosus F0211] gi|315187723|gb|EFU21477.1| DNA repair protein RecN [Streptococcus anginosus F0211] Length = 552 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + KT + A+ + K Sbjct: 57 HGASKTEIEGLFAIEQSK 74 >gi|302336538|ref|YP_003801745.1| DNA replication and repair protein RecF [Olsenella uli DSM 7084] gi|301320378|gb|ADK68865.1| DNA replication and repair protein RecF [Olsenella uli DSM 7084] Length = 362 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + ++R F E I AD +T+++G+N GK++ EA++ L G++ R + Sbjct: 5 VRSLGLRNWRNFDERN-IALADGMTVLHGRNAAGKTNAIEALQMLTAGFSFRHSKPAQLV 63 Query: 89 KRSI 92 + Sbjct: 64 REDQ 67 >gi|239629037|ref|ZP_04672068.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519183|gb|EEQ59049.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 620 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+L + I F + Q I F D + +V G+N GKS+L I+ + +G ++R Sbjct: 1 MKILSLHIDGFGKLHD-QDISFQDGMNVVYGKNEAGKSTLHTFIKGMLFGLERQRGR 56 >gi|190343118|gb|ACE75518.1| HP1079 [Helicobacter pylori] Length = 370 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + +I+ L I+ G N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGGNNVGKSNLLEAL-YCLVGKS 49 >gi|220905820|ref|YP_002481131.1| SMC domain-containing protein [Cyanothece sp. PCC 7425] gi|219862431|gb|ACL42770.1| SMC domain protein [Cyanothece sp. PCC 7425] Length = 430 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 7/73 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +++ +FRGF E ++F++ T+ G NG GKSS+ + + L R + Sbjct: 1 MRVKSLKMQNFRGF-ENLTLDFSETEPTVFFGINGVGKSSILDCLAILL-----SRILTE 54 Query: 86 SIKKRSIKTPMPM 98 RS+K+ P+ Sbjct: 55 VQTFRSLKSSRPL 67 >gi|116330927|ref|YP_800645.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124616|gb|ABJ75887.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 568 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 17/71 (23%) Query: 36 HFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + R F E I+F +T++ G+ G GKS + +AI L G + Sbjct: 6 NIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKS--------------- 50 Query: 94 TPMPMCMAVPR 104 +PM + PR Sbjct: 51 SPMEIRTGAPR 61 >gi|325191196|emb|CCA25982.1| structural maintenance of chromosomes protein 6 puta [Albugo laibachii Nc14] Length = 1156 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I +F + ++E + H+ + G+NG GKS++ AI+ + G S+K Sbjct: 97 IEEIYCENFMCH-QKLRVELSPHINFITGENGSGKSAIIAAIQICLGASARSTHRGKSLK 155 Query: 89 KR 90 Sbjct: 156 NL 157 >gi|15899044|ref|NP_343649.1| hypothetical protein SSO2277 [Sulfolobus solfataricus P2] gi|284175289|ref|ZP_06389258.1| hypothetical protein Ssol98_11675 [Sulfolobus solfataricus 98/2] gi|13815577|gb|AAK42439.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261600791|gb|ACX90394.1| conserved hypothetical protein [Sulfolobus solfataricus 98/2] Length = 495 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + IV G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNIVVGYNGYGKTNLLSSI-FLFVKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 I+ R+ + Sbjct: 59 IEDRNQE 65 >gi|325277138|ref|ZP_08142784.1| hypothetical protein G1E_26248 [Pseudomonas sp. TJI-51] gi|324097715|gb|EGB95915.1| hypothetical protein G1E_26248 [Pseudomonas sp. TJI-51] Length = 575 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ ++IS+FR + + A + + G GKSS+ +AI+ +R + Sbjct: 3 RIRRLQISNFRSIQALDWVP-APGINCLIGPGDSGKSSILDAIDLCVG--ARRGGTFGDM 59 Query: 88 KKRSIKTPMPMCMAV 102 ++ +P+ ++V Sbjct: 60 DFFALNVDVPITISV 74 >gi|309791752|ref|ZP_07686242.1| DNA replication and repair protein RecF [Oscillochloris trichoides DG6] gi|308226245|gb|EFO79983.1| DNA replication and repair protein RecF [Oscillochloris trichoides DG6] Length = 390 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + FR + + ++ A +T+ G N GK+SL EA+ +L + R + + Sbjct: 1 MSQFSLRDFRNY-QRIDLQLAPGITLFYGSNASGKTSLLEALFYLATTRSPRSRSDHDLV 59 Query: 89 K 89 + Sbjct: 60 R 60 >gi|71065622|ref|YP_264349.1| exonuclease SbcCD, C subunit [Psychrobacter arcticus 273-4] gi|71038607|gb|AAZ18915.1| possible exonuclease SbcCD, C subunit [Psychrobacter arcticus 273-4] Length = 1307 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L+++ + + I+F+D + + GQ G GK+++ +AI Y T R Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR 60 >gi|93006225|ref|YP_580662.1| SMC protein-like [Psychrobacter cryohalolentis K5] gi|92393903|gb|ABE75178.1| SMC protein-like [Psychrobacter cryohalolentis K5] Length = 1303 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L+++ + + I+F+D + + GQ G GK+++ +AI Y T R Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR 60 >gi|295086011|emb|CBK67534.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length = 713 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + ++R + + F A ++ +V G NG+GK++ ++ W YG Sbjct: 1 MFIESIILHNYRAYKGHNQTSFKQDAKNIFLVAGNNGFGKTTFLTSLVWCLYG 53 >gi|260909878|ref|ZP_05916567.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635982|gb|EEX53983.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 520 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 11/84 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + I FRGF E Q+ E LT + GQNG KS+L I F + +G Sbjct: 1 MKIEKVSICKFRGFKE-QQFELGSQLTAIAGQNGTQKSTLLGMITQTFSIPKENPMYG-- 57 Query: 87 IKKRSIKTPMPMCMAVPRCKYQLK 110 P+C R + K Sbjct: 58 --------EKPLCGGSYRSAFSEK 73 >gi|271499553|ref|YP_003332578.1| SMC domain-containing protein [Dickeya dadantii Ech586] gi|270343108|gb|ACZ75873.1| SMC domain protein [Dickeya dadantii Ech586] Length = 1227 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTREPFISNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|228908110|ref|ZP_04071958.1| Exonuclease [Bacillus thuringiensis IBL 200] gi|228851528|gb|EEM96334.1| Exonuclease [Bacillus thuringiensis IBL 200] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDDVYTSVELTFQLKGKRYEIK 87 >gi|190343132|gb|ACE75529.1| HP1079 [Helicobacter pylori] Length = 381 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIRNFKTFKD-TQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|330816398|ref|YP_004360103.1| ATP binding protein [Burkholderia gladioli BSR3] gi|327368791|gb|AEA60147.1| ATP binding protein [Burkholderia gladioli BSR3] Length = 465 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + +R F + I+F + LT++ NG GK+S+ +A+ F Y Sbjct: 4 LNIRRLSLKGYRCF-DAIDIDFDERLTVLIASNGAGKTSILDALAVAFGPY 53 >gi|317013811|gb|ADU81247.1| hypothetical protein HPGAM_02005 [Helicobacter pylori Gambia94/24] Length = 375 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKNF-KNTQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|226949175|ref|YP_002804266.1| DNA repair protein recN [Clostridium botulinum A2 str. Kyoto] gi|226842306|gb|ACO84972.1| DNA repair protein recN [Clostridium botulinum A2 str. Kyoto] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|170758542|ref|YP_001787205.1| DNA repair protein recN [Clostridium botulinum A3 str. Loch Maree] gi|169405531|gb|ACA53942.1| DNA repair protein RecN [Clostridium botulinum A3 str. Loch Maree] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|168180465|ref|ZP_02615129.1| DNA repair protein recN [Clostridium botulinum NCTC 2916] gi|182668694|gb|EDT80672.1| DNA repair protein recN [Clostridium botulinum NCTC 2916] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|166365925|ref|YP_001658198.1| hypothetical protein MAE_31840 [Microcystis aeruginosa NIES-843] gi|166088298|dbj|BAG03006.1| unknown protein [Microcystis aeruginosa NIES-843] Length = 648 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L I +++++ + Q I F H + I+ G NG+GK+SL AI W YG Sbjct: 1 MTLRLKQIRLTNWKCYPS-QNITFNLHPDRKIQIIFGNNGHGKTSLMTAILWCLYG 55 >gi|134093946|ref|YP_001099021.1| hypothetical protein HEAR0700 [Herminiimonas arsenicoxydans] gi|133737849|emb|CAL60894.1| hypothetical protein HEAR0700 [Herminiimonas arsenicoxydans] Length = 486 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++K + +L + ++ +G + I F +T + G+NG GK+SL + + Sbjct: 16 SQKGLIRLDKLTTNNIKGIGDKT-ISFPHRITALCGENGAGKTSLLTTLFSALTPNFAKT 74 Query: 82 K 82 Sbjct: 75 L 75 >gi|219847382|ref|YP_002461815.1| DNA replication and repair protein RecF [Chloroflexus aggregans DSM 9485] gi|254790467|sp|B8G3J6|RECF_CHLAD RecName: Full=DNA replication and repair protein recF gi|219541641|gb|ACL23379.1| DNA replication and repair protein RecF [Chloroflexus aggregans DSM 9485] Length = 392 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + Q + + ++ G N GK+SL EAI +L + R Sbjct: 1 MYIHHLALRDFRNYR-RQDVALSPTTILLYGPNAAGKTSLLEAIFYLATTRSPRLSSDRD 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|317033210|ref|XP_001395076.2| DNA repair protein Rad18 [Aspergillus niger CBS 513.88] Length = 1136 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + ++ + + G+NG GKS++ AI G G S+K Sbjct: 97 LERVECYNFMCH-DHFYVDLGPLINFIVGKNGSGKSAVLTAITLCLGGKASTTNRGQSLK 155 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK V R K Q Sbjct: 156 -SFIKEGKEHATIVVRIKNQ 174 >gi|260426560|ref|ZP_05780539.1| SMC domain protein [Citreicella sp. SE45] gi|260421052|gb|EEX14303.1| SMC domain protein [Citreicella sp. SE45] Length = 868 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L I + + R FT IE D L +++ N GKS+L +AI+ LF+ Sbjct: 1 MRLRSIRLENVRRFTSPVVIEGITDGLNVLSEPNESGKSTLFDAIQALFF 50 >gi|258646955|ref|ZP_05734424.1| putative RecF/RecN/SMC N domain protein [Dialister invisus DSM 15470] gi|260404394|gb|EEW97941.1| putative RecF/RecN/SMC N domain protein [Dialister invisus DSM 15470] Length = 880 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +S F + + ++F+ L ++ G G GKS++ +A+ + YG T Sbjct: 1 MRPERLRLSAFGPYAGQEDLDFSALGNHTLFLICGPTGAGKSTILDAMCYALYGKTSGAV 60 Query: 83 HGDSIKKRSI 92 + + Sbjct: 61 RSGEDLRSNY 70 >gi|228900958|ref|ZP_04065171.1| Exonuclease [Bacillus thuringiensis IBL 4222] gi|228858656|gb|EEN03103.1| Exonuclease [Bacillus thuringiensis IBL 4222] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229178705|ref|ZP_04306069.1| Exonuclease [Bacillus cereus 172560W] gi|228604863|gb|EEK62320.1| Exonuclease [Bacillus cereus 172560W] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEIIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|34496316|ref|NP_900531.1| hypothetical protein CV_0861 [Chromobacterium violaceum ATCC 12472] gi|34102169|gb|AAQ58536.1| hypothetical protein CV_0861 [Chromobacterium violaceum ATCC 12472] Length = 936 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHG 84 +F++ +E+ H+ F + + + + G NG GK++L +A+ L + +R + Sbjct: 1 MFQMKSVEMVHW-DFWQRLSVPLDAQIVTIIGPNGSGKTTLLDAMRTLLAIKCSGKRDYK 59 Query: 85 DSIK 88 ++ Sbjct: 60 RYVR 63 >gi|312377980|gb|EFR24675.1| hypothetical protein AND_10572 [Anopheles darlingi] Length = 352 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + F +QKI F LT++ GQNG GK+++ E +++ G Sbjct: 26 IRFSGRRTKNLPSFLYLQKITFTTPLTLIVGQNGCGKTTVIECLKYGLTG 75 >gi|260581930|ref|ZP_05849726.1| recombinational DNA repair ATPase [Haemophilus influenzae NT127] gi|260095123|gb|EEW79015.1| recombinational DNA repair ATPase [Haemophilus influenzae NT127] Length = 359 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T + F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLNFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|226322399|ref|ZP_03797917.1| hypothetical protein COPCOM_00167 [Coprococcus comes ATCC 27758] gi|225209199|gb|EEG91553.1| hypothetical protein COPCOM_00167 [Coprococcus comes ATCC 27758] Length = 517 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ ++ + +F FT Q I D + I+ G+N GK++L ++ + +G ++R Sbjct: 1 MKITELILKNFGRFTNKQ-ILLTDGINIIYGENESGKTTLHTFLKGMLFGMERKRGR 56 >gi|195108475|ref|XP_001998818.1| GI23422 [Drosophila mojavensis] gi|193915412|gb|EDW14279.1| GI23422 [Drosophila mojavensis] Length = 1104 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ I + +F + + IEF ++ + G NG GKS++ A+ G + SI Sbjct: 80 KIISIRLKNFMCHSHLY-IEFGPNINFLVGSNGSGKSAVIAALALGLAGSARNTSRASSI 138 Query: 88 KKR 90 +K Sbjct: 139 QKL 141 >gi|145628067|ref|ZP_01783868.1| recombination protein F [Haemophilus influenzae 22.1-21] gi|144979842|gb|EDJ89501.1| recombination protein F [Haemophilus influenzae 22.1-21] Length = 359 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T + F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLNFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|314937234|ref|ZP_07844579.1| conserved hypothetical protein [Staphylococcus hominis subsp. hominis C80] gi|313654667|gb|EFS18414.1| conserved hypothetical protein [Staphylococcus hominis subsp. hominis C80] Length = 618 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL I+I FR + I + T + G N GKSS+ +AI++L Sbjct: 1 MKLKSIKIEGFRKHYSTEVI--CEDTTFLIGPNNAGKSSVLKAIKYLL 46 >gi|283836133|ref|ZP_06355874.1| hypothetical protein CIT292_10554 [Citrobacter youngae ATCC 29220] gi|291068322|gb|EFE06431.1| DNA replication and repair protein RecF [Citrobacter youngae ATCC 29220] Length = 357 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|237729022|ref|ZP_04559503.1| recombination protein F [Citrobacter sp. 30_2] gi|226909644|gb|EEH95562.1| recombination protein F [Citrobacter sp. 30_2] Length = 357 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|224023819|ref|ZP_03642185.1| hypothetical protein BACCOPRO_00535 [Bacteroides coprophilus DSM 18228] gi|224017041|gb|EEF75053.1| hypothetical protein BACCOPRO_00535 [Bacteroides coprophilus DSM 18228] Length = 374 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E + F+ + + G+NG GK++L +A+ +L + + Sbjct: 1 MWLKRISILNYKNL-EQVDLAFSRKMNCIIGRNGMGKTNLMDAVYYLSFCKSATN 54 >gi|170755097|ref|YP_001781428.1| DNA repair protein recN [Clostridium botulinum B1 str. Okra] gi|169120309|gb|ACA44145.1| DNA repair protein RecN [Clostridium botulinum B1 str. Okra] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|153938947|ref|YP_001391199.1| DNA repair protein recN [Clostridium botulinum F str. Langeland] gi|152934843|gb|ABS40341.1| DNA repair protein RecN [Clostridium botulinum F str. Langeland] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|154320740|ref|XP_001559686.1| hypothetical protein BC1G_01842 [Botryotinia fuckeliana B05.10] gi|150853531|gb|EDN28723.1| hypothetical protein BC1G_01842 [Botryotinia fuckeliana B05.10] Length = 1310 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 32 IEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F + I F LT++ G NG GK+++ E +++ G Sbjct: 1 MRICGVRSFDHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTG 47 >gi|117618875|ref|YP_854530.1| DNA replication and repair protein RecF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560282|gb|ABK37230.1| DNA replication and repair protein RecF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 367 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ +++S FR + + + L I+ G NG GK+S+ EAI +L G + R Sbjct: 1 MSLVKLQLSDFRNI-QQASLALSPGLNILVGCNGSGKTSVLEAIHYLGLGRSFRTHLTGR 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 VIRQGER 66 >gi|322653325|gb|EFY49658.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] Length = 1061 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|322618783|gb|EFY15671.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] Length = 345 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|322614677|gb|EFY11606.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322623490|gb|EFY20329.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629212|gb|EFY25991.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631932|gb|EFY28686.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637330|gb|EFY34032.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642016|gb|EFY38626.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646221|gb|EFY42735.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652512|gb|EFY48866.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322660526|gb|EFY56762.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664678|gb|EFY60871.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669269|gb|EFY65419.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670815|gb|EFY66948.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678947|gb|EFY75002.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681975|gb|EFY78000.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685196|gb|EFY81193.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194456|gb|EFZ79651.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197008|gb|EFZ82150.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203992|gb|EFZ89009.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206922|gb|EFZ91875.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211062|gb|EFZ95918.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214550|gb|EFZ99301.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223107|gb|EGA07450.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227056|gb|EGA11237.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230126|gb|EGA14246.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233864|gb|EGA17953.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238442|gb|EGA22500.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244130|gb|EGA28139.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246290|gb|EGA30273.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251916|gb|EGA35779.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257913|gb|EGA41592.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261074|gb|EGA44666.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264996|gb|EGA48495.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272559|gb|EGA55966.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|297584551|ref|YP_003700331.1| DNA repair protein RecN [Bacillus selenitireducens MLS10] gi|297143008|gb|ADH99765.1| DNA repair protein RecN [Bacillus selenitireducens MLS10] Length = 569 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I F E I F LT++ G+ G GKS + +AI L G R D ++ Sbjct: 2 LLELTIKDF-AIIERVTISFEGGLTVMTGETGAGKSIIIDAIGQLIGG----RGSADFVR 56 Query: 89 KRSIKTPMP 97 S + + Sbjct: 57 HASKRAEIE 65 >gi|283834290|ref|ZP_06354031.1| nuclease sbcCD, subunit C [Citrobacter youngae ATCC 29220] gi|291069816|gb|EFE07925.1| nuclease sbcCD, subunit C [Citrobacter youngae ATCC 29220] Length = 1049 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|257080653|ref|ZP_05575014.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988683|gb|EEU75985.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 433 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +E+ + + + + LTI+ G N GK+S+ +AI W G + Sbjct: 1 MKINSLEVENVKRVKAVVIQPNENGLTILGGNNNQGKTSVLDAIAWGLGGNKYK 54 >gi|253747245|gb|EET02057.1| SMC3-like protein [Giardia intestinalis ATCC 50581] Length = 1230 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++EI +FR + + G NG GKS+ AI + Sbjct: 1 MYLSEVEIKNFRSIVYASVTGLHPGINVFVGINGAGKSNFYGAILFAL 48 >gi|238911471|ref|ZP_04655308.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|229044090|ref|ZP_04191777.1| Exonuclease [Bacillus cereus AH676] gi|228725261|gb|EEL76531.1| Exonuclease [Bacillus cereus AH676] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229109782|ref|ZP_04239367.1| Exonuclease [Bacillus cereus Rock1-15] gi|228673627|gb|EEL28886.1| Exonuclease [Bacillus cereus Rock1-15] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229127737|ref|ZP_04256726.1| Exonuclease [Bacillus cereus BDRD-Cer4] gi|229144935|ref|ZP_04273332.1| Exonuclease [Bacillus cereus BDRD-ST24] gi|228638657|gb|EEK95090.1| Exonuclease [Bacillus cereus BDRD-ST24] gi|228655814|gb|EEL11663.1| Exonuclease [Bacillus cereus BDRD-Cer4] Length = 1022 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|237730367|ref|ZP_04560848.1| exonuclease subunit SbcC [Citrobacter sp. 30_2] gi|226905906|gb|EEH91824.1| exonuclease subunit SbcC [Citrobacter sp. 30_2] Length = 1047 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|224582231|ref|YP_002636029.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466758|gb|ACN44588.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213647673|ref|ZP_03377726.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 467 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213621116|ref|ZP_03373899.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 573 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213581814|ref|ZP_03363640.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 641 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213427750|ref|ZP_03360500.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 311 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213417374|ref|ZP_03350516.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 425 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|213028816|ref|ZP_03343263.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 282 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|207855877|ref|YP_002242528.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707680|emb|CAR31964.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|205351707|ref|YP_002225508.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271488|emb|CAR36306.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626739|gb|EGE33082.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|187779518|ref|ZP_02995991.1| hypothetical protein CLOSPO_03114 [Clostridium sporogenes ATCC 15579] gi|187773143|gb|EDU36945.1| hypothetical protein CLOSPO_03114 [Clostridium sporogenes ATCC 15579] Length = 567 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|168819000|ref|ZP_02831000.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344226|gb|EDZ30990.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084668|emb|CBY94459.1| Nuclease sbcCD subunit C [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|200390418|ref|ZP_03217029.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602863|gb|EDZ01409.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168465479|ref|ZP_02699361.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631639|gb|EDX50159.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168261177|ref|ZP_02683150.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349981|gb|EDZ36612.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|194446724|ref|YP_002039635.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405387|gb|ACF65609.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168240212|ref|ZP_02665144.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447683|ref|YP_002044428.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194405987|gb|ACF66206.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339765|gb|EDZ26529.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|204927205|ref|ZP_03218407.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323870|gb|EDZ09065.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|197247629|ref|YP_002145376.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211332|gb|ACH48729.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168237504|ref|ZP_02662562.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735358|ref|YP_002113426.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710860|gb|ACF90081.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289539|gb|EDY28902.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|168232363|ref|ZP_02657421.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468973|ref|ZP_03074957.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455337|gb|EDX44176.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333331|gb|EDZ20095.1| putative RecF/RecN/SMC N domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|198245472|ref|YP_002214349.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939988|gb|ACH77321.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622097|gb|EGE28442.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|167551800|ref|ZP_02345553.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323409|gb|EDZ11248.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|197262948|ref|ZP_03163022.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197241203|gb|EDY23823.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|161615424|ref|YP_001589389.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364788|gb|ABX68556.1| hypothetical protein SPAB_03195 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|161504420|ref|YP_001571532.1| exonuclease subunit SbcC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865767|gb|ABX22390.1| hypothetical protein SARI_02531 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|157146997|ref|YP_001454316.1| exonuclease subunit SbcC [Citrobacter koseri ATCC BAA-895] gi|157084202|gb|ABV13880.1| hypothetical protein CKO_02774 [Citrobacter koseri ATCC BAA-895] Length = 1047 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|62179006|ref|YP_215423.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126639|gb|AAX64342.1| ATP-dependent dsDNA exonuclease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713464|gb|EFZ05035.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|56414450|ref|YP_151525.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363371|ref|YP_002143008.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128707|gb|AAV78213.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094848|emb|CAR60381.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|16763775|ref|NP_459390.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992239|ref|ZP_02573337.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16418898|gb|AAL19349.1| ATP-dependent dsDNA exonuclease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205329493|gb|EDZ16257.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245678|emb|CBG23474.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992102|gb|ACY86987.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157007|emb|CBW16490.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911427|dbj|BAJ35401.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323128711|gb|ADX16141.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987343|gb|AEF06326.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 1046 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|29142857|ref|NP_806199.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|29138489|gb|AAO70059.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 1036 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|16759372|ref|NP_454989.1| exonuclease subunit SbcC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|25300681|pir||AB0551 exonuclease SbcC [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501663|emb|CAD08850.1| exonuclease SbcC [Salmonella enterica subsp. enterica serovar Typhi] Length = 1034 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|328884975|emb|CCA58214.1| hypothetical protein SVEN_4928 [Streptomyces venezuelae ATCC 10712] Length = 838 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + F+G T I+ + ++I +G NG GKS++++ I G T Sbjct: 80 IKGLRLCGFQGTTSELSMTIDPSPGISIYHGPNGSGKSTIADGIRTAMSGKT 131 >gi|289642468|ref|ZP_06474613.1| DNA replication and repair protein RecF [Frankia symbiont of Datisca glomerata] gi|289507727|gb|EFD28681.1| DNA replication and repair protein RecF [Frankia symbiont of Datisca glomerata] Length = 469 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + + FR + + + A + G NG GK++L EA+ +L + R Sbjct: 1 MRLTHLSLVDFRSYPALDLL-LAPGVNTFVGSNGQGKTNLLEAVGYLATLGSHRVASDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVREG 64 >gi|242373643|ref|ZP_04819217.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W1] gi|242348611|gb|EES40213.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W1] Length = 1009 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K + +++++F F I+F+ + L +++G+ G GK+ + +AI + +G + Sbjct: 1 MKPIKLQLNNFGPFLNET-IDFSQIENNQLFLISGKTGSGKTMIFDAIVYALFGKASTEN 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + D ++ PM + Sbjct: 60 RKEDDLRSHFADGKSPMSV 78 >gi|226356387|ref|YP_002786127.1| recombination protein F [Deinococcus deserti VCD115] gi|259563361|sp|C1CW06|RECF_DEIDV RecName: Full=DNA replication and repair protein recF gi|226318377|gb|ACO46373.1| putative DNA replication and repair protein RecF [Deinococcus deserti VCD115] Length = 363 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + ++R + F +T V G+NG GK++L EA G T Sbjct: 4 VQLESLSTLNYRNLA-PCTLSFPAGVTGVFGENGAGKTNLLEAAYLALTGLT 54 >gi|206901870|ref|YP_002251259.1| DNA replication and repair protein RecF [Dictyoglomus thermophilum H-6-12] gi|206740973|gb|ACI20031.1| DNA replication and repair protein RecF [Dictyoglomus thermophilum H-6-12] Length = 359 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+D+ + +FR + + F D + I G+N GK+++ E+I +LF G + R K+ Sbjct: 1 MRLIDLRVVNFRNLKNLN-LNFFD-VNIFYGENAQGKTNILESIYFLFSGKSFRTKNERE 58 Query: 87 IKKRSIKT 94 I + ++ Sbjct: 59 IIRWGEES 66 >gi|220931249|ref|YP_002508157.1| Exodeoxyribonuclease I subunit C [Halothermothrix orenii H 168] gi|219992559|gb|ACL69162.1| Exodeoxyribonuclease I subunit C [Halothermothrix orenii H 168] Length = 1108 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + L ++IS F + + I F L + G G GKSS+ +AI YG R Sbjct: 1 MRPLLLKISGLNSFVQEEIINFKKLTEKGLFGIFGPTGSGKSSILDAITIALYGKIAR 58 >gi|240147381|ref|ZP_04745982.1| conserved hypothetical protein [Roseburia intestinalis L1-82] gi|257200421|gb|EEU98705.1| conserved hypothetical protein [Roseburia intestinalis L1-82] Length = 164 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHG 84 KL I I +F+ E+ KI+ ++ I+ GQN GK+++ EAI F Y + G Sbjct: 1 MKLTGIHIKNFKAIHEM-KIDSIENALILVGQNNTGKTTILEAIRAAFGDYHISAEDFDG 59 Query: 85 D 85 D Sbjct: 60 D 60 >gi|296804972|ref|XP_002843313.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238845915|gb|EEQ35577.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1146 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 96 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 154 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 +K + R K Q Sbjct: 155 -SFVKEGKESATIIVRIKNQ 173 >gi|284033069|ref|YP_003383000.1| AAA ATPase [Kribbella flavida DSM 17836] gi|283812362|gb|ADB34201.1| AAA ATPase [Kribbella flavida DSM 17836] Length = 239 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 30/59 (50%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 ++ +T + G+NG GKS+L EA+ F + G + R+ ++P+ + + R Sbjct: 38 LDLGPGVTFLVGENGAGKSTLVEAVAVAFGMSPEGGSTGARLTTRASESPLSQDLVLTR 96 >gi|160896343|ref|YP_001561925.1| SMC domain-containing protein [Delftia acidovorans SPH-1] gi|160361927|gb|ABX33540.1| SMC domain protein [Delftia acidovorans SPH-1] Length = 1165 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + +I+F + L + G G GKS+L +AI Y T R Sbjct: 1 MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR 60 >gi|322806127|emb|CBZ03695.1| DNA repair protein RecN [Clostridium botulinum H04402 065] Length = 567 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|300721092|ref|YP_003710360.1| gap repair protein [Xenorhabdus nematophila ATCC 19061] gi|297627577|emb|CBJ88096.1| gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus nematophila ATCC 19061] Length = 363 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FR + A + G NG GK+S+ EAI L +G R + Sbjct: 3 LSRLLIRDFRNIA-NADLPLATGFNFLVGPNGSGKTSILEAIYTLGHGRAFRSIQAGRVI 61 Query: 89 K 89 + Sbjct: 62 R 62 >gi|288574518|ref|ZP_06392875.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570259|gb|EFC91816.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 1194 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +LL + + I+F D L + G G GKS++ +A+ YG T R Sbjct: 1 MRLLRLRFKNLNSLEGRWSIDFRDQRYLDDCLFAIVGPTGSGKSTVLDALCLALYGRTPR 60 Query: 81 --RKHGDSIKKRSIKT 94 R G + S KT Sbjct: 61 LSRVTGSENEIMSRKT 76 >gi|160331871|ref|XP_001712642.1| smc4 [Hemiselmis andersenii] gi|159766091|gb|ABW98317.1| smc4 [Hemiselmis andersenii] Length = 1248 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I ++F+ + IQ+ + + G NG GKS+ +AI ++ Sbjct: 5 IFLKSIRFTNFKSYKGIQEAGPCHPKINTIIGPNGSGKSNFLDAILFVLG 54 >gi|67924115|ref|ZP_00517561.1| DNA repair protein RecN [Crocosphaera watsonii WH 8501] gi|67854040|gb|EAM49353.1| DNA repair protein RecN [Crocosphaera watsonii WH 8501] Length = 591 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I +F + ++F+ L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSLLQIKNF-ALVDRLTLQFSQGLNVLTGETGAGKSIILDAIDVVLGGKVNNRL 54 >gi|324111251|gb|EGC05233.1| DNA repair protein RecN [Escherichia fergusonii B253] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|323978475|gb|EGB73558.1| DNA repair protein RecN [Escherichia coli TW10509] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|323188393|gb|EFZ73682.1| DNA repair protein RecN [Escherichia coli RN587/1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|320657044|gb|EFX24867.1| recombination and repair protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|320198388|gb|EFW72990.1| DNA repair protein RecN [Escherichia coli EC4100B] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|320177033|gb|EFW52054.1| DNA repair protein RecN [Shigella dysenteriae CDC 74-1112] gi|320183097|gb|EFW57959.1| DNA repair protein RecN [Shigella flexneri CDC 796-83] gi|332091818|gb|EGI96896.1| DNA repair protein RecN [Shigella boydii 3594-74] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|315253143|gb|EFU33111.1| putative DNA repair protein RecN [Escherichia coli MS 85-1] Length = 368 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|331684271|ref|ZP_08384863.1| DNA repair protein RecN [Escherichia coli H299] gi|331077886|gb|EGI49092.1| DNA repair protein RecN [Escherichia coli H299] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|331674055|ref|ZP_08374817.1| DNA repair protein RecN [Escherichia coli TA280] gi|331068794|gb|EGI40187.1| DNA repair protein RecN [Escherichia coli TA280] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|331664181|ref|ZP_08365090.1| DNA repair protein RecN [Escherichia coli TA143] gi|331058638|gb|EGI30616.1| DNA repair protein RecN [Escherichia coli TA143] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|331654072|ref|ZP_08355072.1| DNA repair protein RecN [Escherichia coli M718] gi|331047454|gb|EGI19531.1| DNA repair protein RecN [Escherichia coli M718] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|331648358|ref|ZP_08349446.1| DNA repair protein RecN [Escherichia coli M605] gi|330912377|gb|EGH40887.1| DNA repair protein RecN [Escherichia coli AA86] gi|331042105|gb|EGI14247.1| DNA repair protein RecN [Escherichia coli M605] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|307129571|ref|YP_003881587.1| putative ATPase involved in DNA repair [Dickeya dadantii 3937] gi|306527100|gb|ADM97030.1| Possible ATPase involved in DNA repair [Dickeya dadantii 3937] Length = 683 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 13/80 (16%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEW 72 RK+ + + + +FR F I+ A + + G NG GK+S+ AI Sbjct: 11 RKMNVLIKQLVLHNFRVFCGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRL 70 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 YG R G +++++ Sbjct: 71 ALYG---RLAFGSAMQQQEY 87 >gi|306812467|ref|ZP_07446665.1| recombination and repair protein [Escherichia coli NC101] gi|305854505|gb|EFM54943.1| recombination and repair protein [Escherichia coli NC101] gi|324005814|gb|EGB75033.1| DNA repair protein RecN [Escherichia coli MS 57-2] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|301644058|ref|ZP_07244074.1| DNA repair protein RecN [Escherichia coli MS 146-1] gi|301077603|gb|EFK92409.1| DNA repair protein RecN [Escherichia coli MS 146-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|300819936|ref|ZP_07100118.1| DNA repair protein RecN [Escherichia coli MS 107-1] gi|300527477|gb|EFK48539.1| DNA repair protein RecN [Escherichia coli MS 107-1] Length = 569 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 18 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 68 >gi|300930658|ref|ZP_07146045.1| DNA repair protein RecN [Escherichia coli MS 187-1] gi|300461478|gb|EFK24971.1| DNA repair protein RecN [Escherichia coli MS 187-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|300940954|ref|ZP_07155478.1| DNA repair protein RecN [Escherichia coli MS 21-1] gi|300454278|gb|EFK17771.1| DNA repair protein RecN [Escherichia coli MS 21-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|301026399|ref|ZP_07189843.1| DNA repair protein RecN [Escherichia coli MS 69-1] gi|300395546|gb|EFJ79084.1| DNA repair protein RecN [Escherichia coli MS 69-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|300949011|ref|ZP_07163064.1| DNA repair protein RecN [Escherichia coli MS 116-1] gi|300957401|ref|ZP_07169615.1| DNA repair protein RecN [Escherichia coli MS 175-1] gi|300315836|gb|EFJ65620.1| DNA repair protein RecN [Escherichia coli MS 175-1] gi|300451538|gb|EFK15158.1| DNA repair protein RecN [Escherichia coli MS 116-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|300990714|ref|ZP_07179299.1| DNA repair protein RecN [Escherichia coli MS 200-1] gi|300305682|gb|EFJ60202.1| DNA repair protein RecN [Escherichia coli MS 200-1] gi|315284843|gb|EFU44288.1| DNA repair protein RecN [Escherichia coli MS 110-3] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|293412005|ref|ZP_06654728.1| DNA repair protein RecN [Escherichia coli B354] gi|291468776|gb|EFF11267.1| DNA repair protein RecN [Escherichia coli B354] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|284922561|emb|CBG35648.1| DNA repair protein [Escherichia coli 042] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|281179661|dbj|BAI55991.1| DNA repair protein RecN [Escherichia coli SE15] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|260596317|ref|YP_003208888.1| hypothetical protein CTU_05250 [Cronobacter turicensis z3032] gi|260215494|emb|CBA27633.1| hypothetical protein CTU_05250 [Cronobacter turicensis z3032] Length = 678 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 13/80 (16%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEW 72 RK+ + + + +FR F I+ A + + G NG GK+S+ AI Sbjct: 6 RKMNVLIKQLVLHNFRVFCGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRL 65 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 YG R G +++++ Sbjct: 66 ALYG---RLAFGSAMQQQEY 82 >gi|222034317|emb|CAP77058.1| DNA repair protein recN [Escherichia coli LF82] gi|312947187|gb|ADR28014.1| recombination and repair protein [Escherichia coli O83:H1 str. NRG 857C] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|218706116|ref|YP_002413635.1| recombination and repair protein [Escherichia coli UMN026] gi|293406122|ref|ZP_06650048.1| recombination and repair protein [Escherichia coli FVEC1412] gi|298381856|ref|ZP_06991453.1| DNA repair protein RecN [Escherichia coli FVEC1302] gi|300900197|ref|ZP_07118386.1| DNA repair protein RecN [Escherichia coli MS 198-1] gi|218433213|emb|CAR14111.1| recombination and repair protein [Escherichia coli UMN026] gi|291426128|gb|EFE99160.1| recombination and repair protein [Escherichia coli FVEC1412] gi|298276996|gb|EFI18512.1| DNA repair protein RecN [Escherichia coli FVEC1302] gi|300356312|gb|EFJ72182.1| DNA repair protein RecN [Escherichia coli MS 198-1] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|218690733|ref|YP_002398945.1| recombination and repair protein [Escherichia coli ED1a] gi|218428297|emb|CAR09074.1| recombination and repair protein [Escherichia coli ED1a] gi|320194778|gb|EFW69407.1| DNA repair protein RecN [Escherichia coli WV_060327] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|218701127|ref|YP_002408756.1| recombination and repair protein [Escherichia coli IAI39] gi|218371113|emb|CAR18941.1| recombination and repair protein [Escherichia coli IAI39] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|218547866|ref|YP_002381657.1| recombination and repair protein [Escherichia fergusonii ATCC 35469] gi|218355407|emb|CAQ88016.1| recombination and repair protein [Escherichia fergusonii ATCC 35469] gi|323963924|gb|EGB59417.1| DNA repair protein RecN [Escherichia coli M863] gi|325496317|gb|EGC94176.1| recombination and repair protein [Escherichia fergusonii ECD227] gi|327252321|gb|EGE63993.1| DNA repair protein RecN [Escherichia coli STEC_7v] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|217326827|ref|ZP_03442910.1| DNA repair protein RecN [Escherichia coli O157:H7 str. TW14588] gi|217319194|gb|EEC27619.1| DNA repair protein RecN [Escherichia coli O157:H7 str. TW14588] Length = 522 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|170766151|ref|ZP_02900962.1| DNA repair protein RecN [Escherichia albertii TW07627] gi|170125297|gb|EDS94228.1| DNA repair protein RecN [Escherichia albertii TW07627] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|168789518|ref|ZP_02814525.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC869] gi|261227498|ref|ZP_05941779.1| recombination and repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255692|ref|ZP_05948225.1| recombination and repair protein [Escherichia coli O157:H7 str. FRIK966] gi|189370855|gb|EDU89271.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC869] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|170683348|ref|YP_001744799.1| recombination and repair protein [Escherichia coli SMS-3-5] gi|170521066|gb|ACB19244.1| DNA repair protein RecN [Escherichia coli SMS-3-5] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|229580808|ref|YP_002839207.1| hypothetical protein YN1551_0087 [Sulfolobus islandicus Y.N.15.51] gi|228011524|gb|ACP47285.1| conserved hypothetical protein [Sulfolobus islandicus Y.N.15.51] Length = 495 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +S+FR +E+ + +V G NGYGK++L +I +LF S Sbjct: 1 MRITEFYVSNFRSLSEVNLKDLG-GFNVVVGYNGYGKTNLFSSI-FLFIKNLSAGIEKRS 58 Query: 87 IKKRSIK 93 ++ R+ + Sbjct: 59 VEDRNQE 65 >gi|148379838|ref|YP_001254379.1| DNA repair protein recN [Clostridium botulinum A str. ATCC 3502] gi|153932953|ref|YP_001384136.1| DNA repair protein recN [Clostridium botulinum A str. ATCC 19397] gi|153937847|ref|YP_001387676.1| DNA repair protein recN [Clostridium botulinum A str. Hall] gi|148289322|emb|CAL83418.1| DNA repair protein [Clostridium botulinum A str. ATCC 3502] gi|152928997|gb|ABS34497.1| DNA repair protein RecN [Clostridium botulinum A str. ATCC 19397] gi|152933761|gb|ABS39260.1| DNA repair protein RecN [Clostridium botulinum A str. Hall] Length = 567 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F E I F ++ G+ G GKS L +AI ++ G R Sbjct: 2 LLQLNIKNF-ALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDL 54 >gi|118785609|ref|XP_557814.2| AGAP008672-PA [Anopheles gambiae str. PEST] gi|116127816|gb|EAL40260.2| AGAP008672-PA [Anopheles gambiae str. PEST] Length = 1214 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 30 LDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 I I+ F+ + +E +V G+NG GKS+ AIE++ Sbjct: 5 RQIIINGFKSYKLQTVVERLDPKHNVVVGRNGSGKSNFFSAIEFVL 50 >gi|82777974|ref|YP_404323.1| recombination and repair protein [Shigella dysenteriae Sd197] gi|309784640|ref|ZP_07679275.1| DNA repair protein RecN [Shigella dysenteriae 1617] gi|81242122|gb|ABB62832.1| protein used in recombination and DNA repair [Shigella dysenteriae Sd197] gi|308927537|gb|EFP73009.1| DNA repair protein RecN [Shigella dysenteriae 1617] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|82545159|ref|YP_409106.1| recombination and repair protein [Shigella boydii Sb227] gi|81246570|gb|ABB67278.1| protein used in recombination and DNA repair [Shigella boydii Sb227] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|58336807|ref|YP_193392.1| hypothetical protein LBA0476 [Lactobacillus acidophilus NCFM] gi|58254124|gb|AAV42361.1| hypothetical protein LBA0476 [Lactobacillus acidophilus NCFM] Length = 582 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 23/41 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + D+ I +R F + IE + HLT + G NG GKS++ Sbjct: 1 MWIKDLNIKDYRAFQKETNIELSKHLTAIAGMNGVGKSTIL 41 >gi|1033112|gb|AAA79786.1| CG Site No. 10872; alternate name radB; a frame- shift error in GenBank Accession Number Y00357 changes the C-terminal end of the gene [Escherichia coli str. K-12 substr. MG1655] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|24113953|ref|NP_708463.1| recombination and repair protein [Shigella flexneri 2a str. 301] gi|30064014|ref|NP_838185.1| recombination and repair protein [Shigella flexneri 2a str. 2457T] gi|110806717|ref|YP_690237.1| recombination and repair protein [Shigella flexneri 5 str. 8401] gi|24053062|gb|AAN44170.1| DNA repair protein RecN [Shigella flexneri 2a str. 301] gi|30042270|gb|AAP17995.1| DNA repair protein RecN [Shigella flexneri 2a str. 2457T] gi|110616265|gb|ABF04932.1| DNA repair protein recN [Shigella flexneri 5 str. 8401] gi|281602025|gb|ADA75009.1| DNA repair protein RecN [Shigella flexneri 2002017] gi|313648294|gb|EFS12738.1| DNA repair protein RecN [Shigella flexneri 2a str. 2457T] gi|332753362|gb|EGJ83742.1| DNA repair protein RecN [Shigella flexneri 4343-70] gi|332754041|gb|EGJ84413.1| DNA repair protein RecN [Shigella flexneri K-671] gi|332755600|gb|EGJ85963.1| DNA repair protein RecN [Shigella flexneri 2747-71] gi|332765594|gb|EGJ95807.1| DNA repair protein RecN [Shigella flexneri 2930-71] gi|332999391|gb|EGK18976.1| DNA repair protein RecN [Shigella flexneri VA-6] gi|333000789|gb|EGK20363.1| DNA repair protein RecN [Shigella flexneri K-218] gi|333000988|gb|EGK20558.1| DNA repair protein RecN [Shigella flexneri K-272] gi|333015508|gb|EGK34847.1| DNA repair protein RecN [Shigella flexneri K-227] gi|333015814|gb|EGK35150.1| DNA repair protein RecN [Shigella flexneri K-304] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|42693|emb|CAA68435.1| unnamed protein product [Escherichia coli K-12] Length = 567 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|15803136|ref|NP_289168.1| recombination and repair protein [Escherichia coli O157:H7 EDL933] gi|15832732|ref|NP_311505.1| recombination and repair protein [Escherichia coli O157:H7 str. Sakai] gi|168755358|ref|ZP_02780365.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4401] gi|168762408|ref|ZP_02787415.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4501] gi|168768703|ref|ZP_02793710.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4486] gi|168800495|ref|ZP_02825502.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC508] gi|195939667|ref|ZP_03085049.1| recombination and repair protein [Escherichia coli O157:H7 str. EC4024] gi|208809614|ref|ZP_03251951.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4206] gi|208812442|ref|ZP_03253771.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4045] gi|208819371|ref|ZP_03259691.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4042] gi|209397502|ref|YP_002272085.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4115] gi|254794561|ref|YP_003079398.1| recombination and repair protein [Escherichia coli O157:H7 str. TW14359] gi|291283887|ref|YP_003500705.1| recombination and repair protein [Escherichia coli O55:H7 str. CB9615] gi|12517040|gb|AAG57726.1|AE005491_6 protein used in recombination and DNA repair [Escherichia coli O157:H7 str. EDL933] gi|13362949|dbj|BAB36901.1| DNA repair protein RecN [Escherichia coli O157:H7 str. Sakai] gi|189357331|gb|EDU75750.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4401] gi|189362141|gb|EDU80560.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4486] gi|189367302|gb|EDU85718.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4501] gi|189377148|gb|EDU95564.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC508] gi|208729415|gb|EDZ79016.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4206] gi|208733719|gb|EDZ82406.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4045] gi|208739494|gb|EDZ87176.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4042] gi|209158902|gb|ACI36335.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4115] gi|209762488|gb|ACI79556.1| DNA repair protein RecN [Escherichia coli] gi|209762490|gb|ACI79557.1| DNA repair protein RecN [Escherichia coli] gi|209762492|gb|ACI79558.1| DNA repair protein RecN [Escherichia coli] gi|209762494|gb|ACI79559.1| DNA repair protein RecN [Escherichia coli] gi|209762496|gb|ACI79560.1| DNA repair protein RecN [Escherichia coli] gi|254593961|gb|ACT73322.1| recombination and repair protein [Escherichia coli O157:H7 str. TW14359] gi|290763760|gb|ADD57721.1| recombination and repair protein [Escherichia coli O55:H7 str. CB9615] gi|320188949|gb|EFW63608.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC1212] gi|320640798|gb|EFX10296.1| recombination and repair protein [Escherichia coli O157:H7 str. G5101] gi|320646143|gb|EFX15088.1| recombination and repair protein [Escherichia coli O157:H- str. 493-89] gi|320651440|gb|EFX19841.1| recombination and repair protein [Escherichia coli O157:H- str. H 2687] gi|320662708|gb|EFX30052.1| recombination and repair protein [Escherichia coli O55:H7 str. USDA 5905] gi|320667525|gb|EFX34449.1| recombination and repair protein [Escherichia coli O157:H7 str. LSU-61] gi|326344366|gb|EGD68124.1| DNA repair protein RecN [Escherichia coli O157:H7 str. 1125] gi|326347735|gb|EGD71452.1| DNA repair protein RecN [Escherichia coli O157:H7 str. 1044] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|194439433|ref|ZP_03071509.1| DNA repair protein RecN [Escherichia coli 101-1] gi|253772491|ref|YP_003035322.1| recombination and repair protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162585|ref|YP_003045693.1| recombination and repair protein [Escherichia coli B str. REL606] gi|312973141|ref|ZP_07787314.1| DNA repair protein RecN [Escherichia coli 1827-70] gi|194421609|gb|EDX37620.1| DNA repair protein RecN [Escherichia coli 101-1] gi|242378210|emb|CAQ32985.1| protein used in recombination and DNA repair [Escherichia coli BL21(DE3)] gi|253323535|gb|ACT28137.1| DNA repair protein RecN [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974486|gb|ACT40157.1| recombination and repair protein [Escherichia coli B str. REL606] gi|253978653|gb|ACT44323.1| recombination and repair protein [Escherichia coli BL21(DE3)] gi|310333083|gb|EFQ00297.1| DNA repair protein RecN [Escherichia coli 1827-70] gi|323960526|gb|EGB56155.1| DNA repair protein RecN [Escherichia coli H489] gi|323971441|gb|EGB66677.1| DNA repair protein RecN [Escherichia coli TA007] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|157157277|ref|YP_001463935.1| recombination and repair protein [Escherichia coli E24377A] gi|157079307|gb|ABV19015.1| DNA repair protein RecN [Escherichia coli E24377A] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|194427848|ref|ZP_03060394.1| DNA repair protein RecN [Escherichia coli B171] gi|194414081|gb|EDX30357.1| DNA repair protein RecN [Escherichia coli B171] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|187731758|ref|YP_001881406.1| recombination and repair protein [Shigella boydii CDC 3083-94] gi|187428750|gb|ACD08024.1| DNA repair protein RecN [Shigella boydii CDC 3083-94] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|49176247|ref|YP_026172.1| recombination and repair protein [Escherichia coli str. K-12 substr. MG1655] gi|74313205|ref|YP_311624.1| recombination and repair protein [Shigella sonnei Ss046] gi|89109416|ref|AP_003196.1| recombination and repair protein [Escherichia coli str. K-12 substr. W3110] gi|157162091|ref|YP_001459409.1| recombination and repair protein [Escherichia coli HS] gi|170019108|ref|YP_001724062.1| recombination and repair protein [Escherichia coli ATCC 8739] gi|170082218|ref|YP_001731538.1| recombination and repair protein [Escherichia coli str. K-12 substr. DH10B] gi|188492326|ref|ZP_02999596.1| DNA repair protein RecN [Escherichia coli 53638] gi|191167070|ref|ZP_03028891.1| DNA repair protein RecN [Escherichia coli B7A] gi|193065987|ref|ZP_03047046.1| DNA repair protein RecN [Escherichia coli E22] gi|193071256|ref|ZP_03052176.1| DNA repair protein RecN [Escherichia coli E110019] gi|194432959|ref|ZP_03065242.1| DNA repair protein RecN [Shigella dysenteriae 1012] gi|209920090|ref|YP_002294174.1| recombination and repair protein [Escherichia coli SE11] gi|218555195|ref|YP_002388108.1| recombination and repair protein [Escherichia coli IAI1] gi|218696239|ref|YP_002403906.1| recombination and repair protein [Escherichia coli 55989] gi|238901775|ref|YP_002927571.1| recombination and repair protein [Escherichia coli BW2952] gi|254037691|ref|ZP_04871749.1| recombination and repair protein [Escherichia sp. 1_1_43] gi|256019566|ref|ZP_05433431.1| recombination and repair protein [Shigella sp. D9] gi|256024858|ref|ZP_05438723.1| recombination and repair protein [Escherichia sp. 4_1_40B] gi|260845297|ref|YP_003223075.1| recombination and repair protein RecN [Escherichia coli O103:H2 str. 12009] gi|260856704|ref|YP_003230595.1| recombination and repair protein RecN [Escherichia coli O26:H11 str. 11368] gi|260869296|ref|YP_003235698.1| recombination and repair protein RecN [Escherichia coli O111:H- str. 11128] gi|293448967|ref|ZP_06663388.1| DNA repair protein RecN [Escherichia coli B088] gi|300825182|ref|ZP_07105272.1| DNA repair protein RecN [Escherichia coli MS 119-7] gi|300905063|ref|ZP_07122873.1| DNA repair protein RecN [Escherichia coli MS 84-1] gi|300921161|ref|ZP_07137539.1| DNA repair protein RecN [Escherichia coli MS 115-1] gi|300925609|ref|ZP_07141479.1| DNA repair protein RecN [Escherichia coli MS 182-1] gi|301026812|ref|ZP_07190214.1| DNA repair protein RecN [Escherichia coli MS 196-1] gi|301305739|ref|ZP_07211826.1| DNA repair protein RecN [Escherichia coli MS 124-1] gi|301326737|ref|ZP_07220051.1| DNA repair protein RecN [Escherichia coli MS 78-1] gi|307139336|ref|ZP_07498692.1| recombination and repair protein [Escherichia coli H736] gi|307315073|ref|ZP_07594657.1| DNA repair protein RecN [Escherichia coli W] gi|309794127|ref|ZP_07688551.1| DNA repair protein RecN [Escherichia coli MS 145-7] gi|331643332|ref|ZP_08344463.1| DNA repair protein RecN [Escherichia coli H736] gi|331669366|ref|ZP_08370212.1| DNA repair protein RecN [Escherichia coli TA271] gi|331678606|ref|ZP_08379280.1| DNA repair protein RecN [Escherichia coli H591] gi|332280689|ref|ZP_08393102.1| recombination and repair protein [Shigella sp. D9] gi|1710071|sp|P05824|RECN_ECOLI RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|1800021|dbj|BAA16501.1| recombination and repair protein [Escherichia coli str. K12 substr. W3110] gi|48994901|gb|AAT48145.1| recombination and repair protein [Escherichia coli str. K-12 substr. MG1655] gi|73856682|gb|AAZ89389.1| protein used in recombination and DNA repair [Shigella sonnei Ss046] gi|157067771|gb|ABV07026.1| DNA repair protein RecN [Escherichia coli HS] gi|169754036|gb|ACA76735.1| DNA repair protein RecN [Escherichia coli ATCC 8739] gi|169890053|gb|ACB03760.1| recombination and repair protein [Escherichia coli str. K-12 substr. DH10B] gi|188487525|gb|EDU62628.1| DNA repair protein RecN [Escherichia coli 53638] gi|190902852|gb|EDV62580.1| DNA repair protein RecN [Escherichia coli B7A] gi|192926401|gb|EDV81036.1| DNA repair protein RecN [Escherichia coli E22] gi|192955409|gb|EDV85892.1| DNA repair protein RecN [Escherichia coli E110019] gi|194418686|gb|EDX34772.1| DNA repair protein RecN [Shigella dysenteriae 1012] gi|209913349|dbj|BAG78423.1| DNA repair protein RecN [Escherichia coli SE11] gi|218352971|emb|CAU98771.1| recombination and repair protein [Escherichia coli 55989] gi|218361963|emb|CAQ99564.1| recombination and repair protein [Escherichia coli IAI1] gi|226839315|gb|EEH71336.1| recombination and repair protein [Escherichia sp. 1_1_43] gi|238863426|gb|ACR65424.1| recombination and repair protein [Escherichia coli BW2952] gi|257755353|dbj|BAI26855.1| recombination and repair protein RecN [Escherichia coli O26:H11 str. 11368] gi|257760444|dbj|BAI31941.1| recombination and repair protein RecN [Escherichia coli O103:H2 str. 12009] gi|257765652|dbj|BAI37147.1| recombination and repair protein RecN [Escherichia coli O111:H- str. 11128] gi|260448311|gb|ACX38733.1| DNA repair protein RecN [Escherichia coli DH1] gi|291322057|gb|EFE61486.1| DNA repair protein RecN [Escherichia coli B088] gi|299879558|gb|EFI87769.1| DNA repair protein RecN [Escherichia coli MS 196-1] gi|300403050|gb|EFJ86588.1| DNA repair protein RecN [Escherichia coli MS 84-1] gi|300411892|gb|EFJ95202.1| DNA repair protein RecN [Escherichia coli MS 115-1] gi|300418304|gb|EFK01615.1| DNA repair protein RecN [Escherichia coli MS 182-1] gi|300522344|gb|EFK43413.1| DNA repair protein RecN [Escherichia coli MS 119-7] gi|300838993|gb|EFK66753.1| DNA repair protein RecN [Escherichia coli MS 124-1] gi|300846597|gb|EFK74357.1| DNA repair protein RecN [Escherichia coli MS 78-1] gi|306905502|gb|EFN36036.1| DNA repair protein RecN [Escherichia coli W] gi|308122032|gb|EFO59294.1| DNA repair protein RecN [Escherichia coli MS 145-7] gi|309702995|emb|CBJ02326.1| DNA repair protein [Escherichia coli ETEC H10407] gi|315061929|gb|ADT76256.1| recombination and repair protein [Escherichia coli W] gi|315137233|dbj|BAJ44392.1| recombination and repair protein [Escherichia coli DH1] gi|315615315|gb|EFU95950.1| DNA repair protein RecN [Escherichia coli 3431] gi|320182471|gb|EFW57365.1| DNA repair protein RecN [Shigella boydii ATCC 9905] gi|323156270|gb|EFZ42429.1| DNA repair protein RecN [Escherichia coli EPECa14] gi|323159136|gb|EFZ45129.1| DNA repair protein RecN [Escherichia coli E128010] gi|323167739|gb|EFZ53434.1| DNA repair protein RecN [Shigella sonnei 53G] gi|323173067|gb|EFZ58698.1| DNA repair protein RecN [Escherichia coli LT-68] gi|323177258|gb|EFZ62846.1| DNA repair protein RecN [Escherichia coli 1180] gi|323184508|gb|EFZ69882.1| DNA repair protein RecN [Escherichia coli 1357] gi|323377491|gb|ADX49759.1| DNA repair protein RecN [Escherichia coli KO11] gi|323935670|gb|EGB31987.1| DNA repair protein RecN [Escherichia coli E1520] gi|323941367|gb|EGB37551.1| DNA repair protein RecN [Escherichia coli E482] gi|323946257|gb|EGB42290.1| DNA repair protein RecN [Escherichia coli H120] gi|324016598|gb|EGB85817.1| DNA repair protein RecN [Escherichia coli MS 117-3] gi|324120073|gb|EGC13949.1| DNA repair protein RecN [Escherichia coli E1167] gi|331036803|gb|EGI09027.1| DNA repair protein RecN [Escherichia coli H736] gi|331063034|gb|EGI34947.1| DNA repair protein RecN [Escherichia coli TA271] gi|331073436|gb|EGI44757.1| DNA repair protein RecN [Escherichia coli H591] gi|332088124|gb|EGI93249.1| DNA repair protein RecN [Shigella boydii 5216-82] gi|332089208|gb|EGI94315.1| DNA repair protein RecN [Shigella dysenteriae 155-74] gi|332103041|gb|EGJ06387.1| recombination and repair protein [Shigella sp. D9] gi|332344485|gb|AEE57819.1| DNA repair protein RecN [Escherichia coli UMNK88] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|26248980|ref|NP_755020.1| recombination and repair protein [Escherichia coli CFT073] gi|91211951|ref|YP_541937.1| recombination and repair protein [Escherichia coli UTI89] gi|110642776|ref|YP_670506.1| recombination and repair protein [Escherichia coli 536] gi|117624837|ref|YP_853750.1| recombination and repair protein [Escherichia coli APEC O1] gi|191171389|ref|ZP_03032938.1| DNA repair protein RecN [Escherichia coli F11] gi|218559535|ref|YP_002392448.1| recombination and repair protein [Escherichia coli S88] gi|227888182|ref|ZP_04005987.1| recombination and repair protein [Escherichia coli 83972] gi|237706796|ref|ZP_04537277.1| recombination and repair protein [Escherichia sp. 3_2_53FAA] gi|300986814|ref|ZP_07177803.1| DNA repair protein RecN [Escherichia coli MS 45-1] gi|301050487|ref|ZP_07197365.1| DNA repair protein RecN [Escherichia coli MS 185-1] gi|331658763|ref|ZP_08359705.1| DNA repair protein RecN [Escherichia coli TA206] gi|26109386|gb|AAN81588.1|AE016764_270 DNA repair protein recN [Escherichia coli CFT073] gi|91073525|gb|ABE08406.1| DNA repair protein RecN [Escherichia coli UTI89] gi|110344368|gb|ABG70605.1| DNA repair protein RecN [Escherichia coli 536] gi|115513961|gb|ABJ02036.1| DNA recombination and repair protein RecN [Escherichia coli APEC O1] gi|190908323|gb|EDV67913.1| DNA repair protein RecN [Escherichia coli F11] gi|218366304|emb|CAR04055.1| recombination and repair protein [Escherichia coli S88] gi|226899836|gb|EEH86095.1| recombination and repair protein [Escherichia sp. 3_2_53FAA] gi|227834822|gb|EEJ45288.1| recombination and repair protein [Escherichia coli 83972] gi|294493325|gb|ADE92081.1| DNA repair protein RecN [Escherichia coli IHE3034] gi|300297795|gb|EFJ54180.1| DNA repair protein RecN [Escherichia coli MS 185-1] gi|300407866|gb|EFJ91404.1| DNA repair protein RecN [Escherichia coli MS 45-1] gi|307554628|gb|ADN47403.1| ATPase involved in DNA repair [Escherichia coli ABU 83972] gi|307625835|gb|ADN70139.1| recombination and repair protein [Escherichia coli UM146] gi|315290943|gb|EFU50308.1| DNA repair protein RecN [Escherichia coli MS 153-1] gi|315298665|gb|EFU57919.1| DNA repair protein RecN [Escherichia coli MS 16-3] gi|323951186|gb|EGB47062.1| DNA repair protein RecN [Escherichia coli H252] gi|323957017|gb|EGB52743.1| DNA repair protein RecN [Escherichia coli H263] gi|324012454|gb|EGB81673.1| DNA repair protein RecN [Escherichia coli MS 60-1] gi|331053345|gb|EGI25374.1| DNA repair protein RecN [Escherichia coli TA206] Length = 553 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|283784212|ref|YP_003364077.1| exonuclease SbcC [Citrobacter rodentium ICC168] gi|282947666|emb|CBG87221.1| exonuclease SbcC [Citrobacter rodentium ICC168] Length = 1047 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + K++F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 >gi|282896259|ref|ZP_06304281.1| DNA repair protein RecN [Raphidiopsis brookii D9] gi|281198755|gb|EFA73634.1| DNA repair protein RecN [Raphidiopsis brookii D9] Length = 573 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +++F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LLSLRIDNF-ALIDQLELDFGPGLNVLTGETGAGKSIILDAIDAVLGGRVSSRV 54 >gi|229150562|ref|ZP_04278777.1| Exonuclease [Bacillus cereus m1550] gi|228632871|gb|EEK89485.1| Exonuclease [Bacillus cereus m1550] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSIELTFQLKGKRYEIK 87 >gi|281355719|ref|ZP_06242213.1| DNA repair protein RecN [Victivallis vadensis ATCC BAA-548] gi|281318599|gb|EFB02619.1| DNA repair protein RecN [Victivallis vadensis ATCC BAA-548] Length = 552 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+IS++ E ++EF +V G++G GKS L A+E L G R Sbjct: 2 LSFIKISNY-ALIERAELEFGPGFNVVTGESGAGKSILMGAVELLLGGRVDRSVVRTGAD 60 Query: 89 KRSI 92 + + Sbjct: 61 RCEV 64 >gi|119714067|ref|YP_919209.1| SMC domain-containing protein [Nocardioides sp. JS614] gi|119525976|gb|ABL79346.1| SMC domain protein [Nocardioides sp. JS614] Length = 533 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I I ++R F + +EFA L IV G N GKS+L EAI Sbjct: 2 LKKIAIRNYRTFKSFE-LEFAPDLNIVVGDNDAGKSTLLEAIGIALT 47 >gi|331002362|ref|ZP_08325880.1| hypothetical protein HMPREF0491_00742 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410178|gb|EGG89612.1| hypothetical protein HMPREF0491_00742 [Lachnospiraceae oral taxon 107 str. F0167] Length = 621 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL + I F F ++F+D++ I+ G N GKS++ I+ +FYG + + Sbjct: 1 MKLLSLHIDGFGKFKNKD-LQFSDNMNIIYGYNEAGKSTIFMFIKAMFYGLERAKGRASK 59 >gi|315047706|ref|XP_003173228.1| hypothetical protein MGYG_09099 [Arthroderma gypseum CBS 118893] gi|311343614|gb|EFR02817.1| hypothetical protein MGYG_09099 [Arthroderma gypseum CBS 118893] Length = 1130 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 89 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 147 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 +K + R K Q Sbjct: 148 -SFVKEGKESATIIVRIKNQ 166 >gi|254774305|ref|ZP_05215821.1| hypothetical protein MaviaA2_06510 [Mycobacterium avium subsp. avium ATCC 25291] Length = 876 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLTLTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|171910724|ref|ZP_02926194.1| SMC domain protein [Verrucomicrobium spinosum DSM 4136] Length = 920 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF------YGYTQR 80 + I + ++R E+ + L ++ G N GKS+L EA + G TQR Sbjct: 1 MRFKSITVRNYRVHREVT-VPLDPMLNVIGGPNEAGKSTLLEAARYALFLRARGGGETQR 59 Query: 81 RKH 83 H Sbjct: 60 SMH 62 >gi|118465536|ref|YP_880670.1| hypothetical protein MAV_1428 [Mycobacterium avium 104] gi|118166823|gb|ABK67720.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 876 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLTLTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|118350688|ref|XP_001008623.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila] gi|89290390|gb|EAR88378.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1238 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 37 FRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F+ + I+ F + G NG GKS++ ++I ++ Sbjct: 51 FKSYATRTIIKGFDQQFNAITGFNGSGKSNILDSILFVLG 90 >gi|41408591|ref|NP_961427.1| hypothetical protein MAP2493c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396949|gb|AAS04810.1| hypothetical protein MAP_2493c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 876 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLTLTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|59711735|ref|YP_204511.1| hypothetical protein VF_1128 [Vibrio fischeri ES114] gi|59479836|gb|AAW85623.1| hypothetical protein VF_1128 [Vibrio fischeri ES114] Length = 629 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L +I++ +F+ F ++ I + I+ G+N GKS++ E I Sbjct: 3 IRLSEIQLKNFKSFEDLT-ISPNNRFNIIIGENSAGKSTIFEGI 45 >gi|310830077|ref|YP_003962434.1| putative DNA-directed RNA polymerase [Eubacterium limosum KIST612] gi|308741811|gb|ADO39471.1| putative DNA-directed RNA polymerase [Eubacterium limosum KIST612] Length = 1056 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K + + + HF F E Q I+F L ++ G G GK+++ + + + YG Sbjct: 1 MKPIALYMHHFGPFMEEQ-IDFTKLDKELFLITGPTGSGKTTIFDGLCYALYGEGSNTFR 59 Query: 84 GDSIKKRSIKTPMPM 98 K P+ M Sbjct: 60 QSREMKSQFGDPLEM 74 >gi|312114635|ref|YP_004012231.1| exonuclease protein [Rhodomicrobium vannielii ATCC 17100] gi|311219764|gb|ADP71132.1| exonuclease protein [Rhodomicrobium vannielii ATCC 17100] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I F F ++F L + G G GKSS+ A+ + +G + K ++ Sbjct: 6 LVIQAFGPFAGRHVVDFRHALDCGLFGIYGSTGSGKSSIFNAMTFALFGEAVKEKVDNAS 65 Query: 88 KKRSIKTP 95 + P Sbjct: 66 LRSHHAAP 73 >gi|242240333|ref|YP_002988514.1| SMC domain protein [Dickeya dadantii Ech703] gi|242132390|gb|ACS86692.1| SMC domain protein [Dickeya dadantii Ech703] Length = 1227 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+FA + L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFARAPFVNNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|197250476|ref|YP_002147569.1| hypothetical protein SeAg_B2778 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214179|gb|ACH51576.1| hypothetical protein SeAg_B2778 [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 490 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I + + RGF + + +EF +T + G NG GKS++ A+ Sbjct: 23 YVKRITLKNVRGF-DEEIVEFKTPVTALIGTNGGGKSTILGAV 64 >gi|159045915|ref|YP_001534709.1| recombination protein F [Dinoroseobacter shibae DFL 12] gi|157913675|gb|ABV95108.1| DNA replication and repair protein RecF [Dinoroseobacter shibae DFL 12] Length = 361 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +SHFR T + + + +++G NG GK+++ EA+ +L G RR ++ Sbjct: 4 VAVTSLSLSHFRSHTHLT-LSLDERPVVLHGPNGIGKTNVLEALSFLSPGRGLRRAKTEA 62 Query: 87 I 87 + Sbjct: 63 V 63 >gi|145219938|ref|YP_001130647.1| SMC domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206102|gb|ABP37145.1| SMC domain protein [Chlorobium phaeovibrioides DSM 265] Length = 1088 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L++ + I+FAD + + G G GKS++ +AI YG T R Sbjct: 1 MKILELRFKNLNSLYGEWLIDFADPEYVSNGIFALTGPTGAGKSTILDAICLALYGATPR 60 >gi|300813341|ref|ZP_07093692.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512484|gb|EFK39633.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 655 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++IS++ F + EF L ++ G NG GK++ +++ G ++ Sbjct: 11 LKRVKISNYSLFRKDIDYEFILGLNLIIGGNGIGKTTFINIVKYALIGLYKKDL 64 >gi|228921059|ref|ZP_04084394.1| Exonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838605|gb|EEM83911.1| Exonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|45190650|ref|NP_984904.1| AER044Wp [Ashbya gossypii ATCC 10895] gi|44983629|gb|AAS52728.1| AER044Wp [Ashbya gossypii ATCC 10895] Length = 1103 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + +F E ++EF L + G NG GKS++ AI +F G S+ Sbjct: 61 YMKRITLKNFMCH-EHFELEFGPRLNFIVGSNGSGKSAILTAITVVFGAKASDTNRGVSL 119 Query: 88 K 88 K Sbjct: 120 K 120 >gi|21673973|ref|NP_662038.1| exonuclease SbcC [Chlorobium tepidum TLS] gi|21647117|gb|AAM72380.1| exonuclease SbcC [Chlorobium tepidum TLS] Length = 1222 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 29 LLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + ++ +I+F +D L + G G GKS++ +AI YG T R Sbjct: 3 IQKLRFANLNSLQGEWEIDFTRPEYLSDGLFAITGPTGSGKSTILDAICLGLYGQTPRLG 62 Query: 83 H 83 Sbjct: 63 R 63 >gi|261822546|ref|YP_003260652.1| exonuclease SbcC [Pectobacterium wasabiae WPP163] gi|261606559|gb|ACX89045.1| exonuclease SbcC [Pectobacterium wasabiae WPP163] Length = 1227 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTKEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|253687401|ref|YP_003016591.1| SMC domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753979|gb|ACT12055.1| SMC domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 1227 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|227327487|ref|ZP_03831511.1| exonuclease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 466 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|227113359|ref|ZP_03827015.1| exonuclease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1227 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|157144342|ref|YP_001451661.1| recombination protein F [Citrobacter koseri ATCC BAA-895] gi|166220702|sp|A8ACL2|RECF_CITK8 RecName: Full=DNA replication and repair protein recF gi|157081547|gb|ABV11225.1| hypothetical protein CKO_00046 [Citrobacter koseri ATCC BAA-895] Length = 357 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|110632905|ref|YP_673113.1| ATP-dependent OLD family endonuclease [Mesorhizobium sp. BNC1] gi|110283889|gb|ABG61948.1| ATP-dependent endonuclease of the OLD family-like protein [Chelativorans sp. BNC1] Length = 615 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I++FRG I+F+ T++ G N GKS++ EA++ + Sbjct: 1 MRVRRLKITNFRG-VSQGCIDFS-GHTLLVGGNNVGKSTVCEALDLVLG 47 >gi|332994810|gb|AEF04865.1| ATP-dependent endonuclease of the OLD family-like protein [Alteromonas sp. SN2] Length = 549 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL I IS+F+G ++ I D++ ++ G N KS++ +A E Sbjct: 1 MKLSAILISNFKGISDEITI-LIDNIVVLVGPNNSCKSTILDAYE 44 >gi|329735890|gb|EGG72169.1| hypothetical protein SEVCU028_0562 [Staphylococcus epidermidis VCU028] Length = 190 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L I + +F F + I+F D L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPLHIVMENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKT 59 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQLK 110 + ++ PM + YQ K Sbjct: 60 RKEGDLRSHFADGKSPMSVI-----YQFK 83 >gi|310766799|gb|ADP11749.1| ATP-dependent dsDNA exonuclease [Erwinia sp. Ejp617] Length = 1119 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 11/78 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 Query: 81 -----RKHGDSIKKRSIK 93 D + + S + Sbjct: 61 LGGITSTQNDLMTRDSAE 78 >gi|254784276|ref|YP_003071704.1| DNA replication and repair protein RecF [Teredinibacter turnerae T7901] gi|259563674|sp|C5BKM1|RECF_TERTT RecName: Full=DNA replication and repair protein recF gi|237686556|gb|ACR13820.1| DNA replication and repair protein RecF [Teredinibacter turnerae T7901] Length = 378 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++IS FR ++ + + +++G+NG GK+S+ E+I L +G + R Sbjct: 4 LRRLDISEFRNLRSAT-LQPGEGINLISGENGSGKTSILESISVLAHGRSFR 54 >gi|259909299|ref|YP_002649655.1| ATP-dependent dsDNA exonuclease [Erwinia pyrifoliae Ep1/96] gi|224964921|emb|CAX56444.1| ATP-dependent dsDNA exonuclease [Erwinia pyrifoliae Ep1/96] gi|283479354|emb|CAY75270.1| Nuclease sbcCD subunit C [Erwinia pyrifoliae DSM 12163] Length = 1119 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 11/78 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 Query: 81 -----RKHGDSIKKRSIK 93 D + + S + Sbjct: 61 LGGITSTQNDLMTRDSAE 78 >gi|19075406|ref|NP_587906.1| Smc5-6 complex SMC subunit Smc6 [Schizosaccharomyces pombe 972h-] gi|1709997|sp|P53692|SMC6_SCHPO RecName: Full=Structural maintenance of chromosomes protein 6; AltName: Full=DNA repair protein rad18 gi|1150622|emb|CAA56900.1| rad18 [Schizosaccharomyces pombe] gi|3859084|emb|CAA21961.1| Smc5-6 complex SMC subunit Smc6 [Schizosaccharomyces pombe] Length = 1140 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + KI F + V G NG GKS++ + ++K Sbjct: 97 IECIHLVNFMCH-DSLKINFGPRINFVIGHNGSGKSAILTGLTICLGAKASNTNRAPNMK 155 >gi|120553499|ref|YP_957850.1| hypothetical protein Maqu_0562 [Marinobacter aquaeolei VT8] gi|120323348|gb|ABM17663.1| conserved hypothetical protein [Marinobacter aquaeolei VT8] Length = 370 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Query: 27 FKLLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL +I + F+ + + ++I F D +T++ G NG GKS+L G+ Sbjct: 1 MKLKEISVKGFKSISNHDYERIAFND-VTVLLGANGSGKSNLISLFR--LLGFMTTGALQ 57 Query: 85 DSIKKRSIKT 94 + ++ + Sbjct: 58 QYVGRQGVSQ 67 >gi|329121777|ref|ZP_08250393.1| exonuclease SbcC subfamily [Dialister micraerophilus DSM 19965] gi|327468050|gb|EGF13538.1| exonuclease SbcC subfamily [Dialister micraerophilus DSM 19965] Length = 876 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 9/78 (11%) Query: 34 ISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + F +++ Q+++F L ++ GQ G GK+++ +A+ + YG T + Sbjct: 1 MCAFGPYSDEQELDFTLLGNQKLFLICGQTGAGKTTILDAMCYALYGKTGGGLRNGETMR 60 Query: 90 RSI-----KTPMPMCMAV 102 S +T + A+ Sbjct: 61 SSYADLDTETKVEFDFAI 78 >gi|311742166|ref|ZP_07715976.1| recombination protein F [Aeromicrobium marinum DSM 15272] gi|311314659|gb|EFQ84566.1| recombination protein F [Aeromicrobium marinum DSM 15272] Length = 373 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR +TE+ +E + G NG GK++L EA+++L + R Sbjct: 1 MHVARLALHDFRSYTELD-LELSAGPVAFVGANGQGKTNLVEAVDYLARLDSHRVAADAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LVRAGAE 66 >gi|300708338|ref|XP_002996350.1| hypothetical protein NCER_100567 [Nosema ceranae BRL01] gi|239605645|gb|EEQ82679.1| hypothetical protein NCER_100567 [Nosema ceranae BRL01] Length = 975 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +Y+ +I KL E+ +F + I+F T + G+NG GKS++ ++ LF Sbjct: 3 LENYHESTVILKL---ELINFMCH-DHIVIDFKKPFTCIGGRNGSGKSAIMISLGILFGQ 58 Query: 77 YTQRRKHGDSIKKRSIKTPMPMCM 100 + + G+S + IKT C+ Sbjct: 59 RSSNLERGNSFRNL-IKTGQQFCV 81 >gi|228914952|ref|ZP_04078557.1| Exonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844748|gb|EEM89794.1| Exonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|227537679|ref|ZP_03967728.1| SMC domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242293|gb|EEI92308.1| SMC domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 656 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I++ +++G I+ EF L I+ G+NG GKS++ +AI Sbjct: 15 MYLAYIKVENYKGIEAIET-EFDPKLNIIIGENGCGKSAIIDAIR 58 >gi|224476475|ref|YP_002634081.1| putative DNA repair ATPase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421082|emb|CAL27896.1| putative ATPase involved in DNA repair [Staphylococcus carnosus subsp. carnosus TM300] Length = 1011 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L++ + + F E I+F + L +++G+ G GKS L +AI + YG Sbjct: 1 MKPLNLHLQNVGPFMEET-IDFTQLKNNELFLISGKTGSGKSMLFDAIVFALYGKASTSS 59 Query: 83 HGDSIKKRSI---KTPMPMCMAVPRCKYQLK 110 ++ + K+PM + + +QLK Sbjct: 60 RKETALRSHFADGKSPMEVELV-----FQLK 85 >gi|170108569|ref|XP_001885493.1| predicted protein [Laccaria bicolor S238N-H82] gi|164639655|gb|EDR03925.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1183 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F + F + + G NG GKS+ A+ G G+ IK Sbjct: 137 IEYIEMHQFMCHKYLT-FHFGPQINFIIGHNGSGKSAALSALTVALGGKANSTGRGNGIK 195 >gi|15895993|ref|NP_349342.1| ATPase involved in DNA repair [Clostridium acetobutylicum ATCC 824] gi|21362931|sp|Q97FK1|SBCC_CLOAB RecName: Full=Nuclease sbcCD subunit C gi|15025772|gb|AAK80682.1|AE007771_2 ATPase involved in DNA repair [Clostridium acetobutylicum ATCC 824] gi|325510146|gb|ADZ21782.1| ATPase [Clostridium acetobutylicum EA 2018] Length = 1163 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + + I F Q+I F L + G G GK+++ ++I YG R+ Sbjct: 1 MKPIRVRIKGLNSFENEQEINFEKLTKRGLFGIFGPTGSGKTTILDSITLSLYGEVARK 59 >gi|228985448|ref|ZP_04145605.1| Exonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774213|gb|EEM22622.1| Exonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFNDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|118595067|ref|ZP_01552414.1| hypothetical protein MB2181_05325 [Methylophilales bacterium HTCC2181] gi|118440845|gb|EAV47472.1| hypothetical protein MB2181_05325 [Methylophilales bacterium HTCC2181] Length = 655 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Query: 29 LLDIEISHFRGF-TEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I+ +F F + +I F+ +T+V+GQN GK+S+ AI+W YG + + Sbjct: 3 LKSIKFRNFMPFLGDESEINFSTDQSKKVTLVDGQNTNGKTSIGRAIQWCLYGNIKNKG 61 >gi|325971081|ref|YP_004247272.1| DNA repair protein RecN [Spirochaeta sp. Buddy] gi|324026319|gb|ADY13078.1| DNA repair protein RecN [Spirochaeta sp. Buddy] Length = 557 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L +EI H+ E IEF+D +++ G+ G GKS + A+ L T+ Sbjct: 2 LERLEIHHY-ALIEDSTIEFSDGFSVITGETGAGKSIILGALSLLLGEKTE 51 >gi|315651997|ref|ZP_07904999.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315485826|gb|EFU76206.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 622 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + I+ F F + F D++ IV G N GKS++ I+ + YG + + Sbjct: 1 MRLLSLHINGFGKFKNKDLV-FGDNMNIVYGYNEAGKSTIFMFIKAMLYGLERAKGRASK 59 >gi|304405886|ref|ZP_07387544.1| DNA replication and repair protein RecF [Paenibacillus curdlanolyticus YK9] gi|304345129|gb|EFM10965.1| DNA replication and repair protein RecF [Paenibacillus curdlanolyticus YK9] Length = 367 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + ++R + E++ ++ + + G N GK++L E+I L + R Sbjct: 1 MFLKRIALRNYRNYAELE-LDTNSKVNLFIGPNAQGKTNLLESIFALALTKSHRTAKDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|228933650|ref|ZP_04096500.1| Exonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826110|gb|EEM71893.1| Exonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229091338|ref|ZP_04222553.1| Exonuclease [Bacillus cereus Rock3-42] gi|228691967|gb|EEL45709.1| Exonuclease [Bacillus cereus Rock3-42] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|229184572|ref|ZP_04311774.1| Exonuclease [Bacillus cereus BGSC 6E1] gi|228598889|gb|EEK56507.1| Exonuclease [Bacillus cereus BGSC 6E1] Length = 1022 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|195400036|ref|XP_002058624.1| GJ14526 [Drosophila virilis] gi|194142184|gb|EDW58592.1| GJ14526 [Drosophila virilis] Length = 1105 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 S LT+ + K++ I + +F + I F H+ + G NG GKS++ A+ Sbjct: 67 SHGLTARNVFQRCGKIISIRLRNFMCHS-NLYINFGPHINFLVGSNGSGKSAVITALALG 125 Query: 74 FYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 G + SI+K + + C L+ Sbjct: 126 LAGSARNTSRASSIQKLIKNGETNASIELTLCNTGLR 162 >gi|126736849|ref|ZP_01752584.1| exonuclease SbcC, putative [Roseobacter sp. SK209-2-6] gi|126721434|gb|EBA18137.1| exonuclease SbcC, putative [Roseobacter sp. SK209-2-6] Length = 1024 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + + F + I+F D L + GQ G GKS+L A+ + +G + Sbjct: 1 MRPVQLTLQAFGPYPNHTVIDFRDAVSTGLFGIYGQTGSGKSTLFSAMTFALFGVPAK 58 >gi|322707989|gb|EFY99566.1| DNA repair protein Rad18, putative [Metarhizium anisopliae ARSEF 23] Length = 1161 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 149 IESITCYNFMCH-ERLHVELGPLINFIVGENGSGKSAVLTALTLCLGGKASDTNRGGSLK 207 >gi|300742654|ref|ZP_07072675.1| RecF protein [Rothia dentocariosa M567] gi|300381839|gb|EFJ78401.1| RecF protein [Rothia dentocariosa M567] Length = 403 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +R + + + + +T+ G NG GK+++ EAI++ + R H Sbjct: 1 MYLDHLSLLDYRTYP-LLNLPLSAGVTVFLGPNGVGKTNIIEAIDYTANLSSHRVSHDGP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRVG 64 >gi|311112569|ref|YP_003983791.1| recombination protein F [Rothia dentocariosa ATCC 17931] gi|310944063|gb|ADP40357.1| recombination protein F [Rothia dentocariosa ATCC 17931] Length = 403 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + +R + + + + +T+ G NG GK+++ EAI++ + R H Sbjct: 1 MYLDHLSLLDYRTYP-LLNLPLSAGVTVFLGPNGVGKTNIIEAIDYTANLSSHRVSHDGP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LVRVG 64 >gi|282881774|ref|ZP_06290432.1| DNA replication and repair protein RecF [Peptoniphilus lacrimalis 315-B] gi|281298384|gb|EFA90822.1| DNA replication and repair protein RecF [Peptoniphilus lacrimalis 315-B] Length = 358 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + +FR + + K+ ++ I+ G+N GK++L EAI Y+ + + Sbjct: 1 MNLSFIGLYNFRNYKSL-KLNTGPNINIIYGKNASGKTNLLEAIYMTCKAYSFKNPRDND 59 Query: 87 IKKRS 91 + S Sbjct: 60 LINFS 64 >gi|228945966|ref|ZP_04108308.1| Exonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813714|gb|EEM59993.1| Exonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|228927418|ref|ZP_04090475.1| Exonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121909|ref|ZP_04251128.1| Exonuclease [Bacillus cereus 95/8201] gi|228661558|gb|EEL17179.1| Exonuclease [Bacillus cereus 95/8201] gi|228832314|gb|EEM77894.1| Exonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|157962905|ref|YP_001502939.1| ATP-dependent OLD family endonuclease [Shewanella pealeana ATCC 700345] gi|157847905|gb|ABV88404.1| ATP-dependent endonuclease of the OLD family [Shewanella pealeana ATCC 700345] Length = 605 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +EI +FRG TE I+ ++ T + G N GKS++ A+ + + Sbjct: 1 MKINKVEIENFRGITEAV-IDL-NNFTTLVGPNNIGKSTILAALNLVLDNKKPK 52 >gi|119945049|ref|YP_942729.1| SMC domain-containing protein [Psychromonas ingrahamii 37] gi|119863653|gb|ABM03130.1| SMC domain protein [Psychromonas ingrahamii 37] Length = 1234 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + KI+F D L ++ GQ G GKS++ +AI Y T R Sbjct: 1 MKILSIRFKNLNSLKGHWKIDFQDADFLENGLFVITGQTGAGKSTILDAICLALYQQTPR 60 >gi|42521081|ref|NP_966996.1| recombination protein F [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410822|gb|AAS14930.1| recF protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 365 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR + + ++ D ++ G+NG GK+++ EAI L ++ I Sbjct: 6 YIKKLKLHNFRSHSNFE-LDSDDSSVVITGKNGIGKTNILEAISLLAKSNGMKKAKASEI 64 Query: 88 KKR 90 + R Sbjct: 65 QNR 67 >gi|332305289|ref|YP_004433140.1| SMC domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172618|gb|AEE21872.1| SMC domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1228 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L ++ S+ KI+F + + + G G GK++L +AI Y T R Sbjct: 1 MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|254411669|ref|ZP_05025445.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196181391|gb|EDX76379.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 353 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ IE+ +F+ F + +F D + ++ G NG GK+SL +AI T Sbjct: 1 MKVQSIELKYFKKFRDST-FDFTDSETGLARDIIVLIGMNGTGKTSLLQAIAATLGVATG 59 Query: 80 R 80 R Sbjct: 60 R 60 >gi|195036424|ref|XP_001989670.1| GH18920 [Drosophila grimshawi] gi|193893866|gb|EDV92732.1| GH18920 [Drosophila grimshawi] Length = 1103 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL+ I + +F + IEF ++ + G NG GKS++ A+ G + SI Sbjct: 79 KLMSIRLKNFMCHS-NLFIEFGPNINFLVGSNGSGKSAVITALALGLAGSARNTSRASSI 137 Query: 88 K 88 + Sbjct: 138 R 138 >gi|218441950|ref|YP_002380279.1| ATPase AAA [Cyanothece sp. PCC 7424] gi|218174678|gb|ACK73411.1| AAA ATPase [Cyanothece sp. PCC 7424] Length = 518 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 23/46 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I ++ + + + + HLT + G NG GKS++ A+ Sbjct: 19 KVNSIYFNNLKNLRDFEIYFYNKHLTAIMGPNGCGKSTIIHALACC 64 >gi|168185673|ref|ZP_02620308.1| ATPase involved in DNA repair [Clostridium botulinum C str. Eklund] gi|169296473|gb|EDS78606.1| ATPase involved in DNA repair [Clostridium botulinum C str. Eklund] Length = 1176 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K ++I F Q I F L + G G GKS++ +AI YG R Sbjct: 1 MKPRVLKIRGLNSFEREQIINFNMLTEKGLFGIFGPTGSGKSTILDAITIALYGKITRTN 60 Query: 83 HG 84 G Sbjct: 61 KG 62 >gi|109899748|ref|YP_663003.1| SMC protein-like [Pseudoalteromonas atlantica T6c] gi|109702029|gb|ABG41949.1| SMC protein-like protein [Pseudoalteromonas atlantica T6c] Length = 1232 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L ++ S+ KI+F + + + G G GK++L +AI Y T R Sbjct: 1 MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|330506917|ref|YP_004383345.1| hypothetical protein MCON_0715 [Methanosaeta concilii GP-6] gi|328927725|gb|AEB67527.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 613 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I + +FR E + + L ++ G+N GK++L +A+ Sbjct: 1 MYLSKISVHNFRNL-ESLEANLSPGLNVIVGENNVGKTNLLDALRVALG 48 >gi|323694243|ref|ZP_08108419.1| hypothetical protein HMPREF9475_03283 [Clostridium symbiosum WAL-14673] gi|323501716|gb|EGB17602.1| hypothetical protein HMPREF9475_03283 [Clostridium symbiosum WAL-14673] Length = 624 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + LD+ IS F F + F D + IV G+N GKS++ I + +G ++R Sbjct: 1 MRFLDLYISGFGKFH-NTSVSFEDGINIVYGKNEAGKSTIHTFIRGMLFGIERQRGR 56 >gi|323487318|ref|ZP_08092618.1| hypothetical protein HMPREF9474_04369 [Clostridium symbiosum WAL-14163] gi|323399363|gb|EGA91761.1| hypothetical protein HMPREF9474_04369 [Clostridium symbiosum WAL-14163] Length = 624 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + LD+ IS F F + F D + IV G+N GKS++ I + +G ++R Sbjct: 1 MRFLDLYISGFGKFH-NTSVSFEDGINIVYGKNEAGKSTIHTFIRGMLFGIERQRGR 56 >gi|307545776|ref|YP_003898255.1| SMC domain protein [Halomonas elongata DSM 2581] gi|307217800|emb|CBV43070.1| SMC domain protein [Halomonas elongata DSM 2581] Length = 1104 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + +++ +++FA L + G G GKS+L +A+ YG T Sbjct: 1 MKILALRLANLASLPGPLELDFATEPLASAGLFAITGPTGAGKSTLLDALCLALYGNTP- 59 Query: 81 RKHGDSIKKRSIKTP 95 R + + P Sbjct: 60 RLRQAPNRDSQVDDP 74 >gi|304391080|ref|ZP_07373032.1| possible nuclease [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325963|gb|EFL93209.1| possible nuclease [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 1058 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K + + F E ++ L ++ G+ G GKS++ + I + YG Sbjct: 1 MKFHRLTLDGVGSFYERTTLDLDTLAESGLFLITGKTGSGKSTILDGIVYALYGDVA 57 >gi|291527523|emb|CBK93109.1| Predicted ATP-binding protein involved in virulence [Eubacterium rectale M104/1] Length = 430 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL I + +F+G + +I+ + T++ G NG GKS++ +AI+ L Y + G Sbjct: 1 MKLNSIILQNFKGI-DNLEIKLDNKTTVIFGVNGVGKSTILQAID-LLYADIIAKLMG 56 >gi|254258895|ref|ZP_04949949.1| hypothetical protein BURPS1710A_1431 [Burkholderia pseudomallei 1710a] gi|254217584|gb|EET06968.1| hypothetical protein BURPS1710A_1431 [Burkholderia pseudomallei 1710a] Length = 347 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL ++I ++ Q + F D T + G N GKS++ +AIEWL Sbjct: 1 MKLHSLKIDGYKRIQSAQLL-FGDA-TFLIGPNNAGKSTVLKAIEWLL 46 >gi|228958613|ref|ZP_04120331.1| Exonuclease [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801034|gb|EEM47933.1| Exonuclease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|297565754|ref|YP_003684726.1| DNA repair protein RecN [Meiothermus silvanus DSM 9946] gi|296850203|gb|ADH63218.1| DNA repair protein RecN [Meiothermus silvanus DSM 9946] Length = 529 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +E+ + E +EF LT++ G+ G GKS L +A+ L + Sbjct: 2 LERLEVKNL-AVLEEVTLEFGPGLTVLTGETGAGKSVLVDALSLLLGERAEGMIR 55 >gi|218263846|ref|ZP_03477815.1| hypothetical protein PRABACTJOHN_03505 [Parabacteroides johnsonii DSM 18315] gi|218222445|gb|EEC95095.1| hypothetical protein PRABACTJOHN_03505 [Parabacteroides johnsonii DSM 18315] Length = 239 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ I I +FR + +I+F TI G N GK+S AI W Sbjct: 1 MRIDHIHIRNFRKL-KNCRIDFNKDQTIFVGANNSGKTSAMSAIIWFL 47 >gi|254478558|ref|ZP_05091932.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM 12653] gi|214035487|gb|EEB76187.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM 12653] Length = 189 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRK- 82 KL + I +FR ++ EF + +L ++ G N GKS++ AI + + R Sbjct: 1 MKLKRVVIKNFRSIKHLE-FEFPESNLLVLVGPNNSGKSNIIRAINLICGEDWVSSERLQ 59 Query: 83 -HGDSIKKRSIKTPMPM 98 + ++ +S + + + Sbjct: 60 DYDFYLRDKSKEIRIEL 76 >gi|71734275|ref|YP_273411.1| hypothetical protein PSPPH_1143 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554828|gb|AAZ34039.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 213 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 26 IFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + +S FR F ++ + +T + G N GK++L A+ LF +R Sbjct: 3 LVRIESVSLSGFRCFGPNPITVDVSAEITTIVGPNAAGKTALLHAMLKLFGVTRAQR 59 >gi|326803150|ref|YP_004320968.1| RecF/RecN/SMC N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651123|gb|AEA01306.1| RecF/RecN/SMC N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 921 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I+I + F Q + D + G NG GKS+L + + +G+ +R+ G Sbjct: 1 MKLQAIDIFGYGKFVHRQ-FQLTDDFNVFLGPNGSGKSTLMSFVLSIMFGFPNQRRKGS 58 >gi|300115058|ref|YP_003761633.1| SMC domain-containing protein [Nitrosococcus watsonii C-113] gi|299540995|gb|ADJ29312.1| SMC domain protein [Nitrosococcus watsonii C-113] Length = 1091 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+ +D + + G G GKS+L +AI YG T R Sbjct: 1 MRILQVRFKNLNSLVGEWQIDLTHPAFASDGIFAITGPTGAGKSTLLDAICLALYGRTPR 60 >gi|261250637|ref|ZP_05943212.1| DNA recombination and repair protein RecF [Vibrio orientalis CIP 102891] gi|260939206|gb|EEX95193.1| DNA recombination and repair protein RecF [Vibrio orientalis CIP 102891] Length = 360 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR E I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIKQFRNI-EACDINLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|317049194|ref|YP_004116842.1| DNA repair protein RecN [Pantoea sp. At-9b] gi|316950811|gb|ADU70286.1| DNA repair protein RecN [Pantoea sp. At-9b] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|326204495|ref|ZP_08194352.1| SMC domain protein [Clostridium papyrosolvens DSM 2782] gi|325985288|gb|EGD46127.1| SMC domain protein [Clostridium papyrosolvens DSM 2782] Length = 241 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIE----WLFYGYTQRRKHGDSIKKRSIKT 94 + I F ++T G+NG GKS+L EAI + G ++ D + S+ + Sbjct: 31 KSIYFKSNVTFFVGENGSGKSTLLEAIAQNCGFCVKGGSRNSLLTDDVDDLSLSS 85 >gi|160331781|ref|XP_001712597.1| smc1 [Hemiselmis andersenii] gi|159766046|gb|ABW98272.1| smc1 [Hemiselmis andersenii] Length = 1126 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +EI +F+ F I + G+NG GK++ S+AI + G + Sbjct: 8 LKLVEIENFKSFKNIVSFGPFSFFSSFIGKNGSGKTNFSDAISFCLGGNLEE 59 >gi|126734080|ref|ZP_01749827.1| DNA replication and repair protein RecF, putative [Roseobacter sp. CCS2] gi|126716946|gb|EBA13810.1| DNA replication and repair protein RecF, putative [Roseobacter sp. CCS2] Length = 366 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ +SHFR + I + G NG GK+++ EA L G RR D + Sbjct: 6 LTELTLSHFRSH-KRAAITLDARPLAIFGPNGAGKTNVLEAASLLSPGRGLRRAGADDLT 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|52840259|ref|YP_094058.1| DNA recombination and repair protein ATPase RecF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627370|gb|AAU26111.1| DNA recombination and repair protein ATPase RecF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 353 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +FR I + + G NG GK+SL EA+ L ++ R Sbjct: 3 LSEVRIHNFRNIASTSLI-LNPNFNCITGPNGGGKTSLLEALYMLSCAHSFRS 54 >gi|83773137|dbj|BAE63264.1| unnamed protein product [Aspergillus oryzae] Length = 1169 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E +F + +E + + G+NG GKS++ AI G G S+K Sbjct: 103 LERVECYNFMCH-DHFYVELGPLINFIVGKNGSGKSAVLTAITLCLGGKASATNRGQSLK 161 >gi|85712932|ref|ZP_01043972.1| ATPase involved in DNA repair, RecN [Idiomarina baltica OS145] gi|85693238|gb|EAQ31196.1| ATPase involved in DNA repair, RecN [Idiomarina baltica OS145] Length = 554 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++ I +F + IEF + +T + G+ G GKS +A+ G Sbjct: 2 LTELHIRNF-AIVKQLDIEFKNGMTAITGETGAGKSIALDALGLCLGGRADAN 53 >gi|163814523|ref|ZP_02205912.1| hypothetical protein COPEUT_00674 [Coprococcus eutactus ATCC 27759] gi|158450158|gb|EDP27153.1| hypothetical protein COPEUT_00674 [Coprococcus eutactus ATCC 27759] Length = 923 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L++ +S F + +Q+++ A+ L +V G G GK+++ +AI + Y Sbjct: 1 MRPLNLTMSAFGPYAGVQELDMTQLGAEGLYLVTGDTGAGKTTIFDAICYALYDEPSGAG 60 Query: 83 HGDSIKKRSI 92 + + + Sbjct: 61 RDARMMRSTY 70 >gi|332291116|ref|YP_004429725.1| DNA replication and repair protein RecF [Krokinobacter diaphorus 4H-3-7-5] gi|332169202|gb|AEE18457.1| DNA replication and repair protein RecF [Krokinobacter diaphorus 4H-3-7-5] Length = 363 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E + F + G NG GK+++ +AI L +G + Sbjct: 3 LKSLSLINYKNF-ESKDFTFDAKINCFVGNNGVGKTNILDAIYHLSFGKS 51 >gi|322701867|gb|EFY93615.1| DNA repair protein Rad18, putative [Metarhizium acridum CQMa 102] Length = 1171 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 135 IESITCYNFMCH-ERLHVELGPLINFIVGENGSGKSAVLTALTLCLGGKASDTNRGGSLK 193 >gi|297570922|ref|YP_003696696.1| SMC domain protein [Arcanobacterium haemolyticum DSM 20595] gi|296931269|gb|ADH92077.1| SMC domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 1019 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +EI F I+ L ++ G G GKSSL +AI + YG T + Sbjct: 1 MLFRRLEIDSVGPFAGHHVIDLDSLTAGGLFLLEGPTGSGKSSLIDAIVFALYGETAGAE 60 Query: 83 HGDSIKKRSIKTP 95 S + + P Sbjct: 61 SDYSRIRSTYADP 73 >gi|238922221|ref|YP_002935735.1| hypothetical protein EUBELI_20456 [Eubacterium eligens ATCC 27750] gi|238873893|gb|ACR73601.1| Hypothetical protein EUBELI_20456 [Eubacterium eligens ATCC 27750] Length = 477 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Query: 26 IFKLLDIEISHFRGFT------EIQKIEFADHLTIVNGQNGYGKSSLSEAI---EWLFYG 76 I ++ I I +F+ T E ++ ++ + + GQNG GK++L +AI + G Sbjct: 16 IVRIESITIDNFKNVTHGTLDFENKRKDYKASVLGLYGQNGSGKTALIDAIHLLKLALCG 75 Query: 77 YTQRRKHGDSI 87 +K+ D I Sbjct: 76 KAVPKKYADYI 86 >gi|94985720|ref|YP_605084.1| DNA replication and repair protein RecF [Deinococcus geothermalis DSM 11300] gi|123257076|sp|Q1IXW9|RECF_DEIGD RecName: Full=DNA replication and repair protein recF gi|94556001|gb|ABF45915.1| DNA replication and repair protein RecF [Deinococcus geothermalis DSM 11300] Length = 358 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + ++R + F +T V G+NG GK++L EA G T Sbjct: 4 VQLSSLSTLNYRNLA-PGTLHFPAGVTGVFGENGAGKTNLLEAAYLALTGLT 54 >gi|23465220|ref|NP_695823.1| recombination protein RecF [Bifidobacterium longum NCC2705] gi|189440296|ref|YP_001955377.1| recombinational DNA repair ATPase [Bifidobacterium longum DJO10A] gi|322690196|ref|YP_004219766.1| recombination protein RecF [Bifidobacterium longum subsp. longum JCM 1217] gi|23325848|gb|AAN24459.1| recombination protein RecF [Bifidobacterium longum NCC2705] gi|189428731|gb|ACD98879.1| Recombinational DNA repair ATPase [Bifidobacterium longum DJO10A] gi|320455052|dbj|BAJ65674.1| recombination protein RecF [Bifidobacterium longum subsp. longum JCM 1217] Length = 395 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 ++F + I+ G+NG GK++L EA+E L G + R + +R T Sbjct: 2 VDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLPLIERGQTT 50 >gi|58696694|ref|ZP_00372244.1| recF protein [Wolbachia endosymbiont of Drosophila simulans] gi|58698389|ref|ZP_00373302.1| recF protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630989|ref|YP_002727780.1| recombination protein F [Wolbachia sp. wRi] gi|58535102|gb|EAL59188.1| recF protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58537136|gb|EAL60246.1| recF protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592970|gb|ACN95989.1| recombination protein F [Wolbachia sp. wRi] Length = 365 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR + + ++ D ++ G+NG GK+++ EAI L ++ I Sbjct: 6 YIKKLKLHNFRSHSNFE-LDSDDSSVVITGKNGIGKTNILEAISLLAKSNGMKKAKASEI 64 Query: 88 KKR 90 + R Sbjct: 65 QNR 67 >gi|332343180|gb|AEE56514.1| hypothetical protein UMNK88_1917 [Escherichia coli UMNK88] Length = 578 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ +EI +FR + + + L + G GK+++ +AI+ Sbjct: 1 MVRVCKVEIQNFRSIRLLT-WQPSPGLNCLIGPGDSGKTTILDAIDLCLGARRNVSFSDT 59 Query: 86 SIKKRSIKTPMPMCMAV 102 + P+ + + + Sbjct: 60 DFFGLDVTQPISITLTL 76 >gi|328771443|gb|EGF81483.1| hypothetical protein BATDEDRAFT_34779 [Batrachochytrium dendrobatidis JAM81] Length = 1127 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ +F + +Q + + + G NG GKS++ A+ G G+++K Sbjct: 83 IERVELVNFMCHSYLQ-VSLGSKINFIVGHNGSGKSAILTALTVCLGGKAGFTNRGNNLK 141 >gi|264680295|ref|YP_003280205.1| SMC protein-like protein [Comamonas testosteroni CNB-2] gi|262210811|gb|ACY34909.1| SMC protein-like protein [Comamonas testosteroni CNB-2] Length = 1143 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 10/92 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + I+F + L + G G GKS+L +AI Y T R Sbjct: 1 MRILKLRLKNLNSLKGEWNIDFTAAPFADNGLFAITGSTGAGKSTLLDAICLALYHQTPR 60 Query: 81 ----RKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 D + + + + + V Y+ Sbjct: 61 LDSISGSNDIMTRHTGECEAEVEFEVKGVAYR 92 >gi|229017666|ref|ZP_04174557.1| Exonuclease [Bacillus cereus AH1273] gi|229023884|ref|ZP_04180367.1| Exonuclease [Bacillus cereus AH1272] gi|228737397|gb|EEL87909.1| Exonuclease [Bacillus cereus AH1272] gi|228743592|gb|EEL93701.1| Exonuclease [Bacillus cereus AH1273] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFNDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|303273074|ref|XP_003055898.1| Rad50 DNA repair/recombination protein [Micromonas pusilla CCMP1545] gi|226461982|gb|EEH59274.1| Rad50 DNA repair/recombination protein [Micromonas pusilla CCMP1545] Length = 1542 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F+ I F LT++ G+NG GK+++ E ++ G Sbjct: 6 KLLIKGIRSFSPENDHAIVFPKPLTLIVGRNGAGKTTVIECLKMATTG 53 >gi|237729531|ref|ZP_04560012.1| recombination and repair protein [Citrobacter sp. 30_2] gi|190341489|gb|ACE74821.1| RecN [Citrobacter sp. OD1158_06] gi|226908137|gb|EEH94055.1| recombination and repair protein [Citrobacter sp. 30_2] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F + +T++ G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFQNGMTVITGETGAGKSIAIDALGLCLGG 48 >gi|190341485|gb|ACE74819.1| RecN [Citrobacter freundii] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F + +T++ G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFQNGMTVITGETGAGKSIAIDALGLCLGG 48 >gi|207092185|ref|ZP_03239972.1| hypothetical protein HpylHP_04145 [Helicobacter pylori HPKX_438_AG0C1] Length = 381 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + +I+ L I+ G N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGGNNVGKSNLLEAL-YCLVGKS 49 >gi|189345561|ref|YP_001942090.1| DNA replication and repair protein RecF [Chlorobium limicola DSM 245] gi|259563358|sp|B3EDN1|RECF_CHLL2 RecName: Full=DNA replication and repair protein recF gi|189339708|gb|ACD89111.1| DNA replication and repair protein RecF [Chlorobium limicola DSM 245] Length = 363 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I++ FR + A+ + ++ G NG GK+S+ E I + Sbjct: 1 MKIEQIQLVQFRNH-KNLSYGPAEGINLLYGPNGSGKTSVLEGIHYC 46 >gi|82595351|ref|XP_725813.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23480956|gb|EAA17378.1| unnamed protein product [Plasmodium yoelii yoelii] Length = 1919 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I I R + + Q++EF+ +TI+ G NG GKS++ E ++ Sbjct: 33 LDKIGIQGIRSYCDEYPQQLEFSSPITIIYGNNGSGKSTIIECLK 77 >gi|327310411|ref|YP_004337308.1| SMC domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326946890|gb|AEA11996.1| SMC domain protein [Thermoproteus uzoniensis 768-20] Length = 799 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++++ I++ F+ + + + + +T + G+ G GKSSL +A+E+ +G Sbjct: 1 MWRIARIKLRDFKVYEGEYEFKLSP-VTAIVGRVGAGKSSLLQAVEFALFG 50 >gi|296115231|ref|ZP_06833872.1| recombination protein F [Gluconacetobacter hansenii ATCC 23769] gi|295978332|gb|EFG85069.1| recombination protein F [Gluconacetobacter hansenii ATCC 23769] Length = 374 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ FR + + +T++ G+NG GK++L E++ L G R + Sbjct: 4 LSRLVLTDFRNYRHLSWTP-TSPVTVIVGENGSGKTNLLESVSLLLPGRGLRGARVADLP 62 Query: 89 KRS 91 + Sbjct: 63 RHG 65 >gi|295694691|ref|YP_003587929.1| DNA replication and repair protein RecF [Bacillus tusciae DSM 2912] gi|295410293|gb|ADG04785.1| DNA replication and repair protein RecF [Bacillus tusciae DSM 2912] Length = 370 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L + + HFR + +Q ++ + + G+NG GK+++ EAI+ L + R Sbjct: 1 MRLESLRLLHFRNYPHLQ-LDTRAPVNVFIGENGQGKTNVLEAIDILALTKSHRTHR 56 >gi|294654799|ref|XP_002770032.1| DEHA2A12606p [Debaryomyces hansenii CBS767] gi|199429158|emb|CAR65408.1| DEHA2A12606p [Debaryomyces hansenii] Length = 1087 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 +L +++ +F ++ + + L ++ G NG GKS+L AI G +RK S Sbjct: 39 ILKVKVKNFTTYS-YAEFNLSPTLNMIIGPNGTGKSTLVAAICLGLGGKIDLIKRKTMKS 97 Query: 87 IKKRSIK 93 + K + Sbjct: 98 MIKTGQE 104 >gi|148264037|ref|YP_001230743.1| SMC domain-containing protein [Geobacter uraniireducens Rf4] gi|146397537|gb|ABQ26170.1| SMC domain protein [Geobacter uraniireducens Rf4] Length = 1227 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + I+F + + + G G GK+++ +AI YG T R Sbjct: 1 MKVLRLSFKNLNSLAGVWDIDFKHPDYVSSGIFAITGPTGAGKTTILDAICLALYGQTPR 60 >gi|329770366|ref|ZP_08261748.1| hypothetical protein HMPREF0433_01512 [Gemella sanguinis M325] gi|328836489|gb|EGF86149.1| hypothetical protein HMPREF0433_01512 [Gemella sanguinis M325] Length = 378 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ +++ +FR + + IE L ++ G N GK+++ E+I L G + R K Sbjct: 1 MKIKTLKLLYFRNYLSLN-IEVHPSLNVLVGDNANGKTNIIESIFCLALGKSYRTKSDS 58 >gi|292622980|ref|XP_001337776.2| PREDICTED: structural maintenance of chromosomes protein 6 [Danio rerio] Length = 948 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + ++F ++ + G NG GKS++ A+ G G S+K Sbjct: 65 IESITLRNFMSHHLLGPLKFGANVNFIVGNNGTGKSAILTALIVGLGGKATTTNRGTSLK 124 >gi|253573851|ref|ZP_04851193.1| DNA replication and repair protein RecF [Paenibacillus sp. oral taxon 786 str. D14] gi|251846328|gb|EES74334.1| DNA replication and repair protein RecF [Paenibacillus sp. oral taxon 786 str. D14] Length = 370 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + ++R + + F + ++ G+N GK++L EA+ L + R Sbjct: 1 MFVNRLSLQNYRNYGTLTLDAFG-AVNLIIGRNAQGKTNLLEALFVLALTKSHRTGKDKE 59 Query: 87 IKKRSIK 93 + Sbjct: 60 LIAFGSD 66 >gi|167841738|ref|ZP_02468422.1| hypothetical protein Bpse38_34002 [Burkholderia thailandensis MSMB43] Length = 588 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ DI +++ G I A + + G NG GKSSL EA+ G T R Sbjct: 1 MKITDIYVANVLGIR-TADIRLAKPVALFTGPNGAGKSSLQEAVRMALTGDTVR 53 >gi|75812881|ref|YP_320498.1| ATPase [Anabaena variabilis ATCC 29413] gi|75705637|gb|ABA25309.1| ATPase [Anabaena variabilis ATCC 29413] Length = 352 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +++ +F+ F +F D T ++ G NG GK+SL +AI T Sbjct: 1 MKIQSLQLKYFKKFRSST-FDFTDPETGLARDIIVLIGMNGAGKTSLLQAIAATLGTATG 59 Query: 80 R 80 R Sbjct: 60 R 60 >gi|84514652|ref|ZP_01002016.1| recombination protein F [Loktanella vestfoldensis SKA53] gi|84511703|gb|EAQ08156.1| recombination protein F [Loktanella vestfoldensis SKA53] Length = 366 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + +SH R + ++ + G NG GK+++ EA+ L G RR D + Sbjct: 6 LLQLTLSHLRSH-KRAVLDLDPRPLAIFGPNGAGKTNILEAVSLLSPGRGLRRAGADDLA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|326793876|ref|YP_004311696.1| DNA repair protein RecN [Marinomonas mediterranea MMB-1] gi|326544640|gb|ADZ89860.1| DNA repair protein RecN [Marinomonas mediterranea MMB-1] Length = 556 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I IS+F E ++E +T+++G+ G GKS + +A+ G T Sbjct: 2 LTSIAISNF-AIVESLELELKKGMTVISGETGAGKSIMVDALSLCLGGRTDAGV 54 >gi|323144958|ref|ZP_08079518.1| conserved domain protein [Succinatimonas hippei YIT 12066] gi|322415237|gb|EFY06011.1| conserved domain protein [Succinatimonas hippei YIT 12066] Length = 632 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L EI +FRG + KI F + +++ G+N +GKSSL A+ W+ G ++ Sbjct: 1 MYLETAEIFNFRGIRHL-KINFEEDSSVLIGENSWGKSSLLSAL-WMMLGTGEK 52 >gi|310817865|ref|YP_003950223.1| DNA replication and repair protein RecF [Stigmatella aurantiaca DW4/3-1] gi|309390937|gb|ADO68396.1| DNA replication and repair protein RecF [Stigmatella aurantiaca DW4/3-1] Length = 481 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL ++ +FR ++ + H TI GQNG GK++L EA+ +L R Sbjct: 1 MRLLALQAQNFRNLHQVSLAP-SPHATIAVGQNGQGKTNLLEALYFLATLKPLRAGRLAE 59 Query: 87 IKKRSIKTPM 96 + + K Sbjct: 60 LVRWGTKGAR 69 >gi|291615641|ref|YP_003518383.1| RecF [Pantoea ananatis LMG 20103] gi|291150671|gb|ADD75255.1| RecF [Pantoea ananatis LMG 20103] gi|327395907|dbj|BAK13329.1| DNA replication and repair protein RecF [Pantoea ananatis AJ13355] Length = 361 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EQADLALAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|282857634|ref|ZP_06266850.1| exonuclease SbcCD, C subunit [Pyramidobacter piscolens W5455] gi|282584524|gb|EFB89876.1| exonuclease SbcCD, C subunit [Pyramidobacter piscolens W5455] Length = 299 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + ++F L + G G GKS+L +A+ YG T R Sbjct: 1 MRLCRLHFKNLNSLAGEWNVDFESPEFRGGLFAITGPTGAGKSTLLDAVCLALYGRTPR 59 >gi|229005078|ref|ZP_04162802.1| Exonuclease [Bacillus mycoides Rock1-4] gi|228756180|gb|EEM05501.1| Exonuclease [Bacillus mycoides Rock1-4] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F+D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQREVIDFSDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + I T + + + +Y++K Sbjct: 61 RSQFADDNIYTSVELTFQLKGKQYEIK 87 >gi|188534675|ref|YP_001908472.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99] gi|188029717|emb|CAO97596.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99] Length = 1119 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|254253821|ref|ZP_04947138.1| hypothetical protein BDAG_03100 [Burkholderia dolosa AUO158] gi|124898466|gb|EAY70309.1| hypothetical protein BDAG_03100 [Burkholderia dolosa AUO158] Length = 395 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ IEI +FR F + KI L ++ G NG GKS+L + +L Sbjct: 1 MQIESIEIKNFRLFKD-AKISRIPRLCVLVGANGTGKSTLFDVFSFL 46 >gi|78187987|ref|YP_378325.1| RecF protein [Chlorobium chlorochromatii CaD3] gi|78170186|gb|ABB27282.1| RecF protein [Chlorobium chlorochromatii CaD3] Length = 364 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 KL S FR T + E ++ +TI+ G NG GK+SL E I + Sbjct: 1 MKLQRTIFSGFRNHTSLL-FEPSEGVTIIYGANGSGKTSLLEGIHY 45 >gi|310764833|gb|ADP09783.1| recombination and repair protein [Erwinia sp. Ejp617] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LSQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|292489109|ref|YP_003531996.1| DNA repair protein RecN [Erwinia amylovora CFBP1430] gi|292900229|ref|YP_003539598.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291200077|emb|CBJ47203.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291554543|emb|CBA22132.1| DNA repair protein recN (Recombination protein N) [Erwinia amylovora CFBP1430] gi|312173267|emb|CBX81522.1| DNA repair protein recN (Recombination protein N) [Erwinia amylovora ATCC BAA-2158] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LSQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|241889743|ref|ZP_04777041.1| DNA replication and repair protein RecF [Gemella haemolysans ATCC 10379] gi|241863365|gb|EER67749.1| DNA replication and repair protein RecF [Gemella haemolysans ATCC 10379] Length = 378 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ +++ +FR + IE L ++ G N GK+++ E+I L G + R K Sbjct: 1 MKIKSLKLLYFRNYLS-TNIEVHPSLNVLVGNNANGKTNIIESIFCLALGKSYRTKSDS 58 >gi|228965331|ref|ZP_04126423.1| Exonuclease [Bacillus thuringiensis serovar sotto str. T04001] gi|228794321|gb|EEM41835.1| Exonuclease [Bacillus thuringiensis serovar sotto str. T04001] Length = 496 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|228997433|ref|ZP_04157052.1| Exonuclease [Bacillus mycoides Rock3-17] gi|228762309|gb|EEM11236.1| Exonuclease [Bacillus mycoides Rock3-17] Length = 1022 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F+D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQREVIDFSDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + I T + + + +Y++K Sbjct: 61 RSQFADDNIYTSVELTFQLKGKQYEIK 87 >gi|229060128|ref|ZP_04197498.1| Purine NTPase [Bacillus cereus AH603] gi|228719168|gb|EEL70778.1| Purine NTPase [Bacillus cereus AH603] Length = 787 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--------RKHGD 85 + +F+ E ++L +++G NG+GK+++ +AIE + G +R G Sbjct: 3 LENFKSIDEAIVTFNGENLNVLDGPNGFGKTTIYDAIELVLTGGIKRISLNKIVTTTRGF 62 Query: 86 SIKKRSIKTPMPMCMAVPRC 105 + S P + V C Sbjct: 63 NDHLLSKDQNKPTLVKVEFC 82 >gi|259907662|ref|YP_002648018.1| recombination and repair protein [Erwinia pyrifoliae Ep1/96] gi|224963284|emb|CAX54769.1| Protein used in recombination and DNA repair (DNA repair protein RecN) [Erwinia pyrifoliae Ep1/96] gi|283477509|emb|CAY73425.1| DNA repair protein recN (Recombination protein N) [Erwinia pyrifoliae DSM 12163] Length = 553 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LSQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|162456585|ref|YP_001618952.1| hypothetical protein sce8302 [Sorangium cellulosum 'So ce 56'] gi|161167167|emb|CAN98472.1| hypothetical protein sce8302 [Sorangium cellulosum 'So ce 56'] Length = 443 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +I + +FR F E + LT++ G+NG GK+++ E + Sbjct: 1 MRIDEIRLINFRAF-ERFALHLEPRLTVLVGRNGTGKTTVLEGLAVALG 48 >gi|152972607|ref|YP_001337753.1| recombination protein F [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330005215|ref|ZP_08305174.1| DNA replication and repair protein RecF [Klebsiella sp. MS 92-3] gi|166220712|sp|A6TG02|RECF_KLEP7 RecName: Full=DNA replication and repair protein recF gi|150957456|gb|ABR79486.1| recombination protein F [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328536347|gb|EGF62709.1| DNA replication and repair protein RecF [Klebsiella sp. MS 92-3] Length = 357 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|303236651|ref|ZP_07323232.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302483155|gb|EFL46169.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 63 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L + I ++ E Q +F++ G NG GKS+L EAI +F G ++++ Sbjct: 1 MRLKSLYIQEYKNIKE-QTFDFSNNTGYIAFIGLNGSGKSNLIEAIALIFNGILNKKRYL 59 Query: 85 DSIK 88 ++K Sbjct: 60 SNMK 63 >gi|302380522|ref|ZP_07268987.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|303233765|ref|ZP_07320419.1| conserved hypothetical protein [Finegoldia magna BVS033A4] gi|302311465|gb|EFK93481.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|302495199|gb|EFL54951.1| conserved hypothetical protein [Finegoldia magna BVS033A4] Length = 527 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + DI +++F+ + E E ++ + ++ G + GK++L A+ W+ + Sbjct: 1 MYITDIYLTNFQSY-EQGHFELSEKVNLITGASDSGKTALIRALSWVLF 48 >gi|229155939|ref|ZP_04284040.1| Exonuclease [Bacillus cereus ATCC 4342] gi|228627546|gb|EEK84272.1| Exonuclease [Bacillus cereus ATCC 4342] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|206579462|ref|YP_002235888.1| DNA replication and repair protein RecF [Klebsiella pneumoniae 342] gi|290511691|ref|ZP_06551059.1| DNA replication and repair protein recF [Klebsiella sp. 1_1_55] gi|226737806|sp|B5XT53|RECF_KLEP3 RecName: Full=DNA replication and repair protein recF gi|206568520|gb|ACI10296.1| DNA replication and repair protein RecF [Klebsiella pneumoniae 342] gi|289775481|gb|EFD83481.1| DNA replication and repair protein recF [Klebsiella sp. 1_1_55] Length = 357 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIKDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|42521653|ref|NP_967033.1| DNA repair and genetic recombination protein [Bdellovibrio bacteriovorus HD100] gi|39574183|emb|CAE77687.1| DNA repair and genetic recombination protein [Bdellovibrio bacteriovorus HD100] Length = 374 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +FR + ++ + F+ + + G+NG GK++L EA+ + G + R Sbjct: 4 ERLRLVNFRNYRDVV-LSFSPRVNVFLGENGQGKTNLLEAMYMISQGDSFR 53 >gi|37527769|ref|NP_931114.1| nuclease sbcCD subunit C [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787205|emb|CAE16285.1| Nuclease sbcCD subunit C [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1228 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|114332377|ref|YP_748599.1| SMC domain-containing protein [Nitrosomonas eutropha C91] gi|114309391|gb|ABI60634.1| SMC domain protein [Nitrosomonas eutropha C91] Length = 1083 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L I + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MRILQIRFKNLNSLVGEWQIDLTHPAFTSDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|114563621|ref|YP_751134.1| SMC domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334914|gb|ABI72296.1| SMC domain protein [Shewanella frigidimarina NCIMB 400] Length = 1232 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F + L + G G GK+++ +AI Y T R Sbjct: 1 MKILSLRFKNINSLKNEWKIDFTQSPFAENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 >gi|229102944|ref|ZP_04233635.1| Exonuclease [Bacillus cereus Rock3-28] gi|228680469|gb|EEL34655.1| Exonuclease [Bacillus cereus Rock3-28] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDDVYTSVELTFQLKGKRYEIK 87 >gi|225685108|gb|EEH23392.1| dna repair protein rad18 [Paracoccidioides brasiliensis Pb03] Length = 1161 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E +F E ++ + + G+NG GKS++ AI G G S+K Sbjct: 119 IERVECYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTAITLCLGGKASVTNRGQSLK 177 >gi|254431064|ref|ZP_05044767.1| DNA replication and repair protein RecF [Cyanobium sp. PCC 7001] gi|197625517|gb|EDY38076.1| DNA replication and repair protein RecF [Cyanobium sp. PCC 7001] Length = 391 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 AC +L ++ R +L +E+ FR T ++ +V G NG GKS+L E + Sbjct: 9 ACSGLTLAAHRFRP--IRLERLELLQFRNIT-RLELNLEASRLLVLGPNGEGKSNLLEGV 65 Query: 71 EWLFYGYTQRRKHGDSIKKRS 91 E L T R + ++ Sbjct: 66 ELLGSLRTHRTGSDRDLIQQG 86 >gi|27764621|ref|NP_776243.1| Yga2G [Corynebacterium glutamicum] gi|27657792|gb|AAO18220.1| Yga2G [Corynebacterium glutamicum] Length = 645 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + +S+F+ F + D +T V G NG GK+++ EA+ LF +R Sbjct: 1 MKITVLRLSNFQSFGQGPTSLNLTD-ITYVLGPNGAGKTAVLEALSRLFSPVAAQR 55 >gi|320582364|gb|EFW96581.1| SMC chromosomal ATPase, putative [Pichia angusta DL-1] Length = 1092 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRKHG 84 +L +++ +F ++ + + F + ++ G NG GKS+ AI G + + Sbjct: 36 ILRVKLRNFMSYS-LTEFHFGPKMNLIIGPNGTGKSTFVCAICIGLAGKLEYLGKSSMNV 94 Query: 85 DSIKKRSIK 93 D K K Sbjct: 95 DHFIKSGQK 103 >gi|300769989|ref|ZP_07079868.1| recombination protein F [Sphingobacterium spiritivorum ATCC 33861] gi|300762465|gb|EFK59282.1| recombination protein F [Sphingobacterium spiritivorum ATCC 33861] Length = 368 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + +F+ +TE +EF + G+NG GK++L +AI +L Sbjct: 1 MWLKQLSVLNFKNYTESA-LEFLPEVNAFAGENGAGKTNLLDAIHYL 46 >gi|295397721|ref|ZP_06807793.1| DNA repair protein RecN [Aerococcus viridans ATCC 11563] gi|294974050|gb|EFG49805.1| DNA repair protein RecN [Aerococcus viridans ATCC 11563] Length = 564 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F E I+F +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQHLTIKNF-AIIEDLTIDFDSGMTVLTGETGAGKSIIIDAVGLLVGG----RGSTDFIR 56 Query: 89 KRSIK 93 S K Sbjct: 57 YGSEK 61 >gi|238892776|ref|YP_002917510.1| putative exonuclease [Klebsiella pneumoniae NTUH-K2044] gi|238545092|dbj|BAH61443.1| putative exonuclease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 343 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 27 FKLLDIEISHFRGFTE--IQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I IS F+ + Q I+ LT G NG GKS+ EA+ Sbjct: 1 MQLKKIFISGFKSISNQNPQTIDLEHELTTFIGHNGTGKSTAMEAL 46 >gi|229196573|ref|ZP_04323317.1| Exonuclease [Bacillus cereus m1293] gi|228586929|gb|EEK45003.1| Exonuclease [Bacillus cereus m1293] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|227538439|ref|ZP_03968488.1| recombination protein F [Sphingobacterium spiritivorum ATCC 33300] gi|227241721|gb|EEI91736.1| recombination protein F [Sphingobacterium spiritivorum ATCC 33300] Length = 368 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + +F+ +TE +EF + G+NG GK++L +AI +L Sbjct: 1 MWLKQLSVLNFKNYTESA-LEFLPEVNAFAGENGAGKTNLLDAIHYL 46 >gi|226294424|gb|EEH49844.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1161 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E +F E ++ + + G+NG GKS++ AI G G S+K Sbjct: 119 IERVECYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTAITLCLGGKASVTNRGQSLK 177 >gi|110596734|ref|ZP_01385024.1| SMC protein-like [Chlorobium ferrooxidans DSM 13031] gi|110341421|gb|EAT59881.1| SMC protein-like [Chlorobium ferrooxidans DSM 13031] Length = 843 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 29 LLDIEI----SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +E+ + F+ + F +TI+ G NG GKSSL EA++ L RR Sbjct: 75 IERLEVIGPFNGFKRLGDSLVASFPKRVTIIFGSNGSGKSSLCEALQILASNDAPRR 131 >gi|219666173|ref|YP_002456608.1| SMC domain protein [Desulfitobacterium hafniense DCB-2] gi|219536433|gb|ACL18172.1| SMC domain protein [Desulfitobacterium hafniense DCB-2] Length = 395 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++++++ F + L +V G NG GKS+L +AI Sbjct: 10 IKELKLANLLSFGSETTDIQLNSLNVVVGPNGSGKSNLIDAI 51 >gi|332686263|ref|YP_004456037.1| DNA repair protein RecN [Melissococcus plutonius ATCC 35311] gi|332370272|dbj|BAK21228.1| DNA repair protein RecN [Melissococcus plutonius ATCC 35311] Length = 559 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSIKNF-AIISFLQLEFQSGMTVLTGETGAGKSIIIDAMALLVGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGTSKCTLEGLFKMPK 72 >gi|313905524|ref|ZP_07838887.1| SMC domain protein [Eubacterium cellulosolvens 6] gi|313469587|gb|EFR64926.1| SMC domain protein [Eubacterium cellulosolvens 6] Length = 1060 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K + + +S F + + IEF+ L +++G G GK+++ +AI + YG T Sbjct: 1 MKPVKLIMSAFGPYADEMPAIEFSTFEDKGLFLISGDTGAGKTTIFDAICFALYGETSGS 60 Query: 82 KHGDSIKKRSIKTP 95 + Sbjct: 61 YRDTKNLRSEYAKE 74 >gi|299143834|ref|ZP_07036914.1| DNA repair protein RecN [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518319|gb|EFI42058.1| DNA repair protein RecN [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 554 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL++ I +F E ++EF L ++ G+ G GKS + +A+ + + Sbjct: 2 LLELSIKNF-AIIEDLRVEFEKGLNVITGETGSGKSIIIDALSMVLGARASKDV 54 >gi|229173043|ref|ZP_04300594.1| Exonuclease [Bacillus cereus MM3] gi|228610376|gb|EEK67647.1| Exonuclease [Bacillus cereus MM3] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|195504888|ref|XP_002099272.1| GE10818 [Drosophila yakuba] gi|194185373|gb|EDW98984.1| GE10818 [Drosophila yakuba] Length = 1131 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + +++F + IEF ++ + G NG GKS++ A+ + SI Sbjct: 107 KVISMRLTNFMCHS-NLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 165 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 +K +++ C L+ Sbjct: 166 QKLIKNGEASATISITLCNAGLR 188 >gi|156543634|ref|XP_001604641.1| PREDICTED: similar to KIAA0594 protein [Nasonia vitripennis] Length = 1059 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I + +F + + ++ +L ++ G NG GKS++ AI G Sbjct: 16 ITRIAMKNFVTY-DEVVVKPGKNLNLIIGPNGTGKSTIVSAIVLGLGGS 63 >gi|326536438|ref|YP_004300868.1| endonuclease subunit [Aeromonas phage 65] gi|40795444|gb|AAR90909.1| endonuclease subunit [Aeromonas phage 65] Length = 775 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 24/38 (63%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 T+V G NG GKS++ EA+ +L YG + R+ + + + Sbjct: 31 TLVTGTNGAGKSTMIEALSFLLYGKSYRKLKKEQLINQ 68 >gi|313499852|gb|ADR61218.1| SbcC [Pseudomonas putida BIRD-1] Length = 1214 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|307701158|ref|ZP_07638180.1| exonuclease SbcCD, C subunit [Mobiluncus mulieris FB024-16] gi|307613552|gb|EFN92799.1| exonuclease SbcCD, C subunit [Mobiluncus mulieris FB024-16] Length = 1064 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + F + ++F + L +++G G GKS++ +A+ YG Sbjct: 1 MRFHRLTMEGVGSFAHREVVDFDALGSQGLFLIHGDTGAGKSTILDALFCALYGS 55 >gi|306819533|ref|ZP_07453240.1| exonuclease sbcc [Mobiluncus mulieris ATCC 35239] gi|304647825|gb|EFM45143.1| exonuclease sbcc [Mobiluncus mulieris ATCC 35239] Length = 1064 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + F + ++F + L +++G G GKS++ +A+ YG Sbjct: 1 MRFHRLTMEGVGSFAHREVVDFDALGSQGLFLIHGDTGAGKSTILDALFCALYGS 55 >gi|304380426|ref|ZP_07363105.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341033|gb|EFM06954.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 729 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 + ++I +FR + E + F + + G+N GK++ A+ L Y Y+ + Sbjct: 1 MFISTLQIRNFRNY-ESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLK 59 Query: 84 GDS 86 Sbjct: 60 ESD 62 >gi|269977990|ref|ZP_06184943.1| putative nuclease sbcCD subunit C [Mobiluncus mulieris 28-1] gi|269933837|gb|EEZ90418.1| putative nuclease sbcCD subunit C [Mobiluncus mulieris 28-1] Length = 1064 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + F + ++F + L +++G G GKS++ +A+ YG Sbjct: 1 MRFHRLTMEGVGSFAHREVVDFDALGSQGLFLIHGDTGAGKSTILDALFCALYGS 55 >gi|269962693|ref|ZP_06177038.1| recF protein [Vibrio harveyi 1DA3] gi|269832616|gb|EEZ86730.1| recF protein [Vibrio harveyi 1DA3] Length = 359 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I+ + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IDLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|261206946|ref|ZP_05921635.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566767|ref|ZP_06447180.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|260078574|gb|EEW66276.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161444|gb|EFD09331.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|302179968|gb|ADK98536.1| hypothetical protein [Enterococcus faecium] Length = 729 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 + ++I +FR + E + F + + G+N GK++ A+ L Y Y+ + Sbjct: 1 MFISTLQIRNFRNY-ESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLK 59 Query: 84 GDS 86 Sbjct: 60 ESD 62 >gi|229139052|ref|ZP_04267629.1| Exonuclease [Bacillus cereus BDRD-ST26] gi|228644407|gb|EEL00662.1| Exonuclease [Bacillus cereus BDRD-ST26] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQKEVIDFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|227876258|ref|ZP_03994374.1| exonuclease sbcc [Mobiluncus mulieris ATCC 35243] gi|227843219|gb|EEJ53412.1| exonuclease sbcc [Mobiluncus mulieris ATCC 35243] Length = 1064 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + F + ++F + L +++G G GKS++ +A+ YG Sbjct: 1 MRFHRLTMEGVGSFAHREVVDFDALGSQGLFLIHGDTGAGKSTILDALFCALYGS 55 >gi|226362898|ref|YP_002780678.1| recombination protein F [Rhodococcus opacus B4] gi|254790485|sp|C1B7T0|RECF_RHOOB RecName: Full=DNA replication and repair protein recF gi|226241385|dbj|BAH51733.1| DNA replication and repair protein RecF [Rhodococcus opacus B4] Length = 410 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + + T+ G NG+GK+++ EA+ +L + R Sbjct: 1 MFVRALSLRDFRSW-DALGLNLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIRTGTAQ 67 >gi|169824452|ref|YP_001692063.1| exonuclease SbcC-like protein [Finegoldia magna ATCC 29328] gi|167831257|dbj|BAG08173.1| exonuclease SbcC homolog [Finegoldia magna ATCC 29328] Length = 527 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + DI +++F+ + E E ++ + ++ G + GK++L A+ W+ + Sbjct: 1 MYITDIYLTNFQSY-EQGHFELSEKVNLITGASDSGKTALIRALSWVLF 48 >gi|153835129|ref|ZP_01987796.1| DNA replication and repair protein RecF [Vibrio harveyi HY01] gi|156972779|ref|YP_001443686.1| recombination protein F [Vibrio harveyi ATCC BAA-1116] gi|166221877|sp|A7N1F1|RECF_VIBHB RecName: Full=DNA replication and repair protein recF gi|148868401|gb|EDL67515.1| DNA replication and repair protein RecF [Vibrio harveyi HY01] gi|156524373|gb|ABU69459.1| hypothetical protein VIBHAR_00444 [Vibrio harveyi ATCC BAA-1116] Length = 357 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I+ + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IDLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|108562793|ref|YP_627109.1| hypothetical protein HPAG1_0368 [Helicobacter pylori HPAG1] gi|107836566|gb|ABF84435.1| hypothetical protein HPAG1_0368 [Helicobacter pylori HPAG1] Length = 370 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + +I+ L I+ G N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGGNNVGKSNLLEAL-YCLVGKS 49 >gi|26988749|ref|NP_744174.1| SMC domain protein [Pseudomonas putida KT2440] gi|24983542|gb|AAN67638.1|AE016393_7 exonuclease SbcC [Pseudomonas putida KT2440] Length = 1214 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|82523805|emb|CAI78548.1| DNA replication and repair protein RecF [uncultured Chloroflexi bacterium] Length = 409 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + +++FR FT ++ ++ G N GK+SL EA+ +L Sbjct: 1 MYLTHLSLTNFRNFT-RLDLDVPKGSILLVGDNAQGKTSLLEAVYYLAT 48 >gi|15923404|ref|NP_370938.1| hypothetical protein SAV0414 [Staphylococcus aureus subsp. aureus Mu50] gi|156978742|ref|YP_001441001.1| hypothetical protein SAHV_0411 [Staphylococcus aureus subsp. aureus Mu3] gi|221141394|ref|ZP_03565887.1| hypothetical protein SauraJ_07108 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|255005211|ref|ZP_05143812.2| hypothetical protein SauraM_02050 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257878680|ref|ZP_05658333.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|282926722|ref|ZP_06334350.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|294615440|ref|ZP_06695312.1| hypothetical protein EfmE1636_1537 [Enterococcus faecium E1636] gi|14246182|dbj|BAB56576.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|156720877|dbj|BAF77294.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257812908|gb|EEV41666.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|269939992|emb|CBI48367.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TW20] gi|282592149|gb|EFB97171.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|291591722|gb|EFF23359.1| hypothetical protein EfmE1636_1537 [Enterococcus faecium E1636] gi|302750304|gb|ADL64481.1| recombinational DNA repair ATPase, RecF_1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315036418|gb|EFT48350.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|323465473|gb|ADX77626.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] gi|329313131|gb|AEB87544.1| Recombinational DNA repair ATPase, RecF_1 [Staphylococcus aureus subsp. aureus T0131] Length = 729 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 + ++I +FR + E + F + + G+N GK++ A+ L Y Y+ + Sbjct: 1 MFISTLQIRNFRNY-ESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLK 59 Query: 84 GDS 86 Sbjct: 60 ESD 62 >gi|148548924|ref|YP_001269026.1| SMC domain-containing protein [Pseudomonas putida F1] gi|148512982|gb|ABQ79842.1| SMC domain protein [Pseudomonas putida F1] Length = 1214 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60 >gi|289168157|ref|YP_003446426.1| hypothetical protein smi_1318 [Streptococcus mitis B6] gi|288907724|emb|CBJ22561.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 728 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 + ++I +FR + E + F + + G+N GK++ A+ L Y Y+ + Sbjct: 1 MFISTLQIRNFRNY-ESEIFRFDNETNTIIGENDSGKTNALTALRILLDDSYYYSSKTLK 59 Query: 84 GDS 86 Sbjct: 60 ESD 62 >gi|332663918|ref|YP_004446706.1| hypothetical protein Halhy_1948 [Haliscomenobacter hydrossis DSM 1100] gi|332332732|gb|AEE49833.1| hypothetical protein Halhy_1948 [Haliscomenobacter hydrossis DSM 1100] Length = 652 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 + + IS+++ F Q + + + +V G+N GK++ E + + Sbjct: 1 MYIKKVRISNYKSFNGTQDVLLSRGINLVVGKNNVGKTAFLETLTF 46 >gi|228991357|ref|ZP_04151313.1| Exonuclease [Bacillus pseudomycoides DSM 12442] gi|228768375|gb|EEM16982.1| Exonuclease [Bacillus pseudomycoides DSM 12442] Length = 1022 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F+D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQREVIDFSDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + I T + + + +Y++K Sbjct: 61 RSQFADDNIYTSVELTFQLKGKQYEIK 87 >gi|34540533|ref|NP_905012.1| antigen PgaA [Porphyromonas gingivalis W83] gi|1296973|emb|CAA65182.1| pgaA [Porphyromonas gingivalis] gi|34396846|gb|AAQ65911.1| antigen PgaA [Porphyromonas gingivalis W83] Length = 445 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I I FR +++ F + ++ G NG GK+S+ +A +++ + Sbjct: 2 ISRIHIEEFRDIGDLELF-FLPGVNLLIGDNGSGKTSVLKACQYVLGTF 49 >gi|326335788|ref|ZP_08201968.1| exonuclease SbcC subfamily [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692027|gb|EGD33986.1| exonuclease SbcC subfamily [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 1016 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I + + Q+I+F+ L + G G GKSS+ EAI + YG T+R Sbjct: 6 LTIEGIYSYQKRQEIDFSLLTEAGLFGIFGAVGSGKSSILEAITFALYGRTER 58 >gi|254411737|ref|ZP_05025513.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196181459|gb|EDX76447.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 354 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +E+ +F+ F+ +F D + ++ G NG GK+SL +AI T Sbjct: 1 MKVQSVELKYFKKFSNPPVFDFTDSETGLARDIIVLIGMNGAGKTSLLQAIAATLGVATG 60 Query: 80 R 80 R Sbjct: 61 R 61 >gi|161505633|ref|YP_001572745.1| recombination protein F [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039638|sp|A9MJU2|RECF_SALAR RecName: Full=DNA replication and repair protein recF gi|160866980|gb|ABX23603.1| hypothetical protein SARI_03809 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 357 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|73670173|ref|YP_306188.1| hypothetical protein Mbar_A2704 [Methanosarcina barkeri str. Fusaro] gi|72397335|gb|AAZ71608.1| hypothetical protein Mbar_A2704 [Methanosarcina barkeri str. Fusaro] Length = 581 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + ++++ +FR + I F + TI+ G+N GKS++ EA+ Sbjct: 2 IKELQLINFRCYR-KHSIPFKQN-TIIVGENNAGKSTIIEALR 42 >gi|110640083|ref|YP_680293.1| DNA replication and repair protein [Cytophaga hutchinsonii ATCC 33406] gi|123354188|sp|Q11NR3|RECF_CYTH3 RecName: Full=DNA replication and repair protein recF gi|110282764|gb|ABG60950.1| DNA replication and repair protein [Cytophaga hutchinsonii ATCC 33406] Length = 377 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I + +F+ + E++ + F+ + + G NG GK++L ++I + Sbjct: 1 MYIEKISLLNFKNYPELE-LSFSAGINLFAGLNGSGKTNLLDSI-YCL 46 >gi|323493783|ref|ZP_08098901.1| recombination protein F [Vibrio brasiliensis LMG 20546] gi|323311917|gb|EGA65063.1| recombination protein F [Vibrio brasiliensis LMG 20546] Length = 360 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR IE + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IELSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|224823695|ref|ZP_03696804.1| SMC domain protein [Lutiella nitroferrum 2002] gi|224604150|gb|EEG10324.1| SMC domain protein [Lutiella nitroferrum 2002] Length = 937 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHG 84 +F++ +E+ H+ F + + + + G NG GK++L +A+ L + +R + Sbjct: 1 MFQMKAVEMVHW-DFWQRLTVPLDAQIVTIIGPNGSGKTTLLDAMRTLLAIKCSGKRDYK 59 Query: 85 DSIK 88 ++ Sbjct: 60 RYVR 63 >gi|194909859|ref|XP_001982025.1| GG12364 [Drosophila erecta] gi|190656663|gb|EDV53895.1| GG12364 [Drosophila erecta] Length = 1130 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + +++F + IEF ++ + G NG GKS++ A+ + +I Sbjct: 106 KVISMRLTNFMCHS-NLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASNI 164 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 +K +++ C L+ Sbjct: 165 QKLIKNGEASATISITLCNAGLR 187 >gi|148271182|ref|YP_001220743.1| recombination protein F [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166220703|sp|A5CLT6|RECF_CLAM3 RecName: Full=DNA replication and repair protein recF gi|147829112|emb|CAN00009.1| DNA replication and repair protein RecF [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 404 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + FR +T + T+ G NG GK++L EA+ +L + R ++ Sbjct: 3 VRHLSLGDFRNYT-RADVALLPGATLFVGSNGQGKTNLVEALGFLSTLGSHRVSTDQALI 61 Query: 89 KRSIKT 94 ++ ++ Sbjct: 62 RQGAES 67 >gi|126724508|ref|ZP_01740351.1| recombination protein F [Rhodobacterales bacterium HTCC2150] gi|126705672|gb|EBA04762.1| recombination protein F [Rhodobacterales bacterium HTCC2150] Length = 371 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L DI +SHFR + + + G NG GK+++ EA+ L G RR D + Sbjct: 8 LGDIALSHFRSHKLLNQ-PLDGRPVAIFGPNGAGKTNILEAVSLLSPGRGLRRATADDLS 66 Query: 89 KR 90 ++ Sbjct: 67 RK 68 >gi|114704369|ref|ZP_01437277.1| DNA replication and repair protein [Fulvimarina pelagi HTCC2506] gi|114539154|gb|EAU42274.1| DNA replication and repair protein [Fulvimarina pelagi HTCC2506] Length = 385 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 SY A ++ + + FR + E+ + F + G NG GK++L EA+ L G Sbjct: 2 SYAAMGRQSEIGHLRLFDFRNY-ELLDLSFQKRFVVFAGPNGAGKTNLLEALSLLSPGRG 60 Query: 79 QRRKHGDSIKKRSIKT 94 RR + ++ ++ Sbjct: 61 LRRAPYGEMARQGTQS 76 >gi|91087405|ref|XP_975667.1| PREDICTED: similar to structural maintenance of chromosomes 5 smc5 [Tribolium castaneum] gi|270009507|gb|EFA05955.1| hypothetical protein TcasGA2_TC008773 [Tribolium castaneum] Length = 1043 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + IE+ +F ++ + +L ++ G NG GKS++ AI G + G Sbjct: 7 IRKIEVKNFVTYSYAELYP-GPNLNMLIGPNGTGKSTIVAAIILGLGGNPKTVGRG 61 >gi|71279169|ref|YP_269553.1| exonuclease SbcC [Colwellia psychrerythraea 34H] gi|71144909|gb|AAZ25382.1| exonuclease SbcC [Colwellia psychrerythraea 34H] Length = 1308 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + KI+F+ + L + G G GK+++ +AI Y T R Sbjct: 1 MRILSLRFENINSLKGSWKIDFSEAPFDNNGLFAITGPTGAGKTTILDAICLALYHQTPR 60 >gi|288818022|ref|YP_003432369.1| ATP-dependent dsDNA exonuclease C subunit [Hydrogenobacter thermophilus TK-6] gi|288787421|dbj|BAI69168.1| ATP-dependent dsDNA exonuclease C subunit [Hydrogenobacter thermophilus TK-6] gi|308751623|gb|ADO45106.1| SMC domain protein [Hydrogenobacter thermophilus TK-6] Length = 963 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Query: 32 IEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +++ +F + ++Q+I+F+D + I+ G+ G GK+S+ +A+ + YG R Sbjct: 6 LKLENFTTYKKLQEIDFSDLNFFIIQGRTGAGKTSIIDAMCYALYGKVPR 55 >gi|303310495|ref|XP_003065259.1| hypothetical protein CPC735_044840 [Coccidioides posadasii C735 delta SOWgp] gi|240104921|gb|EER23114.1| hypothetical protein CPC735_044840 [Coccidioides posadasii C735 delta SOWgp] Length = 1126 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S++ Sbjct: 86 IERVDCYNFMCH-EHLSMELGPLINFIVGKNGSGKSAVLSALTICLGGKASATNRGQSLR 144 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 K IK V R K Q Sbjct: 145 KF-IKEGKESATIVVRIKNQ 163 >gi|119195457|ref|XP_001248332.1| DNA repair protein homolog [Coccidioides immitis RS] Length = 1126 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S++ Sbjct: 86 IERVDCYNFMCH-EHLSMELGPLINFIVGKNGSGKSAVLSALTICLGGKASATNRGQSLR 144 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 K IK V R K Q Sbjct: 145 KF-IKEGKESATIVVRIKNQ 163 >gi|320034927|gb|EFW16870.1| DNA repair protein Rad18 [Coccidioides posadasii str. Silveira] Length = 1126 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S++ Sbjct: 86 IERVDCYNFMCH-EHLSMELGPLINFIVGKNGSGKSAVLSALTICLGGKASATNRGQSLR 144 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 K IK V R K Q Sbjct: 145 KF-IKEGKESATIVVRIKNQ 163 >gi|149174069|ref|ZP_01852697.1| hypothetical protein PM8797T_12808 [Planctomyces maris DSM 8797] gi|148847049|gb|EDL61384.1| hypothetical protein PM8797T_12808 [Planctomyces maris DSM 8797] Length = 1409 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I ++ F + ++ + + G N GKS+L I + YG+ S Sbjct: 1 MKITRIHVNQFGNWQDLNLAALDPGINVFYGPNETGKSTLMRMIRGILYGFQSDELREHS 60 >gi|189501444|ref|YP_001960914.1| SMC domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496885|gb|ACE05433.1| SMC domain protein [Chlorobium phaeobacteroides BS1] Length = 1085 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L++ + + I+F + + + G G GKS++ +AI YG T R Sbjct: 1 MKILELRLKNLNSLYGEWIIDFTEPEYLSSGIFALTGPTGAGKSTVLDAICLALYGSTPR 60 >gi|330874185|gb|EGH08334.1| hypothetical protein Pgy4_05722 [Pseudomonas syringae pv. glycinea str. race 4] Length = 489 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + +S FR F ++ + +T + G N GK++L A+ LF +R Sbjct: 1 MRIESVSLSGFRCFGPNPITVDVSAEITTIVGPNAAGKTALLHAMLKLFGVTRAQR 56 >gi|320329789|gb|EFW85777.1| hypothetical protein PsgRace4_11051 [Pseudomonas syringae pv. glycinea str. race 4] Length = 661 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + +S FR F ++ + +T + G N GK++L A+ LF +R Sbjct: 1 MRIESVSLSGFRCFGPNPITVDVSAEITTIVGPNAAGKTALLHAMLKLFGVTRAQR 56 >gi|320322902|gb|EFW78993.1| hypothetical protein PsgB076_20607 [Pseudomonas syringae pv. glycinea str. B076] Length = 333 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + +S FR F ++ + +T + G N GK++L A+ LF +R Sbjct: 1 MRIESVSLSGFRCFGPNPITVDVSAEITTIVGPNAAGKTALLHAMLKLFGVTRAQR 56 >gi|302807823|ref|XP_002985605.1| hypothetical protein SELMODRAFT_157483 [Selaginella moellendorffii] gi|300146514|gb|EFJ13183.1| hypothetical protein SELMODRAFT_157483 [Selaginella moellendorffii] Length = 1045 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 + I + +F +++I L +V G NG GKSSL A+ G Q G Sbjct: 5 ITQIRVHNFMTYSDITSKP-GPRLNLVIGPNGTGKSSLVCALAIGLGGEPQLLGRAGHIG 63 Query: 85 DSIKK 89 D +K+ Sbjct: 64 DYVKR 68 >gi|288553321|ref|YP_003425256.1| DNA repair and genetic recombination [Bacillus pseudofirmus OF4] gi|288544481|gb|ADC48364.1| DNA repair and genetic recombination [Bacillus pseudofirmus OF4] Length = 574 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L+++ I HF + I F LT++ G+ G GKS + +AI L G Sbjct: 2 LVELSIKHF-AIIDELTIPFEKGLTVLTGETGAGKSIIIDAIGLLLGG 48 >gi|229030065|ref|ZP_04186129.1| Exonuclease [Bacillus cereus AH1271] gi|228731235|gb|EEL82153.1| Exonuclease [Bacillus cereus AH1271] Length = 1022 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVINFNDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 90 RSIKTPMPMCMAVPRCKYQLK 110 RS M +V +QLK Sbjct: 61 RSQFADDNMYTSV-ELTFQLK 80 >gi|149204084|ref|ZP_01881052.1| hypothetical protein RTM1035_11200 [Roseovarius sp. TM1035] gi|149142526|gb|EDM30571.1| hypothetical protein RTM1035_11200 [Roseovarius sp. TM1035] Length = 641 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL + I HF+ + ++ +T + G+N GKS+ EA+ Sbjct: 1 MKLKTVRIDHFKHVLDSTEVAIQPDITCLVGKNESGKSAFLEALR 45 >gi|89074700|ref|ZP_01161158.1| recombination protein F [Photobacterium sp. SKA34] gi|89049464|gb|EAR55025.1| recombination protein F [Photobacterium sp. SKA34] Length = 360 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + A + G NG GK+S+ EAI +L +G + R Sbjct: 1 MALTRLMVHDFRNIASCD-LALAAGFNFLVGPNGSGKTSVLEAIHYLGHGRSFRSHLTSR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|326801250|ref|YP_004319069.1| SMC domain protein [Sphingobacterium sp. 21] gi|326552014|gb|ADZ80399.1| SMC domain protein [Sphingobacterium sp. 21] Length = 1021 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 31 DIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 + I + + Q I FA L + G G GKSS+ EAI + YG T+R D Sbjct: 5 SLTIKGLFSYQKEQTINFARLIEGQLFGIFGSVGSGKSSVLEAIAFALYGETERLSTRDD 64 >gi|325294865|ref|YP_004281379.1| SMC domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065313|gb|ADY73320.1| SMC domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 905 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L +++ F + ++EF D ++ G+N GK+S+ I + +G + D Sbjct: 1 MIRLRSLKLEGFLSHR-LTELEFDDESYVILGENASGKTSILRGIFFALFG---KDFSSD 56 Query: 86 SIKKRSIKTPMPMCM 100 +++ K + + Sbjct: 57 KLERIVNKQTNKLSV 71 >gi|325280925|ref|YP_004253467.1| DNA replication and repair protein recF [Odoribacter splanchnicus DSM 20712] gi|324312734|gb|ADY33287.1| DNA replication and repair protein recF [Odoribacter splanchnicus DSM 20712] Length = 364 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L ++ I +F+ E + F G NG GK+++ +AI Sbjct: 1 MTLKELNIINFKNIAEAT-LTFTSGFNCFVGNNGVGKTNVLDAI 43 >gi|317498201|ref|ZP_07956502.1| ATP-binding protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894556|gb|EFV16737.1| ATP-binding protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 236 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 +++EF + + G+NG GKS+L EAI + +G+ + + + T +C A+ Sbjct: 32 ERLEFKNSINFFVGENGSGKSTLLEAIA-IAHGFNPEGGTKNYV-FSTHDTHSELCNAI 88 >gi|303229285|ref|ZP_07316080.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] gi|302516058|gb|EFL58005.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] Length = 635 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL +E+ +F+G T ++ + ++ G N GK+++ +++ WL +G Sbjct: 1 MKLTKLELLNFKGLTSFT-LDL-NGDVVIRGDNATGKTTVFDSVCWLLFG 48 >gi|294012623|ref|YP_003546083.1| putative endonuclease [Sphingobium japonicum UT26S] gi|292675953|dbj|BAI97471.1| putative endonuclease [Sphingobium japonicum UT26S] Length = 604 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I +FRG + I F+ H T++ G N GK+++ EA+ LF Sbjct: 1 MEIASLKIENFRG-VQNGMIRFSPH-TVLVGANNCGKTTVIEALALLFG 47 >gi|225677102|ref|ZP_03788104.1| recombination protein F [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590861|gb|EEH12086.1| recombination protein F [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 365 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR + + ++ D ++ G+NG GK+++ EAI L ++ I Sbjct: 6 YIKKLKLHNFRSHSNFE-LDSDDSSVVITGKNGIGKTNILEAISLLAKSNGMKKAKASEI 64 Query: 88 KKR 90 + R Sbjct: 65 QNR 67 >gi|89094335|ref|ZP_01167276.1| Nuclease sbcCD subunit C [Oceanospirillum sp. MED92] gi|89081394|gb|EAR60625.1| Nuclease sbcCD subunit C [Oceanospirillum sp. MED92] Length = 1231 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + + KI+F + L + G G GK+S+ +AI Y T R Sbjct: 1 MRILSLRFKNINALRDEWKIDFTSGEFAENGLFAITGPTGAGKTSILDAICLALYHRTPR 60 >gi|146337178|ref|YP_001202226.1| recombination protein F [Bradyrhizobium sp. ORS278] gi|146189984|emb|CAL73976.1| DNA replication and repair protein recF [Bradyrhizobium sp. ORS278] Length = 378 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++HFR + + + + G NG GK++ EAI + G RR + + Sbjct: 5 RINRLSLTHFRSYRA-AGVSVQADMVALVGANGAGKTNCLEAISFFAPGRGLRRATLEDV 63 Query: 88 KKRSIK 93 Sbjct: 64 ADNQGD 69 >gi|134300409|ref|YP_001113905.1| SMC domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053109|gb|ABO51080.1| SMC domain protein [Desulfotomaculum reducens MI-1] Length = 984 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQK-----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + + + + E +K I + + G+NG GKSSL EAI + + R Sbjct: 1 MWVQRVRLKNIKSYGEGEKGQGVTIHLEPGINQIAGKNGAGKSSLIEAIGYALFDAEPLR 60 Query: 82 KH 83 + Sbjct: 61 GN 62 >gi|331010244|gb|EGH90300.1| hypothetical protein PSYTB_11213 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 777 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ IE+S F+ F I L ++G NGYGK+S+ +AIE L G R Sbjct: 4 QISKIEVSSFKAFKHIYLDLGESSLLTLDGPNGYGKTSIFDAIELLLTGQINR 56 >gi|328782551|ref|XP_001120037.2| PREDICTED: structural maintenance of chromosomes protein 5-like [Apis mellifera] Length = 1050 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 + I + +F + I+ +L ++ G NG GKS++ AI G Sbjct: 9 ITYIYLENFVTYN-KVCIKPGRNLNVIIGPNGTGKSTIVCAIVLGLGGKPSTIGRAIHVA 67 Query: 85 DSIKKRSIKTPMPMCM 100 D +K+ + + + + Sbjct: 68 DYVKRGCEEAKVEIHL 83 >gi|257486774|ref|ZP_05640815.1| putative RecF/RecN/SMC N domain [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 777 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ IE+S F+ F I L ++G NGYGK+S+ +AIE L G R Sbjct: 4 QISKIEVSSFKAFKHIYLDLGESSLLTLDGPNGYGKTSIFDAIELLLTGQINR 56 >gi|253687549|ref|YP_003016739.1| SMC domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754127|gb|ACT12203.1| SMC domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 253 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 22/35 (62%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++++KI F +T + G+NG GKS+L EA+ Sbjct: 33 SDLEKIHFHPDVTFLVGENGSGKSTLLEAVAIAMG 67 >gi|189462141|ref|ZP_03010926.1| hypothetical protein BACCOP_02823 [Bacteroides coprocola DSM 17136] gi|189431114|gb|EDV00099.1| hypothetical protein BACCOP_02823 [Bacteroides coprocola DSM 17136] Length = 373 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++ F+ + + G+NG GK++L +A+ +L + + Sbjct: 1 MWLKRISILNYKNL-EQVEVAFSRKMNCIIGKNGMGKTNLLDAVYYLSFCKSATN 54 >gi|163733264|ref|ZP_02140708.1| recombination protein F [Roseobacter litoralis Och 149] gi|161393799|gb|EDQ18124.1| recombination protein F [Roseobacter litoralis Och 149] Length = 366 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L ++ ISHFR + ++ + G NG GK+++ EA+ L G RR Sbjct: 1 MALHLTELMISHFRSHR-VARLMVDARPVALFGPNGAGKTNVLEAVSLLSPGRGLRRASA 59 Query: 85 DSIKKR 90 + +R Sbjct: 60 QDMTRR 65 >gi|114775605|ref|ZP_01451173.1| hypothetical protein SPV1_04733 [Mariprofundus ferrooxydans PV-1] gi|114553716|gb|EAU56097.1| hypothetical protein SPV1_04733 [Mariprofundus ferrooxydans PV-1] Length = 637 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + I +FRG Q ++F T++ G N GKS++ EA++ + Sbjct: 1 MRVRRLTIENFRGVRSGQ-VDF-RGHTLLVGGNNIGKSTVCEALDLVLG 47 >gi|83816476|ref|YP_445980.1| exonuclease SbcC, putative [Salinibacter ruber DSM 13855] gi|294507891|ref|YP_003571949.1| exonuclease SbcC [Salinibacter ruber M8] gi|83757870|gb|ABC45983.1| exonuclease SbcC, putative [Salinibacter ruber DSM 13855] gi|294344219|emb|CBH24997.1| exonuclease SbcC [Salinibacter ruber M8] Length = 1019 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%) Query: 31 DIEISHFRGF-TEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRKHG 84 +E+ +F + TE +EF + ++G NG GKS+L +A+ W +G + RRK Sbjct: 5 RLELKNFLSYGTEAPPLEFDHFDVACLSGGNGEGKSALLDAMTWAVWGAARKSSGRRKPD 64 Query: 85 DSIKKRSIK 93 + + + + Sbjct: 65 EELIRIGTR 73 >gi|319791344|ref|YP_004152984.1| hypothetical protein Varpa_0653 [Variovorax paradoxus EPS] gi|315593807|gb|ADU34873.1| hypothetical protein Varpa_0653 [Variovorax paradoxus EPS] Length = 521 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +S+F+ F + ++EF L ++ G N GKSS+ A+E + G R Sbjct: 4 IERLVLSNFKKF-DNLELEFDPELNLLIGDNEAGKSSVLLALELVMSGSRSR 54 >gi|254477767|ref|ZP_05091153.1| RecF/RecN/SMC N terminal domain, putative [Ruegeria sp. R11] gi|214032010|gb|EEB72845.1| RecF/RecN/SMC N terminal domain, putative [Ruegeria sp. R11] Length = 869 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L I + + R FT+ +I A L +++ N GKS++ +A+ LF+ Sbjct: 1 MRLTSIRLQNVRRFTDPVEINGIAPGLNLLSAPNEQGKSTIFDALHALFF 50 >gi|326334760|ref|ZP_08200966.1| DNA repair protein RecN [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693073|gb|EGD35006.1| DNA repair protein RecN [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 553 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F E K+ F+ TI+ G+ G GKS L +A+ + Sbjct: 2 LQTLAIKNF-ALIEDIKMNFSKGFTIITGETGSGKSILLDALALVLG 47 >gi|256422208|ref|YP_003122861.1| hypothetical protein Cpin_3193 [Chitinophaga pinensis DSM 2588] gi|256037116|gb|ACU60660.1| plasmid-related protein [Chitinophaga pinensis DSM 2588] Length = 674 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + I F+ F + +I +L G N GK+S EA++ LF R Sbjct: 1 MKISTLTIKGFKSFGPQETRITLRKNLAAFIGLNSAGKTSALEALKRLFGSSLAER 56 >gi|126459089|ref|YP_001055367.1| SMC domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248810|gb|ABO07901.1| SMC domain protein [Pyrobaculum calidifontis JCM 11548] Length = 346 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +E+ +RG + +FA + + G+NG GKSSL EA+ Sbjct: 3 YVKGLEVEGYRGLRKASLTDFA-GINVFVGKNGSGKSSLLEALYIAL 48 >gi|24371610|ref|NP_715652.1| DNA replication and repair protein RecF [Shewanella oneidensis MR-1] gi|51316466|sp|Q8EKT0|RECF_SHEON RecName: Full=DNA replication and repair protein recF gi|24345360|gb|AAN53097.1|AE015452_10 DNA replication and repair protein RecF [Shewanella oneidensis MR-1] Length = 360 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I FR ++ ++ ++ + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLIRLNIDSFRNI-QLAQLSPSEGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|330503409|ref|YP_004380278.1| hypothetical protein MDS_2495 [Pseudomonas mendocina NK-01] gi|328917695|gb|AEB58526.1| hypothetical protein MDS_2495 [Pseudomonas mendocina NK-01] Length = 575 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + IS+FR + + A + + G GKSS+ +AI+ +R + Sbjct: 3 RIRRLIISNFRSIQALDWVP-APGINCLIGPGDSGKSSILDAIDLCVG--ARRGGTFGDM 59 Query: 88 KKRSIKTPMPMCMAV 102 ++ P+ ++V Sbjct: 60 DFFALNVETPITISV 74 >gi|313892256|ref|ZP_07825849.1| DNA replication and repair protein RecF [Dialister microaerophilus UPII 345-E] gi|313119394|gb|EFR42593.1| DNA replication and repair protein RecF [Dialister microaerophilus UPII 345-E] Length = 356 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + R F E +IE ++TI G+NG GK++L E++ +G + R + Sbjct: 1 MKIKKFRLIQVRNF-ENIEIETDKNITIFTGKNGAGKTNLLESVNLASFGKSFRTNKDEE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|311278426|ref|YP_003940657.1| DNA repair protein RecN [Enterobacter cloacae SCF1] gi|308747621|gb|ADO47373.1| DNA repair protein RecN [Enterobacter cloacae SCF1] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|295097183|emb|CBK86273.1| DNA replication and repair protein RecN [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|227327921|ref|ZP_03831945.1| hypothetical protein PcarcW_11545 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 394 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQR---R 81 K++ EI+H G + + F + + I+ G NG GKS++ ++I ++F G + + R Sbjct: 1 MKIIFTEINHIGGIKNLT-LNFTESMNIICGPNGIGKSTILDSIGFMFSRSGSSIKKNIR 59 Query: 82 KHGDSIKKRSIK 93 + D IK Sbjct: 60 SNDDGKINLQIK 71 >gi|190341583|gb|ACE74868.1| RecN [Escherichia vulneris] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|190341541|gb|ACE74847.1| RecN [Enterobacter hormaechei ATCC 49162] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|296104286|ref|YP_003614432.1| DNA recombination and repair protein RecN [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|190341509|gb|ACE74831.1| RecN [Enterobacter cloacae] gi|295058745|gb|ADF63483.1| DNA recombination and repair protein RecN [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|190341507|gb|ACE74830.1| RecN [Enterobacter cancerogenus] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|190341503|gb|ACE74828.1| RecN [Enterobacter asburiae] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|190341501|gb|ACE74827.1| RecN [Enterobacter asburiae] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 >gi|217967931|ref|YP_002353437.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] gi|217337030|gb|ACK42823.1| DNA replication and repair protein RecF [Dictyoglomus turgidum DSM 6724] Length = 359 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+D+++ +FR + + F D + I G+N GK+++ E I +LF G + R K+ Sbjct: 1 MRLIDLKVINFRNL-KNLSLNFFD-VNIFYGENAQGKTNILEGIYFLFSGKSFRTKNEKE 58 Query: 87 IKKRSIKT 94 I + ++ Sbjct: 59 IIRWGEES 66 >gi|89069839|ref|ZP_01157174.1| recombination protein F [Oceanicola granulosus HTCC2516] gi|89044640|gb|EAR50756.1| recombination protein F [Oceanicola granulosus HTCC2516] Length = 366 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR + +E + G NG GK++L EA+ L G RR + Sbjct: 6 ITRLTLSHFRSH-KRAAVEVDARPVAIYGANGAGKTNLLEAVSILSPGRGLRRAGAAEMT 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|325661825|ref|ZP_08150447.1| DNA sulfur modification protein DndD [Lachnospiraceae bacterium 4_1_37FAA] gi|325471914|gb|EGC75130.1| DNA sulfur modification protein DndD [Lachnospiraceae bacterium 4_1_37FAA] Length = 648 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGD 85 + + + +F + EFA + ++ G NG GK++ EAI YG + K D Sbjct: 3 INRLTMHNFGVYAGTNTFEFASKKPIVLIGGMNGRGKTTFLEAILLSLYGANSIAYKESD 62 Query: 86 S 86 Sbjct: 63 Y 63 >gi|313232328|emb|CBY09437.1| unnamed protein product [Oikopleura dioica] Length = 1115 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGDS 86 K+ I + +F ++E D +T + G+NG GKS+ A+ +F G + K G Sbjct: 55 KIKKIILENFMCHR-KLELELGDRITFITGKNGSGKSATMNALTAVFGGRQSDTGKKGSV 113 Query: 87 I 87 + Sbjct: 114 M 114 >gi|257094259|ref|YP_003167900.1| ATPase-like protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046783|gb|ACV35971.1| ATPase-like protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 397 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I I +F+ + LT++ G NG GKSSL EA+E Sbjct: 1 MHIKSIAIENFKSLKNSGVVRMKP-LTVLIGNNGSGKSSLLEAVE 44 >gi|241782309|ref|XP_002400604.1| paramyosin, putative [Ixodes scapularis] gi|215508579|gb|EEC18033.1| paramyosin, putative [Ixodes scapularis] Length = 1024 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +S ++ I + +++ +F T F+DH + G+NG GKS++ ++ G Sbjct: 30 SSSQTKQSIGIIESVQLRNFMCHT-KLDFSFSDHTNFIIGRNGSGKSAILTSLIIGLGGK 88 Query: 78 TQRRKHGDSIKKR 90 G S+K Sbjct: 89 ANTASRGTSVKNL 101 >gi|67809989|gb|AAY81983.1| recombinase F [Wolbachia pipientis] Length = 320 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR + + ++ D ++ G+NG GK+++ EAI L ++ I Sbjct: 5 YIKKLKLHNFRSHSNFE-LDSDDSSVVITGKNGIGKTNILEAISLLAKSNGMKKAKASEI 63 Query: 88 KKR 90 + R Sbjct: 64 QNR 66 >gi|317054735|ref|YP_004103202.1| DNA replication and repair protein RecF [Ruminococcus albus 7] gi|315447004|gb|ADU20568.1| DNA replication and repair protein RecF [Ruminococcus albus 7] Length = 376 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + D+ ++ F+ I+ I+ + + I G+N GK++L EAI + R Sbjct: 1 MFITDLSVNGFKNLKNIE-IKPHEKINIFCGKNAQGKTNLIEAIWLCSGARSFRSTKDRR 59 Query: 87 IKKRSIKTPMPMCMA 101 + + M +C++ Sbjct: 60 MI-GDDEQVMEICLS 73 >gi|302784929|ref|XP_002974236.1| hypothetical protein SELMODRAFT_174036 [Selaginella moellendorffii] gi|300157834|gb|EFJ24458.1| hypothetical protein SELMODRAFT_174036 [Selaginella moellendorffii] Length = 1028 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 + I + +F +++I L +V G NG GKSSL A+ G Q G Sbjct: 5 ITQIRVHNFMTYSDITSKP-GPRLNLVIGPNGTGKSSLVCALAIGLGGEPQLLGRAGHIG 63 Query: 85 DSIKK 89 D +K+ Sbjct: 64 DYVKR 68 >gi|86156433|ref|YP_463218.1| DNA replication and repair protein RecF [Anaeromyxobacter dehalogenans 2CP-C] gi|97180309|sp|Q2ILU8|RECF_ANADE RecName: Full=DNA replication and repair protein recF gi|85772944|gb|ABC79781.1| DNA replication and repair protein RecF [Anaeromyxobacter dehalogenans 2CP-C] Length = 372 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KLL + + FR ++ + T++ G+NG GK++L EAI +L R Sbjct: 1 MKLLSLHVQDFRNLAAVELAP-SPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVR 56 >gi|328865846|gb|EGG14232.1| putative non-transporter ABC protein [Dictyostelium fasciculatum] Length = 1085 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +IE++ F T + +D + ++ GQ G GKSSL E++ W YG T RK Sbjct: 432 VSIKEIEVTDFCSITGPLTLSLSDYRMLMIRGQMGSGKSSLFESMVWAIYGNTSPRKQAS 491 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQLK 110 S SIK + CK ++ Sbjct: 492 S--SSSIKGDEVINDRAKMCKVTVR 514 >gi|323187168|gb|EFZ72482.1| hypothetical protein ECRN5871_4551 [Escherichia coli RN587/1] Length = 578 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ +EI +FR + + + L + G GK+++ +AI+ Sbjct: 1 MVRVCKVEIRNFRSIRLLT-WQPSPGLNCLIGPGDSGKTTILDAIDLCLGARRNVSFSDT 59 Query: 86 SIKKRSIKTPMPMCMAV 102 + P+ + + + Sbjct: 60 DFFGLDVSQPISITLTL 76 >gi|312897425|ref|ZP_07756849.1| putative recombination protein F [Megasphaera micronuciformis F0359] gi|310621486|gb|EFQ05022.1| putative recombination protein F [Megasphaera micronuciformis F0359] Length = 370 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + + R + E I F + ++ G NG GK++L EA+ G + R Sbjct: 1 MNISRIRLLNIRNY-EEADISFPATVIVLYGNNGQGKTNLLEALYTGCIGKSYRGVTDVD 59 Query: 87 IKKRS 91 + ++S Sbjct: 60 LLRKS 64 >gi|307637061|gb|ADN79511.1| hypothetical protein hp908_0382 [Helicobacter pylori 908] gi|325995652|gb|ADZ51057.1| hypothetical protein hp2018_03741 [Helicobacter pylori 2018] gi|325997248|gb|ADZ49456.1| hypothetical protein hp2017_03721 [Helicobacter pylori 2017] Length = 137 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + I +F+ F + +I+ L I+ GQN GKS+L EA+ +L Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGQNNAGKSNLLEALYYLVGKSMH 51 >gi|222147250|ref|YP_002548207.1| recombination protein F [Agrobacterium vitis S4] gi|259563353|sp|B9JZ91|RECF_AGRVS RecName: Full=DNA replication and repair protein recF gi|221734240|gb|ACM35203.1| DNA replication and repair protein [Agrobacterium vitis S4] Length = 374 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++++ FR + + ++ G NG GK++L EA+ +L G RR + Sbjct: 7 INRLQLTDFRNYGS-ASLRLDGRHVVLTGNNGSGKTNLMEAVSFLSPGRGLRRAVLSDVA 65 Query: 89 KRS 91 + Sbjct: 66 RAG 68 >gi|242277800|ref|YP_002989929.1| hypothetical protein Desal_0323 [Desulfovibrio salexigens DSM 2638] gi|242120694|gb|ACS78390.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638] Length = 629 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 32 IEISHFRGFTEIQKI---EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+I+ + F + + EF D + + G NG GKS+++E + ++ G Sbjct: 6 IKINRLQIFANGESVYDQEFHDGINAICGDNGSGKSTVAELLLYVLGG 53 >gi|241997524|ref|XP_002433411.1| SMC protein, putative [Ixodes scapularis] gi|215490834|gb|EEC00475.1| SMC protein, putative [Ixodes scapularis] Length = 1258 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 29 LLDIEISHFRGF----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L ++I R F Q + F LT++ G NG GK+++ E + G + Sbjct: 16 LEKLQIQGIRSFGPTDANKQMMSFFSPLTLILGSNGTGKTTIIECLRNATTGDLPPGQGK 75 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQ 108 I + + ++ + K+Q Sbjct: 76 VFIHDPKLNHETEVNASI-KLKFQ 98 >gi|183219430|ref|YP_001837426.1| DNA replication and repair protein RecF [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909576|ref|YP_001961131.1| recombinational DNA repair ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226737810|sp|B0S909|RECF_LEPBA RecName: Full=DNA replication and repair protein recF gi|226737811|sp|B0SK33|RECF_LEPBP RecName: Full=DNA replication and repair protein recF gi|167774252|gb|ABZ92553.1| Recombinational DNA repair ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777852|gb|ABZ96150.1| DNA replication and repair protein RecF [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 367 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I I +FR E ++ F L G NG GK++L E+I L Y + R + Sbjct: 1 MFLKKIYIKNFRNH-EETQLTFKSRLVFFIGNNGEGKTNLLESISLLSYLKSFRESDQNQ 59 Query: 87 IKK 89 + + Sbjct: 60 LLR 62 >gi|88812326|ref|ZP_01127576.1| DNA repair protein RecN [Nitrococcus mobilis Nb-231] gi|88790333|gb|EAR21450.1| DNA repair protein RecN [Nitrococcus mobilis Nb-231] Length = 553 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I I +F + +I F +T + G+ G GKS L +A+ Sbjct: 2 LRRIHIRNF-AIVDTVEIAFEPGMTTLTGETGAGKSILLDALGTCLGERADSSV 54 >gi|118580293|ref|YP_901543.1| hypothetical protein Ppro_1874 [Pelobacter propionicus DSM 2379] gi|118503003|gb|ABK99485.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379] Length = 703 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I +FR F ++ F + + G+NG GK++L ++ L R Sbjct: 1 MHISCLSIRNFRNFKS-AQLHFRKGINTIIGENGSGKTNLFFSLRILIDNTLPR 53 >gi|330900979|gb|EGH32398.1| ATPase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 585 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + +I F+ F K+E +T+V G NG GKSS+ A Sbjct: 24 IHEINFPKFKSFAPGLKLEIKFPVTVVVGPNGGGKSSILHA 64 >gi|331086442|ref|ZP_08335522.1| hypothetical protein HMPREF0987_01825 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406208|gb|EGG85731.1| hypothetical protein HMPREF0987_01825 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 424 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I I +F+ F E +I ++LTI+ G N GKS+ I ++ Sbjct: 1 MKIKYIHIKNFKSFGE--QIINLENLTILLGANASGKSNTVSIIRFV 45 >gi|328864918|gb|EGG13304.1| structural maintenance of chromosome protein [Dictyostelium fasciculatum] Length = 1153 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + I+F ++ ++G+NG GKS+L A+ + G + Sbjct: 113 IESISVENFMCHRHFE-IKFGPNVNFISGENGSGKSALLVALIICLGAKSGTTNRGHKLA 171 Query: 89 KR 90 Sbjct: 172 DL 173 >gi|295104269|emb|CBL01813.1| SMC proteins Flexible Hinge Domain. [Faecalibacterium prausnitzii SL3/3] Length = 1127 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I + ++ F+ + IE D + + G+NG GKS++ +A++ + G T R + Sbjct: 3 KLKKILLINWLYFS-KELIEVGD-INFLTGKNGAGKSTVIDALQIVLLGETNARNFNQAA 60 Query: 88 KKRSIKT 94 ++S +T Sbjct: 61 NEKSQRT 67 >gi|291536575|emb|CBL09687.1| Predicted ATP-dependent endonuclease of the OLD family [Roseburia intestinalis M50/1] Length = 627 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHG 84 KL I I +F+ E+ KI+ ++ I+ GQN GK+++ EAI F Y + G Sbjct: 1 MKLTGIHIKNFKAIHEM-KIDSIENALILVGQNNTGKTTILEAIRAAFGDYHISAEDFDG 59 Query: 85 D 85 D Sbjct: 60 D 60 >gi|229590958|ref|YP_002873077.1| exonuclease [Pseudomonas fluorescens SBW25] gi|229362824|emb|CAY49734.1| exonuclease [Pseudomonas fluorescens SBW25] Length = 1212 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPR 104 GD+ + + + + PR Sbjct: 61 --LGDTGQAKMPDADSDISIGDPR 82 >gi|260587667|ref|ZP_05853580.1| putative exonuclease SbcC [Blautia hansenii DSM 20583] gi|260541932|gb|EEX22501.1| putative exonuclease SbcC [Blautia hansenii DSM 20583] Length = 1076 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +++ F E+Q+I+F L + G G GK+S+ + + YG T R Sbjct: 1 MKMKGLNSFLEVQEIDFEKLTSQGLFGIFGPTGSGKTSILDGMTLALYGTTSRN 54 >gi|187939686|gb|ACD38829.1| hypothetical protein PACL_0581 [Pseudomonas aeruginosa] gi|187939764|gb|ACD38905.1| hypothetical protein PACL_0647 [Pseudomonas aeruginosa] Length = 581 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 ++ +EI++F+G ++ + + +V G NG GKSSL + + F G +R D Sbjct: 1 MRITKLEITNFQGLR-HAALDVSAPVLLVAGHNGAGKSSLLDGVAMAFNGQPRRVSLKKD 59 >gi|147860939|emb|CAN82944.1| hypothetical protein VITISV_027872 [Vitis vinifera] Length = 158 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +IE+ +F F ++ K + L +V G NG GKSSL AI G Q SI Sbjct: 23 ITEIELHNFMTFNDL-KCKPGSRLNLVIGPNGSGKSSLVCAIALGLGGDPQLLGRASSI 80 >gi|172059071|ref|YP_001806723.1| hypothetical protein BamMC406_0005 [Burkholderia ambifaria MC40-6] gi|171991588|gb|ACB62507.1| hypothetical protein BamMC406_0005 [Burkholderia ambifaria MC40-6] Length = 672 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +E+ ++ + +++F ++ +++G+NG GK+SL AI+ LF G Sbjct: 1 MRFVALEVEDIFAYSGLSRVDFDACTDTRNIVVISGRNGAGKTSLLNAIKLLFLGAENDS 60 Query: 82 KH 83 Sbjct: 61 LR 62 >gi|108758074|ref|YP_633676.1| hypothetical protein MXAN_5535 [Myxococcus xanthus DK 1622] gi|108461954|gb|ABF87139.1| hypothetical protein MXAN_5535 [Myxococcus xanthus DK 1622] Length = 646 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +FRGF F + ++ G N GK++L AI + Y+ Sbjct: 2 LTKVIVENFRGFHSFTA-NFQE-TNVLVGPNNAGKTTLMSAIRFACAAYS 49 >gi|313114300|ref|ZP_07799836.1| BPG-independent PGAM [Faecalibacterium cf. prausnitzii KLE1255] gi|310623388|gb|EFQ06807.1| BPG-independent PGAM [Faecalibacterium cf. prausnitzii KLE1255] Length = 1127 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I + ++ F+ + IE D + + G+NG GKS++ +A++ + G T R + Sbjct: 3 KLKKILLINWLYFS-KELIEVGD-INFLTGKNGAGKSTVIDALQIVLLGETNARNFNQAA 60 Query: 88 KKRSIKT 94 ++S +T Sbjct: 61 NEKSQRT 67 >gi|260774983|ref|ZP_05883883.1| DNA recombination and repair protein RecF [Vibrio coralliilyticus ATCC BAA-450] gi|260609073|gb|EEX35232.1| DNA recombination and repair protein RecF [Vibrio coralliilyticus ATCC BAA-450] Length = 360 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR IE + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IELSAGFNFLIGPNGSGKTSVLEAVYLLGHGRSFKS 54 >gi|257486745|ref|ZP_05640786.1| SMC domain protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010215|gb|EGH90271.1| SMC domain protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 650 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHGDS 86 L + + F+ F I+F LT + G NG GK++ +A+ QRR Sbjct: 3 LKQMRVCGFQSFGAAPVIIDF-RKLTFLIGPNGSGKTATLQALCRLFSIDPNQRRLRKSD 61 Query: 87 IKKRSIKTPMP 97 + P Sbjct: 62 FFVAHDEEDRP 72 >gi|187932364|ref|YP_001886586.1| DNA repair protein RecN [Clostridium botulinum B str. Eklund 17B] gi|187720517|gb|ACD21738.1| DNA repair protein RecN [Clostridium botulinum B str. Eklund 17B] Length = 562 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I +F + + F + I++G+ G GKS L +AI+++ G + Sbjct: 2 LIQLNIKNF-ALIQEITMNFNEGFNILSGETGAGKSILIDAIDYVLGGKFSKSL 54 >gi|91228346|ref|ZP_01262274.1| recombination protein F [Vibrio alginolyticus 12G01] gi|269965276|ref|ZP_06179397.1| recF protein [Vibrio alginolyticus 40B] gi|91188106|gb|EAS74410.1| recombination protein F [Vibrio alginolyticus 12G01] gi|269830077|gb|EEZ84305.1| recF protein [Vibrio alginolyticus 40B] Length = 359 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR IE + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IELSAGFNFLIGPNGSGKTSVLEAVYLLGHGRSFKS 54 >gi|254230347|ref|ZP_04923733.1| Recombinational DNA repair ATPase [Vibrio sp. Ex25] gi|262392781|ref|YP_003284635.1| DNA recombination and repair protein RecF [Vibrio sp. Ex25] gi|151937139|gb|EDN56011.1| Recombinational DNA repair ATPase [Vibrio sp. Ex25] gi|262336375|gb|ACY50170.1| DNA recombination and repair protein RecF [Vibrio sp. Ex25] Length = 359 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR IE + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IELSAGFNFLIGPNGSGKTSVLEAVYLLGHGRSFKS 54 >gi|227358162|ref|ZP_03842503.1| exonuclease [Proteus mirabilis ATCC 29906] gi|227161498|gb|EEI46535.1| exonuclease [Proteus mirabilis ATCC 29906] Length = 1241 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI F ++ L + G G GK++L +AI Y R Sbjct: 1 MKILSLRFKNINSLKGEWKINFDQEPFVSNGLFAITGPTGAGKTTLLDAISLALY---HR 57 Query: 81 RKHGDSIKKRSIK 93 D + + + Sbjct: 58 TPRLDKVTQSQNE 70 >gi|209694864|ref|YP_002262792.1| nuclease sbcCD subunit C [Aliivibrio salmonicida LFI1238] gi|208008815|emb|CAQ79018.1| nuclease sbcCD subunit C [Aliivibrio salmonicida LFI1238] Length = 1226 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + S+ KI+F+ + L + G G GK+++ +AI Y T R Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 >gi|197335299|ref|YP_002155964.1| exonuclease SbcC [Vibrio fischeri MJ11] gi|197316789|gb|ACH66236.1| exonuclease SbcC [Vibrio fischeri MJ11] Length = 1226 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + S+ KI+F+ + L + G G GK+++ +AI Y T R Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 >gi|197283964|ref|YP_002149836.1| exonuclease [Proteus mirabilis HI4320] gi|194681451|emb|CAR40289.1| exonuclease [Proteus mirabilis HI4320] Length = 1241 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI F ++ L + G G GK++L +AI Y R Sbjct: 1 MKILSLRFKNINSLKGEWKINFDQEPFVSNGLFAITGPTGAGKTTLLDAISLALY---HR 57 Query: 81 RKHGDSIKKRSIK 93 D + + + Sbjct: 58 TPRLDKVTQSQNE 70 >gi|59711775|ref|YP_204551.1| exonuclease, dsDNA, ATP-dependent [Vibrio fischeri ES114] gi|59479876|gb|AAW85663.1| exonuclease, dsDNA, ATP-dependent [Vibrio fischeri ES114] Length = 1226 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + S+ KI+F+ + L + G G GK+++ +AI Y T R Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 >gi|116491231|ref|YP_810775.1| DNA repair ATPase [Oenococcus oeni PSU-1] gi|290890774|ref|ZP_06553841.1| hypothetical protein AWRIB429_1231 [Oenococcus oeni AWRIB429] gi|116091956|gb|ABJ57110.1| DNA replication and repair protein RecN [Oenococcus oeni PSU-1] gi|290479546|gb|EFD88203.1| hypothetical protein AWRIB429_1231 [Oenococcus oeni AWRIB429] Length = 551 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F + +I+F LT++ G+ G GKS + +A+ L + S+ Sbjct: 2 LNNLSIKNFAIIND-AQIDFDKGLTVMTGETGAGKSIIIDALSLLVGERSY-----SSMI 55 Query: 89 KRSIK 93 ++ K Sbjct: 56 RKGEK 60 >gi|331018295|gb|EGH98351.1| exonuclease SbcC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|331012281|gb|EGH92337.1| exonuclease SbcC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330989222|gb|EGH87325.1| exonuclease SbcC [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330975139|gb|EGH75205.1| exonuclease SbcC [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 1169 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330973660|gb|EGH73726.1| exonuclease SbcC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330963352|gb|EGH63612.1| exonuclease SbcC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330952760|gb|EGH53020.1| exonuclease SbcC [Pseudomonas syringae Cit 7] Length = 299 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330889250|gb|EGH21911.1| exonuclease SbcC [Pseudomonas syringae pv. mori str. 301020] Length = 878 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330883494|gb|EGH17643.1| exonuclease SbcC [Pseudomonas syringae pv. glycinea str. race 4] Length = 90 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330878852|gb|EGH13001.1| exonuclease SbcC [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|330866184|gb|EGH00893.1| exonuclease SbcC [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 1055 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|320329706|gb|EFW85695.1| exonuclease SbcC [Pseudomonas syringae pv. glycinea str. race 4] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|320323263|gb|EFW79351.1| exonuclease SbcC [Pseudomonas syringae pv. glycinea str. B076] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|302188500|ref|ZP_07265173.1| exonuclease SbcC [Pseudomonas syringae pv. syringae 642] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|298488101|ref|ZP_07006138.1| Exonuclease SbcC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157380|gb|EFH98463.1| Exonuclease SbcC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|289626124|ref|ZP_06459078.1| exonuclease SbcC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650359|ref|ZP_06481702.1| exonuclease SbcC [Pseudomonas syringae pv. aesculi str. 2250] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|213968788|ref|ZP_03396929.1| exonuclease SbcC [Pseudomonas syringae pv. tomato T1] gi|301385762|ref|ZP_07234180.1| exonuclease SbcC [Pseudomonas syringae pv. tomato Max13] gi|302061834|ref|ZP_07253375.1| exonuclease SbcC [Pseudomonas syringae pv. tomato K40] gi|302134230|ref|ZP_07260220.1| exonuclease SbcC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926391|gb|EEB59945.1| exonuclease SbcC [Pseudomonas syringae pv. tomato T1] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|170767070|ref|ZP_02901523.1| DNA replication and repair protein RecF [Escherichia albertii TW07627] gi|170124508|gb|EDS93439.1| DNA replication and repair protein RecF [Escherichia albertii TW07627] Length = 357 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQVGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|160944806|ref|ZP_02092033.1| hypothetical protein FAEPRAM212_02322 [Faecalibacterium prausnitzii M21/2] gi|158443990|gb|EDP20994.1| hypothetical protein FAEPRAM212_02322 [Faecalibacterium prausnitzii M21/2] Length = 1127 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I + ++ F+ + IE D + + G+NG GKS++ +A++ + G T R + Sbjct: 3 KLKKILLINWLYFS-KELIEVGD-INFLTGKNGAGKSTVIDALQIVLLGETNARNFNQAA 60 Query: 88 KKRSIKT 94 ++S +T Sbjct: 61 NEKSQRT 67 >gi|28870921|ref|NP_793540.1| exonuclease SbcC [Pseudomonas syringae pv. tomato str. DC3000] gi|28854170|gb|AAO57235.1| exonuclease SbcC [Pseudomonas syringae pv. tomato str. DC3000] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|71734447|ref|YP_275718.1| exonuclease SbcC [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555000|gb|AAZ34211.1| exonuclease SbcC [Pseudomonas syringae pv. phaseolicola 1448A] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|66044959|ref|YP_234800.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a] gi|63255666|gb|AAY36762.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a] Length = 1214 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|328953426|ref|YP_004370760.1| DNA repair ATPase [Desulfobacca acetoxidans DSM 11109] gi|328453750|gb|AEB09579.1| DNA repair ATPase [Desulfobacca acetoxidans DSM 11109] Length = 884 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L S K ++ ++ + G+ + +I+F++HL V G G GKS+L E I + Sbjct: 250 LNSDVPEKYYSRIESVKSTG--GYLDGLEIDFSEHLNAVIGGRGTGKSTLLECIRYAL 305 >gi|300814948|ref|ZP_07095176.1| DNA repair protein RecN [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510918|gb|EFK38190.1| DNA repair protein RecN [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 555 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I ++ E KI F L ++ G+ G GKS + +A+ + G + Sbjct: 2 LLELNIENY-AIIEDMKINFQKGLNVITGETGSGKSIIIDALGMVLGGRANKDVIKAGKD 60 Query: 89 KRSIK 93 I+ Sbjct: 61 FCHIE 65 >gi|284050282|ref|ZP_06380492.1| ATPase [Arthrospira platensis str. Paraca] gi|291566863|dbj|BAI89135.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 369 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 8/51 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAI 70 K+ I+I +F+ F +++ I F +++ ++ G NG GK++L +AI Sbjct: 1 MKVESIKIENFKRFQDLE-ISFKNNILDEVSDRYLILGDNGTGKTTLLQAI 50 >gi|253578944|ref|ZP_04856215.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849887|gb|EES77846.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 1275 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSL-SEAIEWLFYGYTQRRKH 83 +F+ + I + ++R + E + +FAD +NG NG GKSSL +AI + T+ + Sbjct: 409 VFRPISIAVRNYRNYKEE-RFDFADISFCTINGVNGAGKSSLFMDAIVDCLFEETREGDN 467 Query: 84 GDSIK 88 I+ Sbjct: 468 KAWIR 472 >gi|229526956|ref|ZP_04416353.1| hypothetical protein VCG_000024 [Vibrio cholerae 12129(1)] gi|229335568|gb|EEO01048.1| hypothetical protein VCG_000024 [Vibrio cholerae 12129(1)] Length = 630 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI---EWLFYGYTQRRKH 83 ++ I + +F+ F +I I D IV G+N GKSS+ EAI E + Y + Sbjct: 3 LRINKISLKNFKTFKDITIIPNTD-FNIVIGENSAGKSSIFEAIHLWEKCYKTYILASRK 61 Query: 84 GDSIKKRS 91 G K+S Sbjct: 62 GFYKVKKS 69 >gi|297588431|ref|ZP_06947074.1| exonuclease SbcC family protein [Finegoldia magna ATCC 53516] gi|297573804|gb|EFH92525.1| exonuclease SbcC family protein [Finegoldia magna ATCC 53516] Length = 527 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + DI +++F+ + E E ++ + ++ G + GK++L A+ W+ + Sbjct: 1 MYITDIYLTNFQSY-EQGHFELSEKVNLITGASDSGKTALIRALSWVLF 48 >gi|209527433|ref|ZP_03275938.1| AAA ATPase [Arthrospira maxima CS-328] gi|209492106|gb|EDZ92456.1| AAA ATPase [Arthrospira maxima CS-328] Length = 378 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 8/51 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAI 70 K+ I+I +F+ F +++ I F +++ ++ G NG GK++L +AI Sbjct: 10 MKVESIKIENFKRFQDLE-ISFKNNILDEVSDRYLILGDNGTGKTTLLQAI 59 >gi|326385841|ref|ZP_08207469.1| ATP-dependent OLD family endonuclease [Novosphingobium nitrogenifigens DSM 19370] gi|326209678|gb|EGD60467.1| ATP-dependent OLD family endonuclease [Novosphingobium nitrogenifigens DSM 19370] Length = 255 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL I ++R + E TI+ G N GK+++ +A++ Sbjct: 1 MKLKTAHIQNYRSIRDTGVFEIEAGKTILVGPNEAGKTAVLQALQ 45 >gi|291524427|emb|CBK90014.1| Predicted ATP-binding protein involved in virulence [Eubacterium rectale DSM 17629] gi|291527555|emb|CBK93141.1| Predicted ATP-binding protein involved in virulence [Eubacterium rectale M104/1] Length = 457 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 FK+ ++ + ++RGF + +K + + G+NG GK+S+ EA + Y Sbjct: 4 FKIQELGLRNYRGF-DNKKFVLNPRMNVFAGKNGSGKTSVLEAANVMLGAYLAA 56 >gi|283786235|ref|YP_003366100.1| DNA repair protein [Citrobacter rodentium ICC168] gi|282949689|emb|CBG89308.1| DNA repair protein [Citrobacter rodentium ICC168] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|239502688|ref|ZP_04661998.1| RecF/RecN/SMC domain-containing protein [Acinetobacter baumannii AB900] Length = 646 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 9/76 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQN---------GYGKSSLSEAIEWLFYGY 77 K+L +F +E L ++ G+N G GKSSL + I W YG Sbjct: 1 MKILKATFQNFLTLSEACLELDDRGLLLITGKNDDDTSANSNGAGKSSLVDGICWALYGT 60 Query: 78 TQRRKHGDSIKKRSIK 93 T R GD + + K Sbjct: 61 TARDVTGDDVVNETAK 76 >gi|289807103|ref|ZP_06537732.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 183 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|213855294|ref|ZP_03383534.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 531 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|213619279|ref|ZP_03373105.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 165 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|213582900|ref|ZP_03364726.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 488 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|213052725|ref|ZP_03345603.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424856|ref|ZP_03357606.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213647048|ref|ZP_03377101.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 569 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|213024315|ref|ZP_03338762.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 169 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|205353720|ref|YP_002227521.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273501|emb|CAR38478.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628826|gb|EGE35169.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|183983575|ref|YP_001851866.1| ATP-dependent OLD family endonuclease [Mycobacterium marinum M] gi|183176901|gb|ACC42011.1| ATP-dependent endonuclease (old family) [Mycobacterium marinum M] Length = 532 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I ++R F + ++EF+D L I+ G N GKS++ EAI Sbjct: 2 IKKITIKNYRIF-QNFELEFSDRLNILVGDNDIGKSTVIEAINLALT 47 >gi|204929454|ref|ZP_03220528.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321173|gb|EDZ06373.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|197249669|ref|YP_002147619.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213372|gb|ACH50769.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|168234207|ref|ZP_02659265.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472698|ref|ZP_03078682.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459062|gb|EDX47901.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331829|gb|EDZ18593.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|198241855|ref|YP_002216692.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936371|gb|ACH73704.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624449|gb|EGE30794.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|167553515|ref|ZP_02347264.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322061|gb|EDZ09900.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|161502220|ref|YP_001569332.1| recombination and repair protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863567|gb|ABX20190.1| hypothetical protein SARI_00244 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|62181254|ref|YP_217671.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128887|gb|AAX66590.1| recombination and DNA repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715740|gb|EFZ07311.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|78221231|ref|YP_382978.1| recombination protein F [Geobacter metallireducens GS-15] gi|97180732|sp|Q39ZS1|RECF_GEOMG RecName: Full=DNA replication and repair protein recF gi|78192486|gb|ABB30253.1| DNA replication and repair protein RecF [Geobacter metallireducens GS-15] Length = 365 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+IS FR + I F +++G NG GK+S+ EAI +L R Sbjct: 1 MFVTKIQISSFRNIAAAE-IRFDRRFNVLHGANGQGKTSVLEAI-YLLGTMKSFRL 54 >gi|16765999|ref|NP_461614.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414649|ref|YP_151724.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615614|ref|YP_001589579.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167992464|ref|ZP_02573562.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239454|ref|ZP_02664512.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244707|ref|ZP_02669639.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262143|ref|ZP_02684116.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464143|ref|ZP_02698060.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823039|ref|ZP_02835039.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443554|ref|YP_002041945.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449811|ref|YP_002046687.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194737809|ref|YP_002115693.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264124|ref|ZP_03164198.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363576|ref|YP_002143213.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386918|ref|ZP_03213530.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207858031|ref|YP_002244682.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584535|ref|YP_002638333.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238909526|ref|ZP_04653363.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16421231|gb|AAL21573.1| protein used in recombination and DNA repair [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128906|gb|AAV78412.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364978|gb|ABX68746.1| hypothetical protein SPAB_03397 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402217|gb|ACF62439.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408115|gb|ACF68334.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713311|gb|ACF92532.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633405|gb|EDX51819.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095053|emb|CAR60599.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242379|gb|EDY24999.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197287860|gb|EDY27248.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199604016|gb|EDZ02561.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205329265|gb|EDZ16029.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336458|gb|EDZ23222.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340644|gb|EDZ27408.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349004|gb|EDZ35635.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709834|emb|CAR34186.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469062|gb|ACN46892.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247874|emb|CBG25704.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994827|gb|ACY89712.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159243|emb|CBW18758.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913706|dbj|BAJ37680.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087161|emb|CBY96928.1| DNA repair protein recN Recombination protein N [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223475|gb|EFX48540.1| DNA repair protein RecN [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614469|gb|EFY11400.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621466|gb|EFY18319.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624327|gb|EFY21160.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629374|gb|EFY26152.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633614|gb|EFY30356.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638343|gb|EFY35041.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639781|gb|EFY36464.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647358|gb|EFY43854.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650473|gb|EFY46883.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656034|gb|EFY52334.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661428|gb|EFY57653.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662628|gb|EFY58836.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667001|gb|EFY63176.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671370|gb|EFY67493.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677623|gb|EFY73686.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681551|gb|EFY77581.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683951|gb|EFY79961.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323131027|gb|ADX18457.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195520|gb|EFZ80698.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197893|gb|EFZ83016.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203071|gb|EFZ88103.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205312|gb|EFZ90287.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210538|gb|EFZ95422.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218181|gb|EGA02893.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221553|gb|EGA05966.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223773|gb|EGA08078.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230944|gb|EGA15062.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234704|gb|EGA18790.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238743|gb|EGA22793.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241443|gb|EGA25474.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246860|gb|EGA30827.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253259|gb|EGA37089.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257055|gb|EGA40764.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260472|gb|EGA44083.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264471|gb|EGA47977.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269606|gb|EGA53059.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989608|gb|AEF08591.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|16761536|ref|NP_457153.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143007|ref|NP_806349.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|289824181|ref|ZP_06543776.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25300521|pir||AG0834 DNA repair protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503837|emb|CAD05862.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138640|gb|AAO70209.1| DNA repair protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 553 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|145638187|ref|ZP_01793797.1| recombination protein F [Haemophilus influenzae PittII] gi|145272516|gb|EDK12423.1| recombination protein F [Haemophilus influenzae PittII] gi|309751343|gb|ADO81327.1| DNA replication and repair protein RecF [Haemophilus influenzae R2866] Length = 359 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR T + F + G NG GK+SL EAI +L +G + + + Sbjct: 1 MAISRLLVEKFRNLTA-VDLHFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNR 59 Query: 87 IKKRSIKTP 95 I S P Sbjct: 60 II--SYDEP 66 >gi|329121617|ref|ZP_08250238.1| recombination protein F [Dialister micraerophilus DSM 19965] gi|327468772|gb|EGF14249.1| recombination protein F [Dialister micraerophilus DSM 19965] Length = 356 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + R F E +IE ++TI G+NG GK++L E++ +G + R + Sbjct: 1 MKIKKFRLIQVRNF-ENIEIETDKNITIFTGKNGAGKTNLLESVNLASFGKSFRTNKDEE 59 Query: 87 IKK 89 + K Sbjct: 60 LIK 62 >gi|302392479|ref|YP_003828299.1| DNA repair protein RecN [Acetohalobium arabaticum DSM 5501] gi|302204556|gb|ADL13234.1| DNA repair protein RecN [Acetohalobium arabaticum DSM 5501] Length = 581 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F E +I+F +L I+ G+ G GKS + +A++ L G R D I+ Sbjct: 2 LLNLSIYNF-ALIEELQIDFTGNLNIITGETGAGKSIIVKALQMLLGG----RASTDYIR 56 Query: 89 KRSIKTPMPMCMAV 102 K + ++ Sbjct: 57 SGQKKAVIEANCSI 70 >gi|296170185|ref|ZP_06851779.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895137|gb|EFG74854.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 873 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + IEF D + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLILTNYRGIAHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|257464818|ref|ZP_05629189.1| recombination protein F [Actinobacillus minor 202] gi|257450478|gb|EEV24521.1| recombination protein F [Actinobacillus minor 202] Length = 361 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + +FR + + + G NG GK+SL E+I +L +G + + Sbjct: 1 MPLSRLIVQNFRNLQA-VDLTLSPQFNFIIGANGSGKTSLLESIFYLGHGRSFKS 54 >gi|240950077|ref|ZP_04754379.1| recombination protein F [Actinobacillus minor NM305] gi|240295452|gb|EER46207.1| recombination protein F [Actinobacillus minor NM305] Length = 361 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + +FR + + + G NG GK+SL E+I +L +G + + Sbjct: 1 MPLSRLIVQNFRNLQA-VDLTLSPQFNFIIGANGSGKTSLLESIFYLGHGRSFKS 54 >gi|291296557|ref|YP_003507955.1| SMC domain-containing protein [Meiothermus ruber DSM 1279] gi|290471516|gb|ADD28935.1| SMC domain protein [Meiothermus ruber DSM 1279] Length = 380 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 11/75 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYT-----QRRK 82 L + + +++ K++ L + G NG GKS+L +A+ ++ + R+ Sbjct: 2 LTRLLVRNYKSLG---KVDLELGKLAVFVGPNGSGKSNLLDALRFVSDALSLNLDYALRE 58 Query: 83 HG--DSIKKRSIKTP 95 G + +++RS P Sbjct: 59 RGGINEVRRRSSGRP 73 >gi|283796960|ref|ZP_06346113.1| conserved hypothetical protein [Clostridium sp. M62/1] gi|291075372|gb|EFE12736.1| conserved hypothetical protein [Clostridium sp. M62/1] Length = 624 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + LD+ I F F + + F D L IV G+N GKS++ I + +G ++R Sbjct: 1 MRFLDLYIKGFGKFHD-TFLSFEDGLNIVYGKNEAGKSTIHTFIRGMLFGIERQRGR 56 >gi|220930854|ref|YP_002507762.1| DNA replication and repair protein RecF [Halothermothrix orenii H 168] gi|254790480|sp|B8CZN7|RECF_HALOH RecName: Full=DNA replication and repair protein recF gi|219992164|gb|ACL68767.1| DNA replication and repair protein RecF [Halothermothrix orenii H 168] Length = 375 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + FR TE I+ + L + G NG GK++ EA+ + + R Sbjct: 1 MYIDRIYLKDFRNLTENL-IKLDNRLNVFVGLNGQGKTNFLEAVYLMGTASSHRTNADRE 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIRWNQD 66 >gi|295089867|emb|CBK75974.1| hypothetical protein [Clostridium cf. saccharolyticum K10] Length = 624 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + LD+ I F F + + F D L IV G+N GKS++ I + +G ++R Sbjct: 1 MRFLDLYIKGFGKFHD-TFLSFEDGLNIVYGKNEAGKSTIHTFIRGMLFGIERQRGR 56 >gi|90425031|ref|YP_533401.1| SMC protein-like [Rhodopseudomonas palustris BisB18] gi|90107045|gb|ABD89082.1| SMC protein-like [Rhodopseudomonas palustris BisB18] Length = 695 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 27 FKLLDIEISHFRGF---TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +I I +FR F + + LT + G+N GK+++ +A+ + Q Sbjct: 1 MYISEIRIENFRLFGVGNDTFVLRLKPGLTALVGENDGGKTAVIDALRLVLGTRDQELIR 60 >gi|326470524|gb|EGD94533.1| DNA repair protein Rad18 [Trichophyton tonsurans CBS 112818] Length = 1079 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 88 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 146 >gi|319956726|ref|YP_004167989.1| ATP-binding protein [Nitratifractor salsuginis DSM 16511] gi|319419130|gb|ADV46240.1| ATP-binding protein [Nitratifractor salsuginis DSM 16511] Length = 340 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + +F F +I F L +V G+NG GKS L + + + R + D+ Sbjct: 2 ICELGLENFTIFRGRHRIGFVPGLNVVIGENGSGKSHLLK-LAYTLATAGTRSRFADT 58 >gi|282882129|ref|ZP_06290770.1| DNA repair protein RecN [Peptoniphilus lacrimalis 315-B] gi|281298159|gb|EFA90614.1| DNA repair protein RecN [Peptoniphilus lacrimalis 315-B] Length = 555 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I ++ E KI F L ++ G+ G GKS + +A+ + G + Sbjct: 2 LLELNIENY-AIIEDMKINFQKGLNVITGETGSGKSIIIDALGMVLGGRANKDVIKAGKD 60 Query: 89 KRSIK 93 I+ Sbjct: 61 FCHIE 65 >gi|188588555|ref|YP_001921543.1| DNA repair protein RecN [Clostridium botulinum E3 str. Alaska E43] gi|188498836|gb|ACD51972.1| DNA repair protein RecN [Clostridium botulinum E3 str. Alaska E43] Length = 562 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I +F + + F + I++G+ G GKS L +AI+++ G + Sbjct: 2 LIQLNIKNF-ALIQEITMNFNEGFNILSGETGAGKSILIDAIDYVLGGKFSKSL 54 >gi|156042408|ref|XP_001587761.1| hypothetical protein SS1G_11001 [Sclerotinia sclerotiorum 1980] gi|154695388|gb|EDN95126.1| hypothetical protein SS1G_11001 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1177 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F E K+ + V G+NG GKS++ I G G S+K Sbjct: 129 IEEIQCMNFMNH-ENLKVMLGPLINFVVGENGAGKSAVLTGITLCLGGKPSATNRGSSMK 187 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IKT + V + K Q Sbjct: 188 SL-IKTGTDRGILVVKLKNQ 206 >gi|311992597|ref|YP_004009465.1| gp46 recombination endonuclease subunit [Acinetobacter phage Ac42] gi|298684380|gb|ADI96341.1| gp46 recombination endonuclease subunit [Acinetobacter phage Ac42] Length = 560 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL--TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKLL ++ + + F +H T+V G+NG GKS+ EAI + +G R Sbjct: 4 FKLLRVKYKNIMSVGQQPIEIFLNHCANTLVTGKNGAGKSTFLEAITFALFGKPFRDVKK 63 Query: 85 DSIKKRSIK 93 + S K Sbjct: 64 GQLINSSNK 72 >gi|296100374|ref|YP_003610520.1| recombination protein F [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054833|gb|ADF59571.1| recombination protein F [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 357 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|197302363|ref|ZP_03167420.1| hypothetical protein RUMLAC_01092 [Ruminococcus lactaris ATCC 29176] gi|197298542|gb|EDY33085.1| hypothetical protein RUMLAC_01092 [Ruminococcus lactaris ATCC 29176] Length = 548 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++ I +F F+E Q D + ++ G+N YGKS+L I + +G + R + Sbjct: 1 MKITELYIKNFGRFSE-QHFYIKDGVQVIYGENEYGKSTLQAFIRAMLFGMERGRGKAAA 59 Query: 87 IKKRSIKTPMP 97 S P Sbjct: 60 KDDFSKYQPWE 70 >gi|116072961|ref|ZP_01470223.1| RecF protein:ABC transporter [Synechococcus sp. RS9916] gi|116068266|gb|EAU74018.1| RecF protein:ABC transporter [Synechococcus sp. RS9916] Length = 903 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KLL ++ R + K++F LT++ G N GKSSL EA+ Sbjct: 1 MKLLSCSLNSVRRHAAL-KLDFHPGLTLITGANESGKSSLVEAL 43 >gi|325117638|emb|CBZ53190.1| putative DNA repair protein RAD50 [Neospora caninum Liverpool] Length = 1584 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + R F + F LT++ G NG GK+++ E +++ G Sbjct: 4 LERLGVQGIRCFAPDHLEVLAFEKPLTVIVGHNGAGKTTVVECLKYATTG 53 >gi|311277335|ref|YP_003939566.1| DNA replication and repair protein RecF [Enterobacter cloacae SCF1] gi|308746530|gb|ADO46282.1| DNA replication and repair protein RecF [Enterobacter cloacae SCF1] Length = 357 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|256423868|ref|YP_003124521.1| SMC domain protein [Chitinophaga pinensis DSM 2588] gi|256038776|gb|ACU62320.1| SMC domain protein [Chitinophaga pinensis DSM 2588] Length = 1244 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + G G GKS+L +A+ Y T R Sbjct: 1 MKILAIRFKNLASLEDTNEIDFTKEPLSKAGIFAITGPTGAGKSTLLDALCLALYARTPR 60 Query: 81 RKH 83 Sbjct: 61 YLQ 63 >gi|261341640|ref|ZP_05969498.1| hypothetical protein ENTCAN_08108 [Enterobacter cancerogenus ATCC 35316] gi|288315997|gb|EFC54935.1| DNA replication and repair protein RecF [Enterobacter cancerogenus ATCC 35316] Length = 357 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|195941091|ref|ZP_03086473.1| recombination protein F [Escherichia coli O157:H7 str. EC4024] gi|295095338|emb|CBK84428.1| DNA replication and repair protein RecF [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 357 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIKT 94 + + ++ Sbjct: 60 VIRHEQES 67 >gi|170025363|ref|YP_001721868.1| SMC (structural maintenance of chromosomes) family protein [Yersinia pseudotuberculosis YPIII] gi|169751897|gb|ACA69415.1| SMC (structural maintenance of chromosomes) family protein [Yersinia pseudotuberculosis YPIII] Length = 682 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQK-----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I ++R F + E L I+ G+N GK+ + +AI + + Sbjct: 1 MYLKHISARNYRAFGDSTSTPALDWELNPGLNILVGENDAGKTCIVDAIRQVLLTTSYEN 60 Query: 82 KH 83 Sbjct: 61 IR 62 >gi|118586762|ref|ZP_01544199.1| DNA repair protein RecN [Oenococcus oeni ATCC BAA-1163] gi|118432850|gb|EAV39579.1| DNA repair protein RecN [Oenococcus oeni ATCC BAA-1163] Length = 551 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F + +I+F LT++ G+ G GKS + +A+ L + S+ Sbjct: 2 LNNLSIKNFAIIND-AQIDFDKGLTVMTGETGAGKSIIIDALSLLVGERSY-----SSMI 55 Query: 89 KRSIK 93 ++ K Sbjct: 56 RKGEK 60 >gi|330013057|ref|ZP_08307561.1| DNA repair protein RecN [Klebsiella sp. MS 92-3] gi|328533605|gb|EGF60320.1| DNA repair protein RecN [Klebsiella sp. MS 92-3] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|326478705|gb|EGE02715.1| DNA repair protein Rad18 [Trichophyton equinum CBS 127.97] Length = 1126 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 95 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 153 >gi|290510931|ref|ZP_06550300.1| DNA repair protein RecN [Klebsiella sp. 1_1_55] gi|289775924|gb|EFD83923.1| DNA repair protein RecN [Klebsiella sp. 1_1_55] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|288934009|ref|YP_003438068.1| DNA repair protein RecN [Klebsiella variicola At-22] gi|288888738|gb|ADC57056.1| DNA repair protein RecN [Klebsiella variicola At-22] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|259419471|ref|ZP_05743387.1| DNA sulfur modification protein DndD [Silicibacter sp. TrichCH4B] gi|259344712|gb|EEW56599.1| DNA sulfur modification protein DndD [Silicibacter sp. TrichCH4B] Length = 647 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 12/89 (13%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYG--- 76 + K +I + + + ++ + G NG GK++ +AI YG Sbjct: 1 MMKFSEITLENIGLYVGKHSFNLETTPADGSNVVAILGHNGGGKTTFLDAIRLALYGRRA 60 Query: 77 ---YTQRRKHGDSIKKRSIKTPMPMCMAV 102 T + + D + ++ T A+ Sbjct: 61 LGPRTAQSTYEDHLLRKISATASSRDAAI 89 >gi|262043861|ref|ZP_06016950.1| DNA repair protein RecN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038795|gb|EEW39977.1| DNA repair protein RecN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|238896061|ref|YP_002920797.1| recombination and repair protein [Klebsiella pneumoniae NTUH-K2044] gi|238548379|dbj|BAH64730.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|206579944|ref|YP_002237046.1| DNA repair protein RecN [Klebsiella pneumoniae 342] gi|206569002|gb|ACI10778.1| DNA repair protein RecN [Klebsiella pneumoniae 342] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|162449092|ref|YP_001611459.1| chromosome partition protein fragment [Sorangium cellulosum 'So ce 56'] gi|161159674|emb|CAN90979.1| chromosome partition protein fragment [Sorangium cellulosum 'So ce 56'] Length = 456 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + EI F+ + ++ LT+ G NG GKS+L EAI Sbjct: 2 ITRFEIDGFKSLRDFM-VDLEP-LTVFVGPNGAGKSNLLEAI 41 >gi|152971465|ref|YP_001336574.1| recombination and repair protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956314|gb|ABR78344.1| protein used in recombination and DNA repair [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 553 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R D ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVR 56 Query: 89 KRSIK 93 + + + Sbjct: 57 RGATR 61 >gi|212709150|ref|ZP_03317278.1| hypothetical protein PROVALCAL_00183 [Providencia alcalifaciens DSM 30120] gi|212688062|gb|EEB47590.1| hypothetical protein PROVALCAL_00183 [Providencia alcalifaciens DSM 30120] Length = 1227 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|153003647|ref|YP_001377972.1| DNA repair protein RecN [Anaeromyxobacter sp. Fw109-5] gi|152027220|gb|ABS24988.1| DNA repair protein RecN [Anaeromyxobacter sp. Fw109-5] Length = 611 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS F + ++ F L ++ G+ G GKS L A+ + G R G+ ++ Sbjct: 2 LTTLRISGF-AIVDAIEVRFGPGLNVLTGETGAGKSILVNALHLVLGG----RMTGEVLR 56 Query: 89 KRSIKTPMPMCMAVP 103 + + + +P Sbjct: 57 DGAEEAVVEALFELP 71 >gi|146310526|ref|YP_001175600.1| exonuclease subunit SbcC [Enterobacter sp. 638] gi|145317402|gb|ABP59549.1| exonuclease SbcC [Enterobacter sp. 638] Length = 1042 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|168215443|ref|ZP_02641068.1| DNA repair protein RecN [Clostridium perfringens NCTC 8239] gi|182382299|gb|EDT79778.1| DNA repair protein RecN [Clostridium perfringens NCTC 8239] Length = 565 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|330817363|ref|YP_004361068.1| hypothetical protein bgla_1g24880 [Burkholderia gladioli BSR3] gi|327369756|gb|AEA61112.1| hypothetical protein bgla_1g24880 [Burkholderia gladioli BSR3] Length = 610 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++I +FRG + ++ F+ T++ G N GKS++ EA++ + Sbjct: 1 MRVSRLQIENFRGI-KKAELHFS-GHTLLIGGNNVGKSTICEALDLVLG 47 >gi|299148668|ref|ZP_07041730.1| hypothetical protein HMPREF9010_02947 [Bacteroides sp. 3_1_23] gi|298513429|gb|EFI37316.1| hypothetical protein HMPREF9010_02947 [Bacteroides sp. 3_1_23] Length = 732 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ + I ++R + I+F + T++ G N GK+S AI W Sbjct: 1 MKIQSVHIRNYRKL-KNCHIDFDEKKTVLVGANNSGKTSAISAIVWFL 47 >gi|284504150|ref|YP_003406865.1| SMC1 family ATPase [Marseillevirus] gi|282935588|gb|ADB03903.1| SMC1 family ATPase [Marseillevirus] Length = 785 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + +FR F E L +++ +G GKS++ A W YG ++ Sbjct: 2 EVSLRNFRCFKEKDVAFPEKGLVLLSAPSGTGKSTVLNAFFWALYGELKK 51 >gi|255659557|ref|ZP_05404966.1| ATP binding protein [Mitsuokella multacida DSM 20544] gi|260848113|gb|EEX68120.1| ATP binding protein [Mitsuokella multacida DSM 20544] Length = 422 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I I F+G E ++ F ++ G+NG GK+SL EA+ G+ HG Sbjct: 1 MHVKTIAIHDFKGI-EHCQLTFKPGFNLIIGENGKGKTSLLEALAIGISGF-LSGVHGGG 58 Query: 87 IKKRSIKTP 95 I R+I++ Sbjct: 59 IHPRNIQSE 67 >gi|229133193|ref|ZP_04262025.1| Exonuclease [Bacillus cereus BDRD-ST196] gi|228650212|gb|EEL06215.1| Exonuclease [Bacillus cereus BDRD-ST196] Length = 1022 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVIDFKDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTNML 60 Query: 90 RSI 92 RS Sbjct: 61 RSQ 63 >gi|91214642|ref|ZP_01251615.1| DNA replication and repair protein RecF [Psychroflexus torquis ATCC 700755] gi|91187069|gb|EAS73439.1| DNA replication and repair protein RecF [Psychroflexus torquis ATCC 700755] Length = 364 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + +++ F E +EF + G+NG GK+++ +AI L +G + Sbjct: 3 IKKLSLINYKNF-EQLTLEFDSKINCFVGKNGIGKTNVLDAIYHLAFGKS 51 >gi|77458653|ref|YP_348159.1| hypothetical protein Pfl01_2428 [Pseudomonas fluorescens Pf0-1] gi|77382656|gb|ABA74169.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 849 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 27 FKLLDI-EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 F L + + S F+ + +++ + +T+V G+NG GKSSL +A++ Sbjct: 77 FHLETLSDFSGFKKLSGTLRLDLSKRITLVFGRNGAGKSSLCQALK 122 >gi|58584386|ref|YP_197959.1| recombination protein F [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418702|gb|AAW70717.1| Recombinational DNA repair ATPase, RecF [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 356 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++S+FR + ++ D ++ G+NG GK+++ EAI L ++ + Sbjct: 6 YIKKLKLSNFRNHLNFE-LDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEM 64 Query: 88 KKR 90 + R Sbjct: 65 QNR 67 >gi|51247032|ref|YP_066915.1| hypothetical protein DPPB61 [Desulfotalea psychrophila LSv54] gi|50878069|emb|CAG37925.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 382 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 Y + L + I F+ E+ E AD L +V G NG GKS+L Sbjct: 11 YGSNMSISLDKLTIRGFKSIRELVDFELAD-LNVVVGGNGAGKSNLI 56 >gi|330965212|gb|EGH65472.1| hypothetical protein PSYAC_11291 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 438 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L+ IE+ +F+ + E + A +T + G N GKS++ EAI WL G Sbjct: 2 LISIELKNFKSY-ESASLPLA-AMTFLIGANASGKSNVLEAIRLLNWLAKGS 51 >gi|320328461|gb|EFW84463.1| hypothetical protein PsgRace4_18343 [Pseudomonas syringae pv. glycinea str. race 4] Length = 438 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L+ IE+ +F+ + E + A +T + G N GKS++ EAI WL G Sbjct: 2 LISIELKNFKSY-ESASLPLA-AMTFLIGANASGKSNVLEAIRLLNWLAKGS 51 >gi|320324418|gb|EFW80497.1| hypothetical protein PsgB076_13239 [Pseudomonas syringae pv. glycinea str. B076] Length = 438 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L+ IE+ +F+ + E + A +T + G N GKS++ EAI WL G Sbjct: 2 LISIELKNFKSY-ESASLPLA-AMTFLIGANASGKSNVLEAIRLLNWLAKGS 51 >gi|289627047|ref|ZP_06460001.1| hypothetical protein PsyrpaN_18194 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646297|ref|ZP_06477640.1| hypothetical protein Psyrpa2_00870 [Pseudomonas syringae pv. aesculi str. 2250] gi|330866783|gb|EGH01492.1| hypothetical protein PSYAE_05865 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 438 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L+ IE+ +F+ + E + A +T + G N GKS++ EAI WL G Sbjct: 2 LISIELKNFKSY-ESASLPLA-AMTFLIGANASGKSNVLEAIRLLNWLAKGS 51 >gi|312193900|ref|YP_004013961.1| DNA replication and repair protein RecF [Frankia sp. EuI1c] gi|311225236|gb|ADP78091.1| DNA replication and repair protein RecF [Frankia sp. EuI1c] Length = 374 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ FR + ++ + + G NG GK++L EA+ ++ + R Sbjct: 1 MHVTHLQLVDFRSYPALE-LTLPAGVVTFVGANGQGKTNLLEAVGYVATLGSHRVSGDAP 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIREGAE 66 >gi|229011612|ref|ZP_04168795.1| Exonuclease [Bacillus mycoides DSM 2048] gi|228749570|gb|EEL99412.1| Exonuclease [Bacillus mycoides DSM 2048] Length = 1022 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVIDFKDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTNML 60 Query: 90 RSI 92 RS Sbjct: 61 RSQ 63 >gi|229167176|ref|ZP_04294917.1| Exonuclease [Bacillus cereus AH621] gi|228616214|gb|EEK73298.1| Exonuclease [Bacillus cereus AH621] Length = 1022 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVIDFKDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTNML 60 Query: 90 RSI 92 RS Sbjct: 61 RSQ 63 >gi|262197043|ref|YP_003268252.1| hypothetical protein Hoch_3860 [Haliangium ochraceum DSM 14365] gi|262080390|gb|ACY16359.1| hypothetical protein Hoch_3860 [Haliangium ochraceum DSM 14365] Length = 345 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L +EI FR F E+ + ++ G NG GK++L EA+ Sbjct: 2 LPSLEIRGFRCFRELSIAPLGR-INLIVGNNGVGKTALLEALR 43 >gi|241518212|ref|YP_002978840.1| hypothetical protein Rleg_5469 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862625|gb|ACS60289.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 763 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +E+S+FR I+F TI G N GK+S A+ + + Sbjct: 1 MRIKFVEVSNFRKLKS-THIDFDKKTTIFVGANNSGKTSAMVALRYFLLSPNRLALRD 57 >gi|163855255|ref|YP_001629553.1| RecF protein [Bordetella petrii DSM 12804] gi|163258983|emb|CAP41282.1| RecF protein [Bordetella petrii] Length = 590 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L ++ +S+F+G + ++ + + G N GKS+++EA+ G +R Sbjct: 1 MRLTNLSVSNFQG-VKSAELPLPTAIGFITGDNYAGKSTIAEAVRMALLGSAER 53 >gi|71734086|ref|YP_274638.1| DNA replication and repair protein recF [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554639|gb|AAZ33850.1| DNA replication and repair protein recF [Pseudomonas syringae pv. phaseolicola 1448A] Length = 121 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L+ IE+ +F+ + E + A +T + G N GKS++ EAI WL G Sbjct: 2 LISIELKNFKSY-ESASLPLA-AMTFLIGANASGKSNVLEAIRLLNWLAKGS 51 >gi|300698062|ref|YP_003748723.1| hypothetical protein RCFBP_mp30264 [Ralstonia solanacearum CFBP2957] gi|299074786|emb|CBJ54349.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 505 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 RK LL + + RGF E + F +T + G NG GK+++ A Sbjct: 28 RKYGKYLLRVRMQKLRGF-EETSVTFDFPVTALVGPNGGGKTTILGA 73 >gi|325266163|ref|ZP_08132847.1| ATP/GTP-binding protein [Kingella denitrificans ATCC 33394] gi|324982393|gb|EGC18021.1| ATP/GTP-binding protein [Kingella denitrificans ATCC 33394] Length = 598 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL I+I FR + +I+ ++ + G N GK+++ A+ Sbjct: 1 MKLKRIDIKRFRSINDLKLEIDLDNNFISICGPNNVGKTNVLRAL 45 >gi|302496502|ref|XP_003010252.1| DNA repair protein Rad18, putative [Arthroderma benhamiae CBS 112371] gi|291173794|gb|EFE29612.1| DNA repair protein Rad18, putative [Arthroderma benhamiae CBS 112371] Length = 1062 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 93 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 151 >gi|220927491|ref|YP_002504400.1| hypothetical protein Ccel_0032 [Clostridium cellulolyticum H10] gi|219997819|gb|ACL74420.1| conserved hypothetical protein [Clostridium cellulolyticum H10] Length = 664 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F + +F+D L ++ G N GKS+L I+ + YG Sbjct: 1 MKIKRLHVRGFGKLQDFN-CDFSDGLNVIYGHNESGKSTLMAFIKAILYG 49 >gi|124265200|ref|YP_001019204.1| ATPase [Methylibium petroleiphilum PM1] gi|124257975|gb|ABM92969.1| ATPase [Methylibium petroleiphilum PM1] Length = 411 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 18/97 (18%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWL-------FYGYT 78 ++ + + +FR IE + LT++ G NG GK++L + +L Sbjct: 9 RIHYLRVQNFRALRN---IELKNITPLTVLLGPNGSGKTTLFDVFNFLSECFQGGLRQAW 65 Query: 79 QRRKHGDSIKKRSIKTPMPMCM------AVPRCKYQL 109 +R +K R P+ + + A P Y L Sbjct: 66 DKRGRAKELKTRGADGPVVIEIKYRESKATPLITYHL 102 >gi|332997866|gb|EGK17474.1| DNA replication and repair protein recF [Shigella flexneri K-272] gi|333013661|gb|EGK33026.1| DNA replication and repair protein recF [Shigella flexneri K-227] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|332996042|gb|EGK15669.1| DNA replication and repair protein recF [Shigella flexneri VA-6] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|332345691|gb|AEE59025.1| DNA replication and repair protein RecF [Escherichia coli UMNK88] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|332084890|gb|EGI90073.1| DNA replication and repair protein recF [Shigella boydii 5216-82] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|326793325|ref|YP_004311145.1| DNA replication and repair protein recF [Marinomonas mediterranea MMB-1] gi|326544089|gb|ADZ89309.1| DNA replication and repair protein recF [Marinomonas mediterranea MMB-1] Length = 366 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KH 83 L ++I+ R KI+F + ++ G+NG GK+S+ EAI L YG + R KH Sbjct: 1 MPLARLDIAKLRNL---TKIQFEPSHQVNVIVGENGSGKTSVLEAIHLLSYGRSFRSHKH 57 Query: 84 GDSIKKRSIK 93 I+ + Sbjct: 58 KTYIQHDQAE 67 >gi|327306567|ref|XP_003237975.1| DNA repair protein Rad18 [Trichophyton rubrum CBS 118892] gi|326460973|gb|EGD86426.1| DNA repair protein Rad18 [Trichophyton rubrum CBS 118892] Length = 1125 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 85 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 143 >gi|325499507|gb|EGC97366.1| recombination protein F [Escherichia fergusonii ECD227] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|320174826|gb|EFW49949.1| DNA recombination and repair protein RecF [Shigella dysenteriae CDC 74-1112] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|312967890|ref|ZP_07782102.1| DNA replication and repair protein recF [Escherichia coli 2362-75] gi|312287451|gb|EFR15359.1| DNA replication and repair protein recF [Escherichia coli 2362-75] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|301644372|ref|ZP_07244373.1| recombination protein F [Escherichia coli MS 146-1] gi|301077313|gb|EFK92119.1| recombination protein F [Escherichia coli MS 146-1] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|301059438|ref|ZP_07200359.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446474|gb|EFK10318.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 556 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I I +F+G +IE +T+ G N GKS++ +A+ + + ++ + D Sbjct: 1 MLITAITIENFKGIQNPVRIELKP-ITLFFGPNSAGKSTIIQAMHYAHEIFERQNLNPD 58 >gi|256021282|ref|ZP_05435147.1| recombination protein F [Shigella sp. D9] gi|331670544|ref|ZP_08371383.1| DNA replication and repair protein RecF [Escherichia coli TA271] gi|332282513|ref|ZP_08394926.1| gap repair protein [Shigella sp. D9] gi|331062606|gb|EGI34526.1| DNA replication and repair protein RecF [Escherichia coli TA271] gi|332104865|gb|EGJ08211.1| gap repair protein [Shigella sp. D9] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|218702549|ref|YP_002410178.1| recombination protein F [Escherichia coli IAI39] gi|226737791|sp|B7NR02|RECF_ECO7I RecName: Full=DNA replication and repair protein recF gi|218372535|emb|CAR20410.1| gap repair protein [Escherichia coli IAI39] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|218551230|ref|YP_002385022.1| recombination protein F [Escherichia fergusonii ATCC 35469] gi|226737798|sp|B7LK42|RECF_ESCF3 RecName: Full=DNA replication and repair protein recF gi|218358772|emb|CAQ91429.1| gap repair protein [Escherichia fergusonii ATCC 35469] gi|323965761|gb|EGB61212.1| DNA replication and repair protein RecF [Escherichia coli M863] gi|323975233|gb|EGB70337.1| DNA replication and repair protein RecF [Escherichia coli TW10509] gi|324111597|gb|EGC05578.1| DNA replication and repair protein RecF [Escherichia fergusonii B253] gi|327250843|gb|EGE62545.1| DNA replication and repair protein recF [Escherichia coli STEC_7v] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|168214389|ref|ZP_02640014.1| DNA repair protein RecN [Clostridium perfringens CPE str. F4969] gi|170714117|gb|EDT26299.1| DNA repair protein RecN [Clostridium perfringens CPE str. F4969] Length = 565 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|145301156|ref|YP_001143997.1| hypothetical protein ASA_4333 [Aeromonas salmonicida subsp. salmonicida A449] gi|142853928|gb|ABO92249.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 483 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 4/47 (8%) Query: 27 FKLLDIEI-SHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 K+ ++ I S F+ E K++F ++ +T+V G+NG GKS++ EA+ Sbjct: 1 MKVNNLHIRSRFKNL-ENVKVDFDENHLMTVVVGRNGSGKSNVLEAL 46 >gi|311748558|ref|ZP_07722343.1| hypothetical protein ALPR1_19853 [Algoriphagus sp. PR1] gi|126577077|gb|EAZ81325.1| hypothetical protein ALPR1_19853 [Algoriphagus sp. PR1] Length = 631 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + I +F+G Q+ F L I+ G+NG K++L +AI Sbjct: 1 MYLSKVHIQNFKGIKS-QEFSFDSKLNIIIGENGSHKTALIDAIR 44 >gi|290548|gb|AAA62051.1| recF (CG Site No. 308) [Escherichia coli] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|82546036|ref|YP_409983.1| recombination protein F [Shigella boydii Sb227] gi|97180953|sp|Q31UV3|RECF_SHIBS RecName: Full=DNA replication and repair protein recF gi|81247447|gb|ABB68155.1| RecF [Shigella boydii Sb227] gi|320185535|gb|EFW60301.1| DNA recombination and repair protein RecF [Shigella flexneri CDC 796-83] gi|332089378|gb|EGI94482.1| DNA replication and repair protein recF [Shigella boydii 3594-74] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|24114990|ref|NP_709500.1| recombination protein F [Shigella flexneri 2a str. 301] gi|30065008|ref|NP_839179.1| recombination protein F [Shigella flexneri 2a str. 2457T] gi|51316304|sp|Q7BZ80|RECF_SHIFL RecName: Full=DNA replication and repair protein recF gi|24054242|gb|AAN45207.1| Rec protein [Shigella flexneri 2a str. 301] gi|30043269|gb|AAP18990.1| Rec protein [Shigella flexneri 2a str. 2457T] gi|281603073|gb|ADA76057.1| DNA replication and repair protein recF [Shigella flexneri 2002017] gi|313647708|gb|EFS12156.1| DNA replication and repair protein recF [Shigella flexneri 2a str. 2457T] gi|332750521|gb|EGJ80930.1| DNA replication and repair protein recF [Shigella flexneri K-671] gi|332750692|gb|EGJ81100.1| DNA replication and repair protein recF [Shigella flexneri 4343-70] gi|332751786|gb|EGJ82184.1| DNA replication and repair protein recF [Shigella flexneri 2747-71] gi|332764071|gb|EGJ94308.1| DNA replication/repair protein RecF [Shigella flexneri 2930-71] gi|332997495|gb|EGK17111.1| DNA replication and repair protein recF [Shigella flexneri K-218] gi|333013217|gb|EGK32590.1| DNA replication and repair protein recF [Shigella flexneri K-304] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|194431058|ref|ZP_03063351.1| DNA replication and repair protein RecF [Shigella dysenteriae 1012] gi|194420513|gb|EDX36589.1| DNA replication and repair protein RecF [Shigella dysenteriae 1012] gi|320180041|gb|EFW54983.1| DNA recombination and repair protein RecF [Shigella boydii ATCC 9905] gi|332084050|gb|EGI89257.1| DNA replication and repair protein recF [Shigella dysenteriae 155-74] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|188491708|ref|ZP_02998978.1| DNA replication and repair protein RecF [Escherichia coli 53638] gi|188486907|gb|EDU62010.1| DNA replication and repair protein RecF [Escherichia coli 53638] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|110644043|ref|YP_671773.1| recombination protein F [Escherichia coli 536] gi|191170384|ref|ZP_03031937.1| DNA replication and repair protein RecF [Escherichia coli F11] gi|300983651|ref|ZP_07176692.1| recombination protein F [Escherichia coli MS 200-1] gi|123343429|sp|Q0TB07|RECF_ECOL5 RecName: Full=DNA replication and repair protein recF gi|110345635|gb|ABG71872.1| DNA replication and repair protein RecF [Escherichia coli 536] gi|190909192|gb|EDV68778.1| DNA replication and repair protein RecF [Escherichia coli F11] gi|300306874|gb|EFJ61394.1| recombination protein F [Escherichia coli MS 200-1] gi|324012739|gb|EGB81958.1| recombination protein F [Escherichia coli MS 60-1] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|193063850|ref|ZP_03044937.1| DNA replication and repair protein RecF [Escherichia coli E22] gi|194428115|ref|ZP_03060659.1| DNA replication and repair protein RecF [Escherichia coli B171] gi|209921177|ref|YP_002295261.1| recombination protein F [Escherichia coli SE11] gi|260846515|ref|YP_003224293.1| gap repair protein RecF [Escherichia coli O103:H2 str. 12009] gi|226737795|sp|B6I3T3|RECF_ECOSE RecName: Full=DNA replication and repair protein recF gi|192930565|gb|EDV83172.1| DNA replication and repair protein RecF [Escherichia coli E22] gi|194413873|gb|EDX30151.1| DNA replication and repair protein RecF [Escherichia coli B171] gi|209914436|dbj|BAG79510.1| DNA replication and repair protein RecF [Escherichia coli SE11] gi|257761662|dbj|BAI33159.1| gap repair protein RecF [Escherichia coli O103:H2 str. 12009] gi|323161048|gb|EFZ46967.1| DNA replication and repair protein recF [Escherichia coli E128010] gi|324018432|gb|EGB87651.1| recombination protein F [Escherichia coli MS 117-3] gi|324115948|gb|EGC09874.1| DNA replication and repair protein RecF [Escherichia coli E1167] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|187732412|ref|YP_001882466.1| recombination protein F [Shigella boydii CDC 3083-94] gi|226737836|sp|B2TUS8|RECF_SHIB3 RecName: Full=DNA replication and repair protein recF gi|187429404|gb|ACD08678.1| DNA replication and repair protein RecF [Shigella boydii CDC 3083-94] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|15804294|ref|NP_290333.1| recombination protein F [Escherichia coli O157:H7 EDL933] gi|15833889|ref|NP_312662.1| recombination protein F [Escherichia coli O157:H7 str. Sakai] gi|16131568|ref|NP_418155.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|26250441|ref|NP_756481.1| recombination protein F [Escherichia coli CFT073] gi|74314014|ref|YP_312433.1| recombination protein F [Shigella sonnei Ss046] gi|89110313|ref|AP_004093.1| gap repair protein [Escherichia coli str. K-12 substr. W3110] gi|91213222|ref|YP_543208.1| recombination protein F [Escherichia coli UTI89] gi|117625976|ref|YP_859299.1| recombination protein F [Escherichia coli APEC O1] gi|157155989|ref|YP_001465185.1| recombination protein F [Escherichia coli E24377A] gi|157163180|ref|YP_001460498.1| recombination protein F [Escherichia coli HS] gi|168748584|ref|ZP_02773606.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4113] gi|168753589|ref|ZP_02778596.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4401] gi|168759886|ref|ZP_02784893.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4501] gi|168766187|ref|ZP_02791194.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4486] gi|168772265|ref|ZP_02797272.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4196] gi|168779922|ref|ZP_02804929.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4076] gi|168798735|ref|ZP_02823742.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC508] gi|170018064|ref|YP_001723018.1| recombination protein F [Escherichia coli ATCC 8739] gi|170083202|ref|YP_001732522.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|170684195|ref|YP_001746028.1| recombination protein F [Escherichia coli SMS-3-5] gi|191165795|ref|ZP_03027633.1| DNA replication and repair protein RecF [Escherichia coli B7A] gi|193069194|ref|ZP_03050151.1| DNA replication and repair protein RecF [Escherichia coli E110019] gi|194435781|ref|ZP_03067884.1| DNA replication and repair protein RecF [Escherichia coli 101-1] gi|195936321|ref|ZP_03081703.1| recombination protein F [Escherichia coli O157:H7 str. EC4024] gi|208808901|ref|ZP_03251238.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4206] gi|208814025|ref|ZP_03255354.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4045] gi|208819308|ref|ZP_03259628.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4042] gi|209397495|ref|YP_002273226.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4115] gi|215489040|ref|YP_002331471.1| recombination protein F [Escherichia coli O127:H6 str. E2348/69] gi|217324896|ref|ZP_03440980.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. TW14588] gi|218556265|ref|YP_002389179.1| recombination protein F [Escherichia coli IAI1] gi|218560775|ref|YP_002393688.1| recombination protein F [Escherichia coli S88] gi|218691988|ref|YP_002400200.1| recombination protein F [Escherichia coli ED1a] gi|218697422|ref|YP_002405089.1| recombination protein F [Escherichia coli 55989] gi|218707346|ref|YP_002414865.1| recombination protein F [Escherichia coli UMN026] gi|227883921|ref|ZP_04001726.1| recombination protein F [Escherichia coli 83972] gi|237703500|ref|ZP_04533981.1| recombination protein F [Escherichia sp. 3_2_53FAA] gi|238902790|ref|YP_002928586.1| gap repair protein [Escherichia coli BW2952] gi|253771438|ref|YP_003034269.1| recombination protein F [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038917|ref|ZP_04872969.1| ssDNA and dsDNA binding protein [Escherichia sp. 1_1_43] gi|254163651|ref|YP_003046759.1| recombination protein F [Escherichia coli B str. REL606] gi|254795703|ref|YP_003080540.1| recombination protein F [Escherichia coli O157:H7 str. TW14359] gi|256025569|ref|ZP_05439434.1| recombination protein F [Escherichia sp. 4_1_40B] gi|260857889|ref|YP_003231780.1| gap repair protein RecF [Escherichia coli O26:H11 str. 11368] gi|260870431|ref|YP_003236833.1| gap repair protein RecF [Escherichia coli O111:H- str. 11128] gi|261225853|ref|ZP_05940134.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258898|ref|ZP_05951431.1| gap repair protein RecF [Escherichia coli O157:H7 str. FRIK966] gi|291285119|ref|YP_003501937.1| DNA replication and repair protein recF [Escherichia coli O55:H7 str. CB9615] gi|293407340|ref|ZP_06651262.1| DNA replication and repair protein recF [Escherichia coli FVEC1412] gi|293413154|ref|ZP_06655820.1| conserved hypothetical protein [Escherichia coli B354] gi|293417173|ref|ZP_06659800.1| DNA replication and repair protein recF [Escherichia coli B185] gi|293464024|ref|ZP_06664438.1| DNA replication and repair protein recF [Escherichia coli B088] gi|297518855|ref|ZP_06937241.1| recombination protein F [Escherichia coli OP50] gi|298383081|ref|ZP_06992676.1| DNA replication and repair protein recF [Escherichia coli FVEC1302] gi|300815053|ref|ZP_07095278.1| recombination protein F [Escherichia coli MS 107-1] gi|300824315|ref|ZP_07104431.1| recombination protein F [Escherichia coli MS 119-7] gi|300896029|ref|ZP_07114590.1| recombination protein F [Escherichia coli MS 198-1] gi|300903025|ref|ZP_07120967.1| recombination protein F [Escherichia coli MS 84-1] gi|300917470|ref|ZP_07134130.1| recombination protein F [Escherichia coli MS 115-1] gi|300925524|ref|ZP_07141399.1| recombination protein F [Escherichia coli MS 182-1] gi|300932331|ref|ZP_07147599.1| recombination protein F [Escherichia coli MS 187-1] gi|300940885|ref|ZP_07155412.1| recombination protein F [Escherichia coli MS 21-1] gi|300947539|ref|ZP_07161716.1| recombination protein F [Escherichia coli MS 116-1] gi|300956294|ref|ZP_07168596.1| recombination protein F [Escherichia coli MS 175-1] gi|300984542|ref|ZP_07177032.1| recombination protein F [Escherichia coli MS 45-1] gi|301020911|ref|ZP_07184966.1| recombination protein F [Escherichia coli MS 69-1] gi|301028493|ref|ZP_07191733.1| recombination protein F [Escherichia coli MS 196-1] gi|301047518|ref|ZP_07194594.1| recombination protein F [Escherichia coli MS 185-1] gi|301305954|ref|ZP_07212036.1| recombination protein F [Escherichia coli MS 124-1] gi|301325008|ref|ZP_07218558.1| recombination protein F [Escherichia coli MS 78-1] gi|306815947|ref|ZP_07450085.1| recombination protein F [Escherichia coli NC101] gi|307140400|ref|ZP_07499756.1| recombination protein F [Escherichia coli H736] gi|307313231|ref|ZP_07592856.1| DNA replication and repair protein RecF [Escherichia coli W] gi|312972008|ref|ZP_07786182.1| DNA replication and repair protein recF [Escherichia coli 1827-70] gi|331644424|ref|ZP_08345553.1| DNA replication and repair protein RecF [Escherichia coli H736] gi|331649526|ref|ZP_08350612.1| DNA replication and repair protein RecF [Escherichia coli M605] gi|331655360|ref|ZP_08356359.1| DNA replication and repair protein RecF [Escherichia coli M718] gi|331660042|ref|ZP_08360980.1| DNA replication and repair protein RecF [Escherichia coli TA206] gi|331665350|ref|ZP_08366251.1| DNA replication and repair protein RecF [Escherichia coli TA143] gi|331675190|ref|ZP_08375943.1| DNA replication and repair protein RecF [Escherichia coli TA280] gi|331679798|ref|ZP_08380468.1| DNA replication and repair protein RecF [Escherichia coli H591] gi|331685424|ref|ZP_08386010.1| DNA replication and repair protein RecF [Escherichia coli H299] gi|67471979|sp|P0A7H0|RECF_ECOLI RecName: Full=DNA replication and repair protein recF gi|67471980|sp|P0A7H1|RECF_ECOL6 RecName: Full=DNA replication and repair protein recF gi|67471981|sp|P0A7H2|RECF_ECO57 RecName: Full=DNA replication and repair protein recF gi|97180964|sp|Q3YWB4|RECF_SHISS RecName: Full=DNA replication and repair protein recF gi|122421840|sp|Q1R4N7|RECF_ECOUT RecName: Full=DNA replication and repair protein recF gi|166220709|sp|A1AHN5|RECF_ECOK1 RecName: Full=DNA replication and repair protein recF gi|166918721|sp|A7ZTQ6|RECF_ECO24 RecName: Full=DNA replication and repair protein recF gi|166918722|sp|A8A6G1|RECF_ECOHS RecName: Full=DNA replication and repair protein recF gi|189039623|sp|B1IYP4|RECF_ECOLC RecName: Full=DNA replication and repair protein recF gi|226737789|sp|B7MGC1|RECF_ECO45 RecName: Full=DNA replication and repair protein recF gi|226737790|sp|B5YXA2|RECF_ECO5E RecName: Full=DNA replication and repair protein recF gi|226737792|sp|B7M4I9|RECF_ECO8A RecName: Full=DNA replication and repair protein recF gi|226737793|sp|B1X9S9|RECF_ECODH RecName: Full=DNA replication and repair protein recF gi|226737794|sp|B7NF17|RECF_ECOLU RecName: Full=DNA replication and repair protein recF gi|226737796|sp|B1LL25|RECF_ECOSM RecName: Full=DNA replication and repair protein recF gi|254790475|sp|B7UMG7|RECF_ECO27 RecName: Full=DNA replication and repair protein recF gi|254790476|sp|B7L842|RECF_ECO55 RecName: Full=DNA replication and repair protein recF gi|254790477|sp|B7N204|RECF_ECO81 RecName: Full=DNA replication and repair protein recF gi|259563362|sp|C4ZYX7|RECF_ECOBW RecName: Full=DNA replication and repair protein recF gi|12518539|gb|AAG58897.1|AE005601_3 ssDNA and dsDNA binding, ATP binding [Escherichia coli O157:H7 str. EDL933] gi|26110871|gb|AAN83055.1|AE016769_170 DNA replication and repair protein recF [Escherichia coli CFT073] gi|41645|emb|CAA27870.1| unnamed protein product [Escherichia coli K-12] gi|147539|gb|AAA24511.1| RecF [Escherichia coli] gi|1790135|gb|AAC76723.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|13364110|dbj|BAB38058.1| DNA repair and genetic recombination protein RecF [Escherichia coli O157:H7 str. Sakai] gi|73857491|gb|AAZ90198.1| ssDNA and dsDNA binding protein [Shigella sonnei Ss046] gi|85676344|dbj|BAE77594.1| gap repair protein [Escherichia coli str. K12 substr. W3110] gi|91074796|gb|ABE09677.1| ssDNA and dsDNA binding, ATP binding [Escherichia coli UTI89] gi|115515100|gb|ABJ03175.1| recombination protein F [Escherichia coli APEC O1] gi|157068860|gb|ABV08115.1| DNA replication and repair protein RecF [Escherichia coli HS] gi|157078019|gb|ABV17727.1| DNA replication and repair protein RecF [Escherichia coli E24377A] gi|169752992|gb|ACA75691.1| DNA replication and repair protein RecF [Escherichia coli ATCC 8739] gi|169891037|gb|ACB04744.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|170521913|gb|ACB20091.1| DNA replication and repair protein RecF [Escherichia coli SMS-3-5] gi|187771421|gb|EDU35265.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4196] gi|188016945|gb|EDU55067.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4113] gi|189002585|gb|EDU71571.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4076] gi|189358910|gb|EDU77329.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4401] gi|189364573|gb|EDU82992.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4486] gi|189369691|gb|EDU88107.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4501] gi|189378816|gb|EDU97232.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC508] gi|190904119|gb|EDV63830.1| DNA replication and repair protein RecF [Escherichia coli B7A] gi|192957518|gb|EDV87964.1| DNA replication and repair protein RecF [Escherichia coli E110019] gi|194425324|gb|EDX41308.1| DNA replication and repair protein RecF [Escherichia coli 101-1] gi|208728702|gb|EDZ78303.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4206] gi|208735302|gb|EDZ83989.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4045] gi|208739431|gb|EDZ87113.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4042] gi|209158895|gb|ACI36328.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. EC4115] gi|209754128|gb|ACI75371.1| DNA polymerase III beta-subunit [Escherichia coli] gi|209754130|gb|ACI75372.1| DNA polymerase III beta-subunit [Escherichia coli] gi|209754132|gb|ACI75373.1| DNA polymerase III beta-subunit [Escherichia coli] gi|209754134|gb|ACI75374.1| DNA polymerase III beta-subunit [Escherichia coli] gi|209754136|gb|ACI75375.1| DNA polymerase III beta-subunit [Escherichia coli] gi|215267112|emb|CAS11559.1| gap repair protein [Escherichia coli O127:H6 str. E2348/69] gi|217321117|gb|EEC29541.1| DNA replication and repair protein RecF [Escherichia coli O157:H7 str. TW14588] gi|218354154|emb|CAV00754.1| gap repair protein [Escherichia coli 55989] gi|218363034|emb|CAR00673.1| gap repair protein [Escherichia coli IAI1] gi|218367544|emb|CAR05329.1| gap repair protein [Escherichia coli S88] gi|218429552|emb|CAR10375.1| gap repair protein [Escherichia coli ED1a] gi|218434443|emb|CAR15371.1| gap repair protein [Escherichia coli UMN026] gi|222035414|emb|CAP78159.1| DNA replication and repair protein recF [Escherichia coli LF82] gi|226838882|gb|EEH70909.1| ssDNA and dsDNA binding protein [Escherichia sp. 1_1_43] gi|226902764|gb|EEH89023.1| recombination protein F [Escherichia sp. 3_2_53FAA] gi|227839199|gb|EEJ49665.1| recombination protein F [Escherichia coli 83972] gi|238861285|gb|ACR63283.1| gap repair protein [Escherichia coli BW2952] gi|242379239|emb|CAQ34044.1| ssDNA and dsDNA binding, ATP binding, subunit of RecFOR complex [Escherichia coli BL21(DE3)] gi|253322482|gb|ACT27084.1| DNA replication and repair protein RecF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975552|gb|ACT41223.1| recombination protein F [Escherichia coli B str. REL606] gi|253979708|gb|ACT45378.1| recombination protein F [Escherichia coli BL21(DE3)] gi|254595103|gb|ACT74464.1| gap repair protein [Escherichia coli O157:H7 str. TW14359] gi|257756538|dbj|BAI28040.1| gap repair protein RecF [Escherichia coli O26:H11 str. 11368] gi|257766787|dbj|BAI38282.1| gap repair protein RecF [Escherichia coli O111:H- str. 11128] gi|260447282|gb|ACX37704.1| DNA replication and repair protein RecF [Escherichia coli DH1] gi|281180754|dbj|BAI57084.1| DNA replication and repair protein RecF [Escherichia coli SE15] gi|284923783|emb|CBG36881.1| DNA replication and repair protein [Escherichia coli 042] gi|290764992|gb|ADD58953.1| DNA replication and repair protein recF [Escherichia coli O55:H7 str. CB9615] gi|291321656|gb|EFE61092.1| DNA replication and repair protein recF [Escherichia coli B088] gi|291425631|gb|EFE98667.1| DNA replication and repair protein recF [Escherichia coli FVEC1412] gi|291431204|gb|EFF04197.1| DNA replication and repair protein recF [Escherichia coli B185] gi|291468287|gb|EFF10782.1| conserved hypothetical protein [Escherichia coli B354] gi|294492502|gb|ADE91258.1| DNA replication and repair protein RecF [Escherichia coli IHE3034] gi|298276917|gb|EFI18435.1| DNA replication and repair protein recF [Escherichia coli FVEC1302] gi|299878455|gb|EFI86666.1| recombination protein F [Escherichia coli MS 196-1] gi|300300578|gb|EFJ56963.1| recombination protein F [Escherichia coli MS 185-1] gi|300316881|gb|EFJ66665.1| recombination protein F [Escherichia coli MS 175-1] gi|300360089|gb|EFJ75959.1| recombination protein F [Escherichia coli MS 198-1] gi|300398378|gb|EFJ81916.1| recombination protein F [Escherichia coli MS 69-1] gi|300404931|gb|EFJ88469.1| recombination protein F [Escherichia coli MS 84-1] gi|300408375|gb|EFJ91913.1| recombination protein F [Escherichia coli MS 45-1] gi|300415274|gb|EFJ98584.1| recombination protein F [Escherichia coli MS 115-1] gi|300418364|gb|EFK01675.1| recombination protein F [Escherichia coli MS 182-1] gi|300452876|gb|EFK16496.1| recombination protein F [Escherichia coli MS 116-1] gi|300454366|gb|EFK17859.1| recombination protein F [Escherichia coli MS 21-1] gi|300459917|gb|EFK23410.1| recombination protein F [Escherichia coli MS 187-1] gi|300523202|gb|EFK44271.1| recombination protein F [Escherichia coli MS 119-7] gi|300531945|gb|EFK53007.1| recombination protein F [Escherichia coli MS 107-1] gi|300838805|gb|EFK66565.1| recombination protein F [Escherichia coli MS 124-1] gi|300848102|gb|EFK75862.1| recombination protein F [Escherichia coli MS 78-1] gi|305850343|gb|EFM50800.1| recombination protein F [Escherichia coli NC101] gi|306906914|gb|EFN37423.1| DNA replication and repair protein RecF [Escherichia coli W] gi|307555840|gb|ADN48615.1| DNA replication and repair protein RecF [Escherichia coli ABU 83972] gi|307628776|gb|ADN73080.1| recombination protein F [Escherichia coli UM146] gi|309704147|emb|CBJ03494.1| DNA replication and repair protein [Escherichia coli ETEC H10407] gi|310334385|gb|EFQ00590.1| DNA replication and repair protein recF [Escherichia coli 1827-70] gi|312948267|gb|ADR29094.1| recombination protein F [Escherichia coli O83:H1 str. NRG 857C] gi|315063006|gb|ADT77333.1| gap repair protein [Escherichia coli W] gi|315138284|dbj|BAJ45443.1| DNA replication and repair protein recF [Escherichia coli DH1] gi|315254613|gb|EFU34581.1| recombination protein F [Escherichia coli MS 85-1] gi|315285495|gb|EFU44940.1| recombination protein F [Escherichia coli MS 110-3] gi|315292858|gb|EFU52210.1| recombination protein F [Escherichia coli MS 153-1] gi|315296898|gb|EFU56186.1| recombination protein F [Escherichia coli MS 16-3] gi|315618594|gb|EFU99180.1| DNA replication and repair protein recF [Escherichia coli 3431] gi|320191200|gb|EFW65850.1| DNA recombination and repair protein RecF [Escherichia coli O157:H7 str. EC1212] gi|320193754|gb|EFW68387.1| DNA recombination and repair protein RecF [Escherichia coli WV_060327] gi|320201272|gb|EFW75853.1| DNA recombination and repair protein RecF [Escherichia coli EC4100B] gi|320639425|gb|EFX09040.1| recombination protein F [Escherichia coli O157:H7 str. G5101] gi|320644868|gb|EFX13904.1| recombination protein F [Escherichia coli O157:H- str. 493-89] gi|320650132|gb|EFX18628.1| recombination protein F [Escherichia coli O157:H- str. H 2687] gi|320655480|gb|EFX23415.1| recombination protein F [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661106|gb|EFX28542.1| recombination protein F [Escherichia coli O55:H7 str. USDA 5905] gi|320666232|gb|EFX33238.1| recombination protein F [Escherichia coli O157:H7 str. LSU-61] gi|323155376|gb|EFZ41559.1| DNA replication and repair protein recF [Escherichia coli EPECa14] gi|323164688|gb|EFZ50483.1| DNA replication and repair protein recF [Shigella sonnei 53G] gi|323173318|gb|EFZ58947.1| DNA replication and repair protein recF [Escherichia coli LT-68] gi|323177712|gb|EFZ63296.1| DNA replication and repair protein recF [Escherichia coli 1180] gi|323182495|gb|EFZ67899.1| DNA replication and repair protein recF [Escherichia coli 1357] gi|323189565|gb|EFZ74845.1| DNA replication and repair protein recF [Escherichia coli RN587/1] gi|323376400|gb|ADX48668.1| DNA replication and repair protein RecF [Escherichia coli KO11] gi|323934949|gb|EGB31327.1| DNA replication and repair protein RecF [Escherichia coli E1520] gi|323939116|gb|EGB35330.1| DNA replication and repair protein RecF [Escherichia coli E482] gi|323944172|gb|EGB40252.1| DNA replication and repair protein RecF [Escherichia coli H120] gi|323949943|gb|EGB45827.1| DNA replication and repair protein RecF [Escherichia coli H252] gi|323955006|gb|EGB50784.1| DNA replication and repair protein RecF [Escherichia coli H263] gi|323959765|gb|EGB55415.1| DNA replication and repair protein RecF [Escherichia coli H489] gi|323971177|gb|EGB66423.1| DNA replication and repair protein RecF [Escherichia coli TA007] gi|324008036|gb|EGB77255.1| recombination protein F [Escherichia coli MS 57-2] gi|326337251|gb|EGD61086.1| DNA recombination and repair protein RecF [Escherichia coli O157:H7 str. 1044] gi|326341622|gb|EGD65411.1| DNA recombination and repair protein RecF [Escherichia coli O157:H7 str. 1125] gi|331036718|gb|EGI08944.1| DNA replication and repair protein RecF [Escherichia coli H736] gi|331042024|gb|EGI14168.1| DNA replication and repair protein RecF [Escherichia coli M605] gi|331047375|gb|EGI19453.1| DNA replication and repair protein RecF [Escherichia coli M718] gi|331053257|gb|EGI25290.1| DNA replication and repair protein RecF [Escherichia coli TA206] gi|331057860|gb|EGI29846.1| DNA replication and repair protein RecF [Escherichia coli TA143] gi|331067635|gb|EGI39037.1| DNA replication and repair protein RecF [Escherichia coli TA280] gi|331072970|gb|EGI44295.1| DNA replication and repair protein RecF [Escherichia coli H591] gi|331077795|gb|EGI49007.1| DNA replication and repair protein RecF [Escherichia coli H299] Length = 357 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|308270276|emb|CBX26888.1| hypothetical protein N47_A09170 [uncultured Desulfobacterium sp.] Length = 1231 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MRILQVRFKNLNSLAGEWEIDLTHPAFASDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|307105686|gb|EFN53934.1| hypothetical protein CHLNCDRAFT_58396 [Chlorella variabilis] Length = 1348 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ HF T + I+ ++ ++ G NG GKS++ +A++ ++K Sbjct: 240 VKRVELQHFMCHTHLA-IDLCPNVNLLTGANGSGKSAVLQALQCCLGARASDTGRYRAMK 298 Query: 89 KRSIK 93 K + Sbjct: 299 KFVQR 303 >gi|300718002|ref|YP_003742805.1| recombination and DNA repair protein [Erwinia billingiae Eb661] gi|299063838|emb|CAX60958.1| recombination and DNA repair protein [Erwinia billingiae Eb661] Length = 553 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|190341561|gb|ACE74857.1| RecN [Enterobacter radicincitans] Length = 553 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|188533122|ref|YP_001906919.1| recombination and repair protein [Erwinia tasmaniensis Et1/99] gi|188028164|emb|CAO96022.1| Protein used in recombination and DNA repair (DNA repair protein RecN) [Erwinia tasmaniensis Et1/99] Length = 553 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQRGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|315586360|gb|ADU40741.1| conserved hypothetical protein [Helicobacter pylori 35A] Length = 394 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEAL-YCLVG 47 >gi|290890415|ref|ZP_06553490.1| hypothetical protein AWRIB429_0880 [Oenococcus oeni AWRIB429] gi|290479811|gb|EFD88460.1| hypothetical protein AWRIB429_0880 [Oenococcus oeni AWRIB429] Length = 821 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I IS F F++ ++F + L ++ GQN GKS+L + I + +G+ Q ++ + Sbjct: 1 MEIKRIHISGFGKFSDFN-LDFKNDLQVIYGQNEAGKSTLRQFITGILFGFAQNKRQSSN 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|229060010|ref|ZP_04197381.1| Exonuclease [Bacillus cereus AH603] gi|228719229|gb|EEL70837.1| Exonuclease [Bacillus cereus AH603] Length = 1022 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D+ Sbjct: 1 MTAFGPYKQKEVIDFKDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTNML 60 Query: 90 RSI 92 RS Sbjct: 61 RSQ 63 >gi|134300660|ref|YP_001114156.1| SMC domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053360|gb|ABO51331.1| SMC domain protein [Desulfotomaculum reducens MI-1] Length = 250 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+ EI F+ + + ++F +T + G+NG GKS+L EAI F Sbjct: 13 IELIREEIDSFKKYPYCLPAVKTLSTLDFHPRVTFIVGENGTGKSTLLEAIAIAFG 68 >gi|116490941|ref|YP_810485.1| DNA repair ATPase [Oenococcus oeni PSU-1] gi|116091666|gb|ABJ56820.1| DNA repair ATPase [Oenococcus oeni PSU-1] Length = 821 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ I IS F F++ ++F + L ++ GQN GKS+L + I + +G+ Q ++ + Sbjct: 1 MEIKRIHISGFGKFSDFN-LDFKNDLQVIYGQNEAGKSTLRQFITGILFGFAQNKRQSSN 59 Query: 87 I 87 + Sbjct: 60 L 60 >gi|325120015|emb|CBZ55568.1| DEHA2A05324p, related [Neospora caninum Liverpool] Length = 1420 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHGDS 86 +LL + + ++ +T ++ F + ++ NG GKSSL A+ + Y + G Sbjct: 52 QLLQLRLENWMAYTGPVEVNFLTGINLLAAPNGAGKSSLLCAMAFGLGYDVAHISRRGSR 111 Query: 87 IKK 89 ++ Sbjct: 112 LRD 114 >gi|308479597|ref|XP_003102007.1| hypothetical protein CRE_07628 [Caenorhabditis remanei] gi|308262387|gb|EFP06340.1| hypothetical protein CRE_07628 [Caenorhabditis remanei] Length = 331 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 Q +EF + L + G NG GK++L +AI++ Sbjct: 20 QTLEFENGLNAIEGYNGSGKTTLLKAIKYCL 50 >gi|253700396|ref|YP_003021585.1| DNA repair protein RecN [Geobacter sp. M21] gi|251775246|gb|ACT17827.1| DNA repair protein RecN [Geobacter sp. M21] Length = 553 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++I++ E +EFA L I+ G+ G GKS + +A+ + G K Sbjct: 2 LRELQITNL-AIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAK 60 Query: 89 KRSIK 93 + S++ Sbjct: 61 EASVE 65 >gi|171184971|ref|YP_001793890.1| SMC domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934183|gb|ACB39444.1| SMC domain protein [Thermoproteus neutrophilus V24Sta] Length = 349 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++E+ +FRG E +FA + I G+NG GKSS+ EA+ Sbjct: 9 VRELEVKNFRGVREGSIKDFA-AVNIFVGRNGTGKSSILEALYIAL 53 >gi|77919920|ref|YP_357735.1| DNA repair protein RecN [Pelobacter carbinolicus DSM 2380] gi|77546003|gb|ABA89565.1| DNA replication and repair protein RecN [Pelobacter carbinolicus DSM 2380] Length = 560 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L D+ I HF + + F D +++ G+ G GKS + +A+ + G Sbjct: 2 LTDLHIRHF-AIIDRLHVSFCDGFSVLTGETGAGKSIIIDAVALILGG 48 >gi|78222162|ref|YP_383909.1| DNA repair protein RecN [Geobacter metallireducens GS-15] gi|78193417|gb|ABB31184.1| DNA replication and repair protein RecN [Geobacter metallireducens GS-15] Length = 554 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+D+ I +F + + F LT+ G+ G GKS + +A+ + G R D I+ Sbjct: 2 LIDLSIRNF-AIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGG----RASADLIR 56 Query: 89 KRSIKTPMPMCMAVP 103 + + + A+P Sbjct: 57 TGAEEATVEAVFALP 71 >gi|327393039|dbj|BAK10461.1| ATPase [Pantoea ananatis AJ13355] Length = 368 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I + FR ++ L +V+G NG GKS+L +A+ Sbjct: 1 MTIKQIHLRGFRSVRDLTLP--LQQLNVVSGPNGCGKSNLYKAVR 43 >gi|325297260|ref|YP_004257177.1| DNA replication and repair protein recF [Bacteroides salanitronis DSM 18170] gi|324316813|gb|ADY34704.1| DNA replication and repair protein recF [Bacteroides salanitronis DSM 18170] Length = 372 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++ F+ L + G+NG GK++L +A+ +L + + Sbjct: 1 MWLKRISILNYKNL-EQVELAFSKKLNCIIGKNGMGKTNLMDAVYYLSFCKSATN 54 >gi|300118617|ref|ZP_07056355.1| hypothetical protein BCSJ1_14975 [Bacillus cereus SJ1] gi|298724006|gb|EFI64710.1| hypothetical protein BCSJ1_14975 [Bacillus cereus SJ1] Length = 671 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I HFR F + Q I F +T++ G+NG GK+ + + + YG Sbjct: 1 MLIQKITFHHFRQFYDTQSITFAGVDNERLVTVILGENGRGKTGIYRGLLFGLYG 55 >gi|291616611|ref|YP_003519353.1| Hypothetical Protein PANA_1058 [Pantoea ananatis LMG 20103] gi|291151641|gb|ADD76225.1| Hypothetical Protein PANA_1058 [Pantoea ananatis LMG 20103] Length = 370 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I + FR ++ L +V+G NG GKS+L +A+ Sbjct: 3 MTIKQIHLRGFRSVRDLTLP--LQQLNVVSGPNGCGKSNLYKAVR 45 >gi|212550984|ref|YP_002309301.1| DNA replication and repair protein RecF [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|259563354|sp|B6YRR8|RECF_AZOPC RecName: Full=DNA replication and repair protein recF gi|212549222|dbj|BAG83890.1| DNA replication and repair protein RecF [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 366 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I +F+ E + F+ + + G NG GK++L +A+ +L + + Sbjct: 3 IEIVTILNFKNI-EEGSLSFSPKINYLLGDNGMGKTNLLDALYYLAFTKNHTNLTDSQLI 61 >gi|110800023|ref|YP_696498.1| DNA repair protein RecN [Clostridium perfringens ATCC 13124] gi|168210822|ref|ZP_02636447.1| DNA repair protein RecN [Clostridium perfringens B str. ATCC 3626] gi|110674670|gb|ABG83657.1| DNA repair protein RecN [Clostridium perfringens ATCC 13124] gi|170711155|gb|EDT23337.1| DNA repair protein RecN [Clostridium perfringens B str. ATCC 3626] Length = 565 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|260063109|ref|YP_003196189.1| DNA repair protein RecN [Robiginitalea biformata HTCC2501] gi|88784678|gb|EAR15848.1| DNA repair protein RecN [Robiginitalea biformata HTCC2501] Length = 551 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 38 RGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 R + E +++F LT + G+ G GKS L E++ + R D+ KK ++ Sbjct: 8 RNYALIEDLRVDFKGGLTTITGETGAGKSILLESLGLVLGNRADRSALRDTEKKCVVEAE 67 >gi|302672055|ref|YP_003832015.1| hypothetical protein bpr_I2700 [Butyrivibrio proteoclasticus B316] gi|302396528|gb|ADL35433.1| hypothetical protein bpr_I2700 [Butyrivibrio proteoclasticus B316] Length = 374 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + IEI+ FR ++ F+ ++ ++ G N GK++L EAI+ LF Sbjct: 3 YIKSIEINQFRSIKKLSVSGFS-NINLIVGDNNSGKTTLLEAIQLLF 48 >gi|162453294|ref|YP_001615661.1| hypothetical protein sce5018 [Sorangium cellulosum 'So ce 56'] gi|161163876|emb|CAN95181.1| hypothetical protein sce5018 [Sorangium cellulosum 'So ce 56'] Length = 361 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + + F+G + + T++ G NG GK+S+ EA+ W Sbjct: 2 ITSVHLHDFKGHRDST-VPLG-QFTVLVGPNGSGKTSVLEAL-WA 43 >gi|88857659|ref|ZP_01132302.1| exonuclease SbcC [Pseudoalteromonas tunicata D2] gi|88820856|gb|EAR30668.1| exonuclease SbcC [Pseudoalteromonas tunicata D2] Length = 1232 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + KI+F + L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRFKNINSLKGEWKIDFTQPPFANNGLFAITGPTGAGKTTLLDAICMALYHRTPR 60 >gi|329963204|ref|ZP_08300941.1| hypothetical protein HMPREF9446_02534 [Bacteroides fluxus YIT 12057] gi|328528900|gb|EGF55840.1| hypothetical protein HMPREF9446_02534 [Bacteroides fluxus YIT 12057] Length = 615 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAI 70 + IEI F+ F I+ D + + G+NG GKSSL A+ Sbjct: 4 ITKIEIDGFKAFPNNFSIDLPDGKNLLIYGENGSGKSSLYYAL 46 >gi|313885343|ref|ZP_07819094.1| hypothetical protein HMPREF9257_1682 [Eremococcus coleocola ACS-139-V-Col8] gi|312619449|gb|EFR30887.1| hypothetical protein HMPREF9257_1682 [Eremococcus coleocola ACS-139-V-Col8] Length = 942 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI + + Q + DHL + G+N GKS+L I + +G+ +R+ + Sbjct: 1 MKIKRLEIYGYGKWV-NQTFDINDHLQLFYGKNESGKSTLQSFIRSILFGFPDKRRRKNQ 59 Query: 87 IKK 89 + + Sbjct: 60 VNR 62 >gi|291459745|ref|ZP_06599135.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417535|gb|EFE91254.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 474 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 11/75 (14%) Query: 23 RKLIFKLLDIEISHFR-------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-- 73 + + +L + I +F+ F +K + + + GQNG GK++L +AIE L Sbjct: 2 KNTVVRLESLSIENFKNIKAGQLSFANSRK-AYKTSILGLYGQNGSGKTALIDAIELLQL 60 Query: 74 -FYGYTQRRKHGDSI 87 G T K D I Sbjct: 61 ALKGQTVPAKFADYI 75 >gi|269976230|ref|ZP_06183226.1| putative abortive infection protein [Mobiluncus mulieris 28-1] gi|306817648|ref|ZP_07451391.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|269935559|gb|EEZ92097.1| putative abortive infection protein [Mobiluncus mulieris 28-1] gi|304649690|gb|EFM46972.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length = 458 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 18/67 (26%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------------------LTIVNGQNGYGKSSLSE 68 ++L + +FR E Q I+F +TI+ G N GKS++ + Sbjct: 1 MRILFFSVKNFRSVDETQTIDFVKGRVGGSPLVKGGWEPHVRPVTILMGPNAAGKSNVID 60 Query: 69 AIEWLFY 75 A+ ++ Sbjct: 61 AMGYVTT 67 >gi|228992763|ref|ZP_04152689.1| ABC transporter, ATP-binding protein [Bacillus pseudomycoides DSM 12442] gi|228767095|gb|EEM15732.1| ABC transporter, ATP-binding protein [Bacillus pseudomycoides DSM 12442] Length = 250 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I +F + +Q ++F ++T + G+NG GKS+L EA+ + Sbjct: 11 VSLQKEHIPNFSVYPYCLPAIRTLQSLDFHPNVTFIIGENGTGKSTLLEALAIALGFNAE 70 >gi|228998809|ref|ZP_04158395.1| ABC transporter, ATP-binding protein [Bacillus mycoides Rock3-17] gi|229006324|ref|ZP_04164008.1| ABC transporter, ATP-binding protein [Bacillus mycoides Rock1-4] gi|228754970|gb|EEM04331.1| ABC transporter, ATP-binding protein [Bacillus mycoides Rock1-4] gi|228760984|gb|EEM09944.1| ABC transporter, ATP-binding protein [Bacillus mycoides Rock3-17] Length = 250 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I +F + +Q ++F ++T + G+NG GKS+L EA+ + Sbjct: 11 VSLQKEHIPNFSVYPYCLPAIRTLQSLDFHPNVTFIIGENGTGKSTLLEALAIALGFNAE 70 >gi|255071309|ref|XP_002507736.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299] gi|226523011|gb|ACO68994.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299] Length = 1319 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F+ I F LT++ G+NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFSPDNDHAIIFPKPLTLIVGRNGAGKTTVIECLKMATTG 53 >gi|312892157|ref|ZP_07751654.1| DNA replication and repair protein RecF [Mucilaginibacter paludis DSM 18603] gi|311295287|gb|EFQ72459.1| DNA replication and repair protein RecF [Mucilaginibacter paludis DSM 18603] Length = 366 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + +F+ +T+ + I + G NG GK++L +A+ +L Sbjct: 1 MYLKQLSLLNFKNYTQAEII-LEPGVNAFAGNNGAGKTNLLDAVHYL 46 >gi|331654552|ref|ZP_08355552.1| conserved hypothetical protein [Escherichia coli M718] gi|331047934|gb|EGI20011.1| conserved hypothetical protein [Escherichia coli M718] Length = 731 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 11/78 (14%) Query: 32 IEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + I R + + +EF + ++T++ GQNG GKS++S GY + D + Sbjct: 4 LSIHGVRSYQGERPVEFDLSKYVTLIYGQNGSGKSTVS--------GYFYKHGRPDY-SQ 54 Query: 90 RSIKTPMPMCMAVPRCKY 107 S++ P+ M V +Y Sbjct: 55 CSLRPPLDMNYLVFNQEY 72 >gi|322419814|ref|YP_004199037.1| DNA repair protein RecN [Geobacter sp. M18] gi|320126201|gb|ADW13761.1| DNA repair protein RecN [Geobacter sp. M18] Length = 553 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++I++ + +EF+ L I+ G+ G GKS + +A+ + G K Sbjct: 2 LRELQITNL-AIIDKLHVEFSPGLNILTGETGAGKSIIIDAVNLILGGRGSADLIRSGAK 60 Query: 89 KRSIK 93 + S++ Sbjct: 61 EASVE 65 >gi|251791113|ref|YP_003005834.1| AAA ATPase [Dickeya zeae Ech1591] gi|247539734|gb|ACT08355.1| AAA ATPase [Dickeya zeae Ech1591] Length = 573 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 I KL I+I +FRG + ++ AD +TIV G+NG KS++ I +F Sbjct: 5 ITKLKSIDIKNFRGLSG-VSLDIADRITIVCGKNGTSKSTILGIIAQVF 52 >gi|227432101|ref|ZP_03914113.1| DNA repair protein RecN [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352128|gb|EEJ42342.1| DNA repair protein RecN [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 559 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L ++ I +F E ++F + ++++ G+ G GKS + +A+ L G R + + Sbjct: 3 LLMLENLIIENF-AIIEKVDLQFEEGMSVLTGETGAGKSIIIDALFMLTGG----RANSE 57 Query: 86 SIKKRSIKTPMPMCMAVP 103 ++ S K + +VP Sbjct: 58 MVRHGSKKAVLQAVFSVP 75 >gi|298499525|ref|ZP_07009331.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|297541506|gb|EFH77557.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 547 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 10/56 (17%) Query: 29 LLDIEISHFRGFT-----EIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I + +F+G+ ++++F A L +V G+NG GK+SL EA++W+ Sbjct: 8 IQSIGLENFKGYRALEDGGPKELDFTIAGQAADLILVTGKNGVGKTSLLEAMDWVL 63 >gi|295425227|ref|ZP_06817930.1| DNA repair protein RecN [Lactobacillus amylolyticus DSM 11664] gi|295065003|gb|EFG55908.1| DNA repair protein RecN [Lactobacillus amylolyticus DSM 11664] Length = 562 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F +H+T++ G+ G GKS L +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKALKVRFQEHMTVLIGETGAGKSILIDAVSLLMGGRGQKEM 54 >gi|326204928|ref|ZP_08194781.1| DNA sulfur modification protein DndD [Clostridium papyrosolvens DSM 2782] gi|325984977|gb|EGD45820.1| DNA sulfur modification protein DndD [Clostridium papyrosolvens DSM 2782] Length = 727 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ I+I + F +Q+ +F + ++ G NG GK+SL AI+ YG Sbjct: 1 MKINGIKICNISSFVGVQEFDFTVTDKKSVVLIGGLNGTGKTSLFTAIKLALYG 54 >gi|226303493|ref|YP_002763451.1| DNA replication and repair protein RecF [Rhodococcus erythropolis PR4] gi|259563669|sp|C0ZLE4|RECF_RHOE4 RecName: Full=DNA replication and repair protein recF gi|226182608|dbj|BAH30712.1| DNA replication and repair protein RecF [Rhodococcus erythropolis PR4] Length = 409 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + ++ T+ G NG+GK+++ E++ +L + R Sbjct: 1 MFVRRFSLRDFRSW-DSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSTDAP 59 Query: 87 IKKRSI 92 + + Sbjct: 60 MIRSGS 65 >gi|218134380|ref|ZP_03463184.1| hypothetical protein BACPEC_02274 [Bacteroides pectinophilus ATCC 43243] gi|217989765|gb|EEC55776.1| hypothetical protein BACPEC_02274 [Bacteroides pectinophilus ATCC 43243] Length = 358 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +R + E+ IE +D I+ G N GK+++ E++ + R + Sbjct: 3 VKSINLKDYRNY-ELLNIELSDKTNIIYGDNAQGKTNILESMYVGATTKSHRGSKDKELI 61 Query: 89 KRSIK 93 + Sbjct: 62 RFGCD 66 >gi|170780467|ref|YP_001708799.1| recombination protein F [Clavibacter michiganensis subsp. sepedonicus] gi|189039619|sp|B0RH73|RECF_CLAMS RecName: Full=DNA replication and repair protein recF gi|169155035|emb|CAQ00131.1| DNA replication protein [Clavibacter michiganensis subsp. sepedonicus] Length = 408 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + FR +T + T+ G NG GK++L EA+ +L + R ++ Sbjct: 3 VRHLSLGDFRNYT-RADVALLPGATLFVGSNGQGKTNLVEALGFLSTLGSHRVSTDQALV 61 Query: 89 KRSIKT 94 ++ ++ Sbjct: 62 RQGAES 67 >gi|168206131|ref|ZP_02632136.1| DNA repair protein RecN [Clostridium perfringens E str. JGS1987] gi|182625689|ref|ZP_02953458.1| DNA repair protein RecN [Clostridium perfringens D str. JGS1721] gi|170662392|gb|EDT15075.1| DNA repair protein RecN [Clostridium perfringens E str. JGS1987] gi|177909091|gb|EDT71566.1| DNA repair protein RecN [Clostridium perfringens D str. JGS1721] Length = 565 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|169343803|ref|ZP_02864802.1| DNA repair protein RecN [Clostridium perfringens C str. JGS1495] gi|169298363|gb|EDS80453.1| DNA repair protein RecN [Clostridium perfringens C str. JGS1495] Length = 565 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|167644130|ref|YP_001681793.1| recombination protein F [Caulobacter sp. K31] gi|259563357|sp|B0T360|RECF_CAUSK RecName: Full=DNA replication and repair protein recF gi|167346560|gb|ABZ69295.1| SMC domain protein [Caulobacter sp. K31] Length = 392 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + ++ FR + E + + G NG GK++L EAI L G + G S+ Sbjct: 6 LLSLTLTDFRSY-ERATLRPDGASVYLFGANGAGKTNLLEAISLLSPG---KGLRGSSLI 61 Query: 89 KRSIKTPMP 97 + + P Sbjct: 62 EVGRRLPGE 70 >gi|110802669|ref|YP_699098.1| DNA repair protein RecN [Clostridium perfringens SM101] gi|110683170|gb|ABG86540.1| DNA repair protein RecN [Clostridium perfringens SM101] Length = 565 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|15601484|ref|NP_233115.1| hypothetical protein VCA0728 [Vibrio cholerae O1 biovar eltor str. N16961] gi|121585611|ref|ZP_01675407.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153819427|ref|ZP_01972094.1| hypothetical protein A5C_A0913 [Vibrio cholerae NCTC 8457] gi|153820656|ref|ZP_01973323.1| hypothetical protein A5E_A0734 [Vibrio cholerae B33] gi|227812295|ref|YP_002812305.1| hypothetical protein VCM66_A0686 [Vibrio cholerae M66-2] gi|229506114|ref|ZP_04395623.1| hypothetical protein VCF_001328 [Vibrio cholerae BX 330286] gi|229510029|ref|ZP_04399509.1| hypothetical protein VCE_001430 [Vibrio cholerae B33] gi|229516410|ref|ZP_04405857.1| hypothetical protein VCC_000425 [Vibrio cholerae RC9] gi|229605645|ref|YP_002876349.1| hypothetical protein VCD_000591 [Vibrio cholerae MJ-1236] gi|254849886|ref|ZP_05239236.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255746510|ref|ZP_05420457.1| hypothetical protein VCH_002898 [Vibrio cholera CIRS 101] gi|262158903|ref|ZP_06030016.1| hypothetical protein VIG_002141 [Vibrio cholerae INDRE 91/1] gi|9658149|gb|AAF96627.1| hypothetical protein VC_A0728 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550228|gb|EAX60242.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|126510035|gb|EAZ72629.1| hypothetical protein A5C_A0913 [Vibrio cholerae NCTC 8457] gi|126521699|gb|EAZ78922.1| hypothetical protein A5E_A0734 [Vibrio cholerae B33] gi|227011437|gb|ACP07648.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229346291|gb|EEO11262.1| hypothetical protein VCC_000425 [Vibrio cholerae RC9] gi|229352474|gb|EEO17414.1| hypothetical protein VCE_001430 [Vibrio cholerae B33] gi|229356465|gb|EEO21383.1| hypothetical protein VCF_001328 [Vibrio cholerae BX 330286] gi|229372131|gb|ACQ62553.1| hypothetical protein VCD_000591 [Vibrio cholerae MJ-1236] gi|254845591|gb|EET24005.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255736264|gb|EET91662.1| hypothetical protein VCH_002898 [Vibrio cholera CIRS 101] gi|262029476|gb|EEY48127.1| hypothetical protein VIG_002141 [Vibrio cholerae INDRE 91/1] Length = 723 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 10/56 (17%) Query: 29 LLDIEISHFRGFT-----EIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I + +F+G+ ++++F A L +V G+NG GK+SL EA++W+ Sbjct: 8 IQSIGLENFKGYRALEDGGPKELDFTIAGQAADLILVTGKNGVGKTSLLEAMDWVL 63 >gi|312877327|ref|ZP_07737293.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795890|gb|EFR12253.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 735 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I +++ + +KI+F ++ G+N GKS++ +A+E L Sbjct: 1 MYVSELYIVNYKSI-KKEKIKFNPGKNVLVGKNNAGKSNIIKALELLLGE 49 >gi|289641529|ref|ZP_06473691.1| ATPase involved in DNA repair-like protein [Frankia symbiont of Datisca glomerata] gi|289508624|gb|EFD29561.1| ATPase involved in DNA repair-like protein [Frankia symbiont of Datisca glomerata] Length = 1229 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +E++ F F + +++F L ++ G+ G GK++L +A+ + YG Sbjct: 1 MRPHRLELAAFGAFPDKIELDFDRLGAGSLVLLCGETGGGKTTLLDALGFALYG 54 >gi|323342883|ref|ZP_08083115.1| hypothetical protein HMPREF0357_11296 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463995|gb|EFY09189.1| hypothetical protein HMPREF0357_11296 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 1021 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 32 IEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + F + E ++F L ++ G G GK++L +AI + Y + Sbjct: 6 LSMRAFGPYFEETTVDFTQFHQGLFLITGDTGAGKTTLFDAISFALYDVASGSQR 60 >gi|121607284|ref|YP_995091.1| AAA ATPase [Verminephrobacter eiseniae EF01-2] gi|121551924|gb|ABM56073.1| AAA ATPase [Verminephrobacter eiseniae EF01-2] Length = 378 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGDSI 87 L ++I +F+ F + Q+IE +H ++ G N GK+S +A+ W T DS Sbjct: 4 LHYLDIENFKRFGKRQRIEL-NHPAVLIGPNNCGKTSAIQALALWSQGVKTWYDARRDSS 62 Query: 88 KKRSIKT 94 K+ T Sbjct: 63 AKQRTAT 69 >gi|134299591|ref|YP_001113087.1| hypothetical protein Dred_1737 [Desulfotomaculum reducens MI-1] gi|134052291|gb|ABO50262.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1] Length = 617 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K+L +++ GF + + I F HL + G G GK+++ E + + Y Sbjct: 8 KILSLKVQG--GFLDGEVIHFNPHLNCLIGGRGSGKTTVIEMLRFALDAY 55 >gi|330945986|gb|EGH47295.1| exonuclease SbcC [Pseudomonas syringae pv. pisi str. 1704B] Length = 128 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|312793802|ref|YP_004026725.1| SMC domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180942|gb|ADQ41112.1| SMC domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 735 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I +++ + +KI+F ++ G+N GKS++ +A+E L Sbjct: 1 MYVSELYIVNYKSI-KKEKIKFNPGKNVLVGKNNAGKSNIIKALELLLGE 49 >gi|257440920|ref|ZP_05616675.1| putative MukB domain/M protein repeat protein [Faecalibacterium prausnitzii A2-165] gi|257196636|gb|EEU94920.1| putative MukB domain/M protein repeat protein [Faecalibacterium prausnitzii A2-165] Length = 1127 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I + ++ F+ + IE D + + G+NG GKS++ +A++ + G T R + Sbjct: 3 KLKKILLINWLYFS-KELIEVGD-INFLTGKNGAGKSTVIDALQIVLLGETNSRNFNQAA 60 Query: 88 KKRSIKT 94 ++S +T Sbjct: 61 NEKSQRT 67 >gi|254441306|ref|ZP_05054799.1| hypothetical protein OA307_721 [Octadecabacter antarcticus 307] gi|198251384|gb|EDY75699.1| hypothetical protein OA307_721 [Octadecabacter antarcticus 307] Length = 1144 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + + F FT+ Q+ +F + I+ G N GK++ EA LFYG+ R Sbjct: 1 MRIQRLHLERFGHFTD-QEFDFGNGGDRPDFHIIYGPNEAGKTTTMEAALRLFYGFPLRE 59 Query: 82 KH 83 + Sbjct: 60 AY 61 >gi|1049325|gb|AAB51449.1| RecF [Caulobacter crescentus CB15] Length = 388 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + ++ FR + E ++E + G NG GK++L EAI L G + G S+ Sbjct: 6 LLSLTLADFRSY-ERARLETGGRSVYLFGANGAGKTNLLEAISLLSPG---KGLRGVSLA 61 Query: 89 KRSIKTPMP 97 + + P Sbjct: 62 EVGRRLPGE 70 >gi|83309737|ref|YP_420001.1| recombination protein F [Magnetospirillum magneticum AMB-1] gi|82944578|dbj|BAE49442.1| Recombinational DNA repair ATPase [Magnetospirillum magneticum AMB-1] Length = 394 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + ++E ++ G NG GK+++ EA+ +L G RR I Sbjct: 17 VRRLTLADFRCYR-TLRLETDSRPVVLTGANGAGKTNILEALSFLVPGRGLRRAGAADIT 75 Query: 89 KRSIKTPMPMCMA 101 + + P +A Sbjct: 76 RHGLAAGSPWAVA 88 >gi|16124414|ref|NP_418978.1| recombination protein F [Caulobacter crescentus CB15] gi|221233097|ref|YP_002515533.1| recombination protein F [Caulobacter crescentus NA1000] gi|239977550|sp|B8GXP9|RECF_CAUCN RecName: Full=DNA replication and repair protein recF gi|239977551|sp|P0CAW1|RECF_CAUCR RecName: Full=DNA replication and repair protein recF gi|13421272|gb|AAK22146.1| recF protein [Caulobacter crescentus CB15] gi|220962269|gb|ACL93625.1| DNA replication and repair protein recF [Caulobacter crescentus NA1000] Length = 387 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + ++ FR + E ++E + G NG GK++L EAI L G + G S+ Sbjct: 6 LLSLTLADFRSY-ERARLETGGRSVYLFGANGAGKTNLLEAISLLSPG---KGLRGVSLA 61 Query: 89 KRSIKTPMP 97 + + P Sbjct: 62 EVGRRLPGE 70 >gi|86131710|ref|ZP_01050307.1| DNA replication and repair protein RecF [Dokdonia donghaensis MED134] gi|85817532|gb|EAQ38706.1| DNA replication and repair protein RecF [Dokdonia donghaensis MED134] Length = 363 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E + F + G NG GK+++ +AI L +G + Sbjct: 3 LKSLSLINYKNF-ESKAFTFDAKINCFVGNNGVGKTNVLDAIYHLSFGKS 51 >gi|256838863|ref|ZP_05544373.1| ATP-binding protein [Parabacteroides sp. D13] gi|301308085|ref|ZP_07214039.1| probable ATP-binding protein [Bacteroides sp. 20_3] gi|256739782|gb|EEU53106.1| ATP-binding protein [Parabacteroides sp. D13] gi|300833555|gb|EFK64171.1| probable ATP-binding protein [Bacteroides sp. 20_3] Length = 345 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I +++F GF + +F + + ++ G+NG GK+ + + + Sbjct: 2 INSILLTNFTGFA-NNRFDFTEGVNVLIGKNGTGKTHVLKCL 42 >gi|251798284|ref|YP_003013015.1| hypothetical protein Pjdr2_4307 [Paenibacillus sp. JDR-2] gi|247545910|gb|ACT02929.1| conserved hypothetical protein [Paenibacillus sp. JDR-2] Length = 695 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++I +FR + + I + T++ G+N GK+S +E L T + K D Sbjct: 1 MRIEKVKIKNFRLLHDAE-ITLDEKTTVIVGRNNSGKTSFTEVFRRLLSDTTAKFKLED 58 >gi|297582342|ref|YP_003698122.1| DNA replication and repair protein RecF [Bacillus selenitireducens MLS10] gi|297140799|gb|ADH97556.1| DNA replication and repair protein RecF [Bacillus selenitireducens MLS10] Length = 373 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++++ +R +T + F + + + G+N GK+++ EAI L + R Sbjct: 1 MHINELKLTDYRNYT-KLHLTFENRVNVFLGENAQGKTNVMEAIYVLAMARSHRTAKDRE 59 Query: 87 IKK 89 + + Sbjct: 60 LIR 62 >gi|157375862|ref|YP_001474462.1| ATP-dependent OLD family endonuclease [Shewanella sediminis HAW-EB3] gi|157318236|gb|ABV37334.1| ATP-dependent endonuclease of the OLD family [Shewanella sediminis HAW-EB3] Length = 607 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Query: 27 FKLLDIEISHFRG--FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I++FRG F E I+ ++ T + G N GKS++ AI + + Sbjct: 1 MKLKKLIINNFRGIGFAE---IDL-ENFTTLVGPNNIGKSTILNAIHLVLDNKKPK 52 >gi|82779229|ref|YP_405578.1| recombination protein F [Shigella dysenteriae Sd197] gi|309784250|ref|ZP_07678889.1| DNA replication and repair protein recF [Shigella dysenteriae 1617] gi|97180962|sp|Q329B8|RECF_SHIDS RecName: Full=DNA replication and repair protein recF gi|81243377|gb|ABB64087.1| ssDNA and dsDNA binding, ATP binding [Shigella dysenteriae Sd197] gi|308927757|gb|EFP73225.1| DNA replication and repair protein recF [Shigella dysenteriae 1617] Length = 357 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSMLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|84684789|ref|ZP_01012689.1| hypothetical protein 1099457000245_RB2654_02734 [Maritimibacter alkaliphilus HTCC2654] gi|84667124|gb|EAQ13594.1| hypothetical protein RB2654_02734 [Rhodobacterales bacterium HTCC2654] Length = 415 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL--TIVNGQNGYGKSSLSEAIEWLFY 75 KL + +S FRG ++F + + G+N GKS++++A+EW Sbjct: 3 KLRKLSVSGFRGARFALPVDFTNKSRSLAIFGENAAGKSTITDALEWFLT 52 >gi|302653128|ref|XP_003018395.1| DNA repair protein Rad18, putative [Trichophyton verrucosum HKI 0517] gi|291182038|gb|EFE37750.1| DNA repair protein Rad18, putative [Trichophyton verrucosum HKI 0517] Length = 1088 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 100 IERVDCYNFMCH-EHFSVELGPLINFIVGKNGSGKSAILTALTLCLGGKASATNRGQSLK 158 >gi|260101427|ref|ZP_05751664.1| DNA repair protein RecN [Lactobacillus helveticus DSM 20075] gi|260084767|gb|EEW68887.1| DNA repair protein RecN [Lactobacillus helveticus DSM 20075] Length = 560 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L +Q+ Sbjct: 2 LVELDIKNF-AIIKNLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGSRSQKEM 54 >gi|224367229|ref|YP_002601392.1| ABC-type transporter, ATP-binding protein [Desulfobacterium autotrophicum HRM2] gi|223689945|gb|ACN13228.1| ABC-type transporter, ATP-binding protein [Desulfobacterium autotrophicum HRM2] Length = 261 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Query: 26 IFKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + ++ ++ +R + IEF L+I+ G NG GKS+L ++I L Sbjct: 1 MLRIQNLSF-GYRSAGKRHTVFQGLNIEFERGLSIILGPNGAGKSTLLKSIYGLLKYDGT 59 Query: 80 RRKHGDSIKKRSIKTPMPMCMAVPR 104 D++ + + +P+ Sbjct: 60 IYYGQDNLTRMKTDEKTKLMSYLPQ 84 >gi|121602459|ref|YP_989526.1| recombination protein F [Bartonella bacilliformis KC583] gi|120614636|gb|ABM45237.1| DNA replication and repair protein recF [Bartonella bacilliformis KC583] Length = 378 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++++H+R + + + F+ + G NG GK++L EA+ +L G RR Sbjct: 4 VAVTQLKLAHYRNYHFLN-VNFSSRHVVFTGHNGAGKTNLLEALSFLAPGRGLRR 57 >gi|120611305|ref|YP_970983.1| SMC domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589769|gb|ABM33209.1| SMC domain protein [Acidovorax citrulli AAC00-1] Length = 1164 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + +I+F L + G G GK++L +AI Y T R Sbjct: 1 MKILALRLKNLNSLKGEWRIDFTAPPFSEGGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 >gi|18310797|ref|NP_562731.1| DNA repair protein RecN [Clostridium perfringens str. 13] gi|18145478|dbj|BAB81521.1| DNA repair and genetic recombination protein [Clostridium perfringens str. 13] Length = 565 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I++F E ++F + TI++G+ G GKS L +AI ++ + + D I+ Sbjct: 2 LLQLTINNF-ALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGS----KFNKDLIR 56 Query: 89 KRSIKT 94 KT Sbjct: 57 TGEEKT 62 >gi|284929641|ref|YP_003422163.1| DNA replication and repair protein RecN [cyanobacterium UCYN-A] gi|284810085|gb|ADB95782.1| DNA replication and repair protein RecN [cyanobacterium UCYN-A] Length = 586 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++I +F + + F L ++ G+ G GKS + +AI+ + G +R + + Sbjct: 2 LSLLQIKNF-ALIDNLTVTFGSGLNVLTGETGAGKSIVLDAIDIVLGGRINQRLIRNKTQ 60 Query: 89 KRSIKTPMPMCMAV 102 IK + V Sbjct: 61 NVFIKATFQVNSEV 74 >gi|262274034|ref|ZP_06051846.1| hypothetical ATP-dependent endonuclease of the OLD family [Grimontia hollisae CIP 101886] gi|262221844|gb|EEY73157.1| hypothetical ATP-dependent endonuclease of the OLD family [Grimontia hollisae CIP 101886] Length = 543 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL IEIS FRG + D LT++ G+N +GKSSL +A+ Sbjct: 1 MKLDRIEISGFRGIRRLSLS--MDELTVLIGENAWGKSSLLDALSLCL 46 >gi|208609132|dbj|BAG72178.1| hypothetical protein [Vibrio cholerae] Length = 361 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ + + F E + EF +++ ++ G NG GKS+ I + G Sbjct: 10 LMRVNKLIYEGSKYFFESK--EFDENIILIEGDNGTGKSTFCNLIYFALGG 58 >gi|115360873|ref|YP_778010.1| ABC transporter related [Burkholderia ambifaria AMMD] gi|115286201|gb|ABI91676.1| ABC transporter related protein [Burkholderia ambifaria AMMD] Length = 337 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A L + LD+ FR + + +T + G NG GK++L EA+ G T R Sbjct: 37 AAALGARALDVTAGDFRFRAQHVRFRLG-AITAIIGPNGSGKTTLLEALLGFRRGATDVR 95 Query: 82 KHGDSIKKRSIKT 94 + + T Sbjct: 96 VLDEPAARFMRDT 108 >gi|299068540|emb|CBJ39767.1| conserved hypothethical protein, nucleoside triphosphate hydrolases domain [Ralstonia solanacearum CMR15] Length = 510 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 30 LDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWL 73 + I+ +G + + +I F + LT + G NG GKS++ A+ Sbjct: 9 HKLSINRLKGISSLDEIRFDEKPLTAILGPNGCGKSTILHALACC 53 >gi|227876700|ref|ZP_03994809.1| abortive infection protein [Mobiluncus mulieris ATCC 35243] gi|227842597|gb|EEJ52797.1| abortive infection protein [Mobiluncus mulieris ATCC 35243] Length = 458 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 18/65 (27%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------------------LTIVNGQNGYGKSSLSE 68 ++L + +FR E Q I+F +TI+ G N GKS++ + Sbjct: 1 MRILFFSVKNFRSVDETQTIDFVKGRVGGSPLVKGGWEPHVRPVTILMGPNAAGKSNVID 60 Query: 69 AIEWL 73 A+ ++ Sbjct: 61 AMGYV 65 >gi|268592090|ref|ZP_06126311.1| putative ATP-dependent dsDNA exonuclease [Providencia rettgeri DSM 1131] gi|291312485|gb|EFE52938.1| putative ATP-dependent dsDNA exonuclease [Providencia rettgeri DSM 1131] Length = 1227 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNINSLRGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHRTPR 60 >gi|224009966|ref|XP_002293941.1| smc-like protein [Thalassiosira pseudonana CCMP1335] gi|220970613|gb|EED88950.1| smc-like protein [Thalassiosira pseudonana CCMP1335] Length = 1127 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +F + ++ L +V G NG GKS++ AI G D + Sbjct: 27 IKRVKLKNFLTYDAVEFFP-GPRLNVVVGPNGTGKSTILCAICLGLGGQPPLLGRADDAR 85 >gi|71018685|ref|XP_759573.1| hypothetical protein UM03426.1 [Ustilago maydis 521] gi|46099331|gb|EAK84564.1| hypothetical protein UM03426.1 [Ustilago maydis 521] Length = 1276 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I +S+F + + + +L ++ G NG GKSS++ AI G+ ++ Sbjct: 221 IRRIALSNFLTY-DSVEFRVGPYLNLICGPNGTGKSSIACAIALGLGGHPSLLGRASNL 278 >gi|327438668|dbj|BAK15033.1| ATPase [Solibacillus silvestris StLB046] Length = 1017 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + ++ F + + + I+F + +V+G G GK+++ +AI + Y Sbjct: 1 MKPIKLSMTAFGPYHQKEVIDFTKLHEHGIFVVSGATGAGKTTIFDAITFALYDSGSGED 60 Query: 83 HGDSIKKRS------IKTPMPMCMAV 102 S+ RS + T + + V Sbjct: 61 REKSLFLRSDFADEAVDTEVELEFEV 86 >gi|300724348|ref|YP_003713666.1| hypothetical protein XNC1_3524 [Xenorhabdus nematophila ATCC 19061] gi|297630883|emb|CBJ91560.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 402 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS---EAIEWLFYGYTQRRKHGD 85 L + I F+ E+ + E +L ++ G NG GKS+L + + L G R + Sbjct: 39 LDKLTIKGFKSIHELNEFELK-NLNVIVGANGAGKSNLISFFKMLRALIDGTLNRYVRDN 97 >gi|255102984|ref|ZP_05331961.1| hypothetical protein CdifQCD-6_19398 [Clostridium difficile QCD-63q42] Length = 419 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ IEI G E+ + F L I+ G NG GK+++ E I LF + Sbjct: 27 MKIEKIEIKGIGGIKEL-SLRFNKGLNIICGANGIGKTTILEVISHLFSIQS 77 >gi|190571298|ref|YP_001975656.1| recF protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018695|ref|ZP_03334503.1| recF protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357570|emb|CAQ55009.1| recF protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995646|gb|EEB56286.1| recF protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 359 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +++ +FR + + ++ D +V G+NG GK+++ EAI L ++ + + Sbjct: 6 YIKKLKLYNFRSHSNFE-LDLDDRPVVVTGKNGIGKTNILEAISLLAKSNGMKKAKINEM 64 Query: 88 KKRSI 92 + R Sbjct: 65 QNRRS 69 >gi|125624483|ref|YP_001032966.1| DNA repair protein recN [Lactococcus lactis subsp. cremoris MG1363] gi|124493291|emb|CAL98259.1| DNA repair protein recN [Lactococcus lactis subsp. cremoris MG1363] gi|300071272|gb|ADJ60672.1| DNA repair protein recN [Lactococcus lactis subsp. cremoris NZ9000] Length = 555 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGASKAEIE 65 >gi|41207549|gb|AAR99643.1| RecN [Lactococcus lactis subsp. cremoris MG1363] Length = 135 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGASKAEIE 65 >gi|18071681|gb|AAL58284.1| acid-resistant locus arl23 [Lactococcus lactis subsp. cremoris MG1363] Length = 295 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGASKAEIE 65 >gi|50289173|ref|XP_447016.1| hypothetical protein [Candida glabrata CBS 138] gi|49526325|emb|CAG59949.1| unnamed protein product [Candida glabrata] Length = 1110 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F +E L + G+NG GKS++ AI G S+ Sbjct: 79 YIKKLTLHNFMCHR-NFDVELGPGLNFIVGKNGSGKSAILTAITIGLGAKASETNRGSSL 137 Query: 88 KKR 90 K Sbjct: 138 KDL 140 >gi|116511684|ref|YP_808900.1| ATPase for DNA repair [Lactococcus lactis subsp. cremoris SK11] gi|116107338|gb|ABJ72478.1| DNA replication and repair protein RecN [Lactococcus lactis subsp. cremoris SK11] Length = 555 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGASKAEIE 65 >gi|270264121|ref|ZP_06192388.1| DNA replication and repair protein RecF [Serratia odorifera 4Rx13] gi|270041770|gb|EFA14867.1| DNA replication and repair protein RecF [Serratia odorifera 4Rx13] Length = 361 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALAPGFNFLVGANGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|251795610|ref|YP_003010341.1| hypothetical protein Pjdr2_1585 [Paenibacillus sp. JDR-2] gi|247543236|gb|ACT00255.1| hypothetical protein Pjdr2_1585 [Paenibacillus sp. JDR-2] Length = 514 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 6/79 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +L+ ++ ++ G + I F ++T ++G+NG GKSS+ A W+ +G + +G+ Sbjct: 3 VIRLIQEQLINYAGIKDRT-ITFG-NVTNLSGKNGEGKSSIGGAPIWILFG---KDLYGN 57 Query: 86 SIKKRSIKTPMPMCMAVPR 104 K +P P R Sbjct: 58 DYTKDKY-SPRPSNYKYDR 75 >gi|157368283|ref|YP_001476272.1| recombination protein F [Serratia proteamaculans 568] gi|166918726|sp|A8G7Q4|RECF_SERP5 RecName: Full=DNA replication and repair protein recF gi|157320047|gb|ABV39144.1| DNA replication and repair protein RecF [Serratia proteamaculans 568] Length = 361 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALAPGFNFLVGANGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|330810113|ref|YP_004354575.1| nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378221|gb|AEA69571.1| Nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1213 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60 >gi|319411782|emb|CBQ73825.1| related to SMC5-Structural maintenance of chromosomes, required for cell viability [Sporisorium reilianum] Length = 1238 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I +S+F + + + +L ++ G NG GKSS++ AI G Sbjct: 160 IRRIALSNFLTY-DSVEFRVGPYLNLICGPNGTGKSSIACAIALGLGGQ 207 >gi|254481908|ref|ZP_05095151.1| hypothetical protein GPB2148_1599 [marine gamma proteobacterium HTCC2148] gi|214038037|gb|EEB78701.1| hypothetical protein GPB2148_1599 [marine gamma proteobacterium HTCC2148] Length = 662 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 28 KLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + +++F+ E+Q+I FA +T++ G N GKS++ +A+ + D+ Sbjct: 3 QIKSLRLANFKSIGAEVQEISFAP-ITLLFGPNSAGKSTVLQALVFAREAILHGNLDPDT 61 >gi|70730097|ref|YP_259836.1| nuclease SbcCD, C subunit [Pseudomonas fluorescens Pf-5] gi|68344396|gb|AAY92002.1| nuclease SbcCD, C subunit [Pseudomonas fluorescens Pf-5] Length = 1214 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60 >gi|57866847|ref|YP_188497.1| exonuclease SbcC [Staphylococcus epidermidis RP62A] gi|282876220|ref|ZP_06285087.1| exonuclease SbcCD, C subunit [Staphylococcus epidermidis SK135] gi|81819404|sp|Q5HPJ3|SBCC_STAEQ RecName: Full=Nuclease sbcCD subunit C gi|57637505|gb|AAW54293.1| exonuclease SbcC [Staphylococcus epidermidis RP62A] gi|281295245|gb|EFA87772.1| exonuclease SbcCD, C subunit [Staphylococcus epidermidis SK135] gi|329736545|gb|EGG72811.1| exonuclease SbcCD, C subunit [Staphylococcus epidermidis VCU045] Length = 1009 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L I + +F F + I+F D L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPLHIVMENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKT 59 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQLK 110 + ++ PM + YQ K Sbjct: 60 RKEGDLRSHFADGKSPMSVI-----YQFK 83 >gi|77459439|ref|YP_348946.1| exonuclease SbcC [Pseudomonas fluorescens Pf0-1] gi|77383442|gb|ABA74955.1| exonuclease [Pseudomonas fluorescens Pf0-1] Length = 1213 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60 >gi|328703668|ref|XP_001946623.2| PREDICTED: structural maintenance of chromosomes protein 5-like [Acyrthosiphon pisum] Length = 1044 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + + +F FTE+ L ++ G NG GKSS+ A+ F G + GD + Sbjct: 31 IVKVVLKNFMTFTEVTYTP-HSKLNLIIGPNGSGKSSIVTALILGFGGNPKDINRGDKV 88 >gi|328554164|gb|AEB24656.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus amyloliquefaciens TA208] Length = 576 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTISFERGLTVLTGETGAGKSIIIDAVSLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAELE 65 >gi|317179237|dbj|BAJ57025.1| hypothetical protein HPF30_0928 [Helicobacter pylori F30] Length = 394 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNVGKSNLLEAL-YCLVG 47 >gi|309795751|ref|ZP_07690166.1| recombination protein F [Escherichia coli MS 145-7] gi|308120630|gb|EFO57892.1| recombination protein F [Escherichia coli MS 145-7] Length = 357 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHDQE 66 >gi|308174219|ref|YP_003920924.1| DNA repair and recombination protein [Bacillus amyloliquefaciens DSM 7] gi|307607083|emb|CBI43454.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus amyloliquefaciens DSM 7] gi|328912556|gb|AEB64152.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus amyloliquefaciens LL3] Length = 576 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTISFERGLTVLTGETGAGKSIIIDAVSLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAELE 65 >gi|307073978|gb|ADN26583.1| DNA phosphorothioation protein DptD [Salmonella enterica subsp. enterica serovar Cerro] Length = 683 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 13/80 (16%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEW 72 RK+ + + + +FR F I+ A + + G NG GK+S+ AI Sbjct: 11 RKMNVLIKQLVLHNFRVFCGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRL 70 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 YG R G +++++ Sbjct: 71 ALYG---RLAFGPAMQQQEY 87 >gi|297620662|ref|YP_003708799.1| exonuclease SbcC [Waddlia chondrophila WSU 86-1044] gi|297375963|gb|ADI37793.1| exonuclease SbcC [Waddlia chondrophila WSU 86-1044] Length = 1081 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MRILQVRFKNLNSLVGEWQIDLTHPVFASDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|154686688|ref|YP_001421849.1| hypothetical protein RBAM_022570 [Bacillus amyloliquefaciens FZB42] gi|52673264|emb|CAH56505.1| DNA repair protein recN [Bacillus amyloliquefaciens FZB42] gi|154352539|gb|ABS74618.1| RecN [Bacillus amyloliquefaciens FZB42] Length = 576 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTISFERGLTVLTGETGAGKSIIIDAVSLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAELE 65 >gi|190341585|gb|ACE74869.1| RecN [Leclercia adecarboxylata ATCC 23216] gi|190341587|gb|ACE74870.1| RecN [Leclercia adecarboxylata] Length = 553 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNSGMTAITGETGAGKSIAIDALGLCLGG----RADGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|218709615|ref|YP_002417236.1| nuclease subunit C [Vibrio splendidus LGP32] gi|218322634|emb|CAV18804.1| Nuclease sbcCD subunit C [Vibrio splendidus LGP32] Length = 1240 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L +E + K++F + L + G G GK+++ +AI + T R Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 >gi|148980018|ref|ZP_01815839.1| exonuclease SbcC [Vibrionales bacterium SWAT-3] gi|145961461|gb|EDK26765.1| exonuclease SbcC [Vibrionales bacterium SWAT-3] Length = 1238 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L +E + K++F + L + G G GK+++ +AI + T R Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 >gi|71908175|ref|YP_285762.1| hypothetical protein Daro_2559 [Dechloromonas aromatica RCB] gi|71847796|gb|AAZ47292.1| conserved hypothetical protein [Dechloromonas aromatica RCB] Length = 645 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGD 85 KL + I++F+ F I ++ + G NG GK+++ +A+ LF RR Sbjct: 1 MKLTQLRINNFQSFGPTSTIIDLSAMSFLLGPNGTGKTAVLQALSRLFGFDPALRRVRRS 60 Query: 86 S 86 Sbjct: 61 D 61 >gi|86147742|ref|ZP_01066050.1| exonuclease SbcC [Vibrio sp. MED222] gi|85834523|gb|EAQ52673.1| exonuclease SbcC [Vibrio sp. MED222] Length = 1238 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L +E + K++F + L + G G GK+++ +AI + T R Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 >gi|84385652|ref|ZP_00988683.1| exonuclease SbcC [Vibrio splendidus 12B01] gi|84379632|gb|EAP96484.1| exonuclease SbcC [Vibrio splendidus 12B01] Length = 1238 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L +E + K++F + L + G G GK+++ +AI + T R Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 >gi|253578741|ref|ZP_04856012.1| SMC domain-containing protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849684|gb|EES77643.1| SMC domain-containing protein [Ruminococcus sp. 5_1_39BFAA] Length = 455 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 F + +IE+ ++R F + K + + G+NG GK+++ EA + Y Sbjct: 4 FNIQEIELFNYRQFEDK-KFVLNSRMNVFAGKNGSGKTTVLEAANVVLGAYLAA 56 >gi|145616092|ref|XP_001415168.1| hypothetical protein MGG_13522 [Magnaporthe oryzae 70-15] gi|145009858|gb|EDJ94514.1| hypothetical protein MGG_13522 [Magnaporthe oryzae 70-15] Length = 1119 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL +E +F E +E + + G+NG GKS++ AI G S+K Sbjct: 141 LLRVECVNFMCH-ERLNVELGPLMNFIVGENGSGKSAILTAITVCLGGKASSTNRAGSLK 199 >gi|221065088|ref|ZP_03541193.1| SMC domain protein [Comamonas testosteroni KF-1] gi|220710111|gb|EED65479.1| SMC domain protein [Comamonas testosteroni KF-1] Length = 1151 Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + +++F + L + G G GKS+L +AI Y T R Sbjct: 1 MKILKLRLKNLNSLKGEWQVDFTAEPFAGNSLFAITGPTGAGKSTLLDAICLALYHQTPR 60 >gi|251783552|ref|YP_002997857.1| recombination protein F [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392184|dbj|BAH82643.1| recombination protein F [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 368 Score = 42.7 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++E+ ++R + + F+ L + G N GK++ EAI +L + R + Sbjct: 1 MWIKELELKYYRNY-DHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKE 59 Query: 87 IKKRSIKT 94 + T Sbjct: 60 LIHFDHST 67 >gi|206602387|gb|EDZ38868.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way CG'] Length = 1175 Score = 42.7 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ +++ + F E +E L ++ G N GKS+ A+ L +GY RR Sbjct: 1 MRIERLDLLAYGPFREK-SLELGPGLHLLYGPNEAGKSTTLRALSSLLFGYPDRR 54 >gi|172035129|ref|YP_001801630.1| hypothetical protein cce_0213 [Cyanothece sp. ATCC 51142] gi|171696583|gb|ACB49564.1| unknown [Cyanothece sp. ATCC 51142] Length = 667 Score = 42.7 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 7/61 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ + +F + I + ++ G NG GK++L +AI YG Sbjct: 1 MLFTELVLQNFGPYAGKNIINLHTEKNKETRPIILIGGMNGGGKTTLMDAIRLALYGQRA 60 Query: 80 R 80 + Sbjct: 61 Q 61 >gi|148263102|ref|YP_001229808.1| hypothetical protein Gura_1029 [Geobacter uraniireducens Rf4] gi|146396602|gb|ABQ25235.1| conserved hypothetical protein [Geobacter uraniireducens Rf4] Length = 565 Score = 42.7 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + + +F+ F EIQ I +T++ G N GKSS+ ++ Sbjct: 2 LTALHLGNFKAFAEIQNIPI-RPITLIFGPNSAGKSSIIHSL 42 >gi|329936999|ref|ZP_08286628.1| hypothetical protein SGM_2120 [Streptomyces griseoaurantiacus M045] gi|329303606|gb|EGG47491.1| hypothetical protein SGM_2120 [Streptomyces griseoaurantiacus M045] Length = 413 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +LL++ + +FR E+ + LT++ G NG GKS++ + ++L Sbjct: 4 RLLELHVENFRSLREVT-VPLGP-LTVLVGPNGAGKSNVLKVFDFLAD 49 >gi|312961305|ref|ZP_07775810.1| hypothetical protein PFWH6_3221 [Pseudomonas fluorescens WH6] gi|311284963|gb|EFQ63539.1| hypothetical protein PFWH6_3221 [Pseudomonas fluorescens WH6] Length = 296 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60 Query: 81 RKHGDSIKKRSIKTPMPMCMAVPR 104 GD+ + + + + PR Sbjct: 61 --LGDTGQAKMPDADTDISIGDPR 82 >gi|306833434|ref|ZP_07466561.1| conserved hypothetical protein [Streptococcus bovis ATCC 700338] gi|304424204|gb|EFM27343.1| conserved hypothetical protein [Streptococcus bovis ATCC 700338] Length = 462 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 7/51 (13%) Query: 29 LLDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSEAIEW 72 L I+I RGF++ Q + F LT + G N GK+++ EAI++ Sbjct: 2 LNSIKIEGLRGFSKEQTLIFSKPNGKKGSGLTTLVGINNSGKTTIIEAIKY 52 >gi|295394844|ref|ZP_06805057.1| recombination protein F [Brevibacterium mcbrellneri ATCC 49030] gi|294972177|gb|EFG48039.1| recombination protein F [Brevibacterium mcbrellneri ATCC 49030] Length = 372 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR + E + ++ NG+GK++L EA+ ++ + + R Sbjct: 1 MWVSQLRLRNFRSY-ESFDVALEKGVSTFVAPNGWGKTNLVEALAYVSHLKSHRVSQDLP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVRSGCD 66 >gi|229491171|ref|ZP_04384999.1| DNA replication and repair protein RecF [Rhodococcus erythropolis SK121] gi|229321909|gb|EEN87702.1| DNA replication and repair protein RecF [Rhodococcus erythropolis SK121] Length = 409 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + FR + + ++ T+ G NG+GK+++ E++ +L + R Sbjct: 1 MFVRRFSLRDFRSW-DSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSADAP 59 Query: 87 IKKRSI 92 + + Sbjct: 60 MIRSGS 65 >gi|224367396|ref|YP_002601559.1| RecN [Desulfobacterium autotrophicum HRM2] gi|223690112|gb|ACN13395.1| RecN [Desulfobacterium autotrophicum HRM2] Length = 568 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++ I +F + +I F+ +++ G+ G GKS + EA+ L G Sbjct: 2 LSELAIKNF-AIIDDIRISFSRGFSVLTGETGAGKSIIIEAVNLLLGGRAASDL 54 >gi|254517092|ref|ZP_05129150.1| DNA repair protein RecN [gamma proteobacterium NOR5-3] gi|219674597|gb|EED30965.1| DNA repair protein RecN [gamma proteobacterium NOR5-3] Length = 551 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I IS F + +++F D LT+V G+ G GKS + +A+ Sbjct: 2 LTQITISQF-TVVDSLEVDFRDGLTVVTGETGAGKSIMLDALALCLG 47 >gi|209528038|ref|ZP_03276518.1| DNA repair protein RecN [Arthrospira maxima CS-328] gi|209491524|gb|EDZ91899.1| DNA repair protein RecN [Arthrospira maxima CS-328] Length = 587 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I +F + +EF L + G+ G GKS + +A++ + G RR Sbjct: 2 LISLRIENF-ALIDHLDLEFGPGLNVFTGETGAGKSIILDAVDAVLGGKVDRR 53 >gi|187251389|ref|YP_001875871.1| hypothetical protein Emin_0981 [Elusimicrobium minutum Pei191] gi|186971549|gb|ACC98534.1| hypothetical protein Emin_0981 [Elusimicrobium minutum Pei191] Length = 419 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ +++ + + I I + ++G+NG GKS++ +AI W+ G D+I+ Sbjct: 5 IISLQLENIKKIKAIT-IRPEGNFVEISGRNGQGKSTVLDAIWWVLKG-------KDNIQ 56 Query: 89 KRSIKTPMP 97 + ++ Sbjct: 57 QMPVRQGQE 65 >gi|149174335|ref|ZP_01852962.1| hypothetical protein PM8797T_03274 [Planctomyces maris DSM 8797] gi|148846880|gb|EDL61216.1| hypothetical protein PM8797T_03274 [Planctomyces maris DSM 8797] Length = 661 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L+ +I++FR T+ +T + G+N GK+++ +A+E Sbjct: 1 MQLISAQITNFRSITDSGIFSIDPKVTCLVGKNESGKTAILQALE 45 >gi|118578452|ref|YP_899702.1| recombination protein F [Pelobacter propionicus DSM 2379] gi|118501162|gb|ABK97644.1| DNA replication and repair protein RecF [Pelobacter propionicus DSM 2379] Length = 370 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I+ FR + +++G+NG GK++L EAI L + R Sbjct: 1 MRLTRLSIADFRNIGS-VRFTPGRCFNLIHGRNGQGKTNLLEAIYLLGSPRSFRNARLPD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 FIRHGEQ 66 >gi|313884676|ref|ZP_07818432.1| DNA repair protein RecN [Eremococcus coleocola ACS-139-V-Col8] gi|312620044|gb|EFR31477.1| DNA repair protein RecN [Eremococcus coleocola ACS-139-V-Col8] Length = 573 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + I +F + I+F+ +T+++G+ G GKS + +A+ + G R D I+ Sbjct: 2 LISLNIENF-AIIQATSIDFSRGMTVLSGETGAGKSIIIDALGLVCGG----RGSVDFIR 56 Query: 89 KRSIKTPMP 97 K + K + Sbjct: 57 KGADKLSLE 65 >gi|291541100|emb|CBL14211.1| Predicted ATP-dependent endonuclease of the OLD family [Roseburia intestinalis XB6B4] Length = 627 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHG 84 KL I I +F+ E+ KI+ ++ I+ GQN GK+++ EAI F Y + G Sbjct: 1 MKLTGIHIKNFKAIHEM-KIDSIENALILVGQNNTGKTTILEAIRASFGDYHISAEDFDG 59 Query: 85 D 85 D Sbjct: 60 D 60 >gi|254486983|ref|ZP_05100188.1| DNA replication and repair protein RecF [Roseobacter sp. GAI101] gi|214043852|gb|EEB84490.1| DNA replication and repair protein RecF [Roseobacter sp. GAI101] Length = 365 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +SHFR + ++ ++G NG GK+++ EA+ L G RR + Sbjct: 6 ISHLTLSHFRSH-KRAIVDSDTRPVAIHGPNGAGKTNILEAVSLLSPGRGLRRSSALDMT 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|78044702|ref|YP_359793.1| hypothetical protein CHY_0946 [Carboxydothermus hydrogenoformans Z-2901] gi|77996817|gb|ABB15716.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901] Length = 479 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + + +F+ + + FA L ++ G++ GK+++ A+ WLFY Sbjct: 1 MYLEKLILVNFQSH-KYSEFNFAPGLNVIVGESDRGKTAVIRALRWLFY 48 >gi|330794012|ref|XP_003285075.1| hypothetical protein DICPUDRAFT_148904 [Dictyostelium purpureum] gi|325084998|gb|EGC38414.1| hypothetical protein DICPUDRAFT_148904 [Dictyostelium purpureum] Length = 1122 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 ++ I++++F +++ + L +V G NG GKSS+ AI G G Sbjct: 70 IVRIKLNNFVTYSD-VEFRPGPRLNVVIGPNGSGKSSIVCAIALGLGGSPNLLGRQKQLG 128 Query: 85 DSIKK 89 D +K+ Sbjct: 129 DFVKR 133 >gi|302530078|ref|ZP_07282420.1| predicted protein [Streptomyces sp. AA4] gi|302438973|gb|EFL10789.1| predicted protein [Streptomyces sp. AA4] Length = 980 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + F + + ++F D L +++G G GK++L +AI + +G GD +K+ Sbjct: 1 MEAFGPYAGREVVDFDALGTDGLFLLHGDTGAGKTTLLDAIAFALFG-VVPGARGD-VKR 58 Query: 90 RSIKTPMP 97 P Sbjct: 59 LRCDLAEP 66 >gi|327197752|ref|YP_004301450.1| gp117 [Brochothrix phage A9] gi|299810352|gb|ADJ53151.1| gp117 [Brochothrix phage A9] Length = 651 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 9/83 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQN---------GYGKSSLSEAIEWLFYGY 77 KL I + +F E L +++G+N G KSS+ EA+ + YG Sbjct: 1 MKLQTITVKNFLSIGEATLKLADRGLILIDGKNTTNTEFQSNGSAKSSMLEAVTYALYGK 60 Query: 78 TQRRKHGDSIKKRSIKTPMPMCM 100 T D + R + + + Sbjct: 61 TTTGMTADDVINRKVGKKTEVVL 83 >gi|291166545|gb|EFE28591.1| DNA repair protein RecN [Filifactor alocis ATCC 35896] Length = 561 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F I+ T++ G+ G GKS + +AI RR + ++ Sbjct: 2 LKEIYIENF-ALISQLHIDINRGFTVITGETGSGKSIIIDAISLCLG----RRGSKEFVR 56 Query: 89 KRSIKTPMPMCM 100 K + + + Sbjct: 57 HGEDKAIIELRL 68 >gi|262381018|ref|ZP_06074156.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296195|gb|EEY84125.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 639 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + +FRG T I F+ + T++ G NG GK+ +++A WL +G + + IK Sbjct: 5 IKELSLVNFRGLT--INISFSAN-TLILGMNGIGKTRVNDAFLWLLFGKDTQGRQDYEIK 61 Query: 89 KRSIK 93 R Sbjct: 62 PRDQD 66 >gi|237722508|ref|ZP_04552989.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448318|gb|EEO54109.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 524 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 11/71 (15%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + IS FRGF + E D +T++ GQNG K++L + F + + Sbjct: 3 IKKVHISKFRGFA-NAEFEMGDQITVIAGQNGTQKTTLLGILSQTFSLRGHKTMN----- 56 Query: 89 KRSIKTPMPMC 99 T P+C Sbjct: 57 -----TAKPLC 62 >gi|332976664|gb|EGK13504.1| DNA repair protein RecN [Psychrobacter sp. 1501(2011)] Length = 587 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +F ++ F D ++ G+ G GKS L +A+ G Sbjct: 2 LTSLTLQNF-ALINHHELSFYDGFNVITGETGAGKSLLLDALSLCIGG 48 >gi|332019593|gb|EGI60072.1| Structural maintenance of chromosomes protein 5 [Acromyrmex echinatior] Length = 1046 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I + +F + ++ I +L ++ G NG GKS++ AI G Sbjct: 10 ITYIHLENFVTYDKVTVIP-GRYLNVIVGPNGSGKSTIVAAIVLGLGG 56 >gi|312218286|emb|CBX98232.1| similar to dna repair protein rad18 [Leptosphaeria maculans] Length = 1140 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F E + ++ + G NG GKS++ A+ G ++K Sbjct: 94 IEEIQCINFMCH-EHLTVPLGPNINFIIGHNGSGKSAVLTALTICLGGKATATNRAQNLK 152 >gi|300741773|ref|ZP_07071794.1| putative nuclease sbcCD subunit C [Rothia dentocariosa M567] gi|300380958|gb|EFJ77520.1| putative nuclease sbcCD subunit C [Rothia dentocariosa M567] Length = 1063 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 30 LDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +E F + + + I+F + ++NG G GK+++ +AI + YG Sbjct: 4 HRLEFEAFMAYPKREVIDFDALNEAGIFLLNGPTGSGKTTVLDAICYALYG 54 >gi|311113882|ref|YP_003985104.1| nuclease SbcCD subunit C [Rothia dentocariosa ATCC 17931] gi|310945376|gb|ADP41670.1| nuclease SbcCD subunit C [Rothia dentocariosa ATCC 17931] Length = 1063 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 30 LDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +E F + + + I+F + ++NG G GK+++ +AI + YG Sbjct: 4 HRLEFEAFMAYPKREVIDFDALNEAGIFLLNGPTGSGKTTVLDAICYALYG 54 >gi|194751397|ref|XP_001958013.1| GF23727 [Drosophila ananassae] gi|190625295|gb|EDV40819.1| GF23727 [Drosophila ananassae] Length = 1034 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +KL+ ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 10 KKLVGRIQSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|162456448|ref|YP_001618815.1| RecF protein [Sorangium cellulosum 'So ce 56'] gi|161167030|emb|CAN98335.1| RecF protein [Sorangium cellulosum 'So ce 56'] Length = 383 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I FR +E A + ++ G NG GK+SL EAI + + R Sbjct: 17 LERLHIREFRNLG-RVDVEPAPRINVIAGNNGQGKTSLLEAIYFAATSRSFRTHR 70 >gi|153940632|ref|YP_001390281.1| hypothetical protein CLI_1015 [Clostridium botulinum F str. Langeland] gi|152936528|gb|ABS42026.1| conserved hypothetical protein [Clostridium botulinum F str. Langeland] gi|295318374|gb|ADF98751.1| conserved hypothetical protein [Clostridium botulinum F str. 230613] Length = 246 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +LL ++ F + ++ +IEF +T + G+NG GKS++ EAI Sbjct: 10 VELLREKVESFSKYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|150005151|ref|YP_001299895.1| DNA replication and repair protein RecF [Bacteroides vulgatus ATCC 8482] gi|254883286|ref|ZP_05255996.1| DNA replication and repair protein recF [Bacteroides sp. 4_3_47FAA] gi|294778962|ref|ZP_06744378.1| DNA replication and repair protein RecF [Bacteroides vulgatus PC510] gi|319642660|ref|ZP_07997306.1| DNA replication and repair protein recF [Bacteroides sp. 3_1_40A] gi|166220701|sp|A6L3K9|RECF_BACV8 RecName: Full=DNA replication and repair protein recF gi|149933575|gb|ABR40273.1| DNA replication and repair protein RecF [Bacteroides vulgatus ATCC 8482] gi|254836079|gb|EET16388.1| DNA replication and repair protein recF [Bacteroides sp. 4_3_47FAA] gi|294447271|gb|EFG15855.1| DNA replication and repair protein RecF [Bacteroides vulgatus PC510] gi|317385748|gb|EFV66681.1| DNA replication and repair protein recF [Bacteroides sp. 3_1_40A] Length = 371 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++EF+ + GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQAELEFSPKMNCFIGQNGMGKTNLLDAVYYLSFCKSATN 54 >gi|23099329|ref|NP_692795.1| DNA repair and genetic recombination [Oceanobacillus iheyensis HTE831] gi|22777558|dbj|BAC13830.1| DNA repair and genetic recombination (recombination protein N) [Oceanobacillus iheyensis HTE831] Length = 564 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F + I F D LT++ G+ G GKS + +AI+ L G R D ++ Sbjct: 2 LTELSIQDF-AIIDDISITFNDGLTVLTGETGAGKSIIIDAIQLLAGG----RGSVDYVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGTKKATIE 65 >gi|46136645|ref|XP_390014.1| hypothetical protein FG09838.1 [Gibberella zeae PH-1] Length = 1164 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 121 IESITCFNFMCH-ERLHVDLGPLINFIVGENGSGKSAVLTALTLCLGGKASDTNRGGSLK 179 >gi|265750702|ref|ZP_06086765.1| DNA replication and repair protein recF [Bacteroides sp. 3_1_33FAA] gi|263237598|gb|EEZ23048.1| DNA replication and repair protein recF [Bacteroides sp. 3_1_33FAA] Length = 371 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++EF+ + GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQAELEFSPKMNCFIGQNGMGKTNLLDAVYYLSFCKSATN 54 >gi|237711116|ref|ZP_04541597.1| DNA replication and repair protein RecF [Bacteroides sp. 9_1_42FAA] gi|229454960|gb|EEO60681.1| DNA replication and repair protein RecF [Bacteroides sp. 9_1_42FAA] Length = 371 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++EF+ + GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQAELEFSPKMNCFIGQNGMGKTNLLDAVYYLSFCKSATN 54 >gi|212694619|ref|ZP_03302747.1| hypothetical protein BACDOR_04149 [Bacteroides dorei DSM 17855] gi|212663120|gb|EEB23694.1| hypothetical protein BACDOR_04149 [Bacteroides dorei DSM 17855] Length = 371 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I I +++ E ++EF+ + GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQAELEFSPKMNCFIGQNGMGKTNLLDAVYYLSFCKSATN 54 >gi|167756952|ref|ZP_02429079.1| hypothetical protein CLORAM_02501 [Clostridium ramosum DSM 1402] gi|167703127|gb|EDS17706.1| hypothetical protein CLORAM_02501 [Clostridium ramosum DSM 1402] Length = 551 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +F + +++F +H+T++ G+ G GKS + +AI L +Q Sbjct: 2 LESIYIENF-AIIDRLEVDFHNHMTVLTGETGAGKSIIIDAIGQLMGNRSQSSFIKADCD 60 Query: 89 KRSIK 93 + I+ Sbjct: 61 ECFIE 65 >gi|163840238|ref|YP_001624643.1| chromosome partition protein [Renibacterium salmoninarum ATCC 33209] gi|162953714|gb|ABY23229.1| chromosome partition protein [Renibacterium salmoninarum ATCC 33209] Length = 885 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 9/77 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + + +FRG + ++F + ++ G+N GK+S+ EA++ L D Sbjct: 1 MKLHRLSLENFRGISAR-SLDFPETGAIVIEGENEVGKTSMIEALDLLITE-------KD 52 Query: 86 SIKKRSIKTPMPMCMAV 102 S K +++ P+ V Sbjct: 53 SSNKAAVRAIKPVNADV 69 >gi|158339063|ref|YP_001520240.1| branched chain amino acid ABC transporter ATP-binding subunit [Acaryochloris marina MBIC11017] gi|158309304|gb|ABW30921.1| branched chain amino acid ABC transporter, ATP-binding subunit, putative [Acaryochloris marina MBIC11017] Length = 251 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L++ S F+ + + F + + G NG GKS+L +AI Sbjct: 10 LNVTFSGFKALSGVNLNVFDREIVTIIGPNGAGKSTLLDAI 50 >gi|126649545|ref|ZP_01721786.1| exonuclease [Bacillus sp. B14905] gi|126593870|gb|EAZ87793.1| exonuclease [Bacillus sp. B14905] Length = 1026 Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + I+ F + + I+F L ++G+ G GK+++ +AI + YG Sbjct: 1 MKPLKLTITAFGPYKNTEIIDFEQLGEHRLFAISGKTGAGKTTIFDAICYALYGSGSGED 60 Query: 83 HGDSIKKRS 91 D+ RS Sbjct: 61 RQDTALLRS 69 >gi|325288280|ref|YP_004264461.1| hypothetical protein Sgly_0086 [Syntrophobotulus glycolicus DSM 8271] gi|324963681|gb|ADY54460.1| hypothetical protein Sgly_0086 [Syntrophobotulus glycolicus DSM 8271] Length = 725 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQRRKH 83 L +++ +FR F E F + + G+N GKS+ + +L Y +R Sbjct: 1 MYLSGLQLINFRNF-ESACFIFNEGPNTIIGENDSGKSNAITGLRFLLDDSFLYNTKRLK 59 Query: 84 GDS 86 Sbjct: 60 ESD 62 >gi|293402160|ref|ZP_06646298.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304267|gb|EFE45518.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 434 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ E+ + + ++ LT++ G+N GK+S+ +++ W G R S Sbjct: 3 VKINRFELENVKRIKAVKVEPSPKGLTVIGGKNNQGKTSVIDSLAWALGG---ERYKPSS 59 Query: 87 IKKRSIKTPMPM 98 + TP M Sbjct: 60 AARDGSVTPPNM 71 >gi|260771049|ref|ZP_05879977.1| DNA recombination and repair protein RecF [Vibrio furnissii CIP 102972] gi|260613938|gb|EEX39129.1| DNA recombination and repair protein RecF [Vibrio furnissii CIP 102972] gi|315178624|gb|ADT85538.1| DNA replication and repair protein RecF [Vibrio furnissii NCTC 11218] Length = 359 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLTRLIVQQFRNIKACD-IPLSSGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|257065455|ref|YP_003145127.1| hypothetical protein Shel_27850 [Slackia heliotrinireducens DSM 20476] gi|256793108|gb|ACV23778.1| hypothetical protein Shel_27850 [Slackia heliotrinireducens DSM 20476] Length = 729 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L + I+ F F F++ L IV G N GKS++S ++ + +G+ R G Sbjct: 10 LEYLRINAFGRFYRTTLGPFSEGLNIVYGANEAGKSTVSAFVKGVLFGWEDARGRG 65 >gi|331092526|ref|ZP_08341348.1| hypothetical protein HMPREF9477_01991 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400747|gb|EGG80350.1| hypothetical protein HMPREF9477_01991 [Lachnospiraceae bacterium 2_1_46FAA] Length = 495 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KLL+ I +F F+ EF + + ++ G+N GK++L I+ + +G + R Sbjct: 1 MKLLETIIKNFGKFSGK-SWEFTEGINVIYGENESGKTTLYTFIKSMLFGLERGRGRASL 59 Query: 87 IKKRSIKTPMP 97 + S P Sbjct: 60 NDEFSQYEPWE 70 >gi|332162709|ref|YP_004299286.1| recombination and repair protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666939|gb|ADZ43583.1| recombination and repair protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859469|emb|CBX69813.1| DNA repair protein recN [Yersinia enterocolitica W22703] Length = 553 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|318606818|emb|CBY28316.1| DNA repair protein RecN [Yersinia enterocolitica subsp. palearctica Y11] Length = 553 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|190341591|gb|ACE74872.1| RecN [Yersinia enterocolitica] Length = 553 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|166031406|ref|ZP_02234235.1| hypothetical protein DORFOR_01095 [Dorea formicigenerans ATCC 27755] gi|166028811|gb|EDR47568.1| hypothetical protein DORFOR_01095 [Dorea formicigenerans ATCC 27755] Length = 897 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++S F + ++++ L ++ G G GK+++ + I + YG Sbjct: 1 MRPKKLKLSAFGPYAGCEELDMERLGTGGLYLITGDTGAGKTTIFDGIVYALYGAASGEN 60 Query: 83 HGDSIKKRSI 92 ++ + Sbjct: 61 REPAMLRSKY 70 >gi|123441344|ref|YP_001005331.1| recombination and repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088305|emb|CAL11096.1| DNA repair protein RecN [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 559 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 8 LTQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 56 >gi|329725096|gb|EGG61590.1| exonuclease SbcCD, C subunit [Staphylococcus epidermidis VCU144] Length = 1009 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L I + +F F + I+F D L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPLHIVMENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKT 59 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQLK 110 + ++ PM + YQ K Sbjct: 60 RKEGDLRSHFADGKSPMSVI-----YQFK 83 >gi|262040464|ref|ZP_06013707.1| DNA replication and repair protein RecF [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042217|gb|EEW43245.1| DNA replication and repair protein RecF [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 357 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-EHADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|238897210|ref|YP_002921958.1| recombination protein F [Klebsiella pneumoniae NTUH-K2044] gi|238549540|dbj|BAH65891.1| recombination protein F [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 357 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLSRLLIKDFRNI-EHADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHEQD 66 >gi|332306796|ref|YP_004434647.1| hypothetical protein Glaag_2437 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174125|gb|AEE23379.1| hypothetical protein Glaag_2437 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 422 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I + F+GF E E +LT++ G N GKS+L A+ Sbjct: 16 MMINSISLEGFKGFKEKTNFEIK-NLTLLFGYNNSGKSALIRAL 58 >gi|297570876|ref|YP_003696650.1| hypothetical protein Arch_0273 [Arcanobacterium haemolyticum DSM 20595] gi|296931223|gb|ADH92031.1| conserved hypothetical protein [Arcanobacterium haemolyticum DSM 20595] Length = 382 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ + + ++R F + IEF+ D + G N GKS+L + +L T + Sbjct: 1 MRISQVRVKNWRNFRD---IEFSLDRRLFIVGANATGKSNLLDVFRFLKDIATPGGGLTN 57 Query: 86 SIKKR-SIKTPMPMC 99 ++++R +KT + Sbjct: 58 AVERRGGLKTIRNLN 72 >gi|260598994|ref|YP_003211565.1| recombination and repair protein [Cronobacter turicensis z3032] gi|260218171|emb|CBA33014.1| DNA repair protein recN [Cronobacter turicensis z3032] Length = 573 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 12 CLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 C S++ Y RK L + IS+F E++ I+F +T + G+ G GKS +A+ Sbjct: 8 CNYSSVSLY--RKAAM-LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALG 63 Query: 72 WLFYGYTQRRKHGDSIKKRSIK 93 G R GD ++ + + Sbjct: 64 LCLGG----RAEGDMVRAGASR 81 >gi|238021871|ref|ZP_04602297.1| hypothetical protein GCWU000324_01775 [Kingella oralis ATCC 51147] gi|237866485|gb|EEP67527.1| hypothetical protein GCWU000324_01775 [Kingella oralis ATCC 51147] Length = 408 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ +EI ++ + +E L ++ G NG GKS+L EA+ + +G R + Sbjct: 1 MKIKRLEIKGYKSIGHLV-LEDVPSLMVLAGANGAGKSNLVEALAF--FGAVIRYGLDSA 57 Query: 87 IKKRS 91 IK Sbjct: 58 IKDFG 62 >gi|229085282|ref|ZP_04217524.1| Exonuclease [Bacillus cereus Rock3-44] gi|228698001|gb|EEL50744.1| Exonuclease [Bacillus cereus Rock3-44] Length = 1022 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I+F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQQEVIDFNDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDMSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKQYEIK 87 >gi|166033567|ref|ZP_02236396.1| hypothetical protein DORFOR_03293 [Dorea formicigenerans ATCC 27755] gi|166026752|gb|EDR45509.1| hypothetical protein DORFOR_03293 [Dorea formicigenerans ATCC 27755] Length = 375 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 16/69 (23%) Query: 29 LLDIEISHFRGFTEIQKIEFA--DHLTIV--------------NGQNGYGKSSLSEAIEW 72 L +E+ +F+ F KI+F ++ T++ G+N GKS++ +AI + Sbjct: 2 LKSVELRNFKSFHNKVKIDFEKTNYKTLLNTNVSGNLLKGALFVGKNASGKSNVLKAIRF 61 Query: 73 LFYGYTQRR 81 L + Sbjct: 62 LLECLLAKN 70 >gi|145299091|ref|YP_001141932.1| hypothetical protein ASA_2118 [Aeromonas salmonicida subsp. salmonicida A449] gi|142851863|gb|ABO90184.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 395 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + +F+ F + ++ ++ G NG GKS+L E+L Sbjct: 1 MHIESIHLKNFKSFRD-TRMNKIPKFCVLIGANGTGKSTLFAVFEFL 46 >gi|88601461|ref|YP_501639.1| putative RecF protein [Methanospirillum hungatei JF-1] gi|88186923|gb|ABD39920.1| putative RecF protein [Methanospirillum hungatei JF-1] Length = 132 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+ + + FR F +I + L IV G NG GKS+L Sbjct: 1 MKICSLSLKGFRSFKDISWS--PESLNIVIGPNGSGKSNLL 39 >gi|212639468|ref|YP_002315988.1| putative ATP-dependent endonuclease of the OLD family [Anoxybacillus flavithermus WK1] gi|212560948|gb|ACJ34003.1| Predicted ATP-dependent endonuclease of the OLD family [Anoxybacillus flavithermus WK1] Length = 569 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHG 84 +L+ +++++ F + IEF+ D + I+ G+N GKS++ EAI + + Sbjct: 1 MRLIKFSVTNYKVFEKTFTIEFSKDSIVILTGRNNTGKSTILEAINCFFQKESKAKTIPS 60 Query: 85 DSIKKRSIK 93 D KR + Sbjct: 61 DCFSKRDKE 69 >gi|187779045|ref|ZP_02995518.1| hypothetical protein CLOSPO_02640 [Clostridium sporogenes ATCC 15579] gi|187772670|gb|EDU36472.1| hypothetical protein CLOSPO_02640 [Clostridium sporogenes ATCC 15579] Length = 252 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +IEF +T + G+NG GKS++ EAI Sbjct: 40 DLSRIEFHPKVTYIVGENGTGKSTILEAI 68 >gi|170756917|ref|YP_001780563.1| hypothetical protein CLD_3629 [Clostridium botulinum B1 str. Okra] gi|169122129|gb|ACA45965.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra] Length = 244 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +IEF +T + G+NG GKS++ EAI Sbjct: 32 DLSRIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|168178328|ref|ZP_02612992.1| transporter [Clostridium botulinum NCTC 2916] gi|182671130|gb|EDT83104.1| transporter [Clostridium botulinum NCTC 2916] Length = 244 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +IEF +T + G+NG GKS++ EAI Sbjct: 32 DLSRIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|157371310|ref|YP_001479299.1| SMC domain-containing protein [Serratia proteamaculans 568] gi|157323074|gb|ABV42171.1| SMC domain protein [Serratia proteamaculans 568] Length = 365 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + ++++ FR +Q ++ L +++G NG GKS+L +A+ Sbjct: 1 MTIQQLQLTGFRSIRNLQ-LQLGR-LNVISGPNGCGKSNLYKAVR 43 >gi|148263901|ref|YP_001230607.1| ATP-dependent OLD family endonuclease [Geobacter uraniireducens Rf4] gi|146397401|gb|ABQ26034.1| ATP-dependent endonuclease of the OLD family-like protein [Geobacter uraniireducens Rf4] Length = 640 Score = 42.3 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ D+ I++FR + IE + D LT++ G N GK+S +AI + G ++ D Sbjct: 32 VKVTDVRIANFRSLMD---IEVSLDSLTVLIGANNAGKTSFLDAI-YAAIGAGRKLLGQD 87 Query: 86 SIK 88 I+ Sbjct: 88 DIR 90 >gi|317121345|ref|YP_004101348.1| SMC domain protein [Thermaerobacter marianensis DSM 12885] gi|315591325|gb|ADU50621.1| SMC domain protein [Thermaerobacter marianensis DSM 12885] Length = 409 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 32 IEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWL---FYGYTQRRKHG--- 84 +E R + I + E + LT++ G NG GKS+ +A+ ++ + Sbjct: 10 VEFIKIRNYKSIGRCEVRLNRLTVLVGPNGSGKSNFLDALRFVADALRTTLEHAIRDRGG 69 Query: 85 -DSIKKRSIKTPMPMCMAV 102 + +++RS P + + + Sbjct: 70 INEVRRRSYGHPHNLGITL 88 >gi|300723965|ref|YP_003713279.1| hypothetical protein XNC1_3107 [Xenorhabdus nematophila ATCC 19061] gi|297630496|emb|CBJ91161.1| hypothetical protein XNC1_3107 [Xenorhabdus nematophila ATCC 19061] Length = 539 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + I +FR E + E I GQN GK++ EAIEW F G Sbjct: 1 MMMINRVNIKNFRSI-ECETFECGK-FNIFVGQNNTGKTNFFEAIEWFFNG 49 >gi|289670697|ref|ZP_06491772.1| hypothetical protein XcampmN_19983 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 398 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ IEI +FR F K+ L ++ G NG GKS+L + +L + Sbjct: 1 MQIESIEIKNFRLFR-NAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALS 51 >gi|237803334|ref|ZP_04590919.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025315|gb|EGI05371.1| SMC domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 574 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + FR F + I + T++ G N GK++L A+ L Sbjct: 1 MLITKVVLKGFRNFADAT-INLERN-TLIIGANNVGKTNLVYALRLLLD 47 >gi|297204891|ref|ZP_06922288.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148792|gb|EDY55698.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 618 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L+++ +S+FR ++ I TI+ G N GK++ +AI L + Sbjct: 1 MRLVELSVSNFRSLGHVESIPIHKQ-TILTGHNDCGKTATLDAIAVLLGERSI 52 >gi|150021692|ref|YP_001307046.1| phosphate ABC transporter ATP-binding protein [Thermosipho melanesiensis BI429] gi|149794213|gb|ABR31661.1| phosphate ABC transporter, ATPase subunit [Thermosipho melanesiensis BI429] Length = 250 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Query: 29 LLDIEISHFRGFTEIQKIE-------FADHLTIVNGQNGYGKSSLSEAI 70 + IEI +F F +K+ F + +T + G +G GKS+L ++ Sbjct: 1 MKIIEIKNFSAFYGEKKVVKNVSFDIFKNKITAIIGPSGCGKSTLLRSV 49 >gi|58584222|ref|YP_203238.1| hypothetical protein XOO4599 [Xanthomonas oryzae pv. oryzae KACC10331] gi|188579216|ref|YP_001916145.1| hypothetical protein PXO_03536 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428816|gb|AAW77853.1| unknown protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188523668|gb|ACD61613.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 398 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ IEI +FR F K+ L ++ G NG GKS+L + +L + Sbjct: 1 MQIESIEIKNFRLFR-NAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALS 51 >gi|84625992|ref|YP_453364.1| hypothetical protein XOO_4335 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369932|dbj|BAE71090.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 398 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ IEI +FR F K+ L ++ G NG GKS+L + +L + Sbjct: 1 MQIESIEIKNFRLFR-NAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALS 51 >gi|311106639|ref|YP_003979492.1| RecF/RecN/SMC N terminal domain-containing protein [Achromobacter xylosoxidans A8] gi|310761328|gb|ADP16777.1| RecF/RecN/SMC N terminal domain protein [Achromobacter xylosoxidans A8] Length = 874 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + FR F + +E D L + G N GKS+++ AI F K D Sbjct: 1 MKLSRIALEEFRKFRQPMALEGLQDGLNLFVGPNEAGKSTVAAAIRSAFLERYSTSKVAD 60 >gi|254487740|ref|ZP_05100945.1| conserved hypothetical protein [Roseobacter sp. GAI101] gi|214044609|gb|EEB85247.1| conserved hypothetical protein [Roseobacter sp. GAI101] Length = 692 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L I + +FR + I+F + T+ G N GK+S + AI Sbjct: 1 MHLKKITVRNFRRLKD-VSIDFEESETVFVGPNNSGKTSATAAIR 44 >gi|166713775|ref|ZP_02244982.1| hypothetical protein Xoryp_20640 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 397 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I + +F+ F ++ + +V G NG GKS+L + +L Sbjct: 1 MKIESIRLRNFKAFRDVHLKD-MPSFLVVVGANGSGKSTLFDVFGFL 46 >gi|58580159|ref|YP_199175.1| hypothetical protein XOO0536 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622159|ref|YP_449531.1| hypothetical protein XOO_0502 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424753|gb|AAW73790.1| unknown protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366099|dbj|BAE67257.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 397 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I + +F+ F ++ + +V G NG GKS+L + +L Sbjct: 1 MKIESIRLRNFKAFRDVHLKD-MPSFLVVVGANGSGKSTLFDVFGFL 46 >gi|85711019|ref|ZP_01042080.1| Recombinational DNA repair ATPase [Idiomarina baltica OS145] gi|85695423|gb|EAQ33360.1| Recombinational DNA repair ATPase [Idiomarina baltica OS145] Length = 362 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L ++ +FR F ++ +F ++ G NG GK+SL EAI L +G + R Sbjct: 1 MRLNALKAINFRNF---KRFDFEPSPYANLIGGLNGSGKTSLIEAIYLLGFGRSFR 53 >gi|332881092|ref|ZP_08448760.1| DNA replication and repair protein RecF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681004|gb|EGJ53933.1| DNA replication and repair protein RecF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 359 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ + +EF+ + G NG GK++L +AI L G + Sbjct: 1 MFLKKVTVVNYKNISSKT-LEFSATINCFVGNNGAGKTNLLDAIYHLGMGKS 51 >gi|329767181|ref|ZP_08258708.1| hypothetical protein HMPREF0428_00405 [Gemella haemolysans M341] gi|328836848|gb|EGF86495.1| hypothetical protein HMPREF0428_00405 [Gemella haemolysans M341] Length = 378 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +++ +FR + + I+ L ++ G N GK+++ E+I L G + R K Sbjct: 1 MRIKSLKLLYFRNYLSMN-IDVHPSLNVLVGNNANGKTNIIESIFCLALGRSYRTKSDS 58 >gi|320537846|ref|ZP_08037762.1| hypothetical protein HMPREF9554_02516 [Treponema phagedenis F0421] gi|320145303|gb|EFW37003.1| hypothetical protein HMPREF9554_02516 [Treponema phagedenis F0421] Length = 536 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I+I +F+ F E +E ++ G N GKS++ EAI G Sbjct: 1 MTIKKIKIFNFKCFKEFT-LELNPEFNVLVGNNEAGKSTILEAINLALTG 49 >gi|319653288|ref|ZP_08007390.1| hypothetical protein HMPREF1013_04005 [Bacillus sp. 2_A_57_CT2] gi|317395209|gb|EFV75945.1| hypothetical protein HMPREF1013_04005 [Bacillus sp. 2_A_57_CT2] Length = 1044 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K L + + F + + + I+F + +++G+ G GK+++ + I + YG Sbjct: 1 MKPLKLTMQAFGPYADSESIDFTELGNRTMFVISGKTGSGKTTIFDGISYAIYG 54 >gi|300870126|ref|YP_003784997.1| putative ATPase [Brachyspira pilosicoli 95/1000] gi|300687825|gb|ADK30496.1| predicted ATPase [Brachyspira pilosicoli 95/1000] Length = 338 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + D+ I +FRGF + KI+ + + G+N GK+S+ E+I + + + Sbjct: 2 IRDLYIENFRGF-DKLKIDNIKKINFLVGKNNCGKTSVLESISLMISILNINTGYYINGI 60 Query: 89 KRSIKTPMPM 98 +R + P + Sbjct: 61 RRIKENPEEL 70 >gi|218508724|ref|ZP_03506602.1| ATP-dependent OLD family endonuclease [Rhizobium etli Brasil 5] Length = 325 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR---KHGDSIKKRSIKT 94 R F E I F HLT + G+N GKS++ +A+ LF RR I++++ Sbjct: 1 RSF-ENGLITFHPHLTAIVGENNGGKSNIVDALRLLFLPTNGRREIYCEESDIRRQAEDK 59 Query: 95 P 95 Sbjct: 60 E 60 >gi|197118821|ref|YP_002139248.1| DNA repair ATPase RecN [Geobacter bemidjiensis Bem] gi|197088181|gb|ACH39452.1| DNA repair ATPase RecN [Geobacter bemidjiensis Bem] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++I++ E +EFA L I+ G+ G GKS + +A+ + G + Sbjct: 2 LRELQITNL-AIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAR 60 Query: 89 KRSIK 93 + S++ Sbjct: 61 EASVE 65 >gi|320157814|ref|YP_004190193.1| DNA recombination and repair protein RecF [Vibrio vulnificus MO6-24/O] gi|319933126|gb|ADV87990.1| DNA recombination and repair protein RecF [Vibrio vulnificus MO6-24/O] Length = 359 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IALSPGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|160331189|ref|XP_001712302.1| smc2 [Hemiselmis andersenii] gi|159765749|gb|ABW97977.1| smc2 [Hemiselmis andersenii] Length = 1071 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 1/69 (1%) Query: 29 LLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +I I F+ + + G NG GKS+ ++I ++ + Sbjct: 4 IKEIIIDGFKSYGLKTVFTNLDPTFNSITGINGSGKSNFLDSICFVLGLSNLSVIRASKL 63 Query: 88 KKRSIKTPM 96 + + Sbjct: 64 QDLIFQNEK 72 >gi|113200655|ref|YP_717818.1| recombination endonuclease [Synechococcus phage syn9] gi|76574554|gb|ABA47119.1| recombination endonuclease [Synechococcus phage syn9] Length = 573 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + +I+FA+ T++ G NG GKS++ +A+ + + R+ + Sbjct: 1 MITFETIRWKNFLSTGDQWTEIDFAESPSTLIVGTNGAGKSTILDALCFALFNKPFRKIN 60 Query: 84 G 84 Sbjct: 61 K 61 >gi|45357895|ref|NP_987452.1| hypothetical protein MMP0332 [Methanococcus maripaludis S2] gi|45047455|emb|CAF29888.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 626 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I ++R E+ + F ++ G+N GKS++ +AI+ + Sbjct: 1 MYLSKVHIENYRSIKELD-LTFDQGKNVIVGKNNAGKSNIIKAIDIVLGE 49 >gi|37678197|ref|NP_932806.1| recombination protein F [Vibrio vulnificus YJ016] gi|51316312|sp|Q7MQJ5|RECF_VIBVY RecName: Full=DNA replication and repair protein recF gi|37196936|dbj|BAC92777.1| Recombinational DNA repair ATPase [Vibrio vulnificus YJ016] Length = 359 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IALSPGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|27364431|ref|NP_759959.1| recombination protein F [Vibrio vulnificus CMCP6] gi|32129961|sp|Q8DDJ1|RECF_VIBVU RecName: Full=DNA replication and repair protein recF gi|27360550|gb|AAO09486.1| DNA recombination and repair protein RecF [Vibrio vulnificus CMCP6] Length = 359 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IALSPGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|189485480|ref|YP_001956421.1| hypothetical protein TGRD_477 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287439|dbj|BAG13960.1| conserved hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 807 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ ++ IS RG ++ ++ G+NG GKSS+++AIEWL Sbjct: 3 IKINNLTISGIRGIQNTINLQLNGKSILLYGENGSGKSSITDAIEWL 49 >gi|110807610|ref|YP_691130.1| recombination protein F [Shigella flexneri 5 str. 8401] gi|123342286|sp|Q0SYP0|RECF_SHIF8 RecName: Full=DNA replication and repair protein recF gi|110617158|gb|ABF05825.1| ssDNA and dsDNA binding, ATP binding [Shigella flexneri 5 str. 8401] Length = 357 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + + G NG GK+S+ EAI L +G R Sbjct: 1 MSLTRLLIRDFRNI-ETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGC 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQE 66 >gi|73662265|ref|YP_301046.1| hypothetical protein SSP0956 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494780|dbj|BAE18101.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 977 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +EI + F E KIEF + T + G+N GKS++ I + +G+ ++++ Sbjct: 1 MKIKSLEIYGYGRFIER-KIEFDESFTQIYGENETGKSTIQAFIHSILFGFPTKKEN 56 >gi|298372052|ref|ZP_06982042.1| RecF protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274956|gb|EFI16507.1| RecF protein [Bacteroidetes oral taxon 274 str. F0058] Length = 364 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I I ++R E + + F+ + + G NG GK++L +A+ +L + + + Sbjct: 1 MYLKKINILNYRNIEESELV-FSPKINLFWGNNGMGKTNLLDAVYYLSFCKSHLNAIDNQ 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRHDTD 66 >gi|282881520|ref|ZP_06290190.1| DNA replication and repair protein RecF [Prevotella timonensis CRIS 5C-B1] gi|281304631|gb|EFA96721.1| DNA replication and repair protein RecF [Prevotella timonensis CRIS 5C-B1] Length = 370 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E+ +EF+ L + G NG GK++L +AI +L + + Sbjct: 1 MLLKKISILNYKNI-EVADLEFSSKLNCLIGHNGEGKTNLLDAIYYLSFCRSA 52 >gi|326202804|ref|ZP_08192671.1| hypothetical protein Cpap_2113 [Clostridium papyrosolvens DSM 2782] gi|325986881|gb|EGD47710.1| hypothetical protein Cpap_2113 [Clostridium papyrosolvens DSM 2782] Length = 664 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ + + F G E +F+D L ++ G N GKS+L I+ + YG Sbjct: 1 MKIDRLHVRGF-GKLEDFTCDFSDGLNVIYGHNESGKSTLMAFIKAMLYG 49 >gi|254773056|ref|ZP_05214572.1| recombination protein F [Mycobacterium avium subsp. avium ATCC 25291] Length = 385 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|190341703|gb|ACE74928.1| RecN [Cronobacter turicensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341701|gb|ACE74927.1| RecN [Cronobacter turicensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341695|gb|ACE74924.1| RecN [Cronobacter turicensis] gi|190341697|gb|ACE74925.1| RecN [Cronobacter turicensis] gi|190341699|gb|ACE74926.1| RecN [Cronobacter turicensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341693|gb|ACE74923.1| RecN [Cronobacter turicensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341691|gb|ACE74922.1| RecN [Cronobacter turicensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341665|gb|ACE74909.1| RecN [Cronobacter sakazakii] gi|190341669|gb|ACE74911.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341657|gb|ACE74905.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341655|gb|ACE74904.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341651|gb|ACE74902.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341649|gb|ACE74901.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341641|gb|ACE74897.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341629|gb|ACE74891.1| RecN [Cronobacter muytjensii] gi|190341631|gb|ACE74892.1| RecN [Cronobacter muytjensii] gi|190341633|gb|ACE74893.1| RecN [Cronobacter muytjensii] gi|190341635|gb|ACE74894.1| RecN [Cronobacter muytjensii] gi|190341637|gb|ACE74895.1| RecN [Cronobacter muytjensii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341627|gb|ACE74890.1| RecN [Cronobacter malonaticus] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341611|gb|ACE74882.1| RecN [Cronobacter malonaticus] gi|190341621|gb|ACE74887.1| RecN [Cronobacter malonaticus] gi|190341625|gb|ACE74889.1| RecN [Cronobacter malonaticus] gi|190341639|gb|ACE74896.1| RecN [Cronobacter sakazakii] gi|190341643|gb|ACE74898.1| RecN [Cronobacter sakazakii] gi|190341645|gb|ACE74899.1| RecN [Cronobacter sakazakii] gi|190341647|gb|ACE74900.1| RecN [Cronobacter sakazakii] gi|190341653|gb|ACE74903.1| RecN [Cronobacter sakazakii] gi|190341659|gb|ACE74906.1| RecN [Cronobacter sakazakii] gi|190341661|gb|ACE74907.1| RecN [Cronobacter sakazakii] gi|190341663|gb|ACE74908.1| RecN [Cronobacter sakazakii] gi|190341667|gb|ACE74910.1| RecN [Cronobacter sakazakii] gi|190341671|gb|ACE74912.1| RecN [Cronobacter sakazakii] gi|190341673|gb|ACE74913.1| RecN [Cronobacter sakazakii] gi|190341675|gb|ACE74914.1| RecN [Cronobacter sakazakii] gi|190341677|gb|ACE74915.1| RecN [Cronobacter sakazakii] gi|190341679|gb|ACE74916.1| RecN [Cronobacter sakazakii] gi|190341681|gb|ACE74917.1| RecN [Cronobacter sakazakii] gi|190341683|gb|ACE74918.1| RecN [Cronobacter sakazakii] gi|190341685|gb|ACE74919.1| RecN [Cronobacter sakazakii] gi|190341687|gb|ACE74920.1| RecN [Cronobacter sakazakii] gi|190341689|gb|ACE74921.1| RecN [Cronobacter sakazakii] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341607|gb|ACE74880.1| RecN [Cronobacter malonaticus] gi|190341609|gb|ACE74881.1| RecN [Cronobacter malonaticus] gi|190341613|gb|ACE74883.1| RecN [Cronobacter malonaticus] gi|190341615|gb|ACE74884.1| RecN [Cronobacter malonaticus] gi|190341617|gb|ACE74885.1| RecN [Cronobacter malonaticus] gi|190341619|gb|ACE74886.1| RecN [Cronobacter malonaticus] gi|190341623|gb|ACE74888.1| RecN [Cronobacter malonaticus] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341605|gb|ACE74879.1| RecN [Cronobacter genomosp. 1] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341603|gb|ACE74878.1| RecN [Cronobacter genomosp. 1] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341601|gb|ACE74877.1| RecN [Cronobacter dublinensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341597|gb|ACE74875.1| RecN [Cronobacter dublinensis] gi|190341599|gb|ACE74876.1| RecN [Cronobacter dublinensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341595|gb|ACE74874.1| RecN [Cronobacter dublinensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|190341593|gb|ACE74873.1| RecN [Cronobacter dublinensis] Length = 553 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|194016711|ref|ZP_03055324.1| DNA repair protein RecN [Bacillus pumilus ATCC 7061] gi|194011317|gb|EDW20886.1| DNA repair protein RecN [Bacillus pumilus ATCC 7061] Length = 578 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELTIKNF-AIIEELTVSFEKGLTVLTGETGAGKSIMIDAVSLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMPMCMAVP 103 K + VP Sbjct: 57 YGEKKAELEGLFLVP 71 >gi|157692923|ref|YP_001487385.1| DNA repair protein RecN [Bacillus pumilus SAFR-032] gi|157681681|gb|ABV62825.1| DNA repair protein RecN [Bacillus pumilus SAFR-032] Length = 578 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELTIKNF-AIIEELTVSFEKGLTVLTGETGAGKSIMIDAVSLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMPMCMAVP 103 K + VP Sbjct: 57 YGEKKAELEGLFLVP 71 >gi|157148135|ref|YP_001455454.1| hypothetical protein CKO_03946 [Citrobacter koseri ATCC BAA-895] gi|157085340|gb|ABV15018.1| hypothetical protein CKO_03946 [Citrobacter koseri ATCC BAA-895] Length = 711 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 23/56 (41%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 A+ + + + I +++ F + + G+N GK++L A+ + Sbjct: 4 AQSITMYINKLAIRNYKNFRSSNFYFVKGSVNTIIGENASGKTNLFNAMRLILDDS 59 >gi|148243631|ref|YP_001228788.1| ATPase involved in DNA repair RecN [Synechococcus sp. RCC307] gi|147851941|emb|CAK29435.1| ATPase involved in DNA repair RecN [Synechococcus sp. RCC307] Length = 560 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+ + Q++ F T++ G+ G GKS L +A++ + G +R D Sbjct: 2 LTGLHISNI-ALIDSQELVFGPGFTVLTGETGAGKSILLDALDAVTGGGQPQRLLRDGCV 60 Query: 89 KRSIK 93 + SI+ Sbjct: 61 RGSIE 65 >gi|118465169|ref|YP_879306.1| recombination protein F [Mycobacterium avium 104] gi|166220715|sp|A0Q8R8|RECF_MYCA1 RecName: Full=DNA replication and repair protein recF gi|118166456|gb|ABK67353.1| DNA replication and repair protein RecF [Mycobacterium avium 104] Length = 385 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|116618693|ref|YP_819064.1| DNA repair ATPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097540|gb|ABJ62691.1| DNA replication and repair protein RecN [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 555 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E ++F + ++++ G+ G GKS + +A+ L G R + + ++ Sbjct: 2 LENLIIENF-AIIEKVDLQFEEGMSVLTGETGAGKSIIIDALFMLTGG----RANSEMVR 56 Query: 89 KRSIKTPMPMCMAVP 103 S K + +VP Sbjct: 57 HGSKKAVLQAVFSVP 71 >gi|6969272|gb|AAF33693.1| putative recF [Mycobacterium avium subsp. paratuberculosis] Length = 385 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|27467947|ref|NP_764584.1| exonuclease SbcC [Staphylococcus epidermidis ATCC 12228] gi|81842871|sp|Q8CPC5|SBCC_STAES RecName: Full=Nuclease sbcCD subunit C gi|27315492|gb|AAO04626.1|AE016747_123 exonuclease SbcC [Staphylococcus epidermidis ATCC 12228] Length = 1009 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L I + +F F + I+F D L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPLHIVMENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKT 59 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQLK 110 + ++ PM + YQ K Sbjct: 60 RKEGDLRSHFADGKSPMSVI-----YQFK 83 >gi|41406101|ref|NP_958937.1| recombination protein F [Mycobacterium avium subsp. paratuberculosis K-10] gi|45645207|sp|Q9L7L5|RECF_MYCPA RecName: Full=DNA replication and repair protein recF gi|41394449|gb|AAS02320.1| RecF [Mycobacterium avium subsp. paratuberculosis K-10] Length = 385 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LIRAGAD 66 >gi|328471240|gb|EGF42142.1| recombination protein F [Vibrio parahaemolyticus 10329] Length = 359 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I+ + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IQLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|28896787|ref|NP_796392.1| recombination protein F [Vibrio parahaemolyticus RIMD 2210633] gi|153839066|ref|ZP_01991733.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AQ3810] gi|260363486|ref|ZP_05776319.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus K5030] gi|260876545|ref|ZP_05888900.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AN-5034] gi|260897306|ref|ZP_05905802.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus Peru-466] gi|260901414|ref|ZP_05909809.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AQ4037] gi|32129958|sp|Q87TQ5|RECF_VIBPA RecName: Full=DNA replication and repair protein recF gi|28804995|dbj|BAC58276.1| RecF protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747449|gb|EDM58403.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AQ3810] gi|308087832|gb|EFO37527.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus Peru-466] gi|308090410|gb|EFO40105.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AN-5034] gi|308107203|gb|EFO44743.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus AQ4037] gi|308113567|gb|EFO51107.1| DNA replication and repair protein RecF [Vibrio parahaemolyticus K5030] Length = 359 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I+ + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IQLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|332294949|ref|YP_004436872.1| SMC domain protein [Thermodesulfobium narugense DSM 14796] gi|332178052|gb|AEE13741.1| SMC domain protein [Thermodesulfobium narugense DSM 14796] Length = 1216 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F ++ + ++ GQ G GKS++ +AI YG T R Sbjct: 1 MKILKIRLKNINSLYNEWTIDFTHPEFISNSIFLITGQTGAGKSTILDAISLALYGKTPR 60 >gi|322805247|emb|CBZ02811.1| putative ATP-binding protein [Clostridium botulinum H04402 065] Length = 244 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +IEF +T + G+NG GKS++ EAI Sbjct: 32 DLSRIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|295134718|ref|YP_003585394.1| ATP/GTP-binding site motif A (P-loop):ABC transporter [Zunongwangia profunda SM-A87] gi|294982733|gb|ADF53198.1| ATP/GTP-binding site motif A (P-loop):ABC transporter [Zunongwangia profunda SM-A87] Length = 1006 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 8/92 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L IE + Q+I+F D L + G G GKS++ + I + + R Sbjct: 1 MKILKIEFENINSLRGPQQIDFTDKPFSASSLFAITGPTGSGKSTILDVICLALFNHVPR 60 Query: 81 --RKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 + + I + A R Y K Sbjct: 61 LGKITKNEIIAKGAILTRNQKEAFARVTYDCK 92 >gi|226948203|ref|YP_002803294.1| transporter [Clostridium botulinum A2 str. Kyoto] gi|226841334|gb|ACO84000.1| transporter [Clostridium botulinum A2 str. Kyoto] Length = 244 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +IEF +T + G+NG GKS++ EAI Sbjct: 32 DLSRIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|190341515|gb|ACE74834.1| RecN [Enterobacter helveticus] gi|190341517|gb|ACE74835.1| RecN [Enterobacter helveticus] gi|190341519|gb|ACE74836.1| RecN [Enterobacter helveticus] gi|190341521|gb|ACE74837.1| RecN [Enterobacter helveticus] gi|190341523|gb|ACE74838.1| RecN [Enterobacter helveticus] gi|190341525|gb|ACE74839.1| RecN [Enterobacter helveticus] gi|190341527|gb|ACE74840.1| RecN [Enterobacter helveticus] gi|190341529|gb|ACE74841.1| RecN [Enterobacter helveticus] gi|190341531|gb|ACE74842.1| RecN [Enterobacter helveticus] gi|190341533|gb|ACE74843.1| RecN [Enterobacter helveticus] gi|190341535|gb|ACE74844.1| RecN [Enterobacter helveticus] gi|190341537|gb|ACE74845.1| RecN [Enterobacter helveticus] gi|190341539|gb|ACE74846.1| RecN [Enterobacter helveticus] Length = 553 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFHAGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|268593268|ref|ZP_06127489.1| DNA repair protein RecN [Providencia rettgeri DSM 1131] gi|291311164|gb|EFE51617.1| DNA repair protein RecN [Providencia rettgeri DSM 1131] Length = 553 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F E++ I+F + +T + G+ G GKS +A+ + Sbjct: 2 LTQLTINNFAIVRELE-IDFRNGMTAITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|224023957|ref|ZP_03642323.1| hypothetical protein BACCOPRO_00674 [Bacteroides coprophilus DSM 18228] gi|224017179|gb|EEF75191.1| hypothetical protein BACCOPRO_00674 [Bacteroides coprophilus DSM 18228] Length = 444 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + DI I +FR + E + +EF + ++ G N GK+SL A + Sbjct: 1 MHDITIKNFRCY-EEKSMEFRRGVNLLIGDNSVGKTSLLHACNLVM 45 >gi|167725796|ref|ZP_02409032.1| hypothetical protein BpseD_42663 [Burkholderia pseudomallei DM98] Length = 588 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ DI +++ G + A +++ G NG GKSSL EA+ G T R Sbjct: 1 MKITDIYVANVLGIR-TADLRLAKPVSLFTGPNGAGKSSLQEAVRMALTGDTVR 53 >gi|33602023|ref|NP_889583.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|33576461|emb|CAE33539.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] Length = 881 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL I + FR F + +E D L I+ G N GKS+ A+ F K Sbjct: 1 MKLRRIALEAFRKFRQPVALEDLDGGLNIIVGPNEAGKSTFVAALRAAFLERYATNK 57 >gi|33597620|ref|NP_885263.1| putative GTP-binding protein [Bordetella parapertussis 12822] gi|33574048|emb|CAE38371.1| putative GTP-binding protein [Bordetella parapertussis] Length = 878 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL I + FR F + +E D L I+ G N GKS+ A+ F K Sbjct: 1 MKLRRIALEAFRKFRQPVALEDLDGGLNIIVGPNEAGKSTFVAALRAAFLERYATNK 57 >gi|33593606|ref|NP_881250.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33563679|emb|CAE42907.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|332383011|gb|AEE67858.1| putative GTP-binding protein [Bordetella pertussis CS] Length = 878 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL I + FR F + +E D L I+ G N GKS+ A+ F K Sbjct: 1 MKLRRIALEAFRKFRQPVALEDLDGGLNIIVGPNEAGKSTFVAALRAAFLERYATNK 57 >gi|302331138|gb|ADL21332.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 1002] Length = 584 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I +R F + E I+ G N GKS+L EAI G Sbjct: 5 ITRVQIRGYRRFQDFT-FEPEAGTNIIVGGNEAGKSTLLEAITLALAG 51 >gi|300858883|ref|YP_003783866.1| hypothetical protein cpfrc_01466 [Corynebacterium pseudotuberculosis FRC41] gi|300686337|gb|ADK29259.1| hypothetical protein cpfrc_01466 [Corynebacterium pseudotuberculosis FRC41] gi|302206583|gb|ADL10925.1| Putative SMC domain-containing protein [Corynebacterium pseudotuberculosis C231] gi|308276826|gb|ADO26725.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis I19] Length = 543 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I +R F + E I+ G N GKS+L EAI G Sbjct: 5 ITRVQIRGYRRFQDFT-FEPEAGTNIIVGGNEAGKSTLLEAITLALAG 51 >gi|226953377|ref|ZP_03823841.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] gi|226835873|gb|EEH68256.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] Length = 413 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +L I I F+ E E + + G NG GKS+ +A+ + Sbjct: 1 MELQRICIRGFKSI-EDVIFEPKTGFSCLVGSNGAGKSNFCDALIF 45 >gi|163737044|ref|ZP_02144462.1| hypothetical protein RGBS107_02838 [Phaeobacter gallaeciensis BS107] gi|161389648|gb|EDQ13999.1| hypothetical protein RGBS107_02838 [Phaeobacter gallaeciensis BS107] Length = 511 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I +++ R F + +I L +++ N GKS++ +A+ LF+ Sbjct: 1 MKLTSIRLTNVRRFVDPVEITGIGPGLNLLSAPNEQGKSTIFDALHALFF 50 >gi|118578554|ref|YP_899804.1| hypothetical protein Ppro_0107 [Pelobacter propionicus DSM 2379] gi|118501264|gb|ABK97746.1| hypothetical protein Ppro_0107 [Pelobacter propionicus DSM 2379] Length = 869 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 5 RKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKS 64 RK C S S + Y+ L+ L +E E Q IEF+ LTI+ G NG GKS Sbjct: 64 RKSINITCDSISNSDYHKNLLLSSLYGVE--GVNALVEKQTIEFSPKLTIIYGVNGSGKS 121 >gi|330006875|ref|ZP_08305749.1| nuclease sbcCD, subunit C [Klebsiella sp. MS 92-3] gi|328535681|gb|EGF62128.1| nuclease sbcCD, subunit C [Klebsiella sp. MS 92-3] Length = 1045 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|327183845|gb|AEA32292.1| DNA repair protein recn [Lactobacillus amylovorus GRL 1118] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|325663352|ref|ZP_08151802.1| hypothetical protein HMPREF0490_02543 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470806|gb|EGC74036.1| hypothetical protein HMPREF0490_02543 [Lachnospiraceae bacterium 4_1_37FAA] Length = 522 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L + + +F + + EF + + ++ G NG GK++ EA+ YG Sbjct: 3 LKKLIMHNFGVYASTNQFEFNGTNPVVLIGGMNGRGKTTFLEAVLLGLYGS 53 >gi|325957121|ref|YP_004292533.1| DNA repair protein recn [Lactobacillus acidophilus 30SC] gi|325333686|gb|ADZ07594.1| DNA repair protein recn [Lactobacillus acidophilus 30SC] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|326784541|ref|YP_004324968.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM7] gi|310004574|gb|ADO98966.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM7] Length = 573 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + +I+F T++ G NG GKS++ +A+ + + R+ + Sbjct: 1 MITFETIRWKNFLSTGDQWTEIDFCESPSTLIVGSNGAGKSTMLDALCFALFNKPFRKIN 60 Query: 84 GDSIKKRSIKT--PMPMCMAVPRCKYQL 109 + + + +C ++ + +Y++ Sbjct: 61 RGQLVNSINEKGLKVEVCFSIGKDEYRV 88 >gi|300856184|ref|YP_003781168.1| hypothetical protein CLJU_c30180 [Clostridium ljungdahlii DSM 13528] gi|300436299|gb|ADK16066.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528] Length = 688 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHG 84 L + + FR F + ++ + ++LT + G N GK+++ +A+ LF + R Sbjct: 1 MNLKKLRLCRFRCFGDDEQEIYFNNLTTLIGNNSCGKTTVLQALLKLFSYNSNERNLIRS 60 Query: 85 DSIKKRSIK 93 D + +K Sbjct: 61 DFFLPKGVK 69 >gi|295096822|emb|CBK85912.1| exonuclease SbcC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 1043 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|296101516|ref|YP_003611662.1| exonuclease subunit SbcC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055975|gb|ADF60713.1| exonuclease subunit SbcC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 1043 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|295693198|ref|YP_003601808.1| DNA repair protein recn [Lactobacillus crispatus ST1] gi|295031304|emb|CBL50783.1| DNA repair protein RecN [Lactobacillus crispatus ST1] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|290510049|ref|ZP_06549419.1| nuclease SbcCD [Klebsiella sp. 1_1_55] gi|289776765|gb|EFD84763.1| nuclease SbcCD [Klebsiella sp. 1_1_55] Length = 266 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFVSNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|288936895|ref|YP_003440954.1| exonuclease SbcC [Klebsiella variicola At-22] gi|288891604|gb|ADC59922.1| exonuclease SbcC [Klebsiella variicola At-22] Length = 1045 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFVSNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|262042403|ref|ZP_06015564.1| nuclease SbcCD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040235|gb|EEW41345.1| nuclease SbcCD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 253 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|256843402|ref|ZP_05548890.1| DNA repair protein RecN [Lactobacillus crispatus 125-2-CHN] gi|293380306|ref|ZP_06626380.1| DNA repair protein RecN [Lactobacillus crispatus 214-1] gi|256614822|gb|EEU20023.1| DNA repair protein RecN [Lactobacillus crispatus 125-2-CHN] gi|290923121|gb|EFE00050.1| DNA repair protein RecN [Lactobacillus crispatus 214-1] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|238893321|ref|YP_002918055.1| exonuclease subunit SbcC [Klebsiella pneumoniae NTUH-K2044] gi|238545637|dbj|BAH61988.1| ATP-dependent dsDNA exonuclease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 1045 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|227878888|ref|ZP_03996793.1| DNA repair protein RecN [Lactobacillus crispatus JV-V01] gi|256849776|ref|ZP_05555207.1| DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|262046525|ref|ZP_06019486.1| DNA repair protein RecN [Lactobacillus crispatus MV-3A-US] gi|227861522|gb|EEJ69136.1| DNA repair protein RecN [Lactobacillus crispatus JV-V01] gi|256713265|gb|EEU28255.1| DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|260572974|gb|EEX29533.1| DNA repair protein RecN [Lactobacillus crispatus MV-3A-US] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|227893302|ref|ZP_04011107.1| DNA repair protein [Lactobacillus ultunensis DSM 16047] gi|227864882|gb|EEJ72303.1| DNA repair protein [Lactobacillus ultunensis DSM 16047] Length = 560 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|261340986|ref|ZP_05968844.1| nuclease sbcCD, subunit C [Enterobacter cancerogenus ATCC 35316] gi|288316851|gb|EFC55789.1| nuclease sbcCD, subunit C [Enterobacter cancerogenus ATCC 35316] Length = 1043 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|209921768|ref|YP_002295852.1| hypothetical protein ECSE_4577 [Escherichia coli SE11] gi|209915027|dbj|BAG80101.1| conserved hypothetical protein [Escherichia coli SE11] Length = 681 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 13/80 (16%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEW 72 RK + + + +FR F I+ A + + G NG GK+S+ AI Sbjct: 9 RKTNVLIKQLVLHNFRVFNGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRL 68 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 YG R G +++++ Sbjct: 69 ALYG---RLAFGPAMQQQEY 85 >gi|206578945|ref|YP_002240148.1| nuclease SbcCD, C subunit [Klebsiella pneumoniae 342] gi|206568003|gb|ACI09779.1| nuclease SbcCD, C subunit [Klebsiella pneumoniae 342] Length = 1045 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFVSNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|209551663|ref|YP_002283580.1| recombination protein F [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226737823|sp|B5ZWP8|RECF_RHILW RecName: Full=DNA replication and repair protein recF gi|209537419|gb|ACI57354.1| DNA replication and repair protein RecF [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 374 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + ++ ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYAAAA-LDLDGRHAVLTGDNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|152968911|ref|YP_001334020.1| exonuclease subunit SbcC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953760|gb|ABR75790.1| ATP-dependent dsDNA exonuclease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 1045 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60 >gi|154174431|ref|YP_001409103.1| prophage Lp2 protein 4 [Campylobacter curvus 525.92] gi|112802985|gb|EAU00329.1| prophage Lp2 protein 4 [Campylobacter curvus 525.92] Length = 558 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Query: 23 RKLIFKLLDIEISHFRGFTEIQ--------KIEFADHLTIVNGQNGYGKSSLS 67 + + + I I FR F+ +IE +H+T ++G NG GKS++ Sbjct: 4 KDMRIFIKKITIHDFRAFSGKNPDGSSKIYEIELGEHITCISGHNGIGKSTIL 56 >gi|315446139|ref|YP_004079018.1| hypothetical protein Mspyr1_46330 [Mycobacterium sp. Spyr1] gi|315264442|gb|ADU01184.1| hypothetical protein Mspyr1_46330 [Mycobacterium sp. Spyr1] Length = 917 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + F F +EFA L +V+G N GKSS A G + + G + Sbjct: 1 MRIDRVICTAFGPFRGET-LEFAPGLNVVHGPNEAGKSSWFNATYTALAGRRKYKGRGSA 59 >gi|301062745|ref|ZP_07203357.1| putative nuclease sbcCD, subunit C [delta proteobacterium NaphS2] gi|300443152|gb|EFK07305.1| putative nuclease sbcCD, subunit C [delta proteobacterium NaphS2] Length = 1083 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L++ + I+F D + + G G GKS++ +AI YG T R Sbjct: 1 MKILELRFKNLNSLYGEWFIDFTDPEYESNGIFALTGPTGAGKSTILDAICLALYGATPR 60 >gi|317151859|ref|YP_004119907.1| DNA repair ATPase-like protein [Desulfovibrio aespoeensis Aspo-2] gi|316942110|gb|ADU61161.1| DNA repair ATPase-like protein [Desulfovibrio aespoeensis Aspo-2] Length = 448 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + +F E ++E +T + G N GKS++ EA+ + Sbjct: 2 IRTIILENFMAH-ERTELELGPGITALTGANNTGKSAIVEALRCVAT 47 >gi|85059778|ref|YP_455480.1| recombination and repair protein [Sodalis glossinidius str. 'morsitans'] gi|84780298|dbj|BAE75075.1| DNA repair protein RecN [Sodalis glossinidius str. 'morsitans'] Length = 553 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F + I+F ++++ G+ G GKS +A+ G ++ Sbjct: 2 LAQLTIANFAIVRALT-IDFQSGMSVITGETGAGKSIAIDALGLCLGGRSEASM 54 >gi|37527248|ref|NP_930592.1| recombination and repair protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786682|emb|CAE15748.1| DNA repair protein recN (recombination protein N) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 553 Score = 42.3 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|313680849|ref|YP_004058588.1| DNA replication and repair protein recf [Oceanithermus profundus DSM 14977] gi|313153564|gb|ADR37415.1| DNA replication and repair protein RecF [Oceanithermus profundus DSM 14977] Length = 344 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +FR T ++ + + G N GK++L EAI G R D ++ Sbjct: 3 LTRLRQQNFRNLTSLELV-LPPGPLALVGPNASGKTNLLEAIFLALGGE-VRGALADRVR 60 Query: 89 KRSIK 93 + + Sbjct: 61 FGAAE 65 >gi|297807615|ref|XP_002871691.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] gi|297317528|gb|EFH47950.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] Length = 1052 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++DIE+ +F F + L +V G NG GKSSL AI G Q S+ Sbjct: 23 IIDIELHNFMTFNHLVCKP-GSRLNLVIGPNGSGKSSLVCAIALCLGGEPQLLGRATSV 80 >gi|229530200|ref|ZP_04419589.1| DNA recombination and repair protein RecF [Vibrio cholerae 12129(1)] gi|229332333|gb|EEN97820.1| DNA recombination and repair protein RecF [Vibrio cholerae 12129(1)] Length = 363 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLMIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|228964016|ref|ZP_04125146.1| hypothetical protein bthur0004_8760 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795668|gb|EEM43145.1| hypothetical protein bthur0004_8760 [Bacillus thuringiensis serovar sotto str. T04001] Length = 190 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I HFR F + Q I F +T++ G+NG GK+ + + + YG Sbjct: 1 MLIQKITFHHFRQFYDTQSITFAGVDNERLVTVILGENGRGKTGIYRGLLFGLYG 55 >gi|229156635|ref|ZP_04284723.1| hypothetical protein bcere0010_28200 [Bacillus cereus ATCC 4342] gi|228626804|gb|EEK83543.1| hypothetical protein bcere0010_28200 [Bacillus cereus ATCC 4342] Length = 884 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + + ++ G NG+GKSS +AIEW G R Sbjct: 2 GQVEFDLSKEVILLYGANGFGKSSFFDAIEWCLTGKINR 40 >gi|195953156|ref|YP_002121446.1| SMC domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932768|gb|ACG57468.1| SMC domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 514 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 21/32 (65%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 Q IEF + L ++ G++G GKS L +AI++ Sbjct: 16 QYIEFKEGLNVITGESGAGKSMLMDAIKFCLG 47 >gi|121727885|ref|ZP_01680944.1| recF protein [Vibrio cholerae V52] gi|121629829|gb|EAX62244.1| recF protein [Vibrio cholerae V52] Length = 363 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLMIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|15640046|ref|NP_062598.1| recombination protein F [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147675554|ref|YP_001218398.1| recombination protein F [Vibrio cholerae O395] gi|153819847|ref|ZP_01972514.1| recF protein [Vibrio cholerae NCTC 8457] gi|153821947|ref|ZP_01974614.1| recF protein [Vibrio cholerae B33] gi|227080251|ref|YP_002808802.1| recF protein [Vibrio cholerae M66-2] gi|229508299|ref|ZP_04397803.1| DNA recombination and repair protein RecF [Vibrio cholerae BX 330286] gi|229508862|ref|ZP_04398353.1| DNA recombination and repair protein RecF [Vibrio cholerae B33] gi|229515947|ref|ZP_04405404.1| DNA recombination and repair protein RecF [Vibrio cholerae TMA 21] gi|229517133|ref|ZP_04406579.1| DNA recombination and repair protein RecF [Vibrio cholerae RC9] gi|229606573|ref|YP_002877221.1| recombination protein F [Vibrio cholerae MJ-1236] gi|254225546|ref|ZP_04919155.1| recF protein [Vibrio cholerae V51] gi|254851579|ref|ZP_05240929.1| DNA replication and repair protein recF [Vibrio cholerae MO10] gi|298501199|ref|ZP_07010998.1| recombination protein F [Vibrio cholerae MAK 757] gi|13959488|sp|Q9KVX4|RECF_VIBCH RecName: Full=DNA replication and repair protein recF gi|172047499|sp|A5F493|RECF_VIBC3 RecName: Full=DNA replication and repair protein recF gi|254790498|sp|C3LP87|RECF_VIBCM RecName: Full=DNA replication and repair protein recF gi|9654405|gb|AAF93192.1| recF protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|125621866|gb|EAZ50191.1| recF protein [Vibrio cholerae V51] gi|126509608|gb|EAZ72202.1| recF protein [Vibrio cholerae NCTC 8457] gi|126520567|gb|EAZ77790.1| recF protein [Vibrio cholerae B33] gi|146317437|gb|ABQ21976.1| recF protein [Vibrio cholerae O395] gi|227008139|gb|ACP04351.1| recF protein [Vibrio cholerae M66-2] gi|227011983|gb|ACP08193.1| recF protein [Vibrio cholerae O395] gi|229346196|gb|EEO11168.1| DNA recombination and repair protein RecF [Vibrio cholerae RC9] gi|229347047|gb|EEO12009.1| DNA recombination and repair protein RecF [Vibrio cholerae TMA 21] gi|229354137|gb|EEO19069.1| DNA recombination and repair protein RecF [Vibrio cholerae B33] gi|229354572|gb|EEO19494.1| DNA recombination and repair protein RecF [Vibrio cholerae BX 330286] gi|229369228|gb|ACQ59651.1| DNA recombination and repair protein RecF [Vibrio cholerae MJ-1236] gi|254847284|gb|EET25698.1| DNA replication and repair protein recF [Vibrio cholerae MO10] gi|297540071|gb|EFH76133.1| recombination protein F [Vibrio cholerae MAK 757] Length = 363 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLMIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|85711940|ref|ZP_01042995.1| exonuclease SbcC, putative [Idiomarina baltica OS145] gi|85694337|gb|EAQ32280.1| exonuclease SbcC, putative [Idiomarina baltica OS145] Length = 1022 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L +++ F F Q I F L ++NG G GK++L +AI + YG T + Sbjct: 1 MKPLVLKMQAFGPFPTQQSINFTLLGEHPLFLINGATGAGKTTLLDAISFALYGETTGQD 60 Query: 83 HGDSIKKR 90 + Sbjct: 61 RIGKQMRC 68 >gi|238788240|ref|ZP_04632035.1| DNA repair protein recN [Yersinia frederiksenii ATCC 33641] gi|238723827|gb|EEQ15472.1| DNA repair protein recN [Yersinia frederiksenii ATCC 33641] Length = 553 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRSEGSM 54 >gi|313887660|ref|ZP_07821342.1| DNA replication and repair protein RecF [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846269|gb|EFR33648.1| DNA replication and repair protein RecF [Peptoniphilus harei ACS-146-V-Sch2b] Length = 357 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL + + +FR + + + +++ ++ G N GK++L E+I + R Sbjct: 1 MKLKHLRLFNFRNYKGLDFVP-GENINVLYGLNASGKTNLLESIYMSIRATSFRSLKD 57 >gi|289548265|ref|YP_003473253.1| ATP-dependent endonuclease of the OLD family-like protein [Thermocrinis albus DSM 14484] gi|289181882|gb|ADC89126.1| ATP-dependent endonuclease of the OLD family-like protein [Thermocrinis albus DSM 14484] Length = 561 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++ S+FR + +I + +T + G+N GKS+ + ++ +F +RR Sbjct: 1 MKIERVKCSNFRNL-DGVEIRLHEDITFIVGENNIGKSNFLDLLDIIF---NKRRFEEGD 56 Query: 87 IKKRSIKTPMPMCMAV 102 K TP+ + +++ Sbjct: 57 FKDPKNPTPIEIEISL 72 >gi|238754006|ref|ZP_04615365.1| DNA replication and repair protein recF [Yersinia ruckeri ATCC 29473] gi|238707758|gb|EEQ00117.1| DNA replication and repair protein recF [Yersinia ruckeri ATCC 29473] Length = 361 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLAPAAGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|237734655|ref|ZP_04565136.1| DNA repair protein [Mollicutes bacterium D7] gi|229382475|gb|EEO32566.1| DNA repair protein [Coprobacillus sp. D7] Length = 403 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +F + +++F +H+T++ G+ G GKS + +AI L +Q Sbjct: 2 LESIYIENF-AIIDRLEVDFHNHMTVLTGETGAGKSIIIDAIGQLMGNRSQSSFIKADCD 60 Query: 89 KRSIK 93 + I+ Sbjct: 61 ECFIE 65 >gi|257059400|ref|YP_003137288.1| hypothetical protein Cyan8802_1541 [Cyanothece sp. PCC 8802] gi|256589566|gb|ACV00453.1| hypothetical protein Cyan8802_1541 [Cyanothece sp. PCC 8802] Length = 131 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +I +F+ ++ + F D LTI+ G N GKS+ EA+ +L Sbjct: 3 LKLTSAKIQNFKSLGDVT-LNFRD-LTILVGANSSGKSNCLEALNFL 47 >gi|319401364|gb|EFV89575.1| exonuclease SbcC [Staphylococcus epidermidis FRI909] Length = 1009 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L I + +F F + I+F D L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPLHIVMENFGPFI-KESIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKT 59 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQLK 110 + ++ PM + YQ K Sbjct: 60 RKEGDLRSHFADGKSPMSVI-----YQFK 83 >gi|237727469|ref|ZP_04557950.1| DNA replication and repair protein recF [Bacteroides sp. D4] gi|229434325|gb|EEO44402.1| DNA replication and repair protein recF [Bacteroides dorei 5_1_36/D4] Length = 371 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++EF+ + GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQAELEFSPKMNCFIGQNGMGKTNLLDAVYYLSFCKSA 52 >gi|190341487|gb|ACE74820.1| RecN [Citrobacter sp. NZ3872_90] Length = 553 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T++ G+ G GKS +A+ G D+ Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGG------RADADM 54 Query: 89 KRSIKTPMPMC 99 R+ T +C Sbjct: 55 VRTDATRADLC 65 >gi|170759346|ref|YP_001787291.1| hypothetical protein CLK_1353 [Clostridium botulinum A3 str. Loch Maree] gi|169406335|gb|ACA54746.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch Maree] Length = 645 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++ + +F+G ++ I+F +T + G+NG GK+++ ++ +L + + Sbjct: 5 IFLKNLSLKNFKGIKDLT-IDFGK-VTNIFGENGTGKTTIQDSFTFLLFDKDSK 56 >gi|157147693|ref|YP_001455012.1| hypothetical protein CKO_03496 [Citrobacter koseri ATCC BAA-895] gi|157084898|gb|ABV14576.1| hypothetical protein CKO_03496 [Citrobacter koseri ATCC BAA-895] Length = 665 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + + + +FR F ++ A + L ++ G NG GK+S+ AI YG Sbjct: 3 ITKLVMRNFRVFRGEHVLDLAPNDEPGKPLILIGGLNGSGKTSILTAIRLALYGSQA 59 >gi|83595078|ref|YP_428830.1| hypothetical protein Rru_A3749 [Rhodospirillum rubrum ATCC 11170] gi|83577992|gb|ABC24543.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 394 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I++++ F E + L +V G NG GKS+L AIE Sbjct: 1 MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIE 45 >gi|56964224|ref|YP_175955.1| DNA repair protein RecN [Bacillus clausii KSM-K16] gi|56910467|dbj|BAD64994.1| DNA repair protein RecN [Bacillus clausii KSM-K16] Length = 565 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+++ I +F + + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LMELSIKNFAIIRSLT-VPFEKGLTVLTGETGAGKSIIIDAIALLLGG----RGSAEFVR 56 Query: 89 KRSIKTPMPMCMAV 102 + + A+ Sbjct: 57 FGEKRAEIEGLFAI 70 >gi|323464532|gb|ADX76685.1| exonuclease SbcC [Staphylococcus pseudintermedius ED99] Length = 1010 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F F + I+F+ + L +++G+ G GK+ + + I + YG K Sbjct: 1 MKPLKLHLQNFGPFLDET-IDFSRIQSNQLFLISGKTGSGKTMIFDGIVYALYGRASTEK 59 Query: 83 H 83 Sbjct: 60 R 60 >gi|319892365|ref|YP_004149240.1| Exonuclease SbcC [Staphylococcus pseudintermedius HKU10-03] gi|317162061|gb|ADV05604.1| Exonuclease SbcC [Staphylococcus pseudintermedius HKU10-03] Length = 1010 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F F + I+F+ + L +++G+ G GK+ + + I + YG K Sbjct: 1 MKPLKLHLQNFGPFLDET-IDFSRIQSNQLFLISGKTGSGKTMIFDGIVYALYGRASTEK 59 Query: 83 H 83 Sbjct: 60 R 60 >gi|315924417|ref|ZP_07920639.1| hypothetical protein HMP0721_0678 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622296|gb|EFV02255.1| hypothetical protein HMP0721_0678 [Pseudoramibacter alactolyticus ATCC 23263] Length = 800 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRK 82 K+ + + F F + IE D ++ G N GKS++ IE +F+G Y +RR Sbjct: 1 MKIKTLNLHAFGRF-KNTTIEVLDGFNLIFGPNEAGKSTIQAFIEGMFFGFYKPYRKRRT 59 Query: 83 HGDSIKK 89 + D ++ Sbjct: 60 YSDDYER 66 >gi|301166106|emb|CBW25681.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 574 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Query: 28 KLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L +++I +FR + + I+ D + ++ G N GKSS+ A E + D Sbjct: 10 RLKNLKIKNFRSIGKTEVSIDLDD-IVVLIGPNNVGKSSILNAYELIM---------KDG 59 Query: 87 IKKRSIKTP 95 K+ S+K Sbjct: 60 SKECSVKLE 68 >gi|227489394|ref|ZP_03919710.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090572|gb|EEI25884.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 1118 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++L +++ ++ F + ++ A ++ G +G GKS+L +A+ + + R + Sbjct: 10 YRLTTLQVYNWGTFNGLHTVDVARAGFLIFGPSGSGKSTLIDAVSTILGSPGRHRFN 66 >gi|190341495|gb|ACE74824.1| RecN [Citrobacter koseri] Length = 553 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T++ G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGG 48 >gi|190341491|gb|ACE74822.1| RecN [Citrobacter koseri] Length = 553 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T++ G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGG 48 >gi|166365571|ref|YP_001657844.1| DNA repair protein [Microcystis aeruginosa NIES-843] gi|166087944|dbj|BAG02652.1| DNA repair protein [Microcystis aeruginosa NIES-843] Length = 575 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I +F + ++ F + L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSCLQIENF-TLIDRLELTFGNGLNVLTGETGAGKSIILDAIDIVLGGKVNHRV 54 >gi|157148128|ref|YP_001455447.1| recombination and repair protein [Citrobacter koseri ATCC BAA-895] gi|157085333|gb|ABV15011.1| hypothetical protein CKO_03938 [Citrobacter koseri ATCC BAA-895] gi|190341493|gb|ACE74823.1| RecN [Citrobacter koseri] Length = 553 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T++ G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGG 48 >gi|153807585|ref|ZP_01960253.1| hypothetical protein BACCAC_01867 [Bacteroides caccae ATCC 43185] gi|149129947|gb|EDM21159.1| hypothetical protein BACCAC_01867 [Bacteroides caccae ATCC 43185] Length = 369 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E +I+F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EEVEIDFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSSGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|119486512|ref|ZP_01620570.1| hypothetical protein L8106_00920 [Lyngbya sp. PCC 8106] gi|119456414|gb|EAW37545.1| hypothetical protein L8106_00920 [Lyngbya sp. PCC 8106] Length = 382 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L ++I +FRGF + + ++ G+N GK+S+ EAI++L Sbjct: 2 LKTLKIENFRGFQSFELQSLGR-VNLLVGENNSGKTSILEAIQFLL 46 >gi|254820147|ref|ZP_05225148.1| hypothetical protein MintA_09481 [Mycobacterium intracellulare ATCC 13950] Length = 246 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG + + IEF D + +V G N GKSS+ EA++ L Sbjct: 1 MKLHRLILTNYRGISHRE-IEFPDHGVVVVCGANEIGKSSMIEALDLLL 48 >gi|13476986|ref|NP_108556.1| ABC transporter, ATP-binding protein [Mesorhizobium loti MAFF303099] gi|14027749|dbj|BAB54342.1| ABC transporter, ATP-binding protein [Mesorhizobium loti MAFF303099] Length = 258 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 FRG ++EF +TI+ G+NG GKS+L EAI GY + + Sbjct: 38 FRG--REFELEFTAPITIIVGENGTGKSTLLEAIG-ALAGYDEAGGGKGYM 85 >gi|313906261|ref|ZP_07839605.1| AAA ATPase [Eubacterium cellulosolvens 6] gi|313468881|gb|EFR64239.1| AAA ATPase [Eubacterium cellulosolvens 6] Length = 244 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 F ++TI G+NG GKS++ EAI YG+ + + + +C A+ Sbjct: 40 FNKNITIFVGENGSGKSTMLEAIAVC-YGFNPEGGTKNY-SFSTYDSHSELCDAI 92 >gi|293394813|ref|ZP_06639103.1| DNA repair protein RecN [Serratia odorifera DSM 4582] gi|291422564|gb|EFE95803.1| DNA repair protein RecN [Serratia odorifera DSM 4582] Length = 559 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 RK++ L + I++F E++ I+F +T + G+ G GKS +A+ R Sbjct: 3 RKVLM-LAQLTINNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGS----RA 56 Query: 83 HGDSIKKRSIK 93 G+++++ + + Sbjct: 57 DGNAVRQGASR 67 >gi|302916255|ref|XP_003051938.1| hypothetical protein NECHADRAFT_92410 [Nectria haematococca mpVI 77-13-4] gi|256732877|gb|EEU46225.1| hypothetical protein NECHADRAFT_92410 [Nectria haematococca mpVI 77-13-4] Length = 1163 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +F E +E + + G+NG GKS++ A+ G G S+K Sbjct: 121 VESITCYNFMCH-ERLHVELGPLINFIVGENGSGKSAVLTALTLCLGGKASDTNRGGSLK 179 >gi|325981036|ref|YP_004293438.1| hypothetical protein NAL212_0323 [Nitrosomonas sp. AL212] gi|325530555|gb|ADZ25276.1| hypothetical protein NAL212_0323 [Nitrosomonas sp. AL212] Length = 650 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL+ I++FR + + E +D LT + G+N GK+++ +A+ Sbjct: 1 MKLISAHITNFRSIEDSNQFEISD-LTCLVGKNEAGKTAILQAL 43 >gi|190341549|gb|ACE74851.1| RecN [Enterobacter pulveris] gi|190341553|gb|ACE74853.1| RecN [Enterobacter pulveris] Length = 553 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|190341547|gb|ACE74850.1| RecN [Enterobacter pulveris] gi|190341551|gb|ACE74852.1| RecN [Enterobacter pulveris] gi|190341555|gb|ACE74854.1| RecN [Enterobacter pulveris] gi|190341557|gb|ACE74855.1| RecN [Enterobacter pulveris] Length = 553 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + IS+F E++ I+F +T + G+ G GKS +A+ G + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTAITGETGAGKSIAIDALGLCLGGRAEA 52 >gi|224371390|ref|YP_002605554.1| hypothetical protein HRM2_43340 [Desulfobacterium autotrophicum HRM2] gi|223694107|gb|ACN17390.1| hypothetical protein HRM2_43340 [Desulfobacterium autotrophicum HRM2] Length = 1168 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L +++ F FTE +EF L I+ G N GKSS A++ L YG+ Q+ Sbjct: 1 MRLKRLDLKAFGPFTEKPPLEFNSKEPGLHIIFGSNEAGKSSSLRALKALLYGFPQQ 57 >gi|188585405|ref|YP_001916950.1| MukB N-terminal domain/M protein repeat protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350092|gb|ACB84362.1| MukB N-terminal domain/M protein repeat protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 1113 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++ ++ F++ D+ ++ G NG GKS+L +A++ + G + Sbjct: 4 LTKVKLVNWHFFSDETME--MDNSVLITGDNGAGKSTLIDALQVVLVGNLAK 53 >gi|78189267|ref|YP_379605.1| ATPase-like [Chlorobium chlorochromatii CaD3] gi|78171466|gb|ABB28562.1| ATPase-like protein [Chlorobium chlorochromatii CaD3] Length = 419 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + +++++ F E D LTI+ G N GKS+ +A+ +L + Sbjct: 2 IKQLTLTNWKSFAEATLY--IDPLTILIGTNASGKSNTLDALLFLQRVSS 49 >gi|332975153|gb|EGK12055.1| SMC protein family protein [Desmospora sp. 8437] Length = 970 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRK 82 KL + F + + + F + L ++ N GKS+L + L YG + RR Sbjct: 1 MKLKRVYFRGFGRWVDRE-FRFQEGLNLIEAPNESGKSTLIRGLTALLYGGKKEGVGRRV 59 Query: 83 HGDSIK 88 D ++ Sbjct: 60 REDWLE 65 >gi|303245771|ref|ZP_07332054.1| SMC domain protein [Desulfovibrio fructosovorans JJ] gi|302493034|gb|EFL52899.1| SMC domain protein [Desulfovibrio fructosovorans JJ] Length = 392 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWL 73 + +E+ F+ ++ + LTI+ G NG GKS++ A+ +L Sbjct: 1 MLIKRLEVKGFKSLKDVV---WEPGSLTILIGPNGSGKSNILLALSFL 45 >gi|170108557|ref|XP_001885487.1| predicted protein [Laccaria bicolor S238N-H82] gi|164639649|gb|EDR03919.1| predicted protein [Laccaria bicolor S238N-H82] Length = 340 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + IE+ F + F + + G NG GKS+ A+ G G IK Sbjct: 67 IEYIEMRQFMCHKYLT-FHFGPQINFITGHNGSGKSAALSALTVALGGKANSTGRGSGIK 125 >gi|89892835|ref|YP_516322.1| hypothetical protein DSY0089 [Desulfitobacterium hafniense Y51] gi|89332283|dbj|BAE81878.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 265 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F GF+ +EFA ++ G NG GKS+L +AI L Sbjct: 25 FSGFS----LEFAKGFNVILGPNGAGKSTLIKAIFGLLD 59 >gi|219666097|ref|YP_002456532.1| ABC transporter [Desulfitobacterium hafniense DCB-2] gi|219536357|gb|ACL18096.1| ABC transporter related [Desulfitobacterium hafniense DCB-2] Length = 264 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F GF+ +EFA ++ G NG GKS+L +AI L Sbjct: 24 FSGFS----LEFAKGFNVILGPNGAGKSTLIKAIFGLLD 58 >gi|66359718|ref|XP_627037.1| Smc like ABC ATpase involved in DNA repair [Cryptosporidium parvum Iowa II] gi|46228476|gb|EAK89346.1| Smc like ABC ATpase involved in DNA repair [Cryptosporidium parvum Iowa II] Length = 1314 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L+ IE+ ++ K F + + I+ G NG GKSS++ I T G + Sbjct: 44 LISIELENWMNIKGPTKYCFNNGVNIITGLNGSGKSSVACGIAISLGYDTHILARGHYL 102 >gi|313126069|ref|YP_004036339.1| hypothetical protein Hbor_13110 [Halogeometricum borinquense DSM 11551] gi|312292434|gb|ADQ66894.1| hypothetical protein Hbor_13110 [Halogeometricum borinquense DSM 11551] Length = 1186 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+ + +V G N GKS+L+EAI W Sbjct: 49 FSPGVNVVYGANAAGKSTLAEAIRWSL 75 >gi|296447171|ref|ZP_06889102.1| DNA replication and repair protein RecF [Methylosinus trichosporium OB3b] gi|296255336|gb|EFH02432.1| DNA replication and repair protein RecF [Methylosinus trichosporium OB3b] Length = 382 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + ++ FR + + I L + G+NG GK+++ EA+ G R G I Sbjct: 11 RVRRLRLADFRSYAALD-IAILSPLVALTGENGAGKTNILEALSLFSPG---RGLRGAEI 66 Query: 88 KKRSIKT 94 + + + Sbjct: 67 AECARRQ 73 >gi|295103682|emb|CBL01226.1| SMC proteins Flexible Hinge Domain. [Faecalibacterium prausnitzii SL3/3] Length = 1099 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L +++ ++ F E + A LT + G N GK+++ +AI + Sbjct: 1 MIELKRLKLINWHNF-ENTTFDCAR-LTYMIGVNAVGKTTILDAIRYCLTTN 50 >gi|269964010|ref|ZP_06178316.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831229|gb|EEZ85382.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 587 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 27 FKLLDIEISHFRGFTE--IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL+ I I +G + +++F DH+T + G NG GK+ + +++ + Sbjct: 1 MKLISIRIVG-KGVSGWFSDELKFGDHITHLWGPNGCGKTPIVQSVAFCLG 50 >gi|258545194|ref|ZP_05705428.1| DNA replication and repair protein RecF [Cardiobacterium hominis ATCC 15826] gi|258519546|gb|EEV88405.1| DNA replication and repair protein RecF [Cardiobacterium hominis ATCC 15826] Length = 359 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + + R +E T+++G+NG GK++L EAI L G + R Sbjct: 3 RLRQLRLDNHRNLA-TTTLELHPRCTLISGKNGSGKTALLEAIYLLGRGKSFR 54 >gi|162455459|ref|YP_001617826.1| hypothetical protein sce7177 [Sorangium cellulosum 'So ce 56'] gi|161166041|emb|CAN97346.1| hypothetical protein sce7177 [Sorangium cellulosum 'So ce 56'] Length = 1329 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + K+L++ + F FT++ +++F+ L +V G N GKS+ AI L YG Sbjct: 28 LVKILELHLLAFGPFTDL-RLDFSSPSPGLHVVYGPNEAGKSTALRAIRGLLYGIPH 83 >gi|160944314|ref|ZP_02091543.1| hypothetical protein FAEPRAM212_01825 [Faecalibacterium prausnitzii M21/2] gi|158444496|gb|EDP21500.1| hypothetical protein FAEPRAM212_01825 [Faecalibacterium prausnitzii M21/2] Length = 1099 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L +++ ++ F E + A LT + G N GK+++ +AI + Sbjct: 1 MIELKRLKLINWHNF-ENTTFDCAR-LTYMIGVNAVGKTTILDAIRYCLTTN 50 >gi|113968349|ref|YP_732142.1| recombination protein F [Shewanella sp. MR-4] gi|123325558|sp|Q0HPD2|RECF_SHESM RecName: Full=DNA replication and repair protein recF gi|113883033|gb|ABI37085.1| DNA replication and repair protein RecF [Shewanella sp. MR-4] Length = 360 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I FR ++ ++ + + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLIRLNIDSFRNI-QLAQLSPSSGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|117918470|ref|YP_867662.1| recombination protein F [Shewanella sp. ANA-3] gi|166221866|sp|A0KR37|RECF_SHESA RecName: Full=DNA replication and repair protein recF gi|117610802|gb|ABK46256.1| DNA replication and repair protein RecF [Shewanella sp. ANA-3] Length = 360 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I FR ++ ++ + + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLIRLNIDSFRNI-QLAQLSPSSGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|114045516|ref|YP_736066.1| recombination protein F [Shewanella sp. MR-7] gi|123131882|sp|Q0I0U6|RECF_SHESR RecName: Full=DNA replication and repair protein recF gi|113886958|gb|ABI41009.1| DNA replication and repair protein RecF [Shewanella sp. MR-7] Length = 360 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I FR ++ ++ + + ++ GQNG GK+S+ EAI +L G + R Sbjct: 1 MSLIRLNIDSFRNI-QLAQLSPSSGINLIYGQNGSGKTSILEAIYFLGMGRSFRS 54 >gi|301511025|ref|ZP_07236262.1| Exonuclease sbcC [Acinetobacter baumannii AB058] Length = 706 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|302335250|ref|YP_003800457.1| hypothetical protein Olsu_0458 [Olsenella uli DSM 7084] gi|301319090|gb|ADK67577.1| hypothetical protein Olsu_0458 [Olsenella uli DSM 7084] Length = 396 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAI 70 ++KL+ + + +FR F + Q + A +T V G N GKS++++A+ Sbjct: 1 MYKLVSLTVGNFRSFCDPQTLTLDGRSAHSVTAVFGPNAGGKSNIAKAL 49 >gi|260555790|ref|ZP_05828010.1| ATPase [Acinetobacter baumannii ATCC 19606] gi|260410701|gb|EEX03999.1| ATPase [Acinetobacter baumannii ATCC 19606] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|260552474|ref|ZP_05825850.1| exonuclease sbcC [Acinetobacter sp. RUH2624] gi|260405281|gb|EEW98777.1| exonuclease sbcC [Acinetobacter sp. RUH2624] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|239503165|ref|ZP_04662475.1| ATPase [Acinetobacter baumannii AB900] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|238917986|ref|YP_002931500.1| recombination protein F [Edwardsiella ictaluri 93-146] gi|259563363|sp|C5BHC7|RECF_EDWI9 RecName: Full=DNA replication and repair protein recF gi|238867554|gb|ACR67265.1| DNA replication and repair protein RecF [Edwardsiella ictaluri 93-146] Length = 358 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLVIRDFRNI-EEADLALAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|229589429|ref|YP_002871548.1| hypothetical protein PFLU1914 [Pseudomonas fluorescens SBW25] gi|229361295|emb|CAY48159.1| hypothetical protein PFLU_1914 [Pseudomonas fluorescens SBW25] Length = 1297 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 9/67 (13%) Query: 26 IFKLLDIEISHFRG--FTEIQK-------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 IF L I+ F G + + +T+ G NG GK+SL +I W G Sbjct: 93 IFSLASIQAHQFAGLHHAGTTQAKPNDFAFDIESGVTLFEGYNGCGKTSLINSIIWALTG 152 Query: 77 YTQRRKH 83 R + Sbjct: 153 EVLRPQR 159 >gi|193076644|gb|ABO11331.2| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii ATCC 17978] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|184157170|ref|YP_001845509.1| ATPase [Acinetobacter baumannii ACICU] gi|332874171|ref|ZP_08442095.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6014059] gi|183208764|gb|ACC56162.1| ATPase [Acinetobacter baumannii ACICU] gi|322507067|gb|ADX02521.1| sbcC [Acinetobacter baumannii 1656-2] gi|323516934|gb|ADX91315.1| ATPase [Acinetobacter baumannii TCDC-AB0715] gi|332737646|gb|EGJ68549.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6014059] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|169634027|ref|YP_001707763.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter baumannii SDF] gi|169152819|emb|CAP01842.1| ATP-dependent dsDNA exonuclease (Suppression of recBC) [Acinetobacter baumannii] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|169796920|ref|YP_001714713.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter baumannii AYE] gi|213156677|ref|YP_002318338.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057] gi|215484382|ref|YP_002326613.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294] gi|301345280|ref|ZP_07226021.1| Exonuclease sbcC [Acinetobacter baumannii AB056] gi|301595731|ref|ZP_07240739.1| Exonuclease sbcC [Acinetobacter baumannii AB059] gi|332853755|ref|ZP_08434967.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150] gi|332871125|ref|ZP_08439723.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113] gi|169149847|emb|CAM87738.1| ATP-dependent dsDNA exonuclease (Suppression of recBC) [Acinetobacter baumannii AYE] gi|213055837|gb|ACJ40739.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057] gi|213988948|gb|ACJ59247.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294] gi|332728441|gb|EGJ59816.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150] gi|332731711|gb|EGJ62992.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113] Length = 1198 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|87120233|ref|ZP_01076128.1| DNA repair protein RecN [Marinomonas sp. MED121] gi|86164336|gb|EAQ65606.1| DNA repair protein RecN [Marinomonas sp. MED121] Length = 561 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I I +F E ++E +T+++G+ G GKS + +A+ T R Sbjct: 2 LTSIAIKNF-AIVESLELELKQGMTVISGETGAGKSIMVDALSLCLGARTDSRV 54 >gi|313888022|ref|ZP_07821700.1| DNA repair protein RecN [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845977|gb|EFR33360.1| DNA repair protein RecN [Peptoniphilus harei ACS-146-V-Sch2b] Length = 553 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F E KIEF L ++ G+ G GKS + +++ + +R + D IK Sbjct: 2 LLELNIENF-AIIENMKIEFEPSLNVLTGETGSGKSIIIDSLGLVLG----QRANKDIIK 56 Query: 89 K 89 K Sbjct: 57 K 57 >gi|169347326|ref|ZP_02866264.1| hypothetical protein CLOSPI_00041 [Clostridium spiroforme DSM 1552] gi|169293943|gb|EDS76076.1| hypothetical protein CLOSPI_00041 [Clostridium spiroforme DSM 1552] Length = 1001 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +S F + + +I F D L ++ G G GK+ + +AI + YG + + + Sbjct: 1 MSAFGPYQNVVEINFDIFKQDGLFLITGPTGAGKTMIFDAITFALYGVSSGGERSVEQFR 60 Query: 90 RS 91 + Sbjct: 61 CN 62 >gi|103487192|ref|YP_616753.1| recombination protein F [Sphingopyxis alaskensis RB2256] gi|98977269|gb|ABF53420.1| DNA replication and repair protein RecF [Sphingopyxis alaskensis RB2256] Length = 369 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L+ + ++ FR + A L ++G NG GK+++ EAI L G RR Sbjct: 1 MTLVRLSLTDFRNHAG-ADLAAAPGLVALHGDNGAGKTNILEAISLLAPGRGLRRAPLSD 59 Query: 87 IKKRS 91 + + Sbjct: 60 MVRDG 64 >gi|77164223|ref|YP_342748.1| ATP-dependent dsDNA exonuclease (SbcC) [Nitrosococcus oceani ATCC 19707] gi|76882537|gb|ABA57218.1| ATP-dependent dsDNA exonuclease (SbcC) [Nitrosococcus oceani ATCC 19707] Length = 1091 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MRIRQVRFKNLNSLVGEWEIDLTHPAFVSDGIFAITGPTGAGKTTILDAICMALYGRTPR 60 Query: 81 ----RKHGDSIKKRS 91 K G+ I R Sbjct: 61 LNKVTKRGNEIMSRQ 75 >gi|84684519|ref|ZP_01012420.1| recombination protein F [Maritimibacter alkaliphilus HTCC2654] gi|84667498|gb|EAQ13967.1| recombination protein F [Rhodobacterales bacterium HTCC2654] Length = 371 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ +SHFR + + G+NG GK+++ EA+ + G R + Sbjct: 4 LYLRELTLSHFRSHR-RAVLSLDARPIAIFGRNGAGKTNILEAVSLMSPGRGLRGASAED 62 Query: 87 IKKR 90 + +R Sbjct: 63 MARR 66 >gi|315446087|ref|YP_004078966.1| hypothetical protein Mspyr1_45800 [Mycobacterium sp. Spyr1] gi|315264390|gb|ADU01132.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length = 1130 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F+D ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHDIPFSDGGALIAGASGSGKSSLLDAI 48 >gi|308814407|ref|YP_003934681.1| recombination endonuclease subunit [Shigella phage SP18] gi|308205999|gb|ADO19398.1| recombination endonuclease subunit [Shigella phage SP18] Length = 560 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Query: 27 FKLLDIEISHFRGF-TEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKL + + + +E T+V G+NG GKS+ EA+ + +G R Sbjct: 4 FKLKKVIYKNIMSVGAQPITVELDKVQKTLVTGKNGAGKSTFLEAVTFAMFGKPFRDVKK 63 Query: 85 DSIKKRSIKTPM 96 + S K M Sbjct: 64 GQLINSSNKKDM 75 >gi|111020658|ref|YP_703630.1| recombination protein F [Rhodococcus jostii RHA1] gi|123340329|sp|Q0SAG4|RECF_RHOSR RecName: Full=DNA replication and repair protein recF gi|110820188|gb|ABG95472.1| DNA replication and repair protein [Rhodococcus jostii RHA1] Length = 410 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + + + T+ G NG+GK+++ EA+ +L + R Sbjct: 1 MFVRALSLRDFRSW-DALGLTLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAP 59 Query: 87 IKKRSIKT 94 + + Sbjct: 60 LIRTGTGQ 67 >gi|255009776|ref|ZP_05281902.1| hypothetical protein Bfra3_11616 [Bacteroides fragilis 3_1_12] gi|313147565|ref|ZP_07809758.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136332|gb|EFR53692.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 663 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +++G E I+F++ T + G N GKS++ +A WL +G Sbjct: 6 LKRLSLVNWKGQKER-SIDFSNE-TSICGANATGKSTMFDAFIWLLFG 51 >gi|169334730|ref|ZP_02861923.1| hypothetical protein ANASTE_01136 [Anaerofustis stercorihominis DSM 17244] gi|169257468|gb|EDS71434.1| hypothetical protein ANASTE_01136 [Anaerofustis stercorihominis DSM 17244] Length = 816 Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRK 82 K+ + I F F + + IEF + L IV G N GKS+ + I+ +F+G Y++ + Sbjct: 1 MKIKKLGIKSFGKFQDKE-IEFKNGLNIVYGNNEAGKSTTHKFIQGMFFGFFKPYSKNKL 59 Query: 83 HGDSIKK 89 + D K+ Sbjct: 60 YSDEYKR 66 >gi|296415904|ref|XP_002837624.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633500|emb|CAZ81815.1| unnamed protein product [Tuber melanosporum] Length = 1194 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 35 SHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + E IE F+ ++ G NG GKS+ AI ++ Sbjct: 23 TGSNSYKEQTVIEPFSPKTNVIVGHNGSGKSNFFAAIRFVL 63 >gi|218778627|ref|YP_002429945.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760011|gb|ACL02477.1| SMC domain protein [Desulfatibacillum alkenivorans AK-01] Length = 1223 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+F + + ++G G GK+++ +AI YG T R Sbjct: 1 MRILRLRFKNLNSLPGEWEIDFNSVDYTSSGIFTISGPTGSGKTTVLDAICLALYGQTPR 60 >gi|149917970|ref|ZP_01906464.1| hypothetical protein PPSIR1_37144 [Plesiocystis pacifica SIR-1] gi|149821236|gb|EDM80640.1| hypothetical protein PPSIR1_37144 [Plesiocystis pacifica SIR-1] Length = 447 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L + E+ +EF L ++ G NG GK+ + + I W+ G Sbjct: 2 LTSLHTRGVGPIAEMT-LEFGPRLNVLTGDNGLGKTFVLDLIWWVLTGS 49 >gi|146420544|ref|XP_001486227.1| hypothetical protein PGUG_01898 [Meyerozyma guilliermondii ATCC 6260] Length = 1058 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHGDS 86 ++ + +++F ++ + + + L ++ G NG GKS+L AI G + RRK S Sbjct: 15 IVSVRVTNFTTYS-NAEFQLSPTLNMIIGPNGTGKSTLVAAICLGLGGKIELIRRKTLKS 73 Query: 87 IKKRS 91 + K Sbjct: 74 MIKTG 78 >gi|138894207|ref|YP_001124660.1| cation ABC transporter [Geobacillus thermodenitrificans NG80-2] gi|196250693|ref|ZP_03149381.1| ABC transporter-related protein [Geobacillus sp. G11MC16] gi|134265720|gb|ABO65915.1| Cation ABC transporter [Geobacillus thermodenitrificans NG80-2] gi|196209772|gb|EDY04543.1| ABC transporter-related protein [Geobacillus sp. G11MC16] Length = 484 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Query: 34 ISHFRGFTEIQ-KIEFADHLT------IVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + FRGF + + KI ++ + V G+NG GKS+L A+ L R GD Sbjct: 259 LRDFRGFRKREVKISVSEAVVRAGEWIAVTGRNGAGKSTLLHALMQLIRTQGDYRLLGDD 318 Query: 87 IKKRS 91 +K+R Sbjct: 319 VKQRQ 323 >gi|91205916|ref|YP_538271.1| DNA repair protein RecN [Rickettsia bellii RML369-C] gi|157826723|ref|YP_001495787.1| DNA repair protein RecN [Rickettsia bellii OSU 85-389] gi|122425341|sp|Q1RHI2|RECN_RICBR RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|91069460|gb|ABE05182.1| DNA repair protein RecN [Rickettsia bellii RML369-C] gi|157802027|gb|ABV78750.1| DNA repair protein RecN [Rickettsia bellii OSU 85-389] Length = 550 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + +F + +IEF + L ++ G+ G GKS L +AI + Sbjct: 3 HSLSVKNF-ILIDELEIEFTNGLCVITGETGAGKSILLDAILFCLG 47 >gi|304406741|ref|ZP_07388396.1| exonuclease, putative [Paenibacillus curdlanolyticus YK9] gi|304344274|gb|EFM10113.1| exonuclease, putative [Paenibacillus curdlanolyticus YK9] Length = 1031 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 32 IEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++++ F + + + I+F + L +++G G GK++L +AI + YG ++ Sbjct: 6 LKLAAFGPYRDGETIDFTELGDRRLFVISGNTGAGKTTLFDAICFALYGAASGEDRAEAR 65 Query: 88 KKRS 91 RS Sbjct: 66 MLRS 69 >gi|159027952|emb|CAO87115.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 438 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F+ + E + A +T + G N GKS+ EAI + + D I+ Sbjct: 2 LTSLTLRNFKSYQEAT-LSLAP-ITFLIGANASGKSNALEAIR--LLSWLAKGSRLDDIE 57 Query: 89 K 89 + Sbjct: 58 R 58 >gi|160875630|ref|YP_001554946.1| ATP-dependent OLD family endonuclease [Shewanella baltica OS195] gi|160861152|gb|ABX49686.1| ATP-dependent endonuclease of the OLD family-like protein [Shewanella baltica OS195] gi|315267819|gb|ADT94672.1| hypothetical protein Sbal678_2520 [Shewanella baltica OS678] Length = 613 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL I IS F+G + +I D ++ G+N GKS++ A++ G Sbjct: 1 MIKLKKIAISGFKGISGRVEIPAKD-FNVIVGKNDAGKSTVLRALDLFING 50 >gi|84501258|ref|ZP_00999463.1| recombination protein F [Oceanicola batsensis HTCC2597] gi|84390549|gb|EAQ03037.1| recombination protein F [Oceanicola batsensis HTCC2597] Length = 367 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +SHFR + + ++G NG GK+SL EA+ G RR + + Sbjct: 6 LTRLTLSHFRSYRHAALAPDGRPV-AIHGANGAGKTSLLEAVSMFSPGRGLRRAAAEDLI 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|120553505|ref|YP_957856.1| SMC domain-containing protein [Marinobacter aquaeolei VT8] gi|120323354|gb|ABM17669.1| SMC domain protein [Marinobacter aquaeolei VT8] Length = 1091 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MRILQVRFKNLNSLVGEWEIDLMHPAFASDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|323466280|gb|ADX69967.1| RecN ATPase involved in DNA repair [Lactobacillus helveticus H10] Length = 560 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L +Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGSRSQKEM 54 >gi|313897528|ref|ZP_07831070.1| exonuclease SbcCD, C subunit [Clostridium sp. HGF2] gi|312957480|gb|EFR39106.1| exonuclease SbcCD, C subunit [Clostridium sp. HGF2] Length = 1008 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ F + + Q I F HL ++ G+ G GK+ L +A+ + YG + + Sbjct: 1 MRPEILKLQAFGPYVKQQCINFHVFDEQHLFLIQGETGSGKTMLLDAMTYALYGKSSGSQ 60 Query: 83 HGD 85 D Sbjct: 61 RED 63 >gi|166363290|ref|YP_001655563.1| hypothetical protein MAE_05490 [Microcystis aeruginosa NIES-843] gi|166085663|dbj|BAG00371.1| hypothetical protein MAE_05490 [Microcystis aeruginosa NIES-843] Length = 383 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L ++I FRGF + + ++ G+N GK+S+ EAI++L Sbjct: 2 LQSLKIEGFRGFQNFEMANLGR-INLLVGKNNSGKTSILEAIQFL 45 >gi|161507734|ref|YP_001577695.1| DNA repair protein [Lactobacillus helveticus DPC 4571] gi|160348723|gb|ABX27397.1| DNA repair protein [Lactobacillus helveticus DPC 4571] Length = 560 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L +Q+ Sbjct: 2 LVELDIKNF-AIIKSLKVRFQEKMTVIIGETGAGKSIIIDAVSLLMGSRSQKEM 54 >gi|121534490|ref|ZP_01666313.1| DNA repair protein RecN [Thermosinus carboxydivorans Nor1] gi|121306983|gb|EAX47902.1| DNA repair protein RecN [Thermosinus carboxydivorans Nor1] Length = 570 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + +++F + ++EFA L I+ G+ G GKS L +A+ L T Sbjct: 2 LKSLTVTNF-ALIDQAQVEFAPGLNILTGETGAGKSILIDALNTLLGSRTSADL 54 >gi|121594800|ref|YP_986696.1| hypothetical protein Ajs_2459 [Acidovorax sp. JS42] gi|120606880|gb|ABM42620.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 606 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K++ + IS+FRG ++ + F D T++ G N GKS+L EA++ + Sbjct: 1 MKVVRLTISNFRGIKSVELL-F-DGHTLMVGSNNVGKSTLCEALDLVLG 47 >gi|332668242|ref|YP_004451030.1| SMC domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337056|gb|AEE54157.1| SMC domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 1215 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I + +I+F L + G G GKS++ +AI YG R Sbjct: 1 MKIRKLTIKNLHSLRLDAEIDFVSAPLGTSGLFAITGDTGAGKSTILDAITLALYGELPR 60 >gi|190341581|gb|ACE74867.1| RecN [Escherichia vulneris] Length = 553 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T + G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGG 48 >gi|332076309|gb|EGI86775.1| DNA helicase associated protein [Streptococcus pneumoniae GA41301] Length = 640 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHGDS 86 I++F+ F E Q I F + T++ G N GK+++ +A+ LF + R Sbjct: 3 INNFKSFGECQAINFNNQ-TVLIGNNSSGKTTVLQALSKLFSDKQSDRIIRKSD 55 >gi|330999967|ref|ZP_08323664.1| exonuclease SbcCD, C subunit [Parasutterella excrementihominis YIT 11859] gi|329573191|gb|EGG54806.1| exonuclease SbcCD, C subunit [Parasutterella excrementihominis YIT 11859] Length = 1224 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + I+F + + G G GK+++ +AI YG+T R Sbjct: 1 MQILKLSFENINSLKGAWTIDFQAPDFRSGIFAIVGPTGSGKTTILDAICLALYGHTPR 59 >gi|330827227|ref|YP_004390530.1| SMC domain-containing protein [Alicycliphilus denitrificans K601] gi|329312599|gb|AEB87014.1| SMC domain protein [Alicycliphilus denitrificans K601] Length = 945 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVSLPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|326404180|ref|YP_004284262.1| hypothetical protein ACMV_20330 [Acidiphilium multivorum AIU301] gi|325051042|dbj|BAJ81380.1| hypothetical protein ACMV_20330 [Acidiphilium multivorum AIU301] Length = 634 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I + F+ TE I + +TI+ G NG GKSS+ +AI W + Sbjct: 73 LDSITVRKFKA-TEEAVIPVSR-VTILVGPNGCGKSSVLQAIHWAARAAS 120 >gi|319765032|ref|YP_004128969.1| smc domain protein [Alicycliphilus denitrificans BC] gi|317119593|gb|ADV02082.1| SMC domain protein [Alicycliphilus denitrificans BC] Length = 945 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVSLPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|257879358|ref|ZP_05659011.1| DNA repair protein RecN [Enterococcus faecium 1,230,933] gi|257881776|ref|ZP_05661429.1| DNA repair protein RecN [Enterococcus faecium 1,231,502] gi|257885170|ref|ZP_05664823.1| DNA repair protein RecN [Enterococcus faecium 1,231,501] gi|257890184|ref|ZP_05669837.1| DNA repair protein RecN [Enterococcus faecium 1,231,410] gi|257893512|ref|ZP_05673165.1| DNA repair protein RecN [Enterococcus faecium 1,231,408] gi|260558800|ref|ZP_05830989.1| DNA repair protein RecN [Enterococcus faecium C68] gi|261206510|ref|ZP_05921210.1| DNA repair protein RecN [Enterococcus faecium TC 6] gi|257813586|gb|EEV42344.1| DNA repair protein RecN [Enterococcus faecium 1,230,933] gi|257817434|gb|EEV44762.1| DNA repair protein RecN [Enterococcus faecium 1,231,502] gi|257821022|gb|EEV48156.1| DNA repair protein RecN [Enterococcus faecium 1,231,501] gi|257826544|gb|EEV53170.1| DNA repair protein RecN [Enterococcus faecium 1,231,410] gi|257829891|gb|EEV56498.1| DNA repair protein RecN [Enterococcus faecium 1,231,408] gi|260075259|gb|EEW63572.1| DNA repair protein RecN [Enterococcus faecium C68] gi|260079220|gb|EEW66911.1| DNA repair protein RecN [Enterococcus faecium TC 6] Length = 561 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D Sbjct: 1 MMLQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDY 55 Query: 87 IKKRSIKTPMPMCMAVPR 104 I++ + K + +P+ Sbjct: 56 IRQGAEKCVLEGLFELPK 73 >gi|240173088|ref|ZP_04751746.1| hypothetical protein MkanA1_27496 [Mycobacterium kansasii ATCC 12478] Length = 297 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG T + I F D + +V G N GKSS+ EA++ L D Sbjct: 1 MKLHRLVVTNYRGITHRE-IAFPDHGVVVVCGANESGKSSMIEALDLLLES-------KD 52 Query: 86 SIKKRSIKTPMPMC 99 K+ +K P Sbjct: 53 RSTKKEVKQVKPTN 66 >gi|262200049|ref|YP_003271257.1| DNA replication and repair protein RecF [Gordonia bronchialis DSM 43247] gi|262083396|gb|ACY19364.1| DNA replication and repair protein RecF [Gordonia bronchialis DSM 43247] Length = 397 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++ + FR + +E A T+ G+NG+GK+++ EA+++L + R Sbjct: 1 MFVRELHLRDFRSWR-TADLELAAEPTVFTGRNGFGKTNILEALQYLATLRSHR 53 >gi|195144878|ref|XP_002013423.1| GL24134 [Drosophila persimilis] gi|194102366|gb|EDW24409.1| GL24134 [Drosophila persimilis] Length = 1119 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 1/82 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ I + +F E +EF + + G+NG GKS+ A+ G + SI Sbjct: 93 KVISIHLENFMCH-ESFTVEFGPNTNFLVGKNGSGKSATLTALTVGMGGNARATSRAASI 151 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 K + + C L Sbjct: 152 TKLIKNGETSAKIEITLCNVGL 173 >gi|209549897|ref|YP_002281814.1| ATP-dependent endonuclease of the OLD family-like protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535653|gb|ACI55588.1| ATP-dependent endonuclease of the OLD family-like protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 496 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 29 LLDIEISHFRGFTEIQ------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I +FR F+ LT+ G NG GK+S EA+++LF G Sbjct: 8 IRELSIDNFRCFSAETINLAVPNGSLGSGLTLFVGNNGTGKTSALEALDYLFGG 61 >gi|52080957|ref|YP_079748.1| hypothetical protein BL01520 [Bacillus licheniformis ATCC 14580] gi|52786333|ref|YP_092162.1| hypothetical protein BLi02595 [Bacillus licheniformis ATCC 14580] gi|319645085|ref|ZP_07999318.1| RecN protein [Bacillus sp. BT1B_CT2] gi|52004168|gb|AAU24110.1| RecN [Bacillus licheniformis ATCC 14580] gi|52348835|gb|AAU41469.1| RecN [Bacillus licheniformis ATCC 14580] gi|317392894|gb|EFV73688.1| RecN protein [Bacillus sp. BT1B_CT2] Length = 576 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +A+ L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFEKGLTVLTGETGAGKSIIIDAVSLLVGG----RGSSEYVR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 YGEKRAELE 65 >gi|303257483|ref|ZP_07343496.1| putative exonuclease [Burkholderiales bacterium 1_1_47] gi|302859840|gb|EFL82918.1| putative exonuclease [Burkholderiales bacterium 1_1_47] Length = 1224 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + I+F + + G G GK+++ +AI YG+T R Sbjct: 1 MQILKLSFENINSLKGAWTIDFQAPDFRSGIFAIVGPTGSGKTTILDAICLALYGHTPR 59 >gi|302381120|ref|YP_003816943.1| SMC domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302191748|gb|ADK99319.1| SMC domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 381 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + ++ FR + + +++G NG GK++L EA+ G R + Sbjct: 2 IRALTLTDFRSYAAAT-LSVETGPVVLHGPNGAGKTNLLEALSLFTPGKGLRAATAQEMG 60 Query: 89 KR 90 +R Sbjct: 61 RR 62 >gi|226329139|ref|ZP_03804657.1| hypothetical protein PROPEN_03042 [Proteus penneri ATCC 35198] gi|225202325|gb|EEG84679.1| hypothetical protein PROPEN_03042 [Proteus penneri ATCC 35198] Length = 169 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI F ++ L + G G GK++L +AI Y R Sbjct: 1 MKILSLRFKNINSLKGEWKINFNQEPFVSNGLFAITGPTGAGKTTLLDAISLALY---HR 57 Query: 81 RKHGDSIKKRSIK 93 D + + + Sbjct: 58 TPRLDKVTQSQNE 70 >gi|222112637|ref|YP_002554901.1| smc domain-containing protein [Acidovorax ebreus TPSY] gi|221732081|gb|ACM34901.1| SMC domain protein [Acidovorax ebreus TPSY] Length = 944 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVSLPLDGSIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|153869104|ref|ZP_01998792.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152074341|gb|EDN71205.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 446 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 1/72 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +FR + + LT++ G N GK+++ +AI Sbjct: 1 MKISHITIENFRAI-KKLDLPLDPQLTVLVGNNAAGKTTILDAIAVGLGAILTHLPSVSG 59 Query: 87 IKKRSIKTPMPM 98 IK R + Sbjct: 60 IKFRQSDIREEL 71 >gi|126656081|ref|ZP_01727465.1| hypothetical protein CY0110_03324 [Cyanothece sp. CCY0110] gi|126622361|gb|EAZ93067.1| hypothetical protein CY0110_03324 [Cyanothece sp. CCY0110] Length = 661 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 7/61 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ + +F + I + ++ G NG GK++L +AI YG Sbjct: 1 MLFTELVLENFGPYAGKNIINLQTEKDNETRPIILIGGMNGGGKTTLMDAIRLALYGQRA 60 Query: 80 R 80 + Sbjct: 61 Q 61 >gi|121596398|ref|YP_988294.1| SMC domain-containing protein [Acidovorax sp. JS42] gi|120608478|gb|ABM44218.1| SMC domain protein [Acidovorax sp. JS42] Length = 944 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVSLPLDGSIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|312793797|ref|YP_004026720.1| SMC domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180937|gb|ADQ41107.1| SMC domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 637 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +++ E++ I+F+ I+ G+N GKS++ +AI+ + Sbjct: 1 MYLNYLMVKNYKSLKELE-IKFSKGKNIIIGRNNAGKSNIIKAIDLVLGE 49 >gi|261213261|ref|ZP_05927543.1| DNA recombination and repair protein RecF [Vibrio sp. RC341] gi|262402080|ref|ZP_06078644.1| DNA recombination and repair protein RecF [Vibrio sp. RC586] gi|260837535|gb|EEX64238.1| DNA recombination and repair protein RecF [Vibrio sp. RC341] gi|262351726|gb|EEZ00858.1| DNA recombination and repair protein RecF [Vibrio sp. RC586] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|258622960|ref|ZP_05717975.1| recF protein [Vibrio mimicus VM573] gi|258626084|ref|ZP_05720935.1| recF protein [Vibrio mimicus VM603] gi|262166786|ref|ZP_06034523.1| DNA recombination and repair protein RecF [Vibrio mimicus VM223] gi|262172780|ref|ZP_06040458.1| DNA recombination and repair protein RecF [Vibrio mimicus MB-451] gi|258581610|gb|EEW06508.1| recF protein [Vibrio mimicus VM603] gi|258584743|gb|EEW09477.1| recF protein [Vibrio mimicus VM573] gi|261893856|gb|EEY39842.1| DNA recombination and repair protein RecF [Vibrio mimicus MB-451] gi|262026502|gb|EEY45170.1| DNA recombination and repair protein RecF [Vibrio mimicus VM223] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|229524915|ref|ZP_04414320.1| DNA recombination and repair protein RecF [Vibrio cholerae bv. albensis VL426] gi|229338496|gb|EEO03513.1| DNA recombination and repair protein RecF [Vibrio cholerae bv. albensis VL426] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|254291125|ref|ZP_04961922.1| recF protein [Vibrio cholerae AM-19226] gi|150422970|gb|EDN14920.1| recF protein [Vibrio cholerae AM-19226] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|153831484|ref|ZP_01984151.1| recF protein [Vibrio cholerae 623-39] gi|148873035|gb|EDL71170.1| recF protein [Vibrio cholerae 623-39] Length = 185 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|153212933|ref|ZP_01948527.1| recF protein [Vibrio cholerae 1587] gi|124116159|gb|EAY34979.1| recF protein [Vibrio cholerae 1587] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|121587253|ref|ZP_01677026.1| recF protein [Vibrio cholerae 2740-80] gi|153802501|ref|ZP_01957087.1| recF protein [Vibrio cholerae MZO-3] gi|229520186|ref|ZP_04409613.1| DNA recombination and repair protein RecF [Vibrio cholerae TM 11079-80] gi|262189753|ref|ZP_06048108.1| DNA recombination and repair protein RecF [Vibrio cholerae CT 5369-93] gi|297581952|ref|ZP_06943872.1| recombination protein recF [Vibrio cholerae RC385] gi|121548499|gb|EAX58555.1| recF protein [Vibrio cholerae 2740-80] gi|124121971|gb|EAY40714.1| recF protein [Vibrio cholerae MZO-3] gi|229342780|gb|EEO07771.1| DNA recombination and repair protein RecF [Vibrio cholerae TM 11079-80] gi|262034367|gb|EEY52752.1| DNA recombination and repair protein RecF [Vibrio cholerae CT 5369-93] gi|297533819|gb|EFH72660.1| recombination protein recF [Vibrio cholerae RC385] Length = 363 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLVIQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|328545241|ref|YP_004305350.1| hypothetical protein SL003B_3624 [polymorphum gilvum SL003B-26A1] gi|326414983|gb|ADZ72046.1| hypothetical protein SL003B_3624 [Polymorphum gilvum SL003B-26A1] Length = 443 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + L + +++FR F + +EF LT++ +NG GK+++ +A Sbjct: 2 IALSLDKLSLTNFRCFAHCE-VEFHPRLTVLVAENGSGKTAVLDA 45 >gi|300715707|ref|YP_003740510.1| RecF protein [Erwinia billingiae Eb661] gi|299061543|emb|CAX58657.1| Putative RecF protein [Erwinia billingiae Eb661] Length = 362 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + ++ FR + +E L +++G NG GKS+L +A+ L + R Sbjct: 1 MTIKQLSLAGFRSIRD---VELPLSQLNVISGPNGCGKSNLYKAVRLLHEAASGR 52 >gi|260427708|ref|ZP_05781687.1| molybdate ABC transporter, ATP-binding protein [Citreicella sp. SE45] gi|260422200|gb|EEX15451.1| molybdate ABC transporter, ATP-binding protein [Citreicella sp. SE45] Length = 366 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 30 LDIEISH-FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +E+SH F F E +T++ G++G GK+++ A+ L T R G+ + Sbjct: 3 LKVELSHRFGTFALDASFEAPQGVTVLFGRSGSGKTTIVNAVAGLLRPDTGRIAVGERVL 62 Query: 89 KRSIK 93 S + Sbjct: 63 FDSTR 67 >gi|295657203|ref|XP_002789173.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226284517|gb|EEH40083.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1136 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ AI G G S+K Sbjct: 119 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTAITLCLGGKASVTNRGQSLK 177 >gi|217970372|ref|YP_002355606.1| SMC domain protein [Thauera sp. MZ1T] gi|217507699|gb|ACK54710.1| SMC domain protein [Thauera sp. MZ1T] Length = 930 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F + +E+ H+ F + + + G NG GK++L +A+ LF + +R Sbjct: 1 MFHIKTLELVHW-DFWRRFTLPLDAQIITIVGPNGSGKTTLLDALRTLFALRCSGKRDFR 59 Query: 85 DSIKK 89 +++ Sbjct: 60 RYVRR 64 >gi|190572118|ref|YP_001969963.1| hypothetical protein Smlt0029 [Stenotrophomonas maltophilia K279a] gi|190010040|emb|CAQ43646.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 575 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ + I +FR + A + + G GKS++ +AI+ +R + Sbjct: 3 RIRHLAIRNFRSIKALDWSP-APGINCLIGPGDSGKSTILDAIDLCLG--ARRSISFGDM 59 Query: 88 KKRSIKTPMPMCMAV 102 + P+ +AV Sbjct: 60 DFFDLDVSEPIRIAV 74 >gi|68637931|emb|CAI36136.1| hypothetical protein [Pseudomonas syringae pv. phaseolicola] Length = 710 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + +++ ++R F E + F + + G+NG GK++L A Sbjct: 1 MHISRLQLVNYRNF-ECANVVFNKGVNTIIGENGSGKTNLFRA 42 >gi|117924875|ref|YP_865492.1| hypothetical protein Mmc1_1577 [Magnetococcus sp. MC-1] gi|117608631|gb|ABK44086.1| conserved hypothetical protein [Magnetococcus sp. MC-1] Length = 377 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-------YGYTQRR 81 L + + F+ ++ + E +L ++ G NG GKS+ + L + R Sbjct: 5 LKTLTVKGFKSIKDLNEFELG-NLNVIIGANGAGKSNFVQIFRMLMAMTQKNFSKFILER 63 Query: 82 KHGDSIKKRSIKTPMPMCM 100 DS K + M Sbjct: 64 GGADSFLFNGPKVTPKINM 82 >gi|308185970|ref|YP_003930101.1| DNA replication and repair protein recF [Pantoea vagans C9-1] gi|308056480|gb|ADO08652.1| DNA replication and repair protein recF [Pantoea vagans C9-1] Length = 368 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I+I FR + L +V+G NG GKS+L +A+ L + R Sbjct: 1 MAIEQIQIRGFRSIRNLTLS--LQQLNVVSGPNGCGKSNLYKAVRLLHEAASGR 52 >gi|304395564|ref|ZP_07377447.1| SMC domain protein [Pantoea sp. aB] gi|304356858|gb|EFM21222.1| SMC domain protein [Pantoea sp. aB] Length = 368 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I+I FR + L +V+G NG GKS+L +A+ L + R Sbjct: 1 MAIEQIQIRGFRSIRNLTLS--LQQLNVVSGPNGCGKSNLYKAVRLLHEAASGR 52 >gi|146421679|ref|XP_001486784.1| hypothetical protein PGUG_00161 [Meyerozyma guilliermondii ATCC 6260] Length = 1082 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F E ++EF L + G+NG GKS++ I G S+K Sbjct: 63 IEKLVLRNFMCH-EFFELEFGPQLNFIIGRNGSGKSAILTGISVGLGAKAADTNRGTSMK 121 Query: 89 KR 90 K Sbjct: 122 KL 123 >gi|145299212|ref|YP_001142053.1| ATP-dependent endonuclease [Aeromonas salmonicida subsp. salmonicida A449] gi|142851984|gb|ABO90305.1| predicted ATP-dependent endonuclease of the OLD family [Aeromonas salmonicida subsp. salmonicida A449] Length = 545 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L IE+ FRG I ++ D+ T++ G+N +GKSSL A+ W G Sbjct: 1 MFLERIEVKGFRG---INRLSLGLDNTTVLIGENAWGKSSLLRAL-WCLLGQDAE 51 >gi|117619202|ref|YP_856912.1| homology with RecF protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560609|gb|ABK37557.1| homology with RecF protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 545 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L IE+ FRG I ++ D+ T++ G+N +GKSSL A+ W G Sbjct: 1 MFLERIEVKGFRG---INRLSLGLDNTTVLIGENAWGKSSLLRAL-WCLLGQDAE 51 >gi|307295030|ref|ZP_07574872.1| DNA replication and repair protein RecF [Sphingobium chlorophenolicum L-1] gi|306879504|gb|EFN10722.1| DNA replication and repair protein RecF [Sphingobium chlorophenolicum L-1] Length = 354 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +S FR + + ++ G NG GK+++ EA+ L G R G +++ Sbjct: 2 IGRLTLSDFRNHADALIVP-DHSFIVLTGDNGAGKTNILEAVSMLAPG---RGLRGAALR 57 Query: 89 KRSIK 93 + + Sbjct: 58 DMARQ 62 >gi|295697470|ref|YP_003590708.1| hypothetical protein Btus_2929 [Bacillus tusciae DSM 2912] gi|295413072|gb|ADG07564.1| conserved hypothetical protein [Bacillus tusciae DSM 2912] Length = 373 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++++FR F+++ KIE + ++ G+N GKSSL EA+ Y+ R I+ Sbjct: 2 LKSFQVTNFRIFSDL-KIETLGTVNLIIGKNNSGKSSLLEALRL----YSFRGSPAVIIE 56 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 + + MP +Y+++ Sbjct: 57 MLNSRDEMPKQRVQEFSEYEVR 78 >gi|213423454|ref|ZP_03356436.1| recombination and repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 255 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + IS+F E++ I+F +T++ G+ G GKS +A+ G + Sbjct: 1 MAQLTISNFAIVRELE-IDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEA 51 >gi|145301282|ref|YP_001144122.1| SMC (structural maintenance of chromosomes) family protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142856059|gb|ABO92374.1| SMC (structural maintenance of chromosomes) family protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 669 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQ-----KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I S++R F + E L I+ G+N GK+ + +AI + + Sbjct: 1 MYLRRIRASNYRAFGDGSVAPALDWELNPGLNILVGENDAGKTGIIDAIRQVLLTTSYES 60 Query: 82 KH 83 Sbjct: 61 IR 62 >gi|307314254|ref|ZP_07593862.1| SMC domain-containing protein [Escherichia coli W] gi|306906077|gb|EFN36596.1| SMC domain-containing protein [Escherichia coli W] gi|315062949|gb|ADT77276.1| hypothetical protein ECW_m3938 [Escherichia coli W] gi|323376458|gb|ADX48726.1| SMC domain-containing protein [Escherichia coli KO11] Length = 566 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ +++ FR F + I F + T++ G N GKS++ ++ L Sbjct: 1 MEISSLKLKGFRNFKD-AYINFNSN-TLIIGANDVGKSNMLHSLRMLLDKSI 50 >gi|300814773|ref|ZP_07095021.1| putative DNA replication and repair protein RecF [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511160|gb|EFK38412.1| putative DNA replication and repair protein RecF [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 358 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + +FR + + K+ + I+ G+N GK++L EAI Y+ + + Sbjct: 1 MNLSFIGLYNFRNYKSL-KLNTGPKINIIYGKNASGKTNLLEAIYMTCKAYSFKNPRDND 59 Query: 87 IKKRS 91 + S Sbjct: 60 LINFS 64 >gi|222033743|emb|CAP76484.1| hypothetical protein LF82_317 [Escherichia coli LF82] gi|312946597|gb|ADR27424.1| ATP-dependent OLD family endonuclease [Escherichia coli O83:H1 str. NRG 857C] gi|324008909|gb|EGB78128.1| hypothetical protein HMPREF9532_01331 [Escherichia coli MS 57-2] Length = 690 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHG 84 + +EI +FR + + + + T++ G+N GK+SLSE I +L G + Sbjct: 1 MHIHQVEIKNFRLLADAELV-LEEQTTVIVGRNNSGKTSLSEIIRRFLADGSATFQLED 58 >gi|190345844|gb|EDK37800.2| hypothetical protein PGUG_01898 [Meyerozyma guilliermondii ATCC 6260] Length = 1058 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRKHGDS 86 ++ + +++F ++ + + + L ++ G NG GKS+L AI G + RRK S Sbjct: 15 IVSVRVTNFTTYS-NAEFQLSPTLNMIIGPNGTGKSTLVAAICLGLGGKIELIRRKTLKS 73 Query: 87 IKKRS 91 + K Sbjct: 74 MIKTG 78 >gi|190572095|ref|YP_001969940.1| recombination protein F [Stenotrophomonas maltophilia K279a] gi|226737840|sp|B2FT82|RECF_STRMK RecName: Full=DNA replication and repair protein recF gi|190010017|emb|CAQ43622.1| putative DNA replication and repair protein RecF [Stenotrophomonas maltophilia K279a] Length = 364 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + R F+ + L ++ G NG GK+S+ EA+ + YG + R + D Sbjct: 1 MLIRRLALHQLRRFSA-VDLSPQPGLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LVRQGQE 66 >gi|58038494|ref|YP_190458.1| recombination protein F [Gluconobacter oxydans 621H] gi|58000908|gb|AAW59802.1| DNA replication and repair protein RecF [Gluconobacter oxydans 621H] Length = 367 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + ++ FR +T + ++ G+NG GK++L EA+ L G R G + Sbjct: 1 MKLTRLALTDFRNYTHTVWTP-EASILVLTGENGSGKTNLLEAVSLLAPG---RGLRGAA 56 Query: 87 I 87 + Sbjct: 57 L 57 >gi|307319240|ref|ZP_07598669.1| DNA replication and repair protein RecF [Sinorhizobium meliloti AK83] gi|306895076|gb|EFN25833.1| DNA replication and repair protein RecF [Sinorhizobium meliloti AK83] Length = 374 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +++S FR + + ++ ++ G+NG GK++L E + +L G RR Sbjct: 5 VFLTRLKLSDFRNYATLA-LDLDQRHVVLTGENGAGKTNLMEGVSFLSPGRGLRR 58 >gi|163746939|ref|ZP_02154296.1| hypothetical protein OIHEL45_16089 [Oceanibulbus indolifex HEL-45] gi|161380053|gb|EDQ04465.1| hypothetical protein OIHEL45_16089 [Oceanibulbus indolifex HEL-45] Length = 866 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKI-EFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I +++ R FT+ ++ D + +++ N +GKS+L +AI+ LF+ Sbjct: 1 MKIRAITLNNVRRFTDPAQVVGIGDGINVLSEPNEHGKSTLFDAIQALFF 50 >gi|152996589|ref|YP_001341424.1| SMC domain-containing protein [Marinomonas sp. MWYL1] gi|150837513|gb|ABR71489.1| SMC domain protein [Marinomonas sp. MWYL1] Length = 263 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 10/54 (18%) Query: 27 FKLLDIEISH--FRG--------FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I + +R + + +++EF +++T + G+NG GKS+L EA+ Sbjct: 1 MYLKSVYIKNDEYRNGFPFHLEVYRKFKELEFNNNVTFLVGENGSGKSTLLEAL 54 >gi|7019618|gb|AAB70169.2| RecF [Sinorhizobium meliloti] Length = 176 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +++S FR + + ++ ++ G+NG GK++L E + +L G RR Sbjct: 5 VFLTRLKLSDFRNYATLA-LDLDQRHVVLTGENGAGKTNLMEGVSFLSPGRGLRR 58 >gi|47228744|emb|CAG07476.1| unnamed protein product [Tetraodon nigroviridis] Length = 1034 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I + +F + + ++ +L ++ G NG GKSS+ AI G T GD + Sbjct: 5 ILRITMKNFLTY-DYTEVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGDKV 62 >gi|15963941|ref|NP_384294.1| recombination protein F [Sinorhizobium meliloti 1021] gi|307306353|ref|ZP_07586097.1| DNA replication and repair protein RecF [Sinorhizobium meliloti BL225C] gi|8475781|sp|P56903|RECF_RHIME RecName: Full=DNA replication and repair protein recF gi|15073116|emb|CAC41575.1| DNA repair protein [Sinorhizobium meliloti 1021] gi|306902195|gb|EFN32792.1| DNA replication and repair protein RecF [Sinorhizobium meliloti BL225C] Length = 374 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +++S FR + + ++ ++ G+NG GK++L E + +L G RR Sbjct: 5 VFLTRLKLSDFRNYATLA-LDLDQRHVVLTGENGAGKTNLMEGVSFLSPGRGLRR 58 >gi|331001416|ref|ZP_08325036.1| RecF/RecN/SMC protein [Parasutterella excrementihominis YIT 11859] gi|329568298|gb|EGG50109.1| RecF/RecN/SMC protein [Parasutterella excrementihominis YIT 11859] Length = 549 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I I +FRG ++ ++ L I+ G+ GKS++ AI + Sbjct: 3 KIESITIKNFRGIKSLETTSLSERLIILIGRGDSGKSTILTAINYALSPAWNLSFSDLDF 62 Query: 88 KKRSIKTPMPMCMAV 102 + I P+ + ++V Sbjct: 63 YNQDICNPIEINVSV 77 >gi|325969852|ref|YP_004246043.1| DNA replication and repair protein RecF [Spirochaeta sp. Buddy] gi|324025090|gb|ADY11849.1| DNA replication and repair protein RecF [Spirochaeta sp. Buddy] Length = 360 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +++ + FR Q+I + + G NG GK++L EA+ L YG + R Sbjct: 1 MRFIELWTNQFRNLVS-QRIPVDNRQVFLIGPNGQGKTNLLEALYALCYGSSFR 53 >gi|317050202|ref|YP_004111318.1| DNA replication and repair protein RecF [Desulfurispirillum indicum S5] gi|316945286|gb|ADU64762.1| DNA replication and repair protein RecF [Desulfurispirillum indicum S5] Length = 343 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + + +FR + + F + + G NG GK+S E I G + R Sbjct: 2 LTETRVRNFRCIADAV-LSFTPGINALCGVNGSGKTSFLEVISICANGKSFR 52 >gi|257463647|ref|ZP_05628038.1| ABC transporter related protein [Fusobacterium sp. D12] gi|317061198|ref|ZP_07925683.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313686874|gb|EFS23709.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 258 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 35 SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +EF ++ G NG GKS+L ++I + YT +GD Sbjct: 13 KGGKNIFHNFSVEFQKGFNVILGPNGAGKSTLIKSI-FGLLDYTGDILYGD 62 >gi|164687823|ref|ZP_02211851.1| hypothetical protein CLOBAR_01467 [Clostridium bartlettii DSM 16795] gi|164603098|gb|EDQ96563.1| hypothetical protein CLOBAR_01467 [Clostridium bartlettii DSM 16795] Length = 619 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAI 70 K+ I IS+++ E + + D++T + G+N GKS++ EA+ Sbjct: 1 MKIKSIIISNYKSLGEERNVLLLEDNITALIGKNDSGKSNILEAL 45 >gi|71907548|ref|YP_285135.1| SMC protein, N-terminal [Dechloromonas aromatica RCB] gi|71847169|gb|AAZ46665.1| SMC protein, N-terminal [Dechloromonas aromatica RCB] Length = 1155 Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + I+F + L + G G GKS+L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWTIDFTKAPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR 60 >gi|302851366|ref|XP_002957207.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f. nagariensis] gi|300257457|gb|EFJ41705.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f. nagariensis] Length = 178 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 34 ISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I R F+ + IEF LTIV G NG GK+++ E + G Sbjct: 1 IKGIRSFSPDNEYIIEFYKPLTIVVGSNGAGKTTIIECLRNATTG 45 >gi|283768209|ref|ZP_06341122.1| RecF/RecN/SMC N-terminal domain protein [Bulleidia extructa W1219] gi|283105086|gb|EFC06457.1| RecF/RecN/SMC N-terminal domain protein [Bulleidia extructa W1219] Length = 902 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRR 81 + L + + F + + ++F + ++ G G GK+S+ + I + YG + + Sbjct: 1 MRPLQLTLQAFSSYQKKTVLDFRLLGQTGVFVIWGDTGSGKTSIFDGISYALYGEQSGQE 60 Query: 82 KHG--DSIKKRSIKTPMP 97 H D ++ + + Sbjct: 61 VHKPLDFRNRQEQDSKVE 78 >gi|67459481|ref|YP_247105.1| DNA repair protein RecN [Rickettsia felis URRWXCal2] gi|75536112|sp|Q4UKJ1|RECN_RICFE RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|67005014|gb|AAY61940.1| DNA repair protein RecN [Rickettsia felis URRWXCal2] Length = 546 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 3 HSLLVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|85710935|ref|ZP_01041996.1| ABC transporter ATP-binding protein [Idiomarina baltica OS145] gi|85695339|gb|EAQ33276.1| ABC transporter ATP-binding protein [Idiomarina baltica OS145] Length = 708 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 27 FKLLDIEISHFR---GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL+ +IS+FR + + LT++ N GK++ A+ W FYG + Sbjct: 1 MKLISAKISNFRLLKSLSLDFSTDHEKKLTVIRAANETGKTTCLNALLWCFYGSKALPQR 60 Query: 84 GDSIKKRSIK 93 G S + Sbjct: 61 GHYSLFPSDE 70 >gi|85093572|ref|XP_959722.1| hypothetical protein NCU02402 [Neurospora crassa OR74A] gi|28921172|gb|EAA30486.1| predicted protein [Neurospora crassa OR74A] Length = 1192 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I +F T E L + G+NG GKS++ AI G G S+K Sbjct: 124 LESITCINFMCHT-RLHCELGPLLNFIVGENGSGKSAILTAITLCLGGKASSTNRGGSLK 182 >gi|297561265|ref|YP_003680239.1| SMC domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845713|gb|ADH67733.1| SMC domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 397 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 F L + + H+R + L + G NG GKS+ +A+ + Sbjct: 6 FSLTRVHLKHYRSIA-KADVRLG-QLLFLVGPNGSGKSNFLDALRLV 50 >gi|158521391|ref|YP_001529261.1| hypothetical protein Dole_1380 [Desulfococcus oleovorans Hxd3] gi|158510217|gb|ABW67184.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3] Length = 234 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 F + ++I F +T G+NG GKS+L EA+ + R G + +T + Sbjct: 28 FRQTRQIRFESPVTFFVGENGTGKSTLLEALALAGGIHIWRNCEGARYQVNPYETQL 84 >gi|120435150|ref|YP_860836.1| DNA replication and repair protein RecF [Gramella forsetii KT0803] gi|226737803|sp|A0LZH4|RECF_GRAFK RecName: Full=DNA replication and repair protein recF gi|117577300|emb|CAL65769.1| DNA replication and repair protein RecF [Gramella forsetii KT0803] Length = 359 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L ++ + +++ + + +F + + + G NG GK+++ ++I L +G + Sbjct: 1 MHLKNLSLLNYKNL-KTAEFDFDEKINCLVGNNGVGKTNVLDSIYLLSFGKS 51 >gi|86738727|ref|YP_479127.1| recombination protein F [Frankia sp. CcI3] gi|86565589|gb|ABD09398.1| DNA replication and repair protein RecF [Frankia sp. CcI3] Length = 399 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + + FR + + + + G NG GK+++ EAI ++ + R Sbjct: 1 MHLTHLSLVDFRSYPALD-LTLGPGVATFVGGNGQGKTNVIEAISYVATLASHR 53 >gi|313902579|ref|ZP_07835979.1| SMC domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467145|gb|EFR62659.1| SMC domain protein [Thermaerobacter subterraneus DSM 13965] Length = 404 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL---FYGYTQRRKHG- 84 + + + +++ + H+T++ G NG GKS+ +A+ ++ + Sbjct: 8 IQSVRVRNYKSIAACEV--HLSHVTVLVGPNGSGKSNFLDALRFVADALRTTLEHAIRDR 65 Query: 85 ---DSIKKRSIKTP 95 + +++RS P Sbjct: 66 GGINEVRRRSHGHP 79 >gi|300173622|ref|YP_003772788.1| DNA repair protein RecN [Leuconostoc gasicomitatum LMG 18811] gi|299888001|emb|CBL91969.1| DNA repair protein RecN [Leuconostoc gasicomitatum LMG 18811] Length = 558 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E ++F ++++ G+ G GKS + +A+ L G R + + I+ Sbjct: 2 LENLIIENF-AIIEKVALQFDSGMSVLTGETGAGKSIIIDALLMLTGG----RANSEMIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 S K + +VP+ K Sbjct: 57 HGSKKAILQAVFSVPKNK 74 >gi|260431696|ref|ZP_05785667.1| recombination protein F [Silicibacter lacuscaerulensis ITI-1157] gi|260415524|gb|EEX08783.1| recombination protein F [Silicibacter lacuscaerulensis ITI-1157] Length = 366 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L ++ +SHFR ++ ++ + G NG GK+++ EA+ G RR Sbjct: 1 MALALTELTVSHFRSH-KLARMALDGRPVALYGPNGAGKTNILEAVSLFSPGRGMRRASA 59 Query: 85 DSIKKR 90 + +R Sbjct: 60 AEMTRR 65 >gi|261205742|ref|XP_002627608.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081] gi|239592667|gb|EEQ75248.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081] Length = 1300 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 7 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 47 >gi|308234057|ref|ZP_07664794.1| DNA replication and repair protein RecF [Atopobium vaginae DSM 15829] gi|328943454|ref|ZP_08240919.1| recombination protein F [Atopobium vaginae DSM 15829] gi|327491423|gb|EGF23197.1| recombination protein F [Atopobium vaginae DSM 15829] Length = 382 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 F L ++ +++R F + +I D T+++G N GK++ EA++ + G + R+ Sbjct: 3 FVLHELTCTNWRNF-QHLRISLGDKTTVLHGSNAVGKTNTIEAVQMITTGTSFRK 56 >gi|153955125|ref|YP_001395890.1| ABC transporter ATP-binding protein [Clostridium kluyveri DSM 555] gi|219855561|ref|YP_002472683.1| hypothetical protein CKR_2218 [Clostridium kluyveri NBRC 12016] gi|146347983|gb|EDK34519.1| Predicted ABC transporter, ATP-binding protein [Clostridium kluyveri DSM 555] gi|219569285|dbj|BAH07269.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 266 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ +I H F+ + F +++T + G NG GKS+L + I ++ + G+ Sbjct: 3 LKIQNINYKHSSKFSLNNISLTFHNNVTAIIGPNGSGKSTLVKCILNIYKCDGEMYYQGE 62 Query: 86 SIKKRSIK 93 SIKK+ + Sbjct: 63 SIKKQKKE 70 >gi|145222844|ref|YP_001133522.1| hypothetical protein Mflv_2256 [Mycobacterium gilvum PYR-GCK] gi|315443311|ref|YP_004076190.1| hypothetical protein Mspyr1_16890 [Mycobacterium sp. Spyr1] gi|145215330|gb|ABP44734.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261614|gb|ADT98355.1| hypothetical protein Mspyr1_16890 [Mycobacterium sp. Spyr1] Length = 883 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG T IEF D + +V+G N GKSS+ EA++ L ++ R + Sbjct: 1 MKLHRLVLTNYRGITHRD-IEFPDRGVVVVSGANEVGKSSMLEALDLLL--ESKDRSNKK 57 Query: 86 SIKK 89 IK+ Sbjct: 58 EIKQ 61 >gi|66819565|ref|XP_643442.1| hypothetical protein DDB_G0275697 [Dictyostelium discoideum AX4] gi|19717677|gb|AAL96260.1|AF482962_1 ABC transporter AbcH.3 [Dictyostelium discoideum] gi|60471643|gb|EAL69599.1| hypothetical protein DDB_G0275697 [Dictyostelium discoideum AX4] Length = 1118 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 18/98 (18%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---------DHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K+ I I F G ++ + + + ++ G+ G GKS++ EA+ W YG Sbjct: 452 VKIQKITIKDFCGLGGELELNLSMDVDQQEMINRMIMIRGEMGSGKSTIFEALVWCLYGN 511 Query: 78 --------TQRRKHGDSIK-KRSIKTPMPMCMAVPRCK 106 + GD + +S + + + + + CK Sbjct: 512 TSPKKQSTSSSSIKGDEVINDQSKQASVKVELLIDDCK 549 >gi|294674421|ref|YP_003575037.1| hypothetical protein PRU_1745 [Prevotella ruminicola 23] gi|294473220|gb|ADE82609.1| hypothetical protein PRU_1745 [Prevotella ruminicola 23] Length = 1048 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFTEIQ----KIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 KL I+I FR F +++ FAD + V NG+GK+SL +AIE+ Sbjct: 1 MKLKGIKIKAFRLFDDVELSFVNQRFADKGCANFVSVYAPNGFGKTSLFDAIEFGMTSNI 60 Query: 79 QR 80 +R Sbjct: 61 RR 62 >gi|257457677|ref|ZP_05622844.1| SMC domain protein [Treponema vincentii ATCC 35580] gi|257445063|gb|EEV20139.1| SMC domain protein [Treponema vincentii ATCC 35580] Length = 1092 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYG 76 +K + ++ + + FT +++F L ++ GQ G GK++L +AI + FYG Sbjct: 16 KKPRMRPKELILHNIGPFTGEHRVDFDTLGSLFLIYGQTGAGKTTLFDAISYAFYG 71 >gi|190344395|gb|EDK36063.2| hypothetical protein PGUG_00161 [Meyerozyma guilliermondii ATCC 6260] Length = 1082 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F E ++EF L + G+NG GKS++ I G S+K Sbjct: 63 IEKLVLRNFMCH-EFFELEFGPQLNFIIGRNGSGKSAILTGISVGLGAKAADTNRGTSMK 121 Query: 89 KR 90 K Sbjct: 122 KL 123 >gi|157803368|ref|YP_001491917.1| DNA repair protein RecN [Rickettsia canadensis str. McKiel] gi|157784631|gb|ABV73132.1| DNA repair protein RecN [Rickettsia canadensis str. McKiel] Length = 546 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + + +F + +IEF L ++ G+ G GKS L +AI + Sbjct: 2 LQSLLVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLG 47 >gi|118398608|ref|XP_001031632.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila] gi|89285963|gb|EAR83969.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila SB210] Length = 1303 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 28 KLLDIEISHFRGFTEIQK-----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L + I R + + I F LT++ G NG GKS++ E ++ + G Sbjct: 3 YLKKLGIYGIRSYGDQNSEKYEEIAFFKPLTLILGNNGAGKSTIIECLKLITTGS 57 >gi|332882412|ref|ZP_08450040.1| DNA replication and repair protein RecF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679796|gb|EGJ52765.1| DNA replication and repair protein RecF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 365 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +++ + + + F+ + G NG GK++L +A+ +L + + Sbjct: 3 LKKISVLNYKNIAQAE-LAFSPKMNCFIGHNGEGKTNLLDAVYFLSFCKSATNSVDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHGED 66 >gi|239614397|gb|EEQ91384.1| DNA repair protein Rad18 [Ajellomyces dermatitidis ER-3] gi|327351409|gb|EGE80266.1| DNA repair protein Rad18 [Ajellomyces dermatitidis ATCC 18188] Length = 1172 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 132 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 190 >gi|261195817|ref|XP_002624312.1| DNA repair protein Rad18 [Ajellomyces dermatitidis SLH14081] gi|239587445|gb|EEQ70088.1| DNA repair protein Rad18 [Ajellomyces dermatitidis SLH14081] Length = 1172 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 132 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 190 >gi|228982472|ref|ZP_04142731.1| metallophosphoesterase [Bacillus thuringiensis Bt407] gi|228776655|gb|EEM24963.1| metallophosphoesterase [Bacillus thuringiensis Bt407] Length = 802 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 14/74 (18%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M L K+N A SYY K++ + +F+ E ++F+ L + G++G Sbjct: 341 MKSLMKENVVA------DSYYITKMV-------LENFQSH-ENTTLDFSKGLNLFTGESG 386 Query: 61 YGKSSLSEAIEWLF 74 GKS++ A ++F Sbjct: 387 QGKSAVIRAFAFIF 400 >gi|126656886|ref|ZP_01728064.1| hypothetical protein CY0110_01869 [Cyanothece sp. CCY0110] gi|126621724|gb|EAZ92433.1| hypothetical protein CY0110_01869 [Cyanothece sp. CCY0110] Length = 387 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +IEI +FR F E KIE + + ++ G+N GK++L EAI Sbjct: 2 IKNIEIENFRCF-EHTKIEGFERVNLIGGKNNSGKTALLEAI 42 >gi|317133766|ref|YP_004089677.1| SMC domain protein [Ruminococcus albus 7] gi|315450228|gb|ADU23791.1| SMC domain protein [Ruminococcus albus 7] Length = 597 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +I I +F G T ++ I + ++ G NG+GK++ +A+++ G R Sbjct: 1 MNFKNICIENFGGITHLETI--PKRVNVIIGPNGHGKTTFLKAVKYGLVGSQTRS 53 >gi|289606841|emb|CBI60988.1| unnamed protein product [Sordaria macrospora] Length = 162 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 32 IEISHFRGFTEIQK---IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I +FR F + + LT + G+N GK+++ +A+ + Q D + Sbjct: 14 LSIENFRLFGSADRAFHLPLNPGLTALIGENDAGKTAVIDAVRLVLGTRDQDMLRVDPVD 73 Query: 89 KRSI 92 Sbjct: 74 FHQS 77 >gi|260944566|ref|XP_002616581.1| hypothetical protein CLUG_03822 [Clavispora lusitaniae ATCC 42720] gi|238850230|gb|EEQ39694.1| hypothetical protein CLUG_03822 [Clavispora lusitaniae ATCC 42720] Length = 425 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 + + I +F ++ + + + L ++ G NG GKS+ A+ G +RK+ DS Sbjct: 28 ITLLRIWNFTTYSYGE-FKLSPTLNMIIGPNGTGKSTFVAAVCLGLGGRVDLIKRKNMDS 86 Query: 87 IKKRSIK 93 + K K Sbjct: 87 MIKSGEK 93 >gi|254410361|ref|ZP_05024140.1| DNA repair protein RecN [Microcoleus chthonoplastes PCC 7420] gi|196182567|gb|EDX77552.1| DNA repair protein RecN [Microcoleus chthonoplastes PCC 7420] Length = 589 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + ++EFA L ++ G+ G GKS + +AI+ G R Sbjct: 2 LLSLRIQNF-ALIDQLELEFAAGLNVLTGETGAGKSIILDAIDVALGGKVTHRL 54 >gi|71280559|ref|YP_266785.1| DNA replication and repair protein RecF [Colwellia psychrerythraea 34H] gi|123634297|sp|Q48AS5|RECF_COLP3 RecName: Full=DNA replication and repair protein recF gi|71146299|gb|AAZ26772.1| DNA replication and repair protein RecF [Colwellia psychrerythraea 34H] Length = 377 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +FR + I+ L G NG GKSSL EA+ +L +G + R Sbjct: 1 MSVARLTTYNFRNLSS-VAIDLHPKLNFFIGNNGSGKSSLLEALFFLGHGKSFR 53 >gi|58337600|ref|YP_194185.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227904240|ref|ZP_04022045.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796] gi|58254917|gb|AAV43154.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227867888|gb|EEJ75309.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796] Length = 560 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L G Q+ Sbjct: 2 LVELDIQNF-AIIKSLKVRFQERMTVIIGETGAGKSIIIDAVSLLMGGRGQKEM 54 >gi|313671973|ref|YP_004050084.1| smc domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312938729|gb|ADR17921.1| SMC domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 335 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L DI++ +FR F D + G+NG GK+S+ E+I +F G + + Sbjct: 1 MYLKDIKLRNFRNHI-NSIFSF-DIKNYITGKNGSGKTSILESISLIFTGKSFK 52 >gi|254518739|ref|ZP_05130795.1| DNA repair protein RecN [Clostridium sp. 7_2_43FAA] gi|226912488|gb|EEH97689.1| DNA repair protein RecN [Clostridium sp. 7_2_43FAA] Length = 566 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +EF I++G+ G GKS L + I+++ G + Sbjct: 2 LLQLNIKNF-ALIQELSVEFGKGFNILSGETGAGKSILIDTIDYVLGGKFSKDL 54 >gi|153854766|ref|ZP_01996000.1| hypothetical protein DORLON_01998 [Dorea longicatena DSM 13814] gi|149752673|gb|EDM62604.1| hypothetical protein DORLON_01998 [Dorea longicatena DSM 13814] Length = 522 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ ++ + +F F + Q I+ + + +++G+N GKS++ I + +G + R Sbjct: 1 MQINELLLKNFGKFHDRQ-IDLDEGINLIHGENESGKSTIHTFIRGMLFGIERGRGR 56 >gi|134055356|emb|CAK43910.1| unnamed protein product [Aspergillus niger] Length = 1294 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 6 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 46 >gi|304382224|ref|ZP_07364731.1| recombination protein F [Prevotella marshii DSM 16973] gi|304336581|gb|EFM02810.1| recombination protein F [Prevotella marshii DSM 16973] Length = 371 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +F+ E +E + + G NG GK++ +A+ +L + + I Sbjct: 3 LSKISIINFKNIREAV-LELSPKMNCFIGDNGEGKTNFLDAVYYLSFCRSASNPIDSQII 61 >gi|289706334|ref|ZP_06502692.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289556829|gb|EFD50162.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 415 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ + + + + Q ++F L +++G G GKS++ A+ + YG Sbjct: 1 MRIHRMRLEGLGPYAQAQDVDFDRLNAAGLFLLDGPTGAGKSTVLAALCFALYGT 55 >gi|281491354|ref|YP_003353334.1| DNA repair protein RecN [Lactococcus lactis subsp. lactis KF147] gi|281375095|gb|ADA64613.1| DNA repair protein RecN [Lactococcus lactis subsp. lactis KF147] Length = 564 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGANKAEIE 65 >gi|256826463|ref|YP_003150422.1| recF protein [Cryptobacterium curtum DSM 15641] gi|256582606|gb|ACU93740.1| recF protein [Cryptobacterium curtum DSM 15641] Length = 378 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L ++ + +FR E ++ +TI+ G N GK+S+ EAI+ Sbjct: 11 LRLTNLVLRNFRNHQEF-SLKGLQGITILAGPNATGKTSVVEAIQ 54 >gi|242010715|ref|XP_002426105.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus humanus corporis] gi|212510142|gb|EEB13367.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus humanus corporis] Length = 1030 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ IE +F + + KI +L ++ G NG GKSS+ A+ G + D + Sbjct: 11 IVRIETYNFMSY-DNFKIYPRSNLNLIIGPNGTGKSSIVCAVLLCIGGKLKTLGRADHL 68 >gi|156744014|ref|YP_001434143.1| SMC domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235342|gb|ABU60125.1| SMC domain protein [Roseiflexus castenholzii DSM 13941] Length = 1022 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTI--VNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +F + E D ++I + G NG GKS+L +AI W +G + R D Sbjct: 4 RTLTLQNFMCYREGLPPLVLDGISIACLAGDNGAGKSALLDAITWALWG--EARLKSDD 60 >gi|15672842|ref|NP_267016.1| DNA repair protein RecN [Lactococcus lactis subsp. lactis Il1403] gi|12723788|gb|AAK04958.1|AE006320_7 DNA repair protein RecN [Lactococcus lactis subsp. lactis Il1403] gi|326406407|gb|ADZ63478.1| DNA repair protein RecN [Lactococcus lactis subsp. lactis CV56] Length = 555 Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E + F +TI+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LQEISIKNF-AIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGG----RASSDFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGANKAEIE 65 >gi|257899146|ref|ZP_05678799.1| DNA repair protein RecN [Enterococcus faecium Com15] gi|257837058|gb|EEV62132.1| DNA repair protein RecN [Enterococcus faecium Com15] Length = 561 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D Sbjct: 1 MMLQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDY 55 Query: 87 IKKRSIKTPMPMCMAVPR 104 I++ + K + +P+ Sbjct: 56 IRQGAEKCILEGLFELPK 73 >gi|257888477|ref|ZP_05668130.1| DNA repair protein RecN [Enterococcus faecium 1,141,733] gi|257897148|ref|ZP_05676801.1| DNA repair protein RecN [Enterococcus faecium Com12] gi|257824531|gb|EEV51463.1| DNA repair protein RecN [Enterococcus faecium 1,141,733] gi|257833713|gb|EEV60134.1| DNA repair protein RecN [Enterococcus faecium Com12] Length = 561 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D Sbjct: 1 MMLQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDY 55 Query: 87 IKKRSIKTPMPMCMAVPR 104 I++ + K + +P+ Sbjct: 56 IRQGAEKCILEGLFELPK 73 >gi|268679583|ref|YP_003304014.1| hypothetical protein Sdel_0949 [Sulfurospirillum deleyianum DSM 6946] gi|268617614|gb|ACZ11979.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM 6946] Length = 603 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL + I FR F + I F D T + G+N GKSS+ + IE L Sbjct: 1 MKLHSLRIEGFRRFVD-TTIYFDDA-TFLIGENNIGKSSVLKTIELLL 46 >gi|159125506|gb|EDP50623.1| DNA repair protein Rad50 [Aspergillus fumigatus A1163] Length = 1303 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 2 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 42 >gi|327294469|ref|XP_003231930.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892] gi|326465875|gb|EGD91328.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892] Length = 1279 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 11 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 51 >gi|320355310|ref|YP_004196649.1| SMC domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320123812|gb|ADW19358.1| SMC domain protein [Desulfobulbus propionicus DSM 2032] Length = 1220 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + + + I+F A + + G G GKS++ +AI + T R Sbjct: 1 MRIHAVRLRNLNSLAGTWVIDFTAPEYTASGIFAITGPTGAGKSTILDAICLALFARTPR 60 Query: 81 RKH 83 H Sbjct: 61 LGH 63 >gi|126734318|ref|ZP_01750065.1| hypothetical protein RCCS2_09164 [Roseobacter sp. CCS2] gi|126717184|gb|EBA14048.1| hypothetical protein RCCS2_09164 [Roseobacter sp. CCS2] Length = 639 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 RG + F + I+ G+NG GKS++S+ I ++ G Sbjct: 16 RGHAAYDQ-NFHPGVNIIRGENGSGKSTISDFIFFVLGG 53 >gi|165928443|ref|ZP_02224275.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165940321|ref|ZP_02228845.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|166012065|ref|ZP_02232963.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214434|ref|ZP_02240469.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167402352|ref|ZP_02307817.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422772|ref|ZP_02314525.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|2996319|gb|AAC13199.1| ABC transporter [Yersinia pestis KIM 10] gi|165911752|gb|EDR30405.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919539|gb|EDR36872.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165988999|gb|EDR41300.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204382|gb|EDR48862.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958265|gb|EDR55286.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048244|gb|EDR59652.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 627 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%) Query: 59 NGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 NG GKS+L ++ W YG T GD + + Sbjct: 31 NGAGKSTLMNSLMWCLYGETAHGVKGDDVLSTGHE 65 >gi|83956148|ref|ZP_00964601.1| hypothetical protein NAS141_04528 [Sulfitobacter sp. NAS-14.1] gi|83839534|gb|EAP78714.1| hypothetical protein NAS141_04528 [Sulfitobacter sp. NAS-14.1] Length = 624 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 RG + F + I+ G+NG GKS++S+ I ++ G Sbjct: 3 RGHAAYDQ-NFHPGVNIIRGENGSGKSTISDFIFFVLGG 40 >gi|114566133|ref|YP_753287.1| DNA repair and genetic recombination protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337068|gb|ABI67916.1| DNA repair and genetic recombination protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 560 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I +F E ++ F L ++ G+ G GKS + +A+ + R D ++ Sbjct: 2 LQEIYIKNF-VLIEELRLSFEQGLNVLTGETGAGKSIIIDALGLVLGE----RVRNDLLR 56 Query: 89 KRSIK 93 K Sbjct: 57 DSQKK 61 >gi|325971416|ref|YP_004247607.1| hypothetical protein SpiBuddy_1588 [Spirochaeta sp. Buddy] gi|324026654|gb|ADY13413.1| hypothetical protein SpiBuddy_1588 [Spirochaeta sp. Buddy] Length = 1140 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 F T F L +V G NG GK++L ++ L Y Q++ Sbjct: 17 GFPSHTFPDPPPFHSGLNVVYGPNGVGKTTLVRSLRSLLYATEQQK 62 >gi|229620418|gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A [Arabidopsis thaliana] Length = 876 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I + +F + ++ IEF D + + GQNG GKS++ A+ F + + ++ Sbjct: 22 KILRIRLENFMCHSNLE-IEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 80 Query: 88 KK 89 K Sbjct: 81 KD 82 >gi|225682548|gb|EEH20832.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb03] Length = 1292 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +L + + R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 3 LIPVLALCYTSVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 55 >gi|86130660|ref|ZP_01049260.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85819335|gb|EAQ40494.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 598 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L I+I FR + I F D T + G N GKSS+ +AI L G Sbjct: 1 MRLHRIKIQGFRRLKD-VDITFGDA-TFLIGHNNVGKSSVLKAIGILLSGS 49 >gi|319938734|ref|ZP_08013098.1| DNA repair protein RecN [Streptococcus anginosus 1_2_62CV] gi|319811784|gb|EFW08050.1| DNA repair protein RecN [Streptococcus anginosus 1_2_62CV] Length = 552 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + K + A+ + K Sbjct: 57 HGASKAEIEGLFAIEQSK 74 >gi|319949429|ref|ZP_08023490.1| recombination protein F [Dietzia cinnamea P4] gi|319436891|gb|EFV91950.1| recombination protein F [Dietzia cinnamea P4] Length = 410 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + + +++ +T + G+NG+GK+++ EAI L + R Sbjct: 1 MHLRHLRLLDFRSWP-LLELDLEPGVTTLIGRNGHGKTNVLEAIGVLASLRSHRVAGDAP 59 Query: 87 IKKRSIKT 94 + + T Sbjct: 60 MIRTGAGT 67 >gi|317470558|ref|ZP_07929946.1| hypothetical protein HMPREF1011_00293 [Anaerostipes sp. 3_2_56FAA] gi|316902073|gb|EFV23999.1| hypothetical protein HMPREF1011_00293 [Anaerostipes sp. 3_2_56FAA] Length = 1127 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + E + + F++ + G +G GKS++ +A++ + Y T R Sbjct: 14 LSKICLNNWH-YIERKVLSFSEGINFFTGHSGSGKSTVIDALQIVLYANTDGRG 66 >gi|269792141|ref|YP_003317045.1| ABC transporter-like protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099776|gb|ACZ18763.1| ABC transporter related protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 252 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 18/33 (54%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 R + +E + +T + G NG GKSSL A+ Sbjct: 15 RAVVDGVSVEVGEGITGIIGPNGSGKSSLMRAL 47 >gi|167745833|ref|ZP_02417960.1| hypothetical protein ANACAC_00527 [Anaerostipes caccae DSM 14662] gi|167654697|gb|EDR98826.1| hypothetical protein ANACAC_00527 [Anaerostipes caccae DSM 14662] Length = 1127 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + E + + F++ + G +G GKS++ +A++ + Y T R Sbjct: 14 LSKICLNNWH-YIERKVLSFSEGINFFTGHSGSGKSTVIDALQIVLYANTDGRG 66 >gi|223938582|ref|ZP_03630473.1| conserved hypothetical protein [bacterium Ellin514] gi|223892701|gb|EEF59171.1| conserved hypothetical protein [bacterium Ellin514] Length = 307 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 K+ +EI +FR +I+F++ T++ G N GK+S + A+ Sbjct: 1 MKITFVEIQNFRKLKS-VRIDFSEKTTLLVGANNSGKTSATVALR 44 >gi|163814714|ref|ZP_02206103.1| hypothetical protein COPEUT_00865 [Coprococcus eutactus ATCC 27759] gi|158450349|gb|EDP27344.1| hypothetical protein COPEUT_00865 [Coprococcus eutactus ATCC 27759] Length = 569 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F F + I+ L ++ G G GKS++ + + + +G + R G Sbjct: 1 MYINKLFLKEFGKFNNRE-IKLEQGLNVLYGDEGAGKSTVRDFVTGILFGINKSRGLGSG 59 Query: 87 IKKRSIKTPM 96 S + P Sbjct: 60 RDDYSARKPK 69 >gi|310639475|ref|YP_003944233.1| DNA replication and repair protein recf [Paenibacillus polymyxa SC2] gi|309244425|gb|ADO53992.1| DNA replication and repair protein recF [Paenibacillus polymyxa SC2] Length = 371 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + +R + +++ EF + ++ GQN GK++L EAI L + R Sbjct: 1 MFVNNIVLQQYRNYEQLELNEFGP-VNLLIGQNAQGKTNLVEAIFVLALTKSHRTSRDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|308187821|ref|YP_003931952.1| DNA repair protein recN (Recombination protein N) [Pantoea vagans C9-1] gi|308058331|gb|ADO10503.1| DNA repair protein recN (Recombination protein N) [Pantoea vagans C9-1] Length = 553 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E+ I+F +T + G+ G GKS +A+ G D+ Sbjct: 2 LAQLTISNFAIVRELD-IDFQRGMTAITGETGAGKSIAIDALGLCLGG------RADADM 54 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 R + +C ++QLK Sbjct: 55 VRQGASRADLC-----ARFQLK 71 >gi|308066842|ref|YP_003868447.1| DNA repair protein RecF [Paenibacillus polymyxa E681] gi|305856121|gb|ADM67909.1| DNA replication and repair protein RecF [Paenibacillus polymyxa E681] Length = 371 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +I + +R + +++ EF + ++ GQN GK++L EAI L + R Sbjct: 1 MFVNNIVLQQYRNYEQLELNEFGP-VNLLIGQNAQGKTNLVEAIFVLALTKSHRTSRDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|256823624|ref|YP_003147587.1| DNA repair protein RecN [Kangiella koreensis DSM 16069] gi|256797163|gb|ACV27819.1| DNA repair protein RecN [Kangiella koreensis DSM 16069] Length = 552 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I F + ++ +T++ G+ G GKS + +A+ + + K Sbjct: 2 LTSIHIKDF-AIIDQLDLDLKSGMTVITGETGAGKSIMVDALSYALGERADSNVVRNGAK 60 Query: 89 KRSI 92 + I Sbjct: 61 RAEI 64 >gi|227432279|ref|ZP_03914273.1| DNA repair ATPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351946|gb|EEJ42178.1| DNA repair ATPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 787 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ +EIS F G + + +D L ++ GQN GK++L I + +G+ ++ Sbjct: 1 MKIKRLEISGF-GRWSQEAFDLSDGLQVIFGQNESGKTTLRAFIVGVLFGFPTKK 54 >gi|190341589|gb|ACE74871.1| RecN [Pantoea sp. E147] Length = 553 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E+ I+F +T + G+ G GKS +A+ G D+ Sbjct: 2 LAQLTISNFAIVRELD-IDFQRGMTAITGETGAGKSIAIDALGLCLGG------RADADM 54 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 R + +C ++QLK Sbjct: 55 VRQGASRADLC-----ARFQLK 71 >gi|116617841|ref|YP_818212.1| DNA repair ATPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096688|gb|ABJ61839.1| DNA repair ATPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 787 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ +EIS F G + + +D L ++ GQN GK++L I + +G+ ++ Sbjct: 1 MKIKRLEISGF-GRWSQEAFDLSDGLQVIFGQNESGKTTLRAFIVGVLFGFPTKK 54 >gi|308047725|ref|YP_003911291.1| DNA replication and repair protein RecF [Ferrimonas balearica DSM 9799] gi|307629915|gb|ADN74217.1| DNA replication and repair protein RecF [Ferrimonas balearica DSM 9799] Length = 355 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I + R +E A L ++ G NG GK+S+ EAI +L G + R Sbjct: 1 MGIDRLHIQNLRNIQAAT-LEPAGGLNLIYGDNGSGKTSVLEAIWFLSVGRSFR 53 >gi|126436524|ref|YP_001072215.1| hypothetical protein Mjls_3949 [Mycobacterium sp. JLS] gi|126236324|gb|ABN99724.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length = 877 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG + + IEF D + +++G N GKSS+ EA++ LF D Sbjct: 1 MKLHRLVLTNYRGISRRE-IEFPDRGVVVISGANEIGKSSMIEALDLLFAA-------KD 52 Query: 86 SIKKRSIKTPMP 97 K+ +K P Sbjct: 53 RSTKKEVKQVKP 64 >gi|108800898|ref|YP_641095.1| hypothetical protein Mmcs_3934 [Mycobacterium sp. MCS] gi|119870038|ref|YP_939990.1| hypothetical protein Mkms_4008 [Mycobacterium sp. KMS] gi|108771317|gb|ABG10039.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696127|gb|ABL93200.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length = 877 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG + + IEF D + +++G N GKSS+ EA++ LF D Sbjct: 1 MKLHRLVLTNYRGISRRE-IEFPDRGVVVISGANEIGKSSMIEALDLLFAA-------KD 52 Query: 86 SIKKRSIKTPMP 97 K+ +K P Sbjct: 53 RSTKKEVKQVKP 64 >gi|325265439|ref|ZP_08132162.1| DNA replication and repair protein RecF [Clostridium sp. D5] gi|324029297|gb|EGB90589.1| DNA replication and repair protein RecF [Clostridium sp. D5] Length = 361 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + E+ + F I+ G N GK+++ EA+ + R Sbjct: 1 MVIKSLKLKNYRNY-ELLDLTFDPKTNILYGDNAQGKTNVLEALYLSGTTKSHRGTKDRD 59 Query: 87 IKK 89 + + Sbjct: 60 LIQ 62 >gi|317181711|dbj|BAJ59495.1| hypothetical protein HPF57_0421 [Helicobacter pylori F57] Length = 394 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L EA+ + G Sbjct: 2 IQSVRIKNFKNFKD-TAIDGFTKLNIITGENNAGKSNLLEAL-YCLVG 47 >gi|315658367|ref|ZP_07911239.1| exonuclease SbcC [Staphylococcus lugdunensis M23590] gi|315496696|gb|EFU85019.1| exonuclease SbcC [Staphylococcus lugdunensis M23590] Length = 1008 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQ---KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRK 82 K L + +S+F F K F + L +++G+ G GK+ + + I + +G + + + Sbjct: 1 MKPLTLTLSNFGPFLNETIDFKQVFENQLFLISGKTGSGKTMIFDGIVYALFGVASTKSR 60 Query: 83 HGDSIKKRSIKTPMPMCM 100 ++ + PM + Sbjct: 61 TESDLRSHFAEAKEPMSV 78 >gi|314121622|ref|YP_004063741.1| gp46 endonuclease subunit [Enterobacteria phage vB_EcoM-VR7] gi|313151379|gb|ADR32435.1| gp46 endonuclease subunit [Enterobacteria phage vB_EcoM-VR7] Length = 560 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 T+V G+NG GKS+ EA+ + +G R + S K M Sbjct: 32 TLVTGKNGAGKSTFLEAVTFALFGKPFRDVKKGQLINSSNKKDM 75 >gi|220936009|ref|YP_002514908.1| ATP-dependent OLD family endonuclease [Thioalkalivibrio sp. HL-EbGR7] gi|219997319|gb|ACL73921.1| ATP-dependent OLD family endonuclease [Thioalkalivibrio sp. HL-EbGR7] Length = 674 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL +I +FR + ++ D T+V G+N GK+SLSE I L + Sbjct: 1 MKLRHAKIKNFRLLAD-VQLALEDLTTVVVGRNNSGKTSLSEIIRRLLAEGSAA 53 >gi|121708404|ref|XP_001272120.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1] gi|119400268|gb|EAW10694.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1] Length = 1382 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 9 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 49 >gi|219849814|ref|YP_002464247.1| SMC domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219544073|gb|ACL25811.1| SMC domain protein [Chloroflexus aggregans DSM 9485] Length = 1031 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 H+ ++G+NG GKS+L +AI W +G R D I + + + + A+ Y+ Sbjct: 28 GLHVLCLSGENGAGKSTLLDAITWALWGK-ARSADDDLITQGETEMMVELVFALDGRTYR 86 Query: 109 L 109 + Sbjct: 87 V 87 >gi|332971207|gb|EGK10170.1| recombination protein F [Desmospora sp. 8437] Length = 372 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +E+ FR E K++ + L + G N GK+++ E++ L G + R Sbjct: 1 MYVERLELKQFRNI-EHLKLDCSGELHMFVGPNAQGKTNILESLYVLAIGKSHR 53 >gi|326476317|gb|EGE00327.1| DNA repair protein Rad50 [Trichophyton tonsurans CBS 112818] Length = 1326 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F T + I+F LT++ G NG GK+++ E +++ G Sbjct: 11 RSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTG 51 >gi|301312200|ref|ZP_07218119.1| probable ATP-binding protein [Bacteroides sp. 20_3] gi|300829875|gb|EFK60526.1| probable ATP-binding protein [Bacteroides sp. 20_3] Length = 345 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I ++ F GF + +F + ++ G+NG GK+ + + + Sbjct: 2 INSILLTDFTGFA-NTRFDFTKGINVLIGKNGTGKTHVLKCL 42 >gi|289550866|ref|YP_003471770.1| Exonuclease SbcC [Staphylococcus lugdunensis HKU09-01] gi|289180398|gb|ADC87643.1| Exonuclease SbcC [Staphylococcus lugdunensis HKU09-01] Length = 1008 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQ---KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRK 82 K L + +S+F F K F + L +++G+ G GK+ + + I + +G + + + Sbjct: 1 MKPLTLTLSNFGPFLNETIDFKQVFENQLFLISGKTGSGKTMIFDGIVYALFGVASTKSR 60 Query: 83 HGDSIKKRSIKTPMPMCM 100 ++ + PM + Sbjct: 61 TESDLRSHFAEAKEPMSV 78 >gi|227833589|ref|YP_002835296.1| hypothetical protein cauri_1765 [Corynebacterium aurimucosum ATCC 700975] gi|262184582|ref|ZP_06044003.1| hypothetical protein CaurA7_11362 [Corynebacterium aurimucosum ATCC 700975] gi|227454605|gb|ACP33358.1| hypothetical protein cauri_1765 [Corynebacterium aurimucosum ATCC 700975] Length = 1130 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 T+YY + F++ I++ ++ F I A ++ G +G GKS+L +A+ + Sbjct: 5 TTYYPGQ--FRISRIQLINWGTFHGYFSIPVARKGFLITGGSGSGKSTLLDAMSAVLVPQ 62 Query: 78 TQRRKHGDSIKKRSIKTPMPM 98 + + + S + + Sbjct: 63 SHVKFNAASQQDLGRHNGRNL 83 >gi|212691598|ref|ZP_03299726.1| hypothetical protein BACDOR_01093 [Bacteroides dorei DSM 17855] gi|212665787|gb|EEB26359.1| hypothetical protein BACDOR_01093 [Bacteroides dorei DSM 17855] Length = 345 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I ++ F GF + +F + ++ G+NG GK+ + + + Sbjct: 2 INSILLTDFTGFA-NTRFDFTKGINVLIGKNGTGKTHVLKCL 42 >gi|198452537|ref|XP_001358825.2| GA18949 [Drosophila pseudoobscura pseudoobscura] gi|198131970|gb|EAL27968.2| GA18949 [Drosophila pseudoobscura pseudoobscura] Length = 1117 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 1/82 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ I + +F E +EF + + G+NG GKS+ A+ G + S+ Sbjct: 93 KVISIHLENFMCH-ESFTVEFGPNTNFLVGKNGSGKSATITALTVGMGGNARATSRAASV 151 Query: 88 KKRSIKTPMPMCMAVPRCKYQL 109 K + + C L Sbjct: 152 TKLIKNGETSAKIEITLCNVGL 173 >gi|124008912|ref|ZP_01693598.1| ATPase involved in DNA repair, putative [Microscilla marina ATCC 23134] gi|123985473|gb|EAY25372.1| ATPase involved in DNA repair, putative [Microscilla marina ATCC 23134] Length = 1028 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 31 DIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + + +I+F L + G G GKS++ E+I + YG +R D Sbjct: 5 KLTLQGVYSYQKKAEIDFTKLTDSGLFGIFGMVGSGKSTILESISYALYGQVERLNKQDK 64 Query: 87 I 87 + Sbjct: 65 V 65 >gi|110636467|ref|YP_676674.1| DNA repair ATPase [Cytophaga hutchinsonii ATCC 33406] gi|110279148|gb|ABG57334.1| ATPase involved in DNA repair [Cytophaga hutchinsonii ATCC 33406] Length = 1051 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 27 FKLLDIEISHFRGFTEIQ--KIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K +EI FR + ++ +F + NG+GK+S +A+E+ Sbjct: 1 MKFKKVEIQAFRAYDKVHDGTFDFTREDGKNADFISLYAPNGFGKTSFYDAVEYGITNNI 60 Query: 79 QRRKHGDSIKKR--SIKTPMPM 98 R + K S+K+ + Sbjct: 61 DRFLRKGNGKDTFNSVKSERSI 82 >gi|90408742|ref|ZP_01216889.1| putative ATP-dependent dsDNA exonuclease [Psychromonas sp. CNPT3] gi|90310159|gb|EAS38297.1| putative ATP-dependent dsDNA exonuclease [Psychromonas sp. CNPT3] Length = 1233 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + KI+F + L ++ GQ G GKS++ +A+ Y T R Sbjct: 1 MKILSLRFENLNSLKGHWKIDFQSAAFIENGLFVITGQTGAGKSTILDALCLALYQQTPR 60 >gi|83589344|ref|YP_429353.1| hypothetical protein Moth_0480 [Moorella thermoacetica ATCC 39073] gi|83572258|gb|ABC18810.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 1194 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 23/46 (50%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ F + E + F + L ++ N GKS+L +E + +G Sbjct: 8 RLRLAGFGCYREGVTVVFQEGLNVLVAPNEKGKSTLVAGLEAVLFG 53 >gi|15827553|ref|NP_301816.1| hypothetical protein ML1120 [Mycobacterium leprae TN] gi|221230030|ref|YP_002503446.1| hypothetical protein MLBr_01120 [Mycobacterium leprae Br4923] gi|13093103|emb|CAC31501.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933137|emb|CAR71215.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 873 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG T ++IEF D + +V G N GKSS+ EA++ L D Sbjct: 1 MKLHRLALTNYRG-TARREIEFPDRGVILVCGANEIGKSSMIEALDLLLE-------FRD 52 Query: 86 SIKKRSIKTPMPMC 99 K+ +K P Sbjct: 53 RSTKKEVKQVKPAN 66 >gi|320167978|gb|EFW44877.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 592 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L +++++FR F + ++ G+NG GK+ L AI Y R Sbjct: 5 LTSLQLTNFRKFKDET-FHLTTSPKVIMGRNGSGKTQLLWAIAIFLRSYNTR 55 >gi|296110651|ref|YP_003621032.1| DNA repair protein RecN [Leuconostoc kimchii IMSNU 11154] gi|295832182|gb|ADG40063.1| DNA repair protein RecN [Leuconostoc kimchii IMSNU 11154] Length = 558 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E ++F ++++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LENLIIENF-AIIEKVDLQFEGGMSVLTGETGAGKSIIIDALLMLTGG----RASSDMIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 S K + +VP+ Sbjct: 57 HGSKKAILQAVFSVPK 72 >gi|259416495|ref|ZP_05740415.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259347934|gb|EEW59711.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 1145 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + + F FT+ Q +F I+ G N GK++ EA+ LFYG+ R Sbjct: 1 MRIQRLSLDRFGHFTDRQ-YDFGSGRDGHDFHIIYGPNEAGKTTTMEAVLRLFYGFPMRE 59 Query: 82 KH 83 + Sbjct: 60 SY 61 >gi|258516123|ref|YP_003192345.1| SMC domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779828|gb|ACV63722.1| SMC domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 393 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ + I +++ F + I ++ + G NG GKS+L + +L T Sbjct: 1 MKIESLRIKNYKVFRD-VSIRDLPNMAVFLGANGSGKSTLFDVFGFLHDALTD-NIRSAL 58 Query: 87 IKKRSIK 93 +K+ K Sbjct: 59 VKRGGYK 65 >gi|239948178|ref|ZP_04699931.1| DNA repair protein RecN [Rickettsia endosymbiont of Ixodes scapularis] gi|239922454|gb|EER22478.1| DNA repair protein RecN [Rickettsia endosymbiont of Ixodes scapularis] Length = 554 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 3 HSLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|239501314|ref|ZP_04660624.1| SMC domain protein [Acinetobacter baumannii AB900] Length = 641 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI--EWLFYGYTQRRKHG 84 +L + IS+F+ F + +T + G NG GK++ +A+ + F +R Sbjct: 1 MQLQSLRISNFQSFGATPTELSLEQITYLIGPNGSGKTASLQALCRLFAFDPSLRRITRS 60 Query: 85 DSIKKRSIKTPMP 97 D + +TP Sbjct: 61 DFHVPYNEETPPE 73 >gi|222053120|ref|YP_002535482.1| DNA replication and repair protein RecF [Geobacter sp. FRC-32] gi|254790478|sp|B9M7S3|RECF_GEOSF RecName: Full=DNA replication and repair protein recF gi|221562409|gb|ACM18381.1| DNA replication and repair protein RecF [Geobacter sp. FRC-32] Length = 364 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I + FR E + A H I G NG GK++L E+I + + + Sbjct: 1 MKLNKIYLQSFRNLQETMLMP-AQHFNIFYGNNGQGKTNLLESIFIMATMKSFKTARSSD 59 Query: 87 IKK 89 + + Sbjct: 60 LVR 62 >gi|33863982|ref|NP_895542.1| recombination protein F [Prochlorococcus marinus str. MIT 9313] gi|51316349|sp|Q7V559|RECF_PROMM RecName: Full=DNA replication and repair protein recF gi|33635566|emb|CAE21890.1| putative DNA repair and genetic recombination protein RecF [Prochlorococcus marinus str. MIT 9313] Length = 365 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +R ++ ++E ++ +V G NG GKS+L EAIE L + R + Sbjct: 1 MQGYRNYS-RLQLELTENRLLVIGPNGIGKSNLLEAIELLGSLRSHRASSDQDLI 54 >gi|84687840|ref|ZP_01015709.1| hypothetical protein 1099457000239_RB2654_23113 [Maritimibacter alkaliphilus HTCC2654] gi|84664151|gb|EAQ10646.1| hypothetical protein RB2654_23113 [Rhodobacterales bacterium HTCC2654] Length = 1145 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L + + F FT+ +F I+ G N GK++ EA+ LFYG+ R Sbjct: 1 MRLQRLSLDRFGHFTDRH-FDFGSASDGHDFHIIYGPNEAGKTTTMEAVLRLFYGFPLRE 59 Query: 82 KH 83 + Sbjct: 60 GY 61 >gi|301108950|ref|XP_002903556.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] gi|262097280|gb|EEY55332.1| structural maintenance of chromosomes protein, putative [Phytophthora infestans T30-4] Length = 251 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I +F ++ + H+ + G+NG GKS++ AI+ F + G +IK Sbjct: 79 IEEIYCENFMCHR-KLRVTLSPHINFITGENGSGKSAIIAAIQICFGASARTTHRGKNIK 137 >gi|290894512|ref|ZP_06557466.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290555934|gb|EFD89494.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 548 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I+I +F+ +++ + I+ G N GKS++ EAI G Sbjct: 2 IKKIKIENFKCINGCFELDLTTGINILVGNNEAGKSTILEAIHLALSG 49 >gi|169350495|ref|ZP_02867433.1| hypothetical protein CLOSPI_01263 [Clostridium spiroforme DSM 1552] gi|169292815|gb|EDS74948.1| hypothetical protein CLOSPI_01263 [Clostridium spiroforme DSM 1552] Length = 551 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L I I +F + +I+F D +T++ G+ G GKS + +AI Sbjct: 2 LESIYIENF-AIIDQLQIDFHDQMTVLTGETGAGKSIIIDAI 42 >gi|15921404|ref|NP_377073.1| hypothetical protein ST1147 [Sulfolobus tokodaii str. 7] gi|15622190|dbj|BAB66182.1| 352aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 352 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++ I +F+ E KIE + ++ G NG GK+++ E++ Sbjct: 2 IRELSIQNFKSL-ENVKIELGK-INVLVGPNGSGKTAIIESL 41 >gi|22036085|dbj|BAC06579.1| hypothetical ATP-binding protein [Vibrio parahaemolyticus] gi|209364500|dbj|BAG74739.1| putative nucleotide-binding protein [Vibrio parahaemolyticus] Length = 560 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 S + K L+ +E+ FR F + +I F LT++ G NG GK++L +I Sbjct: 64 SDFTPKNKLNLVQLELFDFRKFKHL-RISFEPKLTVIIGNNGQGKTALLNSISKTLSWLN 122 Query: 79 QRRKHGD 85 D Sbjct: 123 ANILKED 129 >gi|329912784|ref|ZP_08275801.1| hypothetical protein IMCC9480_910 [Oxalobacteraceae bacterium IMCC9480] gi|327545538|gb|EGF30725.1| hypothetical protein IMCC9480_910 [Oxalobacteraceae bacterium IMCC9480] Length = 397 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ I + +FR F EI + ++ G NG GKS+L +L Sbjct: 1 MQVESIRLKNFRSFREITLRDIPR-FCVLVGANGTGKSTLFSVFAFL 46 >gi|317046280|ref|YP_004113928.1| SMC domain-containing protein [Pantoea sp. At-9b] gi|316947897|gb|ADU67372.1| SMC domain protein [Pantoea sp. At-9b] Length = 547 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 30 LDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAI----EWLFYGYTQR 80 +E+ +++G + +KI F HL I G NG GK+S+ E++ WL G R Sbjct: 67 STLELVNYKGIRKTVKKITFDPHLNIFVGVNGSGKTSIIESLVKASTWLVNGIRNR 122 >gi|49477000|ref|YP_035186.1| ATPase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328556|gb|AAT59202.1| conserved hypothetical protein, possible ATPase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 602 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + ++ F K+ F +T++ G+NG GKSS +A+ Sbjct: 27 YIGKLTFPFYKNFVPDTKLTFGSPVTVLVGKNGCGKSSALQAL 69 >gi|332298453|ref|YP_004440375.1| exonuclease [Treponema brennaborense DSM 12168] gi|332181556|gb|AEE17244.1| exonuclease [Treponema brennaborense DSM 12168] Length = 1030 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K L + + + F + Q I+F + ++ G+ G GK+++ +AI + YG + Sbjct: 1 MKPLKLTVKNIGPFRD-QTIDFTALGDMFLICGKTGAGKTTIFDAITYALYGKLPGARST 59 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQL 109 ++++ P A +Y L Sbjct: 60 VNVRRLRSDFAAPDEEAFVTLEYVL 84 >gi|260890885|ref|ZP_05902148.1| RECF protein [Leptotrichia hofstadii F0254] gi|260859438|gb|EEX73938.1| RECF protein [Leptotrichia hofstadii F0254] Length = 324 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 K++F + ++ G+NG GK+SL EA+ +L G + R K I+K Sbjct: 4 KLKFDRYFNLIYGKNGQGKTSLIEAVHFLATGKSFRTKKVKEIRK 48 >gi|146329428|ref|YP_001209285.1| exonuclease SbcC [Dichelobacter nodosus VCS1703A] gi|146232898|gb|ABQ13876.1| exonuclease SbcC [Dichelobacter nodosus VCS1703A] Length = 988 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + + +I+F AD + + G G GKS++ +AI YG T R Sbjct: 1 MRIESVRFHNLNALKGAWQIDFTAMADDIFAITGATGAGKSTILDAICLALYGQTPR 57 >gi|108799255|ref|YP_639452.1| ABC transporter related [Mycobacterium sp. MCS] gi|119868371|ref|YP_938323.1| ABC transporter related [Mycobacterium sp. KMS] gi|126434913|ref|YP_001070604.1| ABC transporter related [Mycobacterium sp. JLS] gi|108769674|gb|ABG08396.1| urea ABC transporter ATP-binding protein [Mycobacterium sp. MCS] gi|119694460|gb|ABL91533.1| urea ABC transporter ATP-binding protein [Mycobacterium sp. KMS] gi|126234713|gb|ABN98113.1| urea ABC transporter ATP-binding protein [Mycobacterium sp. JLS] Length = 275 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A L + L ++ F+ +++ F L + G NG GK+++ +AI L Sbjct: 19 AEYLEVRGLTVDFDGFKAVSDVNLTLFQGDLRFLIGPNGAGKTTVIDAITGLVNASGSVN 78 Query: 82 KHG 84 K G Sbjct: 79 KSG 81 >gi|302762188|ref|XP_002964516.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4 [Selaginella moellendorffii] gi|300168245|gb|EFJ34849.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4 [Selaginella moellendorffii] Length = 1160 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I R F I F LT+V G NG GK+++ E ++ G Sbjct: 4 LDKMLIKGIRSFGPDNTHVITFYRPLTLVVGANGAGKTTIIECLKNACTG 53 >gi|262197275|ref|YP_003268484.1| SMC domain protein [Haliangium ochraceum DSM 14365] gi|262080622|gb|ACY16591.1| SMC domain protein [Haliangium ochraceum DSM 14365] Length = 454 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 LL + + +F+ F +I LT++ G N GKS++ +A+ Sbjct: 2 LLHLSLKNFKSFR-KAEIPLGP-LTLLVGANASGKSNIRDALR 42 >gi|332980935|ref|YP_004462376.1| hypothetical protein Mahau_0338 [Mahella australiensis 50-1 BON] gi|332698613|gb|AEE95554.1| hypothetical protein Mahau_0338 [Mahella australiensis 50-1 BON] Length = 632 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + IS+F F + IE L ++ G N GKS++ IE + YG+ + S Sbjct: 3 IRKLYISNFGKFKDNI-IELKPGLNVIYGANEAGKSTIRSFIEGMLYGFKKADARRRSFT 61 Query: 89 KRSIK 93 + Sbjct: 62 DSRQR 66 >gi|326203425|ref|ZP_08193289.1| phage-like protein [Clostridium papyrosolvens DSM 2782] gi|325986245|gb|EGD47077.1| phage-like protein [Clostridium papyrosolvens DSM 2782] Length = 676 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R + L + I +F+G E + + G NG GK+++ +A+ WL + + K Sbjct: 25 RTVRITLKQLIIKNFKGLKEFT-LNVDGKNADIYGNNGKGKTTIKDALNWLLFDKDSQNK 83 Query: 83 HGDSIK 88 +IK Sbjct: 84 KDFAIK 89 >gi|313672243|ref|YP_004050354.1| DNA repair protein recn [Calditerrivibrio nitroreducens DSM 19672] gi|312938999|gb|ADR18191.1| DNA repair protein RecN [Calditerrivibrio nitroreducens DSM 19672] Length = 547 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F E +IEF+D L I G+ G GK+ + A++ L R D K Sbjct: 2 LKFLSVQNF-SVIEDIEIEFSDGLNIFTGETGAGKTVIINAVKILVGEKLSRAFFRDETK 60 >gi|260654351|ref|ZP_05859841.1| putative DNA replication and repair protein RecF [Jonquetella anthropi E3_33 E1] gi|260630984|gb|EEX49178.1| putative DNA replication and repair protein RecF [Jonquetella anthropi E3_33 E1] Length = 351 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++ + FR QK+ F+ + ++ G+NG GK++ EA+ Sbjct: 1 MRVVGLRTRRFRNLAA-QKVSFSSEMNLITGENGSGKTNFLEAL 43 >gi|116688230|ref|YP_833853.1| ATP-dependent OLD family endonuclease [Burkholderia cenocepacia HI2424] gi|116646319|gb|ABK06960.1| ATP-dependent endonuclease of the OLD family-like protein [Burkholderia cenocepacia HI2424] Length = 689 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL ++I +FR ++ + D T+V G+N GK+SLSE I L + + Sbjct: 1 MKLRHVQIKNFRLLSD-VDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQ 53 >gi|294795000|ref|ZP_06760135.1| conserved hypothetical protein [Veillonella sp. 3_1_44] gi|294454362|gb|EFG22736.1| conserved hypothetical protein [Veillonella sp. 3_1_44] Length = 635 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 8/53 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT---IVNGQNGYGKSSLSEAIEWLFYG 76 KL +E+ +F+G FA +L ++ G N GK+++ +++ WL +G Sbjct: 1 MKLTKLELLNFKGLKS-----FAINLNGDVVIRGDNATGKTTVFDSVCWLLFG 48 >gi|154281267|ref|XP_001541446.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411625|gb|EDN07013.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1212 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 170 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 228 >gi|308809049|ref|XP_003081834.1| ABC transporter AbcH.3 (ISS) [Ostreococcus tauri] gi|116060301|emb|CAL55637.1| ABC transporter AbcH.3 (ISS) [Ostreococcus tauri] Length = 1205 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 24/110 (21%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQN---------GYGKSSLS 67 T A+ + +E+ F F + + +V G+N G GK++L Sbjct: 356 TRRAAKGVSVSFAAVELEGFGTFQSTTRYALGSRGVCVVIGENRTDTCSDSNGAGKTTLV 415 Query: 68 EAIEWLFYGYTQRRKHG--------------DSIKKRSIKTPMPMCMAVP 103 + W G + R G DS K ++ + VP Sbjct: 416 MSPMWALTGQSDLRIDGAGSGKSLTKSDVVNDSTKFGRVRLEGHLNNGVP 465 >gi|115345573|ref|YP_771755.1| exonuclease SbcC, putative [Roseobacter denitrificans OCh 114] gi|115292894|gb|ABI93347.1| exonuclease SbcC, putative [Roseobacter denitrificans OCh 114] Length = 1019 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + + ++ F + + +EF + + G+ G GK+++ + I + +G + Sbjct: 1 MRPIRLTMTAFGPYAGTEVVEFTAALDAGIFGIYGETGAGKTTIFDGISFALFGQS 56 >gi|15240835|ref|NP_196383.1| structural maintenance of chromosomes (SMC) family protein [Arabidopsis thaliana] gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis thaliana] gi|332003807|gb|AED91190.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana] Length = 1058 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I + +F + ++ IEF D + + GQNG GKS++ A+ F + + ++ Sbjct: 22 KILRIRLENFMCHSNLE-IEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 80 Query: 88 KK 89 K Sbjct: 81 KD 82 >gi|294496357|ref|YP_003542850.1| ATP-dependent endonuclease [Methanohalophilus mahii DSM 5219] gi|292667356|gb|ADE37205.1| ATP-dependent endonuclease of the OLD family [Methanohalophilus mahii DSM 5219] Length = 584 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + ++++ ++R F+E I F++ ++ G+N GKS++ EA+ + Sbjct: 2 IEELKLENYRCFSE-HTIPFSEK-NVIVGENNAGKSTIIEALRLV 44 >gi|167759615|ref|ZP_02431742.1| hypothetical protein CLOSCI_01973 [Clostridium scindens ATCC 35704] gi|167662741|gb|EDS06871.1| hypothetical protein CLOSCI_01973 [Clostridium scindens ATCC 35704] Length = 515 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ ++ I +F F++ I D + I+ G+N GKS+L I + +G + R Sbjct: 1 MRIRELIIRNFGKFSDKD-ILLEDGINILYGENESGKSTLHAFIRGMLFGMERGRGRAS 58 >gi|157825368|ref|YP_001493088.1| DNA repair protein RecN [Rickettsia akari str. Hartford] gi|157799326|gb|ABV74580.1| DNA repair protein RecN [Rickettsia akari str. Hartford] Length = 546 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + HF + +IEF L ++ G+ G GKS L +AI + T Sbjct: 3 HSLSVKHF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|332535841|ref|ZP_08411570.1| pathogenesis like protein [Pseudoalteromonas haloplanktis ANT/505] gi|332034770|gb|EGI71310.1| pathogenesis like protein [Pseudoalteromonas haloplanktis ANT/505] Length = 702 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I+I +FR + ++ D L+++ G+N GK+S+ A++ ++R D Sbjct: 1 MKISKIQIRNFRLLKDF-SLDLEDELSLILGKNNTGKTSILTALDKFLNQSSRRSITLDD 59 >gi|327479255|gb|AEA82565.1| chromosome segregation ATPase [Pseudomonas stutzeri DSM 4166] Length = 546 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 43 IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 + + + +T+V G NG GKSS EA+E G +K+ +T Sbjct: 3 QETFDLSHDITLVYGANGTGKSSFCEALEVAMLGSISEA----QVKRVDQRT 50 >gi|326795582|ref|YP_004313402.1| SMC domain protein [Marinomonas mediterranea MMB-1] gi|326546346|gb|ADZ91566.1| SMC domain protein [Marinomonas mediterranea MMB-1] Length = 1266 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + + ++F + L + G G GKS+L +AI Y T R Sbjct: 1 MKICSLRLKNLNALKGEWYLDFESSPFDENGLFAIVGPTGAGKSTLLDAICLALYHETPR 60 Query: 81 RKH-----GDSIKKRSIKTPMPMCMAVPRCKYQ 108 D + + + + V +Y+ Sbjct: 61 GLKVSKSVNDIMTRSTSDCLAEVVFEVNGKRYR 93 >gi|308479769|ref|XP_003102093.1| hypothetical protein CRE_07623 [Caenorhabditis remanei] gi|308262473|gb|EFP06426.1| hypothetical protein CRE_07623 [Caenorhabditis remanei] Length = 334 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + LL +++ + + Q + F + ++G NG GK+ L AI + G + + Sbjct: 1 MLSLLSVKVEG-DPYLKDQTVSFNEGFNTLSGVNGSGKTLLVHAIRFGLNGKSDDSFY 57 >gi|222099021|ref|YP_002533589.1| ATPase-like protein [Thermotoga neapolitana DSM 4359] gi|221571411|gb|ACM22223.1| ATPase-like protein [Thermotoga neapolitana DSM 4359] Length = 412 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + IE +F+ F + K++ + +V G N GKS+ E+L Sbjct: 8 MFIEKIEGKNFKSF-DELKVDLG-NFNVVIGPNASGKSNFIRIFEFL 52 >gi|87120764|ref|ZP_01076657.1| hypothetical protein MED121_18525 [Marinomonas sp. MED121] gi|86163992|gb|EAQ65264.1| hypothetical protein MED121_18525 [Marinomonas sp. MED121] Length = 1127 Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KL + + ++ F + + ++ ++ G+NG GKS++ +AI+ + +G Q+ H Sbjct: 1 MKLKSVILVNWYLF-DPITVPIHGNVALI-GENGSGKSTIIDAIQTVLFGGNQKSIH 55 >gi|296393104|ref|YP_003657988.1| hypothetical protein Srot_0675 [Segniliparus rotundus DSM 44985] gi|296180251|gb|ADG97157.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length = 811 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + +SH+RG + + A T+V G N GKSS+ EA++ LF Sbjct: 1 MRLHRLVLSHYRGVRHREVVFAAQGATVVEGPNEAGKSSMVEALDLLF 48 >gi|229198638|ref|ZP_04325340.1| hypothetical protein bcere0001_41650 [Bacillus cereus m1293] gi|228584920|gb|EEK43036.1| hypothetical protein bcere0001_41650 [Bacillus cereus m1293] Length = 419 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +FK+ ++I G ++ IEF L + G NG GK+++ I Sbjct: 1 MFKVRTLDIQRINGIKDLF-IEFNPGLNFICGPNGIGKTTILNCI 44 >gi|315444715|ref|YP_004077594.1| urea ABC transporter ATP-binding protein [Mycobacterium sp. Spyr1] gi|315263018|gb|ADT99759.1| urea ABC transporter ATP-binding protein [Mycobacterium sp. Spyr1] Length = 277 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A+ L + L ++ F+ +++ F L + G NG GK+++ +AI L Sbjct: 23 AQYLEVRGLTVDFDGFKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVSASGSVN 82 Query: 82 KHG 84 K G Sbjct: 83 KSG 85 >gi|315606360|ref|ZP_07881376.1| DNA repair protein RecN [Prevotella buccae ATCC 33574] gi|315252051|gb|EFU32024.1| DNA repair protein RecN [Prevotella buccae ATCC 33574] Length = 554 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F + ++I+F +++ G+ G GKS + AI L Sbjct: 2 LKQLYIKNF-TLIDEERIDFGPGFSVITGETGAGKSIILGAIGLLLG 47 >gi|315105324|gb|EFT77300.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] Length = 868 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIKKRS 91 ++ Sbjct: 60 KVRTAQ 65 >gi|315095207|gb|EFT67183.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|327328834|gb|EGE70594.1| hypothetical protein HMPREF9341_00304 [Propionibacterium acnes HL103PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIKKRS 91 ++ Sbjct: 60 KVRTAQ 65 >gi|314965978|gb|EFT10077.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] Length = 868 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIKKRS 91 ++ Sbjct: 60 KVRTAQ 65 >gi|293571340|ref|ZP_06682371.1| conserved hypothetical protein [Enterococcus faecium E980] gi|291608556|gb|EFF37847.1| conserved hypothetical protein [Enterococcus faecium E980] Length = 906 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSIK--------TPMPMCMAVPRCKYQ 108 K P+ AV RCK Q Sbjct: 60 YTPKDGSAYGGKIWLIHPVYGEFAVERCKQQ 90 >gi|289671596|ref|ZP_06492486.1| hypothetical protein PsyrpsF_00055 [Pseudomonas syringae pv. syringae FF5] Length = 750 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE--WLFYGYTQRRKHGD 85 +L + ++ R + E Q ++F+ +L + G G GKS++ E + + G + Sbjct: 307 RLSSVRMTGLR-YLEDQDVQFSPNLNCLIGARGSGKSTILELLRIMFARDGADALSEKAK 365 Query: 86 SIKKRSIKTPMPMCM 100 + R+ +T M Sbjct: 366 AKVDRAKETFTEQVM 380 >gi|288926242|ref|ZP_06420168.1| DNA repair protein RecN [Prevotella buccae D17] gi|288337021|gb|EFC75381.1| DNA repair protein RecN [Prevotella buccae D17] Length = 554 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F + ++I+F +++ G+ G GKS + AI L Sbjct: 2 LKQLYIKNF-TLIDEERIDFGPGFSVITGETGAGKSIILGAIGLLLG 47 >gi|145224383|ref|YP_001135061.1| ABC transporter related [Mycobacterium gilvum PYR-GCK] gi|145216869|gb|ABP46273.1| urea ABC transporter ATP-binding protein [Mycobacterium gilvum PYR-GCK] Length = 277 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 A+ L + L ++ F+ +++ F L + G NG GK+++ +AI L Sbjct: 23 AQYLEVRGLTVDFDGFKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVSASGSVN 82 Query: 82 KHG 84 K G Sbjct: 83 KSG 85 >gi|325271389|ref|ZP_08137917.1| ATP-dependent OLD family endonuclease [Pseudomonas sp. TJI-51] gi|324103511|gb|EGC00830.1| ATP-dependent OLD family endonuclease [Pseudomonas sp. TJI-51] Length = 669 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 24/45 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L + + ++R + + E TI+ G N GK+++ +AI+ Sbjct: 1 MRLSKVRVQNYRSIIDTGEFEIERLKTILVGPNEAGKTAILQAIQ 45 >gi|314998044|ref|ZP_07862932.1| DNA repair protein RecN [Enterococcus faecium TX0133a01] gi|313587886|gb|EFR66731.1| DNA repair protein RecN [Enterococcus faecium TX0133a01] Length = 562 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCVLEGLFELPK 72 >gi|311069025|ref|YP_003973948.1| double strand breaks DNA repair and genetic recombination protein [Bacillus atrophaeus 1942] gi|310869542|gb|ADP33017.1| double strand breaks DNA repair and genetic recombination protein [Bacillus atrophaeus 1942] Length = 576 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAELE 65 >gi|296333420|ref|ZP_06875873.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675074|ref|YP_003866746.1| double strand breaks DNA repair and genetic recombination protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149618|gb|EFG90514.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413318|gb|ADM38437.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis subsp. spizizenii str. W23] Length = 576 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAELE 65 >gi|293568309|ref|ZP_06679633.1| DNA repair protein RecN [Enterococcus faecium E1071] gi|291589021|gb|EFF20845.1| DNA repair protein RecN [Enterococcus faecium E1071] Length = 560 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCVLEGLFELPK 72 >gi|254818681|ref|ZP_05223682.1| recombination protein F [Mycobacterium intracellulare ATCC 13950] Length = 385 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +E T+ G NG+GK++L EA+ + + R Sbjct: 1 MYVRHLGLRDFRSWA-HADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAP 59 Query: 87 IKKRS 91 + + Sbjct: 60 LIRAG 64 >gi|159030661|emb|CAO88331.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 647 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 12/74 (16%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADH----LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +L I +++++ + Q I F H + I+ G NG+GK+SL I W YG Sbjct: 1 MTLRLKQIRLTNWKCYPS-QNITFNLHPDRKIQIIFGNNGHGKTSLMTGILWCLYG---- 55 Query: 81 RKHGDSIKKRSIKT 94 GD + K ++KT Sbjct: 56 ---GDIVPKETLKT 66 >gi|148980122|ref|ZP_01815902.1| recombination protein F [Vibrionales bacterium SWAT-3] gi|145961423|gb|EDK26729.1| recombination protein F [Vibrionales bacterium SWAT-3] Length = 359 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR E I+ + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIVKQFRNI-EACDIQPSSGFNFLIGPNGSGKTSVLEAVYLLGHGRSFKS 54 >gi|116071812|ref|ZP_01469080.1| DNA repair protein RecN [Synechococcus sp. BL107] gi|116065435|gb|EAU71193.1| DNA repair protein RecN [Synechococcus sp. BL107] Length = 564 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ L +++++ + +++F D T++ G+ G GKS L +A++ + G Sbjct: 1 MLVVLTGLQLNNI-ALIDSLELDFCDGFTVLTGETGAGKSILLDALDAVLGGAQGANG 57 >gi|150017652|ref|YP_001309906.1| M protein-like MukB domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149904117|gb|ABR34950.1| MukB N-terminal domain/M protein repeat protein [Clostridium beijerinckii NCIMB 8052] Length = 1084 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +L I + ++ F + IE + T+++G+NG GKS++ +AI+++ Sbjct: 1 MMKRLTGIRLVNWHAFKDET-IEIKNS-TLLSGENGAGKSTILDAIQFVLT 49 >gi|69244722|ref|ZP_00602986.1| DNA repair protein RecN [Enterococcus faecium DO] gi|258615764|ref|ZP_05713534.1| DNA repair protein RecN [Enterococcus faecium DO] gi|289565420|ref|ZP_06445869.1| DNA repair protein RecN [Enterococcus faecium D344SRF] gi|293553176|ref|ZP_06673813.1| DNA repair protein RecN [Enterococcus faecium E1039] gi|293560483|ref|ZP_06676975.1| DNA repair protein RecN [Enterococcus faecium E1162] gi|294614720|ref|ZP_06694622.1| DNA repair protein RecN [Enterococcus faecium E1636] gi|294618982|ref|ZP_06698477.1| DNA repair protein RecN [Enterococcus faecium E1679] gi|294621594|ref|ZP_06700759.1| DNA repair protein RecN [Enterococcus faecium U0317] gi|314937880|ref|ZP_07845196.1| DNA repair protein RecN [Enterococcus faecium TX0133a04] gi|314941371|ref|ZP_07848264.1| DNA repair protein RecN [Enterococcus faecium TX0133C] gi|314950130|ref|ZP_07853416.1| DNA repair protein RecN [Enterococcus faecium TX0082] gi|314951329|ref|ZP_07854383.1| DNA repair protein RecN [Enterococcus faecium TX0133A] gi|314992840|ref|ZP_07858241.1| DNA repair protein RecN [Enterococcus faecium TX0133B] gi|68196313|gb|EAN10742.1| DNA repair protein RecN [Enterococcus faecium DO] gi|289162749|gb|EFD10600.1| DNA repair protein RecN [Enterococcus faecium D344SRF] gi|291592458|gb|EFF24065.1| DNA repair protein RecN [Enterococcus faecium E1636] gi|291594643|gb|EFF26025.1| DNA repair protein RecN [Enterococcus faecium E1679] gi|291598759|gb|EFF29811.1| DNA repair protein RecN [Enterococcus faecium U0317] gi|291602586|gb|EFF32801.1| DNA repair protein RecN [Enterococcus faecium E1039] gi|291605631|gb|EFF35073.1| DNA repair protein RecN [Enterococcus faecium E1162] gi|313592644|gb|EFR71489.1| DNA repair protein RecN [Enterococcus faecium TX0133B] gi|313596546|gb|EFR75391.1| DNA repair protein RecN [Enterococcus faecium TX0133A] gi|313599794|gb|EFR78637.1| DNA repair protein RecN [Enterococcus faecium TX0133C] gi|313642738|gb|EFS07318.1| DNA repair protein RecN [Enterococcus faecium TX0133a04] gi|313643571|gb|EFS08151.1| DNA repair protein RecN [Enterococcus faecium TX0082] Length = 560 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCVLEGLFELPK 72 >gi|332530751|ref|ZP_08406679.1| SMC domain protein [Hylemonella gracilis ATCC 19624] gi|332039784|gb|EGI76182.1| SMC domain protein [Hylemonella gracilis ATCC 19624] Length = 938 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + V G NG GK++L +A+ L + R + Sbjct: 1 MFHLQSLELLHW-DYCQRLTLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLECSGGRSYK 59 Query: 85 DSIKKRSIKT 94 + T Sbjct: 60 TYARHAKADT 69 >gi|325672991|ref|ZP_08152685.1| ATP-dependent endonuclease [Rhodococcus equi ATCC 33707] gi|325556244|gb|EGD25912.1| ATP-dependent endonuclease [Rhodococcus equi ATCC 33707] Length = 610 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I +++FRG + D +++ G+N GKS++ EA++ + Sbjct: 1 MKVRRISLTNFRGVQRGTVL--LDGHSLLVGRNSVGKSTICEALDLVLG 47 >gi|284050687|ref|ZP_06380897.1| SMC domain-containing protein [Arthrospira platensis str. Paraca] gi|291566043|dbj|BAI88315.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 395 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++I F+ +E + G NG GKS+L EA+ + +S+ Sbjct: 2 IREVKIRGFKSIYSAT-LELGR-VNCFIGANGSGKSNLLEALG-VLGAAANGVVDDESLL 58 Query: 89 KRSIKTPMP 97 +R ++ +P Sbjct: 59 RRGVRAGLP 67 >gi|91226175|ref|ZP_01261065.1| hypothetical protein V12G01_08680 [Vibrio alginolyticus 12G01] gi|91189409|gb|EAS75687.1| hypothetical protein V12G01_08680 [Vibrio alginolyticus 12G01] Length = 544 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ G + K Sbjct: 1 MRLERIEISGFRGI-KRLSLSF-DELTTLIGENTWGKSSLLDALSIALPANGSLYQFKLK 58 Query: 85 DSIKKRSIKTPMPMCMAVPRC 105 D SI P + + C Sbjct: 59 DFHVDYSISHPQTQHLQIIVC 79 >gi|49481897|gb|AAT66660.1| DNA repair and genetic recombination protein [Geobacillus lituanicus] Length = 573 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LTELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|325474162|gb|EGC77350.1| hypothetical protein HMPREF9353_01700 [Treponema denticola F0402] Length = 366 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K +++IS+FRG + K++ + + ++ G+N GK+SL EA+ +L G + Sbjct: 1 MKFDELQISNFRGI-DNAKLKKLEQVNLIVGKNNSGKTSLLEAM-FLLSGMS 50 >gi|330919788|ref|XP_003298758.1| hypothetical protein PTT_09563 [Pyrenophora teres f. teres 0-1] gi|311327894|gb|EFQ93145.1| hypothetical protein PTT_09563 [Pyrenophora teres f. teres 0-1] Length = 1553 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 35 SHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 ++ + I + + + G NG GKS++ ++I ++ +++ K Sbjct: 384 EGYKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGINNLSVVRAQNLQDLIYK 443 >gi|325678551|ref|ZP_08158162.1| DNA replication and repair protein RecF [Ruminococcus albus 8] gi|324109770|gb|EGC03975.1| DNA replication and repair protein RecF [Ruminococcus albus 8] Length = 379 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ ++ F+ I I+ + + I G+N GK++L EAI + R Sbjct: 1 MFITELSVNGFKNLKGI-SIKPHEKINIFCGRNAQGKTNLIEAIWLCSGARSFRSTKDRR 59 Query: 87 IK 88 + Sbjct: 60 MI 61 >gi|190341575|gb|ACE74864.1| RecN [Enterobacter sp. E440] Length = 553 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T + G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFHAGMTAITGETGAGKSIAIDALGLCLGG 48 >gi|190341573|gb|ACE74863.1| RecN [Enterobacter sp. E466] Length = 516 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ I+F +T + G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-IDFHAGMTAITGETGAGKSIAIDALGLCLGG 48 >gi|207110977|ref|ZP_03245139.1| hypothetical protein HpylH_18109 [Helicobacter pylori HPKX_438_CA4C1] Length = 56 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + I +F+ F + +I+ L I+ G N GKS+L EA+ + G + Sbjct: 2 IQSVRIKNFKTFKD-TQIDGFTKLNIITGGNNVGKSNLLEAL-YCLVGKS 49 >gi|149180672|ref|ZP_01859176.1| exonuclease, SbcC family protein [Bacillus sp. SG-1] gi|148851825|gb|EDL65971.1| exonuclease, SbcC family protein [Bacillus sp. SG-1] Length = 1044 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 + L + + F + + I+F + +++G+ G GK+++ + I + YG + Sbjct: 1 MRPLKLTMQAFGPYPSAETIDFQLLGHRTMFVISGKTGAGKTTIFDGISFAIYGKASGED 60 Query: 82 KHGDSIKKR 90 +HG+ ++ + Sbjct: 61 RHGNDLRSQ 69 >gi|327448733|gb|EGE95387.1| RecF/RecN/SMC protein [Propionibacterium acnes HL043PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|327334436|gb|EGE76147.1| putative RecF/RecN/SMC N domain protein [Propionibacterium acnes HL097PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|315078347|gb|EFT50384.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] Length = 854 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|314985924|gb|EFT30016.1| RecF/RecN/SMC protein [Propionibacterium acnes HL005PA2] gi|314989233|gb|EFT33324.1| RecF/RecN/SMC protein [Propionibacterium acnes HL005PA3] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|314968771|gb|EFT12869.1| RecF/RecN/SMC protein [Propionibacterium acnes HL037PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|313819089|gb|EFS56803.1| RecF/RecN/SMC protein [Propionibacterium acnes HL046PA2] gi|313821633|gb|EFS59347.1| RecF/RecN/SMC protein [Propionibacterium acnes HL036PA1] gi|313823769|gb|EFS61483.1| RecF/RecN/SMC protein [Propionibacterium acnes HL036PA2] gi|314926109|gb|EFS89940.1| RecF/RecN/SMC protein [Propionibacterium acnes HL036PA3] gi|314960949|gb|EFT05050.1| RecF/RecN/SMC protein [Propionibacterium acnes HL002PA2] gi|315084918|gb|EFT56894.1| RecF/RecN/SMC protein [Propionibacterium acnes HL027PA2] gi|315087449|gb|EFT59425.1| RecF/RecN/SMC protein [Propionibacterium acnes HL002PA3] gi|328757674|gb|EGF71290.1| RecF/RecN/SMC protein [Propionibacterium acnes HL020PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|313794111|gb|EFS42131.1| RecF/RecN/SMC protein [Propionibacterium acnes HL110PA1] gi|313803232|gb|EFS44428.1| RecF/RecN/SMC protein [Propionibacterium acnes HL110PA2] gi|313839234|gb|EFS76948.1| RecF/RecN/SMC protein [Propionibacterium acnes HL086PA1] gi|314964007|gb|EFT08107.1| RecF/RecN/SMC protein [Propionibacterium acnes HL082PA1] gi|327457544|gb|EGF04199.1| RecF/RecN/SMC protein [Propionibacterium acnes HL092PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|313771600|gb|EFS37566.1| RecF/RecN/SMC protein [Propionibacterium acnes HL074PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|289428154|ref|ZP_06429853.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes J165] gi|289158634|gb|EFD06838.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes J165] gi|313808566|gb|EFS47026.1| RecF/RecN/SMC protein [Propionibacterium acnes HL087PA2] gi|313826873|gb|EFS64587.1| RecF/RecN/SMC protein [Propionibacterium acnes HL063PA1] gi|314979095|gb|EFT23189.1| RecF/RecN/SMC protein [Propionibacterium acnes HL072PA2] gi|315089641|gb|EFT61617.1| RecF/RecN/SMC protein [Propionibacterium acnes HL072PA1] gi|327334018|gb|EGE75733.1| putative RecF/RecN/SMC N domain protein [Propionibacterium acnes HL096PA3] gi|327450391|gb|EGE97045.1| RecF/RecN/SMC protein [Propionibacterium acnes HL013PA2] gi|332676646|gb|AEE73462.1| ATPase involved in DNA repair [Propionibacterium acnes 266] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|289425884|ref|ZP_06427636.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes SK187] gi|289153660|gb|EFD02369.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes SK187] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|302404285|ref|XP_002999980.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261361162|gb|EEY23590.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 1125 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++E +F E +E + + G+NG GKS++ A+ G S+K Sbjct: 127 IENVECINFMCH-ERLYVELGPLINFIVGENGSGKSAVLTALTLCLGAKASSTNRGGSLK 185 >gi|196250835|ref|ZP_03149521.1| SMC protein-like protein [Geobacillus sp. G11MC16] gi|196209673|gb|EDY04446.1| SMC protein-like protein [Geobacillus sp. G11MC16] Length = 508 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + D+ I +FR +I + F + I+ G+N GKS++ +A++ L Sbjct: 1 MFVSDLYIKNFRSIKDIH-VSFKEGKNILIGKNNAGKSNIIKALDLLLGE 49 >gi|50843691|ref|YP_056918.1| putative ATPase involved in DNA repair [Propionibacterium acnes KPA171202] gi|295131782|ref|YP_003582445.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes SK137] gi|50841293|gb|AAT83960.1| conserved protein, putative ATPase involved in DNA repair [Propionibacterium acnes KPA171202] gi|291377339|gb|ADE01194.1| RecF/RecN/SMC N-terminal domain protein [Propionibacterium acnes SK137] gi|313765132|gb|EFS36496.1| RecF/RecN/SMC protein [Propionibacterium acnes HL013PA1] gi|313811998|gb|EFS49712.1| RecF/RecN/SMC protein [Propionibacterium acnes HL083PA1] gi|313813920|gb|EFS51634.1| RecF/RecN/SMC protein [Propionibacterium acnes HL025PA1] gi|313817143|gb|EFS54857.1| RecF/RecN/SMC protein [Propionibacterium acnes HL059PA1] gi|313829243|gb|EFS66957.1| RecF/RecN/SMC protein [Propionibacterium acnes HL063PA2] gi|313832432|gb|EFS70146.1| RecF/RecN/SMC protein [Propionibacterium acnes HL007PA1] gi|313834137|gb|EFS71851.1| RecF/RecN/SMC protein [Propionibacterium acnes HL056PA1] gi|314916862|gb|EFS80693.1| RecF/RecN/SMC protein [Propionibacterium acnes HL005PA4] gi|314919040|gb|EFS82871.1| RecF/RecN/SMC protein [Propionibacterium acnes HL050PA1] gi|314921130|gb|EFS84961.1| RecF/RecN/SMC protein [Propionibacterium acnes HL050PA3] gi|314932524|gb|EFS96355.1| RecF/RecN/SMC protein [Propionibacterium acnes HL067PA1] gi|314956247|gb|EFT00619.1| RecF/RecN/SMC protein [Propionibacterium acnes HL027PA1] gi|314958745|gb|EFT02847.1| RecF/RecN/SMC protein [Propionibacterium acnes HL002PA1] gi|314975097|gb|EFT19192.1| RecF/RecN/SMC protein [Propionibacterium acnes HL053PA1] gi|314977508|gb|EFT21603.1| RecF/RecN/SMC protein [Propionibacterium acnes HL045PA1] gi|314985886|gb|EFT29978.1| RecF/RecN/SMC protein [Propionibacterium acnes HL005PA1] gi|315081440|gb|EFT53416.1| RecF/RecN/SMC protein [Propionibacterium acnes HL078PA1] gi|315096862|gb|EFT68838.1| RecF/RecN/SMC protein [Propionibacterium acnes HL038PA1] gi|315100077|gb|EFT72053.1| RecF/RecN/SMC protein [Propionibacterium acnes HL059PA2] gi|315102762|gb|EFT74738.1| RecF/RecN/SMC protein [Propionibacterium acnes HL046PA1] gi|315107315|gb|EFT79291.1| RecF/RecN/SMC protein [Propionibacterium acnes HL030PA1] gi|315110535|gb|EFT82511.1| RecF/RecN/SMC protein [Propionibacterium acnes HL030PA2] gi|327333026|gb|EGE74758.1| putative RecF/RecN/SMC N domain protein [Propionibacterium acnes HL096PA2] gi|327449072|gb|EGE95726.1| RecF/RecN/SMC protein [Propionibacterium acnes HL043PA2] gi|327455550|gb|EGF02205.1| RecF/RecN/SMC protein [Propionibacterium acnes HL087PA3] gi|327456207|gb|EGF02862.1| RecF/RecN/SMC protein [Propionibacterium acnes HL083PA2] gi|328756785|gb|EGF70401.1| RecF/RecN/SMC protein [Propionibacterium acnes HL087PA1] gi|328759068|gb|EGF72684.1| RecF/RecN/SMC protein [Propionibacterium acnes HL025PA2] gi|328762176|gb|EGF75672.1| putative RecF/RecN/SMC N domain protein [Propionibacterium acnes HL099PA1] Length = 868 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTSTKASSKSR 59 Query: 86 SIK 88 ++ Sbjct: 60 KVR 62 >gi|56479200|ref|YP_160789.1| hypothetical protein ebA6581 [Aromatoleum aromaticum EbN1] gi|56315243|emb|CAI09888.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 608 Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + I +FRG + F+ T++ G N GKS++ EA++ + Sbjct: 1 MRVSRLSIENFRGIA-NAVLHFS-GHTLLIGGNNVGKSTICEALDLVLG 47 >gi|325289393|ref|YP_004265574.1| SMC domain-containing protein [Syntrophobotulus glycolicus DSM 8271] gi|324964794|gb|ADY55573.1| SMC domain-containing protein [Syntrophobotulus glycolicus DSM 8271] Length = 1055 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L++ +S F + +I + L ++ G G GK+++ +AI + + Sbjct: 1 MKPLNVVMSAFGPYAGRVEIPLRQIGGEGLFLITGDTGAGKTTIFDAIAFALFDGASGSV 60 Query: 83 H 83 Sbjct: 61 R 61 >gi|323455275|gb|EGB11144.1| hypothetical protein AURANDRAFT_22479 [Aureococcus anophagefferens] Length = 211 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSE 68 + + I R F+ + IEF LT++ G NG GK+++ E Sbjct: 4 IEKLAIRGIRAFSPEREEAIEFQTPLTMIVGANGCGKTTVIE 45 >gi|320169947|gb|EFW46846.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 631 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY-----TQRR 81 F+L + + +F+ F +I + I+ G NG GK+ + AI G+ + + Sbjct: 13 FRLHQLRLQNFKKFEDIT-LTLTPSPKIIVGANGSGKTQILWAILIFLRGHNSRIPSSKH 71 Query: 82 KHGDSIKKRSIK 93 H D + ++ Sbjct: 72 FHSDPFRFTELE 83 >gi|320539856|ref|ZP_08039515.1| putative gap repair protein [Serratia symbiotica str. Tucson] gi|320030042|gb|EFW12062.1| putative gap repair protein [Serratia symbiotica str. Tucson] Length = 361 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALVPGFNFLVGANGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|310816809|ref|YP_003964773.1| recombination protein F [Ketogulonicigenium vulgare Y25] gi|308755544|gb|ADO43473.1| recombination protein F [Ketogulonicigenium vulgare Y25] Length = 370 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++SHFR + ++ F G NG GK++L EAI L G RR + + Sbjct: 6 LNALKLSHFRSH-KRAELAFDGRPVAFVGSNGAGKTNLIEAISLLSPGRGLRRAVTEDLA 64 Query: 89 KR 90 +R Sbjct: 65 RR 66 >gi|262402924|ref|ZP_06079484.1| predicted ATPase possibly involved in inorganic ion transport [Vibrio sp. RC586] gi|262350423|gb|EEY99556.1| predicted ATPase possibly involved in inorganic ion transport [Vibrio sp. RC586] Length = 861 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 17 LTSYYARKLIFKLLDI-EISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIE 71 ++ Y A + +L+ + ++ E QK++F D LTIV G NG GKSS + ++ Sbjct: 66 ISGYMAEENSVRLISLSQVEGVAALAEDQKLDFRKDGLTIVYGDNGAGKSSYTSILK 122 >gi|261212875|ref|ZP_05927159.1| predicted ATPase possibly involved in inorganic ion transport [Vibrio sp. RC341] gi|260837940|gb|EEX64617.1| predicted ATPase possibly involved in inorganic ion transport [Vibrio sp. RC341] Length = 756 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 17 LTSYYARKLIFKLLDI-EISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIE 71 ++ Y A + +L+ + ++ E QK++F D LTIV G NG GKSS + ++ Sbjct: 66 ISGYMAEENSVRLISLSQVEGVAALAEDQKLDFRKDGLTIVYGDNGAGKSSYTSILK 122 >gi|260767431|ref|ZP_05876368.1| hypothetical protein VFA_000482 [Vibrio furnissii CIP 102972] gi|260617543|gb|EEX42725.1| hypothetical protein VFA_000482 [Vibrio furnissii CIP 102972] Length = 675 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 26 IFKLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + + IEI +FR F + ++ L I++G N GKS++ A+ F G+T Sbjct: 8 MVTIEKIEIKNFRSFGNRKGDTTNLDKLSSLNILSGSNDSGKSNIIRALNLFFNGHT 64 >gi|269797282|ref|YP_003311182.1| hypothetical protein Vpar_0215 [Veillonella parvula DSM 2008] gi|269093911|gb|ACZ23902.1| conserved hypothetical protein [Veillonella parvula DSM 2008] Length = 960 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I F + + I + + ++ G N GK+SL E + L +G + Sbjct: 1 MNIKRIRFDEFGPYRDWSFITGDNGVQLMYGPNESGKTSLLEGMRTLLFGDIHK 54 >gi|206900665|ref|YP_002251333.1| DNA double-strand break repair Rad50 ATPase, putative [Dictyoglomus thermophilum H-6-12] gi|206739768|gb|ACI18826.1| DNA double-strand break repair Rad50 ATPase, putative [Dictyoglomus thermophilum H-6-12] Length = 983 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + KL+ + + +F+ + I F + ++ G+N GKS++ EAI + +G Sbjct: 1 MIKLVSLTLRNFKQYR-TAHINFPEKGKILIKGKNEAGKSTIFEAIGFALFG 51 >gi|120598026|ref|YP_962600.1| ATPase [Shewanella sp. W3-18-1] gi|120558119|gb|ABM24046.1| ATPase, possibly involved in inorganic ion transport [Shewanella sp. W3-18-1] Length = 861 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 17 LTSYYARKLIFKLLDI-EISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIE 71 ++ Y A + +L+ + ++ E QK++F D LTIV G NG GKSS + ++ Sbjct: 66 ISGYMAEENSVRLISLSQVEGVAALAEDQKLDFRKDGLTIVYGDNGAGKSSYTSILK 122 >gi|49474938|ref|YP_032979.1| recombination protein F [Bartonella henselae str. Houston-1] gi|49237743|emb|CAF26935.1| DNA replication and repair protein recF [Bartonella henselae str. Houston-1] Length = 377 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ +R + I F+ + G NG GK++L EA+ +L G RR Sbjct: 8 VAVRQLKLLRYRNYFSFN-IRFSGQHVVFTGHNGSGKTNLLEALSFLSPGRGLRR 61 >gi|309776033|ref|ZP_07671025.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916315|gb|EFP62063.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae bacterium 3_1_53] Length = 237 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV-- 102 ++F +T + G+NG GKS+L EAI + YG+ + + + T + + Sbjct: 31 TLKFHKQITFLTGENGSGKSTLLEAIA-VAYGFNPEGGTKNY-RFYTRDTHSSLYEGIHM 88 Query: 103 ------PRCKYQLK 110 P C Y L+ Sbjct: 89 SRGPYQPSCSYFLR 102 >gi|301048685|ref|ZP_07195694.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299431|gb|EFJ55816.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 633 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI---EWLFYGYTQRRKH 83 ++ I + +F+ F I + D I+ G+N GKS++ EAI E + Y + Sbjct: 3 LRISKISLKNFKSFKNISIVPNPD-FNIIIGENSAGKSTVFEAIHLWEKCYKTYILASRK 61 Query: 84 GDSIKKRS 91 G K+S Sbjct: 62 GFYKVKKS 69 >gi|297617447|ref|YP_003702606.1| SMC domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145284|gb|ADI02041.1| SMC domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 536 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL ++I ++R E++ E D L + G N GKS++ A+ + Sbjct: 1 MKLERVKIQNYRSIKELE-FEVGD-LCALIGPNNVGKSNILSALALVLGET 49 >gi|269139557|ref|YP_003296258.1| hypothetical protein ETAE_2212 [Edwardsiella tarda EIB202] gi|267985218|gb|ACY85047.1| hypothetical protein ETAE_2212 [Edwardsiella tarda EIB202] gi|304559445|gb|ADM42109.1| Predicted OLD family ATP-dependent endonuclease [Edwardsiella tarda FL6-60] Length = 556 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ FRG + D+ T++ G+N +GKSSL +A+ Sbjct: 1 MYLERIEVVGFRGIN-RISLSLDDN-TVLIGENAWGKSSLLDALTLCL 46 >gi|238920387|ref|YP_002933902.1| hypothetical protein NT01EI_2497 [Edwardsiella ictaluri 93-146] gi|238869956|gb|ACR69667.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 296 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ FRG + D+ T++ G+N +GKSSL +A+ Sbjct: 1 MYLERIEVVGFRGIN-RISLSLDDN-TVLIGENAWGKSSLLDALTLCL 46 >gi|291456156|ref|ZP_06595546.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213] gi|291382228|gb|EFE89746.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213] Length = 628 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + +++ +F E+ ++F + + G N GK+++ A+++L G T Sbjct: 1 MYISHLQLRNFMCHHELD-LDFGSGVNYLVGDNNSGKTTVLRALQYLHDGVT 51 >gi|108763273|ref|YP_628527.1| DNA replication and repair protein RecF [Myxococcus xanthus DK 1622] gi|122981391|sp|Q1DFP6|RECF_MYXXD RecName: Full=DNA replication and repair protein recF gi|108467153|gb|ABF92338.1| DNA replication and repair protein RecF [Myxococcus xanthus DK 1622] Length = 380 Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +LL + + FR ++Q + H TI GQNG GK++L EA+ +L R Sbjct: 1 MRLLALHVHDFRNLPQVQLTP-SAHATIAVGQNGQGKTNLLEALYFLATLKPLRAGRLSE 59 Query: 87 IKKRSIKTPM 96 + + + Sbjct: 60 LVRWGSQGAR 69 >gi|330858581|ref|YP_004414956.1| putative recombination endonuclease subunit [Shigella phage Shfl2] gi|291290270|dbj|BAI83065.1| recombination endonuclease subunit [Enterobacteria phage AR1] gi|327397515|gb|AEA73017.1| putative recombination endonuclease subunit [Shigella phage Shfl2] Length = 546 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R + + K + + M KY +K Sbjct: 18 TLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIK 77 >gi|269137361|ref|YP_003294061.1| recombinational DNA repair ATPase [Edwardsiella tarda EIB202] gi|267983021|gb|ACY82850.1| recombinational DNA repair ATPase [Edwardsiella tarda EIB202] gi|304557462|gb|ADM40126.1| DNA recombination and repair protein RecF [Edwardsiella tarda FL6-60] Length = 358 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLVIRDFRNI-EDADLALAPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKK 89 + + Sbjct: 60 VIR 62 >gi|302876315|ref|YP_003844948.1| AAA ATPase [Clostridium cellulovorans 743B] gi|307687050|ref|ZP_07629496.1| AAA ATPase [Clostridium cellulovorans 743B] gi|302579172|gb|ADL53184.1| AAA ATPase [Clostridium cellulovorans 743B] Length = 251 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L EI F + ++ +EF +T + G+NG GKS++ EAI Sbjct: 13 IELKREEIEDFSKYPFFLPAIINLKNLEFHPKVTFIVGENGSGKSTILEAI 63 >gi|229825219|ref|ZP_04451288.1| hypothetical protein GCWU000182_00571 [Abiotrophia defectiva ATCC 49176] gi|229790591|gb|EEP26705.1| hypothetical protein GCWU000182_00571 [Abiotrophia defectiva ATCC 49176] Length = 650 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++++ +F + EF + ++ G NG GK++ EA+ YG Sbjct: 3 IKELKLHNFGVYAGTNVFEFKANKPIVLIGGLNGRGKTTFLEAVLLSLYG 52 >gi|154505527|ref|ZP_02042265.1| hypothetical protein RUMGNA_03064 [Ruminococcus gnavus ATCC 29149] gi|153794185|gb|EDN76605.1| hypothetical protein RUMGNA_03064 [Ruminococcus gnavus ATCC 29149] Length = 495 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +IEI +F F+ Q+ F D + + G+N +GKS++ ++ + +G + R Sbjct: 1 MKIKEIEIKNFGKFS-NQRFVFRDGIQVFYGENEFGKSTIYGFLKAMLFGMERGRGK 56 >gi|325091689|gb|EGC44999.1| DNA repair protein RAD18 [Ajellomyces capsulatus H88] Length = 1161 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 121 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 179 >gi|225554862|gb|EEH03156.1| DNA repair protein [Ajellomyces capsulatus G186AR] Length = 1161 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 121 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 179 >gi|321311908|ref|YP_004204195.1| DNA repair/recombination protein [Bacillus subtilis BSn5] gi|320018182|gb|ADV93168.1| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis BSn5] Length = 576 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGEAKAELE 65 >gi|291515283|emb|CBK64493.1| recF protein [Alistipes shahii WAL 8301] Length = 415 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + +F+ ++ + + + + G NG GK+++ +A+ +L Sbjct: 1 MHLKKIALLNFKNISQEE-LALCPGINCLVGDNGAGKTNVVDAVYYL 46 >gi|291484865|dbj|BAI85940.1| DNA repair protein RecN [Bacillus subtilis subsp. natto BEST195] Length = 576 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGEAKAELE 65 >gi|225619840|ref|YP_002721097.1| putative ATP-binding protein [Brachyspira hyodysenteriae WA1] gi|225214659|gb|ACN83393.1| putative ATP-binding protein [Brachyspira hyodysenteriae WA1] Length = 360 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + ++ I++F F + +F+ + I G+NG GK+ L +AI + Sbjct: 13 MYVENVRINNFTVFKDCYT-DFSKGVNIFIGENGTGKTHLLKAI-YCLNES 61 >gi|221310347|ref|ZP_03592194.1| DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. 168] gi|221314671|ref|ZP_03596476.1| DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319594|ref|ZP_03600888.1| DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. JH642] gi|221323870|ref|ZP_03605164.1| DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. SMY] gi|255767536|ref|NP_390304.2| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. 168] gi|239938691|sp|P17894|RECN_BACSU RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|225185164|emb|CAB14355.2| factor for double strand breaks DNA repair and genetic recombination [Bacillus subtilis subsp. subtilis str. 168] Length = 576 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGEAKAELE 65 >gi|221126592|ref|XP_002154345.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 490 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 20/30 (66%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + T + G NG GKS++ +A+ ++F +Q+ Sbjct: 270 NFTSIVGPNGSGKSNVIDAMLFVFGYRSQK 299 >gi|551689|gb|AAA22209.1| unidentified ORF2 (ttg start codon) [Bacillus subtilis] Length = 111 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGEAKAELE 65 >gi|143402|gb|AAA22691.1| recombination protein (ttg start codon) [Bacillus subtilis] gi|1303923|dbj|BAA12579.1| RecN [Bacillus subtilis] Length = 576 Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGEAKAELE 65 >gi|320334765|ref|YP_004171476.1| DNA replication and repair protein recF [Deinococcus maricopensis DSM 21211] gi|319756054|gb|ADV67811.1| DNA replication and repair protein recF [Deinococcus maricopensis DSM 21211] Length = 368 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + H+R + ++ +T + G+NG GK++L EA G T Sbjct: 12 VHLRALTTLHYRNLS-PATLDLPRGITSIWGENGAGKTNLLEAAYLALTGLT 62 >gi|302384561|ref|YP_003820383.1| hypothetical protein Closa_0117 [Clostridium saccharolyticum WM1] gi|302195189|gb|ADL02760.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 620 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K++D+ I+ F F + F D L IV G+N GKS++ I + +G ++R Sbjct: 1 MKIIDLYINGFGKFHGRN-LTFRDGLNIVYGKNEAGKSTIHTFIRGMLFGIERQRGRAS 58 >gi|238790539|ref|ZP_04634306.1| Predicted ATP-binding protein involved in virulence [Yersinia frederiksenii ATCC 33641] gi|238721336|gb|EEQ13009.1| Predicted ATP-binding protein involved in virulence [Yersinia frederiksenii ATCC 33641] Length = 541 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI----EW---LFYGYTQ 79 F L +++ +++GF E+ I + + ++ NGYGK+ + EAI W L YG Q Sbjct: 57 FCLKKVKLVNYKGFNEL-SINLDNDIILIAANNGYGKTGILEAIYLSLSWFYRLVYGSNQ 115 Query: 80 RRKHGD-SIKKRSIKTPMPMCMAV 102 K GD I + M + + + Sbjct: 116 GWKFGDKYISRLVSNAAMLVNLDI 139 >gi|134298454|ref|YP_001111950.1| SMC domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051154|gb|ABO49125.1| SMC domain protein [Desulfotomaculum reducens MI-1] Length = 1109 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + ++ + + Q I+F+D + + G+NG GKS++ +A++ + G T + Sbjct: 4 LTRILLINWH-YIKYQCIDFSD-INFLTGKNGSGKSTIIDALQLVLLGDTSGFYFNKAAN 61 Query: 89 KRSIKT 94 +S ++ Sbjct: 62 DKSQRS 67 >gi|117921399|ref|YP_870591.1| hypothetical protein Shewana3_2959 [Shewanella sp. ANA-3] gi|117613731|gb|ABK49185.1| hypothetical protein Shewana3_2959 [Shewanella sp. ANA-3] Length = 533 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%) Query: 27 FKLLDIEI-SHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 K+ + I S F+ E K++F + +T+V G+NG GKS++ EA+ Sbjct: 1 MKVDKLHIRSRFKNL-ENVKVDFDEDHLMTVVVGRNGSGKSNVLEAL 46 >gi|295425412|ref|ZP_06818110.1| recombination protein F [Lactobacillus amylolyticus DSM 11664] gi|295064914|gb|EFG55824.1| recombination protein F [Lactobacillus amylolyticus DSM 11664] Length = 375 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + ++R E F ++ I G+N GK++L EAI +L + R Sbjct: 1 MYLDHFIVQNYRNL-EKIDTNFDSNVNIFIGKNAQGKTNLLEAIYFLALTRSHR 53 >gi|326319531|ref|YP_004237203.1| SMC domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376367|gb|ADX48636.1| SMC domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 944 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|120613396|ref|YP_973074.1| SMC domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591860|gb|ABM35300.1| SMC domain protein [Acidovorax citrulli AAC00-1] Length = 944 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ H+ + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELVHW-DYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYR 59 Query: 85 DSIKKRSIKT 94 + +T Sbjct: 60 TYARHAGAQT 69 >gi|71032011|ref|XP_765647.1| hypothetical protein [Theileria parva strain Muguga] gi|68352604|gb|EAN33364.1| hypothetical protein TP01_0120 [Theileria parva] Length = 179 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + + +F + + +L ++ G+NG GKS++ +AI F ++ Sbjct: 35 KIIKVTLFNFLNHAHLT-FSCSPYLNLIFGRNGQGKSAIVQAIALCFGATGHSVGRDTNL 93 Query: 88 KK 89 + Sbjct: 94 NR 95 >gi|289613822|emb|CBI59305.1| putative SMC6 protein [Sordaria macrospora] Length = 1199 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I +F T E L + G+NG GKS++ AI G G S+K Sbjct: 123 LQSITCINFMCHT-RLHCELGPLLNFIVGENGSGKSAILTAITLCLGGKASSTNRGGSLK 181 >gi|240274239|gb|EER37756.1| DNA repair protein RAD18 [Ajellomyces capsulatus H143] Length = 1148 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G G S+K Sbjct: 121 IERVDCYNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGGKASVTNRGQSLK 179 >gi|75908453|ref|YP_322749.1| DNA repair protein RecN [Anabaena variabilis ATCC 29413] gi|75702178|gb|ABA21854.1| DNA replication and repair protein RecN [Anabaena variabilis ATCC 29413] Length = 582 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +++F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LLCLRIENF-ALIDQLELDFGAGLNVLTGETGAGKSIILDAIDAVLGGKVSSRV 54 >gi|17232453|ref|NP_489001.1| DNA repair protein [Nostoc sp. PCC 7120] gi|17134099|dbj|BAB76660.1| DNA repair protein [Nostoc sp. PCC 7120] Length = 582 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +++F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LLCLRIENF-ALIDQLELDFGAGLNVLTGETGAGKSIILDAIDAVLGGKVSSRV 54 >gi|15639615|ref|NP_219065.1| exonuclease (sbcC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025853|ref|YP_001933625.1| exonuclease [Treponema pallidum subsp. pallidum SS14] gi|17433204|sp|O83635|SBCC_TREPA RecName: Full=Nuclease sbcCD subunit C gi|3322922|gb|AAC65599.1| exonuclease (sbcC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018428|gb|ACD71046.1| exonuclease [Treponema pallidum subsp. pallidum SS14] gi|291059997|gb|ADD72732.1| nuclease sbcCD subunit C [Treponema pallidum subsp. pallidum str. Chicago] Length = 1047 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYG 76 K + + + + F ++F + +V G+ G GK++L +AI + YG Sbjct: 1 MKPMRLTLHNIGPFVGTHTVDFTALGPIFLVCGKTGSGKTTLFDAIAYALYG 52 >gi|163941360|ref|YP_001646244.1| SMC domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163863557|gb|ABY44616.1| SMC domain protein [Bacillus weihenstephanensis KBAB4] Length = 709 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEA 69 +L YY ++ + IEI +F+ KI+F ++ G+NG GKSS+ +A Sbjct: 293 ALEKYYGKQRF--IEKIEIYNFKSIR-NMKIDFTLSKSSNAPWLMLLGENGVGKSSILQA 349 Query: 70 IEWLFYGYTQRRK 82 I G QR+K Sbjct: 350 IALTLMGNEQRQK 362 >gi|87302443|ref|ZP_01085260.1| putative exonuclease SbcC [Synechococcus sp. WH 5701] gi|87282787|gb|EAQ74744.1| putative exonuclease SbcC [Synechococcus sp. WH 5701] Length = 1002 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F + E +I F + L +++G G GK+ L +A+ + YG Sbjct: 1 MKPHLLRIEAFGPYAEPVEIGFDVLSQEGLFLIHGSTGAGKTFLLDALCFALYGE----V 56 Query: 83 HGD-SIKKRSIKTPMPMCMAVPRCKYQL 109 GD S+K P AVPR + Sbjct: 57 SGDRSVKALKSDHAEP--AAVPRVSLEF 82 >gi|146291266|ref|YP_001181690.1| AAA ATPase [Shewanella putrefaciens CN-32] gi|145562956|gb|ABP73891.1| AAA ATPase [Shewanella putrefaciens CN-32] Length = 544 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 23 RKLIFKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ ++L + + + +G + E +T + G NG GKS+L A+ + + Sbjct: 17 KRFNYRLNKLHVKNLKGIKDFTLNFEKDKLVTGIVGINGSGKSTLIHALA-CAFKPIGKA 75 Query: 82 KHGDSIKKRSIKTP 95 D + TP Sbjct: 76 TSKDFNRLSHFFTP 89 >gi|194335185|ref|YP_002016979.1| DNA replication and repair protein RecF [Pelodictyon phaeoclathratiforme BU-1] gi|194307662|gb|ACF42362.1| DNA replication and repair protein RecF [Pelodictyon phaeoclathratiforme BU-1] Length = 369 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL I +FR + E + ++I+ G N GK+S+ E + + Sbjct: 1 MKLQCIHYENFRNHR-LLNFEPSYGISILYGPNASGKTSILEGVHYC 46 >gi|330988574|gb|EGH86677.1| ATP binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 429 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|330964984|gb|EGH65244.1| ATP binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 451 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|330961760|gb|EGH62020.1| ATP binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 451 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|330892447|gb|EGH25108.1| ATP binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 429 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|330887833|gb|EGH20494.1| ATP binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 416 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|330881573|gb|EGH15722.1| ATP binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 451 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|332290358|ref|YP_004421210.1| recombination and repair protein [Gallibacterium anatis UMN179] gi|330433254|gb|AEC18313.1| recombination and repair protein [Gallibacterium anatis UMN179] Length = 558 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F ++FA ++++ G+ G GKS +A+E + Sbjct: 2 LTQLRINNF-AIVNRLTLDFAQGMSVITGETGAGKSIALDALEVCLGQRAESGM 54 >gi|320325720|gb|EFW81781.1| ATP binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327361|gb|EFW83375.1| ATP binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 451 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + ++R F E + I+F HLTI+ NG GK+++ +A Sbjct: 1 MQNYRCFGEFE-IDFDPHLTILIASNGGGKTTILDAARVAL 40 >gi|307565627|ref|ZP_07628105.1| DNA replication and repair protein RecF [Prevotella amnii CRIS 21A-A] gi|307345659|gb|EFN91018.1| DNA replication and repair protein RecF [Prevotella amnii CRIS 21A-A] Length = 368 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + +E + L G NG GK++L +AI +L + + Sbjct: 1 MRLDKLSIINYKNI-QTATLELSPKLNCFIGHNGEGKTNLLDAIYYLSFCKSAFNPKDSE 59 Query: 87 IKKRS 91 + + Sbjct: 60 VIQHG 64 >gi|295101094|emb|CBK98639.1| SMC proteins Flexible Hinge Domain [Faecalibacterium prausnitzii L2-6] Length = 1127 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 KL I + ++ F+ + IE ++ + G+NG GKS++ +A++ + G T R + Sbjct: 3 KLKKILLINWLYFS-KELIEVG-NINFLTGKNGAGKSTVIDALQVVLLGETNSRNFNQAA 60 Query: 88 KKRSIKT 94 ++S +T Sbjct: 61 NEKSQRT 67 >gi|256394643|ref|YP_003116207.1| hypothetical protein Caci_5507 [Catenulispora acidiphila DSM 44928] gi|256360869|gb|ACU74366.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length = 1160 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L +++ + FT+ ++F+ + +V G N GKS++ A+ L YG R +G Sbjct: 1 MRLDRLDLVKYGRFTD-HVLDFSAPGVHLVVGPNEAGKSTMRNAVTDLLYGIPARTTYG 58 >gi|294010882|ref|YP_003544342.1| DNA replication and repair protein RecF [Sphingobium japonicum UT26S] gi|292674212|dbj|BAI95730.1| DNA replication and repair protein RecF [Sphingobium japonicum UT26S] Length = 356 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +S FR + + ++ G NG GK+++ EA+ L G R G +++ Sbjct: 2 IGRLTLSDFRNHADALIMP-DHSFIVLTGDNGAGKTNILEAVSMLAPG---RGLRGAALR 57 Query: 89 KRSIK 93 + + Sbjct: 58 DMARQ 62 >gi|253988754|ref|YP_003040110.1| recombination and repair protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637921|emb|CAR66549.1| dna repair protein recn (recombination protein n) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780204|emb|CAQ83365.1| dna repair protein recn (recombination protein n) [Photorhabdus asymbiotica] Length = 553 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ IEF +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IEFRPGMTAITGETGAGKSIAIDALGLCLGNRGETNM 54 >gi|158522527|ref|YP_001530397.1| DNA repair protein RecN [Desulfococcus oleovorans Hxd3] gi|158511353|gb|ABW68320.1| DNA repair protein RecN [Desulfococcus oleovorans Hxd3] Length = 572 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++ I +F + +I F LTI++G+ G GKS + A+ L R Sbjct: 2 LNELAIKNF-AIIDDLRIRFDRGLTILSGETGAGKSIIINAVNLLLGSRATARL 54 >gi|23099705|ref|NP_693171.1| exonuclease [Oceanobacillus iheyensis HTE831] gi|22777935|dbj|BAC14206.1| exonuclease [Oceanobacillus iheyensis HTE831] Length = 1029 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L ++++ F + + + I+F L ++G G GK+++ + I + YG Sbjct: 1 MRPLYLKLTAFGPYKDTEIIDFTKLGDVQLFSISGNTGAGKTTIFDGIAFALYGRASGSD 60 Query: 83 HGDS 86 D+ Sbjct: 61 REDN 64 >gi|25027822|ref|NP_737876.1| hypothetical protein CE1266 [Corynebacterium efficiens YS-314] gi|259506212|ref|ZP_05749114.1| ATPase involved in DNA repair [Corynebacterium efficiens YS-314] gi|23493105|dbj|BAC18076.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166189|gb|EEW50743.1| ATPase involved in DNA repair [Corynebacterium efficiens YS-314] Length = 878 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHG 84 ++ I I +FR ++ + + + +++G N GKSS+ EAI+ + +T R K Sbjct: 1 MRIHAITIDNFRAIEHLELKDIPESGVIVIHGDNEKGKSSILEAIQIVLTEKHTARNKVT 60 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQL 109 +K P+ + + V Y++ Sbjct: 61 KPVKPVDRDVPVRIRLEVSVGPYRM 85 >gi|119774248|ref|YP_926988.1| ATP-dependent OLD family endonuclease [Shewanella amazonensis SB2B] gi|119766748|gb|ABL99318.1| ATP-dependent endonuclease of the OLD family [Shewanella amazonensis SB2B] Length = 603 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 +L I+IS+FR I +IEF + T + G N GKS++ AI Sbjct: 3 MELSKIKISNFRS---IDRIEFTLRNYTSLIGPNNAGKSTVLSAI 44 >gi|330959354|gb|EGH59614.1| exonuclease SbcC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1195 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|325126071|gb|ADY85401.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 562 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEL 54 >gi|321469411|gb|EFX80391.1| putative SMC6, structural maintenance of chromosome protein 6, copy A [Daphnia pulex] Length = 967 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +F + K+EF + + G+NG GKS++ I G S+K Sbjct: 2 LKLIVLENFLCH-DHLKVEFNKKINFIIGKNGSGKSAILTGIVVALGERASSTCRGQSLK 60 >gi|317498008|ref|ZP_07956312.1| hypothetical protein HMPREF0996_01293 [Lachnospiraceae bacterium 5_1_63FAA] gi|316894684|gb|EFV16862.1| hypothetical protein HMPREF0996_01293 [Lachnospiraceae bacterium 5_1_63FAA] Length = 640 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + + + + F D + G +G GKS++ +A++ + Y T R Sbjct: 11 LSKICLNNWH-YIDQKILSFNDGINFFTGHSGSGKSTVIDAMQIVLYANTDGRG 63 >gi|237800417|ref|ZP_04588878.1| exonuclease SbcC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023276|gb|EGI03333.1| exonuclease SbcC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 1215 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + L + G G GKS+L +A+ +G R Sbjct: 1 MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 >gi|254511198|ref|ZP_05123265.1| DNA replication and repair protein RecF [Rhodobacteraceae bacterium KLH11] gi|221534909|gb|EEE37897.1| DNA replication and repair protein RecF [Rhodobacteraceae bacterium KLH11] Length = 365 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ +SHFR + + ++G NG GK+++ EA+ G RR + Sbjct: 5 LTELTVSHFRSHKLARLFLDGRPV-ALHGPNGAGKTNILEAVSLFSPGRGIRRASAAEMT 63 Query: 89 KR 90 +R Sbjct: 64 RR 65 >gi|169825883|ref|YP_001696041.1| nuclease sbcCD subunit C [Lysinibacillus sphaericus C3-41] gi|168990371|gb|ACA37911.1| Nuclease sbcCD subunit C [Lysinibacillus sphaericus C3-41] Length = 1026 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + I+ F + + I+F L ++G+ G GK+++ +AI + YG Sbjct: 1 MKPLKLTITAFGPYKNTEIIDFQQLGEHRLFAISGKTGAGKTTIFDAICYALYGAGSGED 60 Query: 83 HGDSIKKRS 91 D+ RS Sbjct: 61 RQDTALLRS 69 >gi|116514369|ref|YP_813275.1| DNA repair ATPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093684|gb|ABJ58837.1| DNA replication and repair protein RecN [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 562 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEL 54 >gi|104774284|ref|YP_619264.1| RecN, ATPase involved in DNA repair [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423365|emb|CAI98221.1| RecN, ATPase involved in DNA repair [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 562 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEL 54 >gi|91772241|ref|YP_564933.1| hypothetical protein Mbur_0172 [Methanococcoides burtonii DSM 6242] gi|91711256|gb|ABE51183.1| Hypothetical protein Mbur_0172 [Methanococcoides burtonii DSM 6242] Length = 527 Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + +F+G + +KI+ LT++ G N GKSS+ +++ Sbjct: 2 IKQLHLENFKGLKDSKKIDLKP-LTLLCGSNSSGKSSIIQSL 42 >gi|325121226|gb|ADY80749.1| ATP-dependent dsDNA exonuclease [Acinetobacter calcoaceticus PHEA-2] Length = 1198 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + ++ I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLSDEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|299771276|ref|YP_003733302.1| Exonuclease sbcC [Acinetobacter sp. DR1] gi|298701364|gb|ADI91929.1| Exonuclease sbcC [Acinetobacter sp. DR1] Length = 1198 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + ++ I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLSDEHFIDFESSPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|293609001|ref|ZP_06691304.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829574|gb|EFF87936.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 1198 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + ++ I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLSDEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|262280013|ref|ZP_06057798.1| exonuclease sbcC [Acinetobacter calcoaceticus RUH2202] gi|262260364|gb|EEY79097.1| exonuclease sbcC [Acinetobacter calcoaceticus RUH2202] Length = 1198 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I I + ++ I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRIKNLASLSDEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|257456817|ref|ZP_05622001.1| DNA replication and repair protein RecF [Treponema vincentii ATCC 35580] gi|257445823|gb|EEV20882.1| DNA replication and repair protein RecF [Treponema vincentii ATCC 35580] Length = 358 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I +FR E + I+ + + GQNG GK++L EA+ YG + R ++ Sbjct: 1 MPFLSISPYNFRNL-ENKAIDLSAPEVFLVGQNGQGKTNLLEALYLASYGNSFRTRNEAE 59 Query: 87 IKKRS 91 I K++ Sbjct: 60 IYKKN 64 >gi|189210339|ref|XP_001941501.1| condensin subunit [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977594|gb|EDU44220.1| condensin subunit [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1350 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 35 SHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 ++ + I + + + G NG GKS++ ++I ++ +++ K Sbjct: 181 EGYKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGINNLSVVRAQNLQDLIYK 240 >gi|85374625|ref|YP_458687.1| recombination protein F [Erythrobacter litoralis HTCC2594] gi|84787708|gb|ABC63890.1| recombinational DNA repair ATPase [Erythrobacter litoralis HTCC2594] Length = 361 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L I +S+ R E +++ ++ G+NG GK+++ EAI L G RR Sbjct: 1 MALDRITLSNLRNHAE-TRLQGTARFNLLVGENGAGKTNVLEAISLLAPGRGLRR 54 >gi|330838255|ref|YP_004412835.1| SMC domain protein [Selenomonas sputigena ATCC 35185] gi|329746019|gb|AEB99375.1| SMC domain protein [Selenomonas sputigena ATCC 35185] Length = 361 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F+L +++ F+ E +IEF L ++ G NG GK++L ++ L + R Sbjct: 4 FQLTRLKVLGFKSIQE-TEIEFG-MLNVLIGSNGSGKTNLI-SLFSLLQAMIEGRLQSYV 60 Query: 87 IKKRSIKT 94 KK T Sbjct: 61 AKKGGPDT 68 >gi|326423698|ref|NP_759379.2| putative ATP-dependent endonuclease of the OLD family [Vibrio vulnificus CMCP6] gi|319999055|gb|AAO08906.2| predicted ATP-dependent endonuclease of the OLD family [Vibrio vulnificus CMCP6] Length = 568 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 KL IE+ +FR +I IE + +++ G+N GK++L A+ +FY + Sbjct: 1 MKLKKIEVHNFRSIKDIA-IEV-NPYSLIVGENNSGKTNLLSALR-VFYEES 49 >gi|293377373|ref|ZP_06623577.1| DNA repair protein RecN [Enterococcus faecium PC4.1] gi|292644065|gb|EFF62171.1| DNA repair protein RecN [Enterococcus faecium PC4.1] Length = 560 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCILEGLFELPK 72 >gi|293571742|ref|ZP_06682761.1| DNA repair protein RecN [Enterococcus faecium E980] gi|291608199|gb|EFF37502.1| DNA repair protein RecN [Enterococcus faecium E980] Length = 560 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCILEGLFELPK 72 >gi|260888432|ref|ZP_05899695.1| putative RecF/RecN/SMC N domain protein [Selenomonas sputigena ATCC 35185] gi|260861968|gb|EEX76468.1| putative RecF/RecN/SMC N domain protein [Selenomonas sputigena ATCC 35185] Length = 367 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F+L +++ F+ E +IEF L ++ G NG GK++L ++ L + R Sbjct: 10 FQLTRLKVLGFKSIQE-TEIEFG-MLNVLIGSNGSGKTNLI-SLFSLLQAMIEGRLQSYV 66 Query: 87 IKKRSIKT 94 KK T Sbjct: 67 AKKGGPDT 74 >gi|227550449|ref|ZP_03980498.1| DNA repair protein RecN [Enterococcus faecium TX1330] gi|227180350|gb|EEI61322.1| DNA repair protein RecN [Enterococcus faecium TX1330] Length = 560 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +I I++F ++ F + +T + G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEISITNF-AIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + + K + +P+ Sbjct: 57 QGAEKCILEGLFELPK 72 >gi|83950950|ref|ZP_00959683.1| hypothetical protein ISM_07610 [Roseovarius nubinhibens ISM] gi|83838849|gb|EAP78145.1| hypothetical protein ISM_07610 [Roseovarius nubinhibens ISM] Length = 798 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHL--TIVNGQNGYGKSSLSEAIEWLF 74 K+ I +S FRG + ++F+ + G+N GKS++++A+EW Sbjct: 3 KIRKITVSRFRGARFVLPLDFSKSTKSVAIFGENASGKSTITDALEWFI 51 >gi|328541627|ref|YP_004301736.1| DNA replication and repair protein recF [polymorphum gilvum SL003B-26A1] gi|326411379|gb|ADZ68442.1| DNA replication and repair protein recF [Polymorphum gilvum SL003B-26A1] Length = 377 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ + + ++ FR ++ + +E + L + G NG GK+++ EAI L G RR Sbjct: 2 SSRVSVAIERLTLTDFRNYSLLV-LEPSAPLVALVGDNGAGKTNILEAISLLTAGRGLRR 60 >gi|323703800|ref|ZP_08115437.1| SMC domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531215|gb|EGB21117.1| SMC domain protein [Desulfotomaculum nigrificans DSM 574] Length = 982 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 27 FKLLDIEISHFRGFT-----EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I + + + + + I+ + + G+NG GKS+L EAI + + Sbjct: 1 MWIAQIRLKNIKSYGAGPDGDGIYIQLEPGVNQIAGKNGVGKSTLIEAIGYALF 54 >gi|217968516|ref|YP_002353750.1| SMC domain protein [Thauera sp. MZ1T] gi|217505843|gb|ACK52854.1| SMC domain protein [Thauera sp. MZ1T] Length = 397 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I + +F+ F + + +V G NG GKS+L + +L Sbjct: 1 MKIESIRLKNFKAFRNVHLKDI-PSFLVVVGANGSGKSTLFDVFGFL 46 >gi|15237219|ref|NP_197096.1| structural maintenance of chromosomes (SMC) family protein (MSS2) [Arabidopsis thaliana] gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis thaliana] gi|332004841|gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] Length = 1053 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F F + L +V G NG GKSSL AI G Q S+ Sbjct: 23 IIEIELHNFMTFNHLVCKP-GSRLNLVIGPNGSGKSSLVCAIALCLGGEPQLLGRATSV 80 >gi|309362928|emb|CAR99125.1| hypothetical protein CBG_28106 [Caenorhabditis briggsae AF16] Length = 277 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ I +F + F + +V G NG GK++L +A+ + Sbjct: 5 VRISSIRTENFPRGNRPLNVGFGTNFAVVRGDNGSGKTTLIKAVAFA 51 >gi|295135054|ref|YP_003585730.1| P-loop containing nucleoside triphosphate hydrolase [Zunongwangia profunda SM-A87] gi|294983069|gb|ADF53534.1| P-loop containing nucleoside triphosphate hydrolase [Zunongwangia profunda SM-A87] Length = 643 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + I +FRG + +EF + I+ G+NG KS++ +AI Sbjct: 1 MYLAKLTIENFRGI-KKMILEFQKRINILIGENGSNKSAVIDAIR 44 >gi|198275221|ref|ZP_03207752.1| hypothetical protein BACPLE_01380 [Bacteroides plebeius DSM 17135] gi|198271804|gb|EDY96074.1| hypothetical protein BACPLE_01380 [Bacteroides plebeius DSM 17135] Length = 340 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAI 70 + IEI F+ F I+ D + + G+NG GKSSL A+ Sbjct: 4 ITKIEIDGFKAFPNNFSIDLLDGKNLLIYGENGSGKSSLYYAL 46 >gi|327535911|gb|AEA94745.1| exonuclease SbcC [Enterococcus faecalis OG1RF] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315174972|gb|EFU18989.1| exonuclease SbcC [Enterococcus faecalis TX1346] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315170382|gb|EFU14399.1| exonuclease SbcC [Enterococcus faecalis TX1342] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315168676|gb|EFU12693.1| exonuclease SbcC [Enterococcus faecalis TX1341] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315165357|gb|EFU09374.1| exonuclease SbcC [Enterococcus faecalis TX1302] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315162048|gb|EFU06065.1| exonuclease SbcC [Enterococcus faecalis TX0645] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315149933|gb|EFT93949.1| exonuclease SbcC [Enterococcus faecalis TX0012] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|315148656|gb|EFT92672.1| exonuclease SbcC [Enterococcus faecalis TX4244] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|312900056|ref|ZP_07759373.1| exonuclease SbcC [Enterococcus faecalis TX0470] gi|311292813|gb|EFQ71369.1| exonuclease SbcC [Enterococcus faecalis TX0470] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|312953716|ref|ZP_07772551.1| exonuclease SbcC [Enterococcus faecalis TX0102] gi|310628363|gb|EFQ11646.1| exonuclease SbcC [Enterococcus faecalis TX0102] gi|315151815|gb|EFT95831.1| exonuclease SbcC [Enterococcus faecalis TX0031] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|307278759|ref|ZP_07559825.1| exonuclease SbcC [Enterococcus faecalis TX0860] gi|306504565|gb|EFM73769.1| exonuclease SbcC [Enterococcus faecalis TX0860] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|307288689|ref|ZP_07568669.1| exonuclease SbcC [Enterococcus faecalis TX0109] gi|306500355|gb|EFM69692.1| exonuclease SbcC [Enterococcus faecalis TX0109] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|295113641|emb|CBL32278.1| ATPase involved in DNA repair [Enterococcus sp. 7L76] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257421692|ref|ZP_05598682.1| exonuclease sbcC [Enterococcus faecalis X98] gi|257163516|gb|EEU93476.1| exonuclease sbcC [Enterococcus faecalis X98] gi|315155558|gb|EFT99574.1| exonuclease SbcC [Enterococcus faecalis TX0043] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257420086|ref|ZP_05597080.1| predicted protein [Enterococcus faecalis T11] gi|257161914|gb|EEU91874.1| predicted protein [Enterococcus faecalis T11] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSFFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257416864|ref|ZP_05593858.1| exonuclease SbcC [Enterococcus faecalis AR01/DG] gi|257158692|gb|EEU88652.1| exonuclease SbcC [Enterococcus faecalis ARO1/DG] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257090880|ref|ZP_05585241.1| predicted protein [Enterococcus faecalis CH188] gi|312902517|ref|ZP_07761723.1| exonuclease SbcC [Enterococcus faecalis TX0635] gi|256999692|gb|EEU86212.1| predicted protein [Enterococcus faecalis CH188] gi|310634187|gb|EFQ17470.1| exonuclease SbcC [Enterococcus faecalis TX0635] gi|315579674|gb|EFU91865.1| exonuclease SbcC [Enterococcus faecalis TX0630] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257084339|ref|ZP_05578700.1| exonuclease SbcC [Enterococcus faecalis Fly1] gi|256992369|gb|EEU79671.1| exonuclease SbcC [Enterococcus faecalis Fly1] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257081743|ref|ZP_05576104.1| exonuclease SbcC [Enterococcus faecalis E1Sol] gi|256989773|gb|EEU77075.1| exonuclease SbcC [Enterococcus faecalis E1Sol] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|257079858|ref|ZP_05574219.1| exonuclease SbcC [Enterococcus faecalis JH1] gi|294780416|ref|ZP_06745782.1| exonuclease SbcCD, C subunit [Enterococcus faecalis PC1.1] gi|307269626|ref|ZP_07550962.1| exonuclease SbcC [Enterococcus faecalis TX4248] gi|256987888|gb|EEU75190.1| exonuclease SbcC [Enterococcus faecalis JH1] gi|294452516|gb|EFG20952.1| exonuclease SbcCD, C subunit [Enterococcus faecalis PC1.1] gi|306514043|gb|EFM82628.1| exonuclease SbcC [Enterococcus faecalis TX4248] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|256963799|ref|ZP_05567970.1| exonuclease SbcC [Enterococcus faecalis HIP11704] gi|307271746|ref|ZP_07553017.1| exonuclease SbcC [Enterococcus faecalis TX0855] gi|256954295|gb|EEU70927.1| exonuclease SbcC [Enterococcus faecalis HIP11704] gi|306511624|gb|EFM80623.1| exonuclease SbcC [Enterococcus faecalis TX0855] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|256961059|ref|ZP_05565230.1| exonuclease SbcC [Enterococcus faecalis Merz96] gi|293384551|ref|ZP_06630417.1| exonuclease SbcC [Enterococcus faecalis R712] gi|293386780|ref|ZP_06631351.1| exonuclease SbcC [Enterococcus faecalis S613] gi|312906377|ref|ZP_07765385.1| exonuclease SbcC [Enterococcus faecalis DAPTO 512] gi|312979464|ref|ZP_07791152.1| exonuclease SbcC [Enterococcus faecalis DAPTO 516] gi|256951555|gb|EEU68187.1| exonuclease SbcC [Enterococcus faecalis Merz96] gi|291078097|gb|EFE15461.1| exonuclease SbcC [Enterococcus faecalis R712] gi|291083783|gb|EFE20746.1| exonuclease SbcC [Enterococcus faecalis S613] gi|310627531|gb|EFQ10814.1| exonuclease SbcC [Enterococcus faecalis DAPTO 512] gi|311287835|gb|EFQ66391.1| exonuclease SbcC [Enterococcus faecalis DAPTO 516] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|256957921|ref|ZP_05562092.1| exonuclease SbcC [Enterococcus faecalis DS5] gi|300860733|ref|ZP_07106820.1| exonuclease SbcCD, C subunit [Enterococcus faecalis TUSoD Ef11] gi|256948417|gb|EEU65049.1| exonuclease SbcC [Enterococcus faecalis DS5] gi|300849772|gb|EFK77522.1| exonuclease SbcCD, C subunit [Enterococcus faecalis TUSoD Ef11] gi|315035197|gb|EFT47129.1| exonuclease SbcC [Enterococcus faecalis TX0027] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|229549190|ref|ZP_04437915.1| exonuclease SbcC [Enterococcus faecalis ATCC 29200] gi|229305427|gb|EEN71423.1| exonuclease SbcC [Enterococcus faecalis ATCC 29200] gi|315159333|gb|EFU03350.1| exonuclease SbcC [Enterococcus faecalis TX0312] gi|323481617|gb|ADX81056.1| exonuclease SbcC [Enterococcus faecalis 62] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|227554180|ref|ZP_03984227.1| exonuclease SbcC [Enterococcus faecalis HH22] gi|227176679|gb|EEI57651.1| exonuclease SbcC [Enterococcus faecalis HH22] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|227519519|ref|ZP_03949568.1| exonuclease SbcC [Enterococcus faecalis TX0104] gi|227073044|gb|EEI11007.1| exonuclease SbcC [Enterococcus faecalis TX0104] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|169608676|ref|XP_001797757.1| hypothetical protein SNOG_07424 [Phaeosphaeria nodorum SN15] gi|111063770|gb|EAT84890.1| hypothetical protein SNOG_07424 [Phaeosphaeria nodorum SN15] Length = 1124 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 L+ +++ +F +T + L ++ G NG GKS+L AI ++ G Sbjct: 73 LVRVKLKNFVTYTAAE-FHLGPSLNMIIGPNGTGKSTLVCAICLGLGWSSEHLGRAKELG 131 Query: 85 DSIKKRSIKTPMPMCMA 101 +K S + + + +A Sbjct: 132 HFVKNGSDEAMIEIELA 148 >gi|29377169|ref|NP_816323.1| exonuclease SbcC [Enterococcus faecalis V583] gi|29344635|gb|AAO82393.1| exonuclease SbcC [Enterococcus faecalis V583] gi|315573811|gb|EFU86002.1| exonuclease SbcC [Enterococcus faecalis TX0309B] gi|315580247|gb|EFU92438.1| exonuclease SbcC [Enterococcus faecalis TX0309A] Length = 1045 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|28211107|ref|NP_782051.1| transporter [Clostridium tetani E88] gi|28203547|gb|AAO35988.1| transporter [Clostridium tetani E88] Length = 249 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 19/27 (70%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAI 70 KIEF +T + G+NG GKS++ EAI Sbjct: 42 SKIEFHPKVTYIVGENGTGKSTILEAI 68 >gi|163849398|ref|YP_001637442.1| DNA replication and repair protein RecF [Chloroflexus aurantiacus J-10-fl] gi|222527396|ref|YP_002571867.1| DNA replication and repair protein RecF [Chloroflexus sp. Y-400-fl] gi|189039618|sp|A9WDD4|RECF_CHLAA RecName: Full=DNA replication and repair protein recF gi|254790468|sp|B9LH68|RECF_CHLSY RecName: Full=DNA replication and repair protein recF gi|163670687|gb|ABY37053.1| DNA replication and repair protein RecF [Chloroflexus aurantiacus J-10-fl] gi|222451275|gb|ACM55541.1| DNA replication and repair protein RecF [Chloroflexus sp. Y-400-fl] Length = 392 Score = 41.1 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + FR + + A T+ G N GK+SL EAI +L + R Sbjct: 1 MYVHHLFLRDFRNYR-RLDLALAPATTLFYGPNAAGKTSLLEAIFYLATTRSPR 53 >gi|332294864|ref|YP_004436787.1| DNA replication and repair protein recF [Thermodesulfobium narugense DSM 14796] gi|332177967|gb|AEE13656.1| DNA replication and repair protein recF [Thermodesulfobium narugense DSM 14796] Length = 323 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +EI HFR F E + ++ G+N GK++L EAI G T+ ++ + S Sbjct: 3 LEIHHFRNF-EHNTFNLSKK-NLIIGENASGKTNLLEAIYLTLRGKTKNNIPNQNLIQFS 60 Query: 92 IKT 94 ++ Sbjct: 61 RES 63 >gi|314933693|ref|ZP_07841058.1| DNA repair protein RecN [Staphylococcus caprae C87] gi|313653843|gb|EFS17600.1| DNA repair protein RecN [Staphylococcus caprae C87] Length = 558 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDKLEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|298492160|ref|YP_003722337.1| DNA repair protein RecN ['Nostoc azollae' 0708] gi|298234078|gb|ADI65214.1| DNA repair protein RecN ['Nostoc azollae' 0708] Length = 575 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + +++F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LLCLRIENF-ALIDQLELDFGAGLNVLTGETGAGKSIILDAIDGVLGGKVSSRV 54 >gi|223043092|ref|ZP_03613139.1| DNA repair protein RecN [Staphylococcus capitis SK14] gi|222443303|gb|EEE49401.1| DNA repair protein RecN [Staphylococcus capitis SK14] Length = 558 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDKLEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|326436528|gb|EGD82098.1| hypothetical protein PTSG_02778 [Salpingoeca sp. ATCC 50818] Length = 1157 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +F ++ I+FAD++ +NG NG GKS++ A+ G + Sbjct: 109 VKALHLVNFMCHRMLE-IKFADNINFINGVNGSGKSAILSALVLGLGAQPTNTGRGST 165 >gi|320197272|gb|EFW71888.1| hypothetical protein EcoM_00468 [Escherichia coli WV_060327] Length = 566 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + I FR + + I F + ++ G N GK++L AI L Sbjct: 1 MRIETVYIKGFRNYCDAV-INFNE-TNLIIGANDVGKTNLLYAIRLLLD 47 >gi|312878419|ref|ZP_07738320.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311794804|gb|EFR11232.1| SMC domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 412 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL ++ + +F+ F EI +E D +V G N GKS+ + ++L Sbjct: 1 MKLKNLSVKNFKSFKEIN-VELKD-FNVVIGANASGKSNFVQVFKFL 45 >gi|262273132|ref|ZP_06050949.1| DNA recombination and repair protein RecF [Grimontia hollisae CIP 101886] gi|262222888|gb|EEY74196.1| DNA recombination and repair protein RecF [Grimontia hollisae CIP 101886] Length = 358 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I R E + + + G NG GK+S+ EA+ +L +G + R Sbjct: 1 MALSRLSIHDLRNI-EACDLSLSSGFNFLVGPNGSGKTSVLEAVYYLGHGRSFRSPLTGR 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHQQD 66 >gi|115738150|ref|XP_792299.2| PREDICTED: similar to structural maintenance of chromosomes protein 6 [Strongylocentrotus purpuratus] gi|115944203|ref|XP_001188071.1| PREDICTED: similar to structural maintenance of chromosomes protein 6 [Strongylocentrotus purpuratus] Length = 502 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F F ++ V G+NG GKS++ AI G +S+K Sbjct: 61 IEKISVKNFMCHG-RLDCNFGPNVNFVVGRNGSGKSAILTAIVVGLGGKAIATSRCNSVK 119 >gi|116179608|ref|XP_001219653.1| hypothetical protein CHGG_00432 [Chaetomium globosum CBS 148.51] gi|88184729|gb|EAQ92197.1| hypothetical protein CHGG_00432 [Chaetomium globosum CBS 148.51] Length = 1053 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +F E L + G+NG GKS++ AI G G S+K Sbjct: 137 IESVTCVNFMCHV-RLHCELGPLLNFIVGENGSGKSAILTAITLCLGGKASSTNRGGSLK 195 >gi|326692484|ref|ZP_08229489.1| hypothetical protein LargK3_01829 [Leuconostoc argentinum KCTC 3773] Length = 787 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++IS F G Q +F L ++ GQN GKS+L I + +G+ ++ Sbjct: 1 MDIQQVDISGF-GRWSKQHFDFQSGLQVILGQNESGKSTLRAFIVGILFGFPSKKGK 56 >gi|157863730|gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum] Length = 1316 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|157863726|gb|ABV90884.1| DNA repair protein Rad50 [Aegilops tauschii] Length = 1316 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|157863718|gb|ABV90880.1| DNA repair protein Rad50 [Aegilops tauschii] Length = 1316 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|42525689|ref|NP_970787.1| nuclease SbcCD, C subunit, putative [Treponema denticola ATCC 35405] gi|41815700|gb|AAS10668.1| nuclease SbcCD, C subunit, putative [Treponema denticola ATCC 35405] Length = 1030 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA--DHLTIVNGQNGYGKSSLSEAIEWLFY 75 K +++++ F I+F+ D + +V G+ G GK+++ +AI + FY Sbjct: 1 MKPEILKLTNIGPFRGTHTIDFSLMDSIFLVCGKTGAGKTTIFDAISYAFY 51 >gi|15604056|ref|NP_220571.1| DNA repair protein RECN (recN) [Rickettsia prowazekii str. Madrid E] gi|11134855|sp|Q9ZDY2|RECN_RICPR RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|3860747|emb|CAA14648.1| DNA REPAIR PROTEIN RECN (recN) [Rickettsia prowazekii] gi|292571777|gb|ADE29692.1| DNA repair protein RecN [Rickettsia prowazekii Rp22] Length = 554 Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF+ L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFSKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|307595687|ref|YP_003902004.1| ABC transporter-like protein [Vulcanisaeta distributa DSM 14429] gi|307550888|gb|ADN50953.1| ABC transporter related protein [Vulcanisaeta distributa DSM 14429] Length = 259 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWL---FYGYTQ---RRKHGDSIKKRSIKTPMPM 98 +EF + T++ G NG GK++L AI + G R G + S + Sbjct: 22 TVEFDEGRTVILGPNGSGKTTLLRAIAGVIKPLRGIIVLDDRPLRGGDVGYVSHAGGLDP 81 Query: 99 CMAV 102 M V Sbjct: 82 NMTV 85 >gi|282856280|ref|ZP_06265561.1| DNA replication and repair protein RecF [Pyramidobacter piscolens W5455] gi|282585857|gb|EFB91144.1| DNA replication and repair protein RecF [Pyramidobacter piscolens W5455] Length = 352 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGD 85 ++ +FR E I + L ++ G NG GK+++ EA+ + G K D Sbjct: 1 MRIAQTRFRNFRNL-ENALIAWEPGLNLLTGANGAGKTNILEALHVVTGWGAFSGSKCSD 59 Query: 86 SIKKRS 91 ++K +S Sbjct: 60 TVKWQS 65 >gi|269836136|ref|YP_003318364.1| hypothetical protein Sthe_0103 [Sphaerobacter thermophilus DSM 20745] gi|269785399|gb|ACZ37542.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 1062 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 24/57 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ I F F +IQ + LT+ G N GK++L I + +G+ Sbjct: 1 MRIAGWHIDGFGVFHDIQVRDVPPGLTVFLGPNEAGKTTLLAFIRQMLFGFPSDAVR 57 >gi|157863728|gb|ABV90885.1| DNA repair protein Rad50 [Triticum turgidum] Length = 1316 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|82703536|ref|YP_413102.1| DNA repair protein RecN [Nitrosospira multiformis ATCC 25196] gi|82411601|gb|ABB75710.1| DNA replication and repair protein RecN [Nitrosospira multiformis ATCC 25196] Length = 563 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 32 IEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ R F + +EFA T++ G+ G GKS L +A+ + + Sbjct: 2 LKFLGIRDFVIVDRIDLEFAPGFTVLTGETGAGKSILIDALSLVLGERSDAS 53 >gi|84496387|ref|ZP_00995241.1| putative exonuclease [Janibacter sp. HTCC2649] gi|84383155|gb|EAP99036.1| putative exonuclease [Janibacter sp. HTCC2649] Length = 1047 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + F F + ++F A L +++G G GK+SL +AI + + Sbjct: 1 MRIHHLTATAFGPFPDEIAVDFDALTAAGLFLIHGPTGAGKTSLLDAICFALF 53 >gi|312883362|ref|ZP_07743088.1| ATP-dependent endonuclease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368978|gb|EFP96504.1| ATP-dependent endonuclease [Vibrio caribbenthicus ATCC BAA-2122] Length = 543 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MKLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|304413653|ref|ZP_07395097.1| recombination and repair protein [Candidatus Regiella insecticola LSR1] gi|304283744|gb|EFL92138.1| recombination and repair protein [Candidatus Regiella insecticola LSR1] Length = 561 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R+ I L + I++F I+F +T + G+ G GKS +A+ R Sbjct: 4 RRFIM-LAQLTINNF-AIVREVAIDFQSGMTAITGETGAGKSIAIDALGLCLGS----RL 57 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 G+ ++ + + + ++ + LK Sbjct: 58 EGNMVRSGATRADICARFSLTDTSFALK 85 >gi|261251175|ref|ZP_05943749.1| ATP-dependent endonuclease [Vibrio orientalis CIP 102891] gi|260938048|gb|EEX94036.1| ATP-dependent endonuclease [Vibrio orientalis CIP 102891] Length = 543 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MKLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|257454959|ref|ZP_05620207.1| exonuclease SbcC [Enhydrobacter aerosaccus SK60] gi|257447669|gb|EEV22664.1| exonuclease SbcC [Enhydrobacter aerosaccus SK60] Length = 1261 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + +I+F + + + G G GKS++ +AI YG T R Sbjct: 1 MRILKLRFQNLNSLQGEWEIDFRHAAYADEGIFAITGSTGAGKSTILDAICLALYGATPR 60 >gi|256087873|ref|XP_002580087.1| structural maintenance of chromosomes smc2 [Schistosoma mansoni] gi|238665593|emb|CAZ36326.1| structural maintenance of chromosomes smc2, putative [Schistosoma mansoni] Length = 1162 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 43 IQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 +I+ F + G NG GKS++ +AI +L ++ + K Sbjct: 13 ETEIDGFDPQFNAITGLNGSGKSNILDAICFLLGITNLSHVRAANLHELVYK 64 >gi|228861369|ref|YP_002854390.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB14] gi|227438385|gb|ACP30698.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB14] Length = 560 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R + + K + + M KY +K Sbjct: 32 TLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIK 91 >gi|229817459|ref|ZP_04447741.1| hypothetical protein BIFANG_02722 [Bifidobacterium angulatum DSM 20098] gi|229785248|gb|EEP21362.1| hypothetical protein BIFANG_02722 [Bifidobacterium angulatum DSM 20098] Length = 1104 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--- 79 KL+ ++ + I+FA H+ +++G+ G GK+++ + I + YG Sbjct: 1 MKLIGLKFQGVGPYKGEFSIDFAALTRSHMFLIDGETGAGKTTILDCITFALYGNISGNT 60 Query: 80 --RRKHGDSIKKRS 91 R GD + RS Sbjct: 61 EGRNGAGDKQRLRS 74 >gi|157863724|gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum] Length = 1316 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|115377261|ref|ZP_01464471.1| RecF/RecN/SMC N terminal domain, putative [Stigmatella aurantiaca DW4/3-1] gi|310817991|ref|YP_003950349.1| RecF like family protein [Stigmatella aurantiaca DW4/3-1] gi|115365737|gb|EAU64762.1| RecF/RecN/SMC N terminal domain, putative [Stigmatella aurantiaca DW4/3-1] gi|309391063|gb|ADO68522.1| RecF like family protein [Stigmatella aurantiaca DW4/3-1] Length = 388 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 25 LIFKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + + + F E + + D L ++ G NG GKS+L AI Sbjct: 1 MAIYIQSLHLQNLLSFGLEAEPVPLGD-LNVIIGPNGSGKSNLIAAI 46 >gi|74095933|ref|NP_001027801.1| structural maintenance of chromosomes protein 5 [Takifugu rubripes] gi|82132695|sp|Q802R9|SMC5_TAKRU RecName: Full=Structural maintenance of chromosomes protein 5; Short=SMC protein 5; Short=SMC-5 gi|28301615|emb|CAD65850.1| SMC5 protein [Takifugu rubripes] Length = 1092 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L I + +F + + ++ +L ++ G NG GKSS+ AI G T GD + Sbjct: 44 ILRITMRNFLTY-DYTEVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGDKV 101 >gi|37520720|ref|NP_924097.1| hypothetical protein glr1151 [Gloeobacter violaceus PCC 7421] gi|35211715|dbj|BAC89092.1| glr1151 [Gloeobacter violaceus PCC 7421] Length = 391 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 29 LLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + + F + +E D L I+ G NG GKS+ EAIE Sbjct: 4 IESLRLDGLLSFAPDSPAVELTD-LNIIIGPNGSGKSNFIEAIE 46 >gi|328950636|ref|YP_004367971.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] gi|328450960|gb|AEB11861.1| SMC domain protein [Marinithermus hydrothermalis DSM 14884] Length = 485 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + I +R + +I F D ++ G+N GKS++ A++ + Sbjct: 3 RIRKLTIEGYRSIRDPIEIIFPQDQPVVLMGENNAGKSNIVRALQLVLG 51 >gi|327394856|dbj|BAK12278.1| DNA repair protein RecN [Pantoea ananatis AJ13355] Length = 553 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E+ I+F +T + G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELD-IDFQRGMTAITGETGAGKSIAIDALGLCLGG 48 >gi|312794482|ref|YP_004027405.1| SMC domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181622|gb|ADQ41792.1| SMC domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 412 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL ++ + +F+ F EI +E D +V G N GKS+ + ++L Sbjct: 1 MKLKNLSVKNFKSFKEIN-VELKD-FNVVIGANASGKSNFVQVFKFL 45 >gi|291618460|ref|YP_003521202.1| RecN [Pantoea ananatis LMG 20103] gi|291153490|gb|ADD78074.1| RecN [Pantoea ananatis LMG 20103] Length = 561 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E+ I+F +T + G+ G GKS +A+ G Sbjct: 10 LAQLTISNFAIVRELD-IDFQRGMTAITGETGAGKSIAIDALGLCLGG 56 >gi|291296472|ref|YP_003507870.1| DNA repair protein RecN [Meiothermus ruber DSM 1279] gi|290471431|gb|ADD28850.1| DNA repair protein RecN [Meiothermus ruber DSM 1279] Length = 523 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +E+ + E ++F+ LT++ G+ G GKS L +A+ L + Sbjct: 2 LERLEVQNL-AVLEQVALDFSPGLTVLTGETGAGKSVLVDALSLLLGEKAEGLVR 55 >gi|166366417|ref|YP_001658690.1| hypothetical protein MAE_36760 [Microcystis aeruginosa NIES-843] gi|166088790|dbj|BAG03498.1| hypothetical protein MAE_36760 [Microcystis aeruginosa NIES-843] Length = 661 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + +F + Q I + ++ G NG GK++L +AI YG + Sbjct: 4 TELVLQNFGPYAGRQVINLRPEKDNNPCPIILLGGMNGGGKTTLMDAIRLALYGARAK 61 >gi|159027115|emb|CAO86746.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 661 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + +F + Q I + ++ G NG GK++L +AI YG + Sbjct: 4 TELVLQNFGPYAGRQVINLRPEKDNNPCPIILLGGMNGGGKTTLMDAIRLALYGARAK 61 >gi|116049086|ref|YP_792112.1| hypothetical protein PA14_49480 [Pseudomonas aeruginosa UCBPP-PA14] gi|115584307|gb|ABJ10322.1| hypothetical protein PA14_49480 [Pseudomonas aeruginosa UCBPP-PA14] Length = 595 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGD 85 ++ + + F+ + + + I L++ G N GK+++ +A W F + G Sbjct: 1 MQITKLTLHRFKKYRDKE-ISIKPGLSLFAGPNNAGKTTILQAFAVWEFCKTVLEMEKGS 59 Query: 86 SIKKRSI 92 + ++ Sbjct: 60 ASIRQGY 66 >gi|94314407|ref|YP_587616.1| putative nucleoside triphosphate hydrolase domain-containing protein [Cupriavidus metallidurans CH34] gi|93358259|gb|ABF12347.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 598 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I IS+FR F ++I+ A D +V G+N GKS+L A+ + Sbjct: 1 MKLKRIYISNFRNF---EQIDVALDGSVVVVGENRVGKSNLLFALRLILD 47 >gi|91214792|ref|ZP_01251765.1| ATP-dependent exonuclease SbcC [Psychroflexus torquis ATCC 700755] gi|91187219|gb|EAS73589.1| ATP-dependent exonuclease SbcC [Psychroflexus torquis ATCC 700755] Length = 1007 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + K+ F + L + G G GKSSL +AI YG T R Sbjct: 1 MKIESLSFKNINSLKGEHKVHFDESPLNSGGLFAIIGPTGSGKSSLLDAICLGLYGRTPR 60 >gi|78211946|ref|YP_380725.1| DNA replication and repair protein RecF [Synechococcus sp. CC9605] gi|97181068|sp|Q3AML2|RECF_SYNSC RecName: Full=DNA replication and repair protein recF gi|78196405|gb|ABB34170.1| DNA replication and repair protein RecF [Synechococcus sp. CC9605] Length = 364 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + FR T +Q +E +V G NG GKS+L EA+E L + R + + Sbjct: 1 MQGFRNHTVLQ-LELTQPRLLVIGPNGIGKSNLLEAVELLGSLRSHRCSNDRDLI--QWD 57 Query: 94 TPMPMCMA 101 TP + A Sbjct: 58 TPQALIRA 65 >gi|9632641|ref|NP_049669.1| gp46 recombination endonuclease subunit [Enterobacteria phage T4] gi|119682|sp|P04522|EXO2_BPT4 RecName: Full=Exonuclease subunit 2; AltName: Full=Protein Gp46 gi|5354265|gb|AAD42472.1|AF158101_59 gp46 recombination endonuclease subunit [Enterobacteria phage T4] gi|215903|gb|AAC05392.1| exonuclease g46 (gtg start codon) [Enterobacteria phage T4] gi|577852|emb|CAA25945.1| unnamed protein product [Enterobacteria phage T4] gi|299780410|gb|ADJ39772.1| endonuclease subunit [Enterobacteria phage T4T] Length = 560 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R + + K + + M KY +K Sbjct: 32 TLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIK 91 >gi|113476492|ref|YP_722553.1| SMC protein-like [Trichodesmium erythraeum IMS101] gi|110167540|gb|ABG52080.1| SMC protein-like [Trichodesmium erythraeum IMS101] Length = 418 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + +++ F + D LT++ G N GKS++ +A+++L Sbjct: 2 LKQITLENWKSFRHAELY--IDPLTVLIGTNASGKSNVVDALDFL 44 >gi|326781884|ref|YP_004322286.1| recombination endonuclease subunit [Synechococcus phage S-SM2] gi|310003074|gb|ADO97472.1| recombination endonuclease subunit [Synechococcus phage S-SM2] Length = 570 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLT-IVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F ++ F ++ T ++ G NG GKS++ +A+ + +G R+ + Sbjct: 1 MILFETIRWKNFLSTGNQYTEVNFTENKTNLIIGTNGAGKSTVLDALTFSLFGKPFRKIN 60 Query: 84 GDSIKKRSIKT--PMPMCMAVPRCKYQL 109 + + + + +C +V ++++ Sbjct: 61 KPQLINSTNEKDCRVEVCFSVNNTEWKI 88 >gi|309797291|ref|ZP_07691685.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308119038|gb|EFO56300.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 423 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F++ I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFSNDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|283786951|ref|YP_003366816.1| hypothetical protein ROD_33381 [Citrobacter rodentium ICC168] gi|282950405|emb|CBG90054.1| conserved hypothetical protein [Citrobacter rodentium ICC168] Length = 548 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 KL ++ IS F+ I I+F + +T++ G NG GKS++ EA+ Sbjct: 1 MKLDNLWISEFKNLKNIN-IDFDEGELVTVIIGWNGAGKSNVIEAL 45 >gi|258624530|ref|ZP_05719472.1| Predicted ATP-dependent endonuclease of the OLD family [Vibrio mimicus VM603] gi|258583183|gb|EEW07990.1| Predicted ATP-dependent endonuclease of the OLD family [Vibrio mimicus VM603] Length = 543 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + G + Sbjct: 1 MYLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVLPADGTLYQFALQ 58 Query: 85 DSIKKRSIKTPMPMCMAV 102 D SI P + + Sbjct: 59 DFHVDYSIADPQTQNLQI 76 >gi|229115824|ref|ZP_04245225.1| Exonuclease [Bacillus cereus Rock1-3] gi|228667625|gb|EEL23066.1| Exonuclease [Bacillus cereus Rock1-3] Length = 1022 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQTEVINFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDNVYTSVELTFQLKGKRYEIK 87 >gi|261346401|ref|ZP_05974045.1| putative ATP-dependent dsDNA exonuclease [Providencia rustigianii DSM 4541] gi|282565719|gb|EFB71254.1| putative ATP-dependent dsDNA exonuclease [Providencia rustigianii DSM 4541] Length = 1227 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F + L + G G GK+SL +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTEEPFASHGLFAITGATGAGKTSLLDAICLALYHQTPR 60 >gi|239827662|ref|YP_002950286.1| DNA repair protein RecN [Geobacillus sp. WCH70] gi|239807955|gb|ACS25020.1| DNA repair protein RecN [Geobacillus sp. WCH70] Length = 573 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|157863720|gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum] Length = 1316 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|157863716|gb|ABV90879.1| DNA repair protein Rad50 [Triticum monococcum] Length = 1316 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|152992327|ref|YP_001358048.1| hypothetical protein SUN_0732 [Sulfurovum sp. NBC37-1] gi|151424188|dbj|BAF71691.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 1005 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFT--EIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K +E+ FR + + +F + + NG+GK+S + +EW Sbjct: 1 MKFKKVELHAFRAYKNKDNGTFDFTFPNDKIANFISIYAPNGFGKTSFYDGVEWAVTKNI 60 Query: 79 QR 80 R Sbjct: 61 SR 62 >gi|149196266|ref|ZP_01873321.1| ATPase involved in DNA repair [Lentisphaera araneosa HTCC2155] gi|149140527|gb|EDM28925.1| ATPase involved in DNA repair [Lentisphaera araneosa HTCC2155] Length = 557 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I + + Q I+F L I+ G+ G GKS + ++ L ++ I+ Sbjct: 2 LKNLYIKNI-ALVDQQNIDFDQGLNIITGETGAGKSVIMGSMRLLMGQRAEKSL----IR 56 Query: 89 KRSIKTPMPMCMAVP 103 K + + +P Sbjct: 57 SGEQKAEISAILEIP 71 >gi|116326277|ref|YP_802997.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB32] gi|115343870|gb|ABI94879.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB32] Length = 562 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R + + K + + M KY +K Sbjct: 32 TLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIK 91 >gi|58383287|ref|YP_194859.1| hypothetical protein pU302L_053 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|157418162|ref|YP_001481234.1| hypothetical protein APECO1_O1CoBM79 [Escherichia coli APEC O1] gi|169546502|ref|YP_001711915.1| hypothetical protein pVM01_p066 [Escherichia coli] gi|256367838|ref|YP_003108395.1| hypothetical protein XCV [Escherichia coli] gi|300824709|ref|ZP_07104815.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331652541|ref|ZP_08353552.1| conserved hypothetical protein [Escherichia coli M718] gi|331685901|ref|ZP_08386478.1| conserved hypothetical protein [Escherichia coli H299] gi|37962766|gb|AAR05713.1| hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|62550900|emb|CAH64823.1| hypothetical protein [uncultured bacterium] gi|88770212|gb|ABD51649.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|168831054|gb|ACA34835.1| unknown [Escherichia coli] gi|228480775|gb|ACQ42102.1| hypothetical protein XCV [Escherichia coli] gi|300522799|gb|EFK43868.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|312914817|dbj|BAJ38791.1| putative ATP-dependent endonuclease of the OLD family [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|327536735|gb|AEA95567.1| hypothetical protein pSD853_88_103 [Salmonella enterica subsp. enterica serovar Dublin] gi|331049647|gb|EGI21713.1| conserved hypothetical protein [Escherichia coli M718] gi|331076854|gb|EGI48075.1| conserved hypothetical protein [Escherichia coli H299] Length = 521 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F++ I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFSNDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|49481991|gb|AAT66707.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A64] Length = 573 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|49481971|gb|AAT66697.1| DNA repair and genetic recombination protein [Geobacillus toebii] gi|49481981|gb|AAT66702.1| DNA repair and genetic recombination protein [Geobacillus toebii] Length = 573 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|49481973|gb|AAT66698.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A6] Length = 573 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|89895089|ref|YP_518576.1| hypothetical protein DSY2343 [Desulfitobacterium hafniense Y51] gi|219669502|ref|YP_002459937.1| DNA repair protein RecN [Desulfitobacterium hafniense DCB-2] gi|89334537|dbj|BAE84132.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539762|gb|ACL21501.1| DNA repair protein RecN [Desulfitobacterium hafniense DCB-2] Length = 555 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +I + +F E ++ F+ LTI +G+ G GKS L +A+ L G Sbjct: 2 LTEIHVENF-ALMEAVQLSFSRGLTIFSGETGTGKSMLIDALGVLLGG 48 >gi|329314665|gb|AEB89078.1| RecF/RecN/SMC N terminal domain protein [Staphylococcus aureus subsp. aureus T0131] Length = 647 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ + IS+F G E K F + G N GK++++ A++WL + Sbjct: 1 MKINKLTISNFAGIKEE-KFNFDGKDAKIYGNNATGKTTIATALQWLLF 48 >gi|238784172|ref|ZP_04628185.1| DNA repair protein recN [Yersinia bercovieri ATCC 43970] gi|238714881|gb|EEQ06880.1| DNA repair protein recN [Yersinia bercovieri ATCC 43970] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|238750402|ref|ZP_04611903.1| DNA repair protein recN [Yersinia rohdei ATCC 43380] gi|238711333|gb|EEQ03550.1| DNA repair protein recN [Yersinia rohdei ATCC 43380] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|238762780|ref|ZP_04623749.1| DNA repair protein recN [Yersinia kristensenii ATCC 33638] gi|238699085|gb|EEP91833.1| DNA repair protein recN [Yersinia kristensenii ATCC 33638] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|229496502|ref|ZP_04390216.1| RecF protein [Porphyromonas endodontalis ATCC 35406] gi|229316399|gb|EEN82318.1| RecF protein [Porphyromonas endodontalis ATCC 35406] Length = 372 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +E+ F+ +FA L G NG GK++L +AI +L + R H ++ Sbjct: 1 MVLEHLELVAFKSIA-TASCDFAPKLNCFFGGNGMGKTNLLDAIHYL----SMARSHLNT 55 Query: 87 IKKRSIK 93 + + +I+ Sbjct: 56 VDRLAIR 62 >gi|229096838|ref|ZP_04227807.1| Exonuclease [Bacillus cereus Rock3-29] gi|228686448|gb|EEL40357.1| Exonuclease [Bacillus cereus Rock3-29] Length = 1022 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 10/87 (11%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 ++ F + + + I F D + ++G G GK+++ +AI ++ YG + D S+ Sbjct: 1 MTAFGPYKQTEVINFDDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEERSDTSML 60 Query: 89 KRS-----IKTPMPMCMAVPRCKYQLK 110 + + T + + + +Y++K Sbjct: 61 RSQFADDDVYTSVELTFQLKGKRYEIK 87 >gi|227356271|ref|ZP_03840659.1| DNA repair protein RecN [Proteus mirabilis ATCC 29906] gi|227163381|gb|EEI48302.1| DNA repair protein RecN [Proteus mirabilis ATCC 29906] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ISHF E++ I+F+ +T + G+ G GKS +A+ GD+ Sbjct: 2 LTQLTISHFAIVRELE-IDFSGGMTTITGETGAGKSIAIDALGLCLGN------RGDANM 54 Query: 89 KRSIKTPMPMC 99 R T +C Sbjct: 55 VRPGATRADLC 65 >gi|226328157|ref|ZP_03803675.1| hypothetical protein PROPEN_02048 [Proteus penneri ATCC 35198] gi|225203861|gb|EEG86215.1| hypothetical protein PROPEN_02048 [Proteus penneri ATCC 35198] Length = 158 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ISHF E++ I+F+ +T + G+ G GKS +A+ GD+ Sbjct: 2 LTQLTISHFAIVRELE-IDFSGGMTTITGETGAGKSIAIDALGLCLGN------RGDANM 54 Query: 89 KRSIKTPMPMC 99 R T +C Sbjct: 55 VRPGATRADLC 65 >gi|222084353|ref|YP_002542882.1| DNA replication and repair protein [Agrobacterium radiobacter K84] gi|254790457|sp|B9JGW1|RECF_AGRRK RecName: Full=DNA replication and repair protein recF gi|221721801|gb|ACM24957.1| DNA replication and repair protein [Agrobacterium radiobacter K84] Length = 375 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++++ FR + + + ++ G NG GK++L EA+ L G RR Sbjct: 5 VFISRLKLTDFRNYAAAA-LTLDERHVVLTGDNGAGKTNLMEAVSLLSPGRGLRR 58 >gi|220936100|ref|YP_002514999.1| hypothetical protein Tgr7_2939 [Thioalkalivibrio sp. HL-EbGR7] gi|219997410|gb|ACL74012.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 631 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 20/30 (66%) Query: 47 EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 EF + + I+ G+NG GKS++++ I + G Sbjct: 24 EFHEGVNIIRGENGSGKSTIADFIFYALGG 53 >gi|198282751|ref|YP_002219072.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667121|ref|YP_002424946.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247272|gb|ACH82865.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519334|gb|ACK79920.1| DNA repair protein RecN [Acidithiobacillus ferrooxidans ATCC 23270] Length = 558 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 LL++++ F + I+FA LT++ G+ G GKS L +AI L Sbjct: 2 LLNLQVRDF-ALIDAVSIDFAAGLTVLTGETGAGKSILVDAIALLLGDKGHA 52 >gi|197285757|ref|YP_002151629.1| recombination and repair protein [Proteus mirabilis HI4320] gi|194683244|emb|CAR43948.1| DNA repair protein RecN [Proteus mirabilis HI4320] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ISHF E++ I+F+ +T + G+ G GKS +A+ GD+ Sbjct: 2 LTQLTISHFAIVRELE-IDFSGGMTTITGETGAGKSIAIDALGLCLGN------RGDANM 54 Query: 89 KRSIKTPMPMC 99 R T +C Sbjct: 55 VRPGATRADLC 65 >gi|220915711|ref|YP_002491015.1| hypothetical protein A2cp1_0592 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953565|gb|ACL63949.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 361 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L DI I FR ++ A +T+V G NG GK++L +A+ Sbjct: 2 LTDIHIEGFRSVRA-VRLRLAP-VTVVLGANGTGKTNLYQALR 42 >gi|158424885|ref|YP_001526177.1| hypothetical protein AZC_3261 [Azorhizobium caulinodans ORS 571] gi|158331774|dbj|BAF89259.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 476 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 29 LLDIEISHFRGFT---EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I FRG + ++F D + V+ NG GKSS+ EA+ + +G R Sbjct: 6 LASAAIEGFRGINNDGDPLVLKFKHDAVNSVHAPNGVGKSSIFEALHFALHGTVPR 61 >gi|94263248|ref|ZP_01287065.1| ATPase [delta proteobacterium MLMS-1] gi|93456466|gb|EAT06586.1| ATPase [delta proteobacterium MLMS-1] Length = 428 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLT--IVNGQNGYGKSSLSEAIEWLF-----YGY 77 ++ + I + R + E +I+F T ++ G NG GK++L +I G Sbjct: 3 IMMHITKITLKDVRCY-EDAEIDFGTSGTPIVICGNNGSGKTTLLRSIALGLCDHISAGA 61 Query: 78 TQRRKHGDSIKKRSIK 93 R GD I+K S Sbjct: 62 LLRDLPGDFIRKSSDD 77 >gi|238793788|ref|ZP_04637409.1| DNA repair protein recN [Yersinia intermedia ATCC 29909] gi|238726852|gb|EEQ18385.1| DNA repair protein recN [Yersinia intermedia ATCC 29909] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|238796721|ref|ZP_04640227.1| DNA repair protein recN [Yersinia mollaretii ATCC 43969] gi|238719452|gb|EEQ11262.1| DNA repair protein recN [Yersinia mollaretii ATCC 43969] Length = 553 Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|330719238|ref|ZP_08313838.1| DNA repair ATPase [Leuconostoc fallax KCTC 3537] Length = 559 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E ++F ++++ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LENLVIENF-AIIEKVDLQFDKGMSVLTGETGAGKSIIIDALTLLTGG----RASSDMVR 56 Query: 89 KRSIKTPMPMCMAVP 103 + K + +VP Sbjct: 57 HGARKATLQAVFSVP 71 >gi|314934007|ref|ZP_07841372.1| putative membrane protein [Staphylococcus caprae C87] gi|313654157|gb|EFS17914.1| putative membrane protein [Staphylococcus caprae C87] Length = 979 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI + F + KI+F T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIDFNKGFTEIFGENEAGKSTIQAFIHSILFGFPTKKSR 56 >gi|313888927|ref|ZP_07822587.1| conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845100|gb|EFR32501.1| conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 747 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + +F F + KIE + + ++ G+N GKS++ I+ +FYG+++ ++ Sbjct: 3 IKELGLLNFGKFEDK-KIELQEGINLIYGRNEEGKSTIVNFIDGIFYGFSRDSLSR-KVR 60 Query: 89 KRSIKTPMPMCMAVPR 104 + P + R Sbjct: 61 DDLFEKSRPWNSNLYR 76 >gi|290511373|ref|ZP_06550742.1| hypothetical protein HMPREF0485_03143 [Klebsiella sp. 1_1_55] gi|289776366|gb|EFD84365.1| hypothetical protein HMPREF0485_03143 [Klebsiella sp. 1_1_55] Length = 1096 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A K F L IE+ ++ GF + + T V G G GK++L +A+ Sbjct: 8 AEKESFILTRIELFNWGGFHGLHQAAIHQEGTAVIGPTGSGKTTLVDAL 56 >gi|225174783|ref|ZP_03728781.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] gi|225169910|gb|EEG78706.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] Length = 977 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + +S F + E FA + + N GK++L+ + + YG Sbjct: 6 LSVTLSGFGRYREETTFRFAPGVNVCLAGNEAGKTTLAAGLAAIIYGLPA 55 >gi|223043583|ref|ZP_03613628.1| hypothetical protein STACA0001_0705 [Staphylococcus capitis SK14] gi|222443071|gb|EEE49171.1| hypothetical protein STACA0001_0705 [Staphylococcus capitis SK14] Length = 979 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +EI + F + KI+F T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIDFNKGFTEIFGENEAGKSTIQAFIHSILFGFPTKKSR 56 >gi|291572177|dbj|BAI94449.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 661 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Query: 30 LDIEISHFRGFTEIQKIEFADHLT--------IVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F + Q I +T ++ G NG GK++L +A+ +FYG + Sbjct: 4 LELTLQNFGPYRGKQVINLRPQITGETVSPIVLLGGMNGGGKTTLMDAMRLVFYGARAQ 62 >gi|284054014|ref|ZP_06384224.1| DNA sulfur modification protein DndD [Arthrospira platensis str. Paraca] Length = 570 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Query: 30 LDIEISHFRGFTEIQKIEFADHLT--------IVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F + Q I +T ++ G NG GK++L +A+ +FYG + Sbjct: 4 LELTLQNFGPYRGKQVINLRPQITGETVSPIVLLGGMNGGGKTTLMDAMRLVFYGARAQ 62 >gi|188586140|ref|YP_001917685.1| ATP-dependent endonuclease family protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350827|gb|ACB85097.1| ATP-dependent endonuclease family protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 586 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ I+I++FRG + I F +H T+ G N GKS++ EA++ Sbjct: 4 IRVAKIKINNFRGIKFSELI-FPEH-TVFVGDNNSGKSTILEALDLTLG 50 >gi|167855717|ref|ZP_02478473.1| predicted ATP-dependent endonuclease of the OLD family protein [Haemophilus parasuis 29755] gi|167853173|gb|EDS24431.1| predicted ATP-dependent endonuclease of the OLD family protein [Haemophilus parasuis 29755] Length = 582 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL I I +FR + +IE + T++ G N GKS++ A+ Sbjct: 1 MKLRKIHIKNFRSIHD-VEIEVH-NYTMLVGANNAGKSNIMAALR 43 >gi|157863722|gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum] Length = 1316 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I R F K I F LT++ G NG GK+++ E ++ G Sbjct: 4 VDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTG 53 >gi|308271200|emb|CBX27809.1| hypothetical protein N47_C18670 [uncultured Desulfobacterium sp.] Length = 574 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I L ++ I +F + I F+D LT+++G+ G GKS + A+ L Sbjct: 5 RFINMLCELSIRNF-AIIDDLHIRFSDGLTVLSGETGAGKSIIINAVNLLLG 55 >gi|294635416|ref|ZP_06713906.1| ATP-dependent dsDNA exonuclease [Edwardsiella tarda ATCC 23685] gi|291091205|gb|EFE23766.1| ATP-dependent dsDNA exonuclease [Edwardsiella tarda ATCC 23685] Length = 975 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + KI+F+ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|269138434|ref|YP_003295134.1| exonuclease [Edwardsiella tarda EIB202] gi|267984094|gb|ACY83923.1| exonuclease [Edwardsiella tarda EIB202] gi|304558460|gb|ADM41124.1| Exonuclease SbcC [Edwardsiella tarda FL6-60] Length = 1233 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + KI+F+ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|257869720|ref|ZP_05649373.1| exonuclease SbcC [Enterococcus gallinarum EG2] gi|257803884|gb|EEV32706.1| exonuclease SbcC [Enterococcus gallinarum EG2] Length = 1052 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 34 ISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + +F + + ++F D L +V+G+ G GK+++ + + + +G T + Sbjct: 1 MKNFGPYIHEE-LDFGDFQEGGLFLVSGKTGAGKTTIFDGMTFALFGETSGNLRSGKEMR 59 Query: 90 RSIKTPMP 97 + +P Sbjct: 60 STFASPTE 67 >gi|238919110|ref|YP_002932624.1| exonuclease SbcC [Edwardsiella ictaluri 93-146] gi|238868678|gb|ACR68389.1| exonuclease SbcC [Edwardsiella ictaluri 93-146] Length = 1233 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L + + KI+F+ L + G G GK++L +AI Y T R Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|120403578|ref|YP_953407.1| ABC transporter--like protein [Mycobacterium vanbaalenii PYR-1] gi|119956396|gb|ABM13401.1| urea ABC transporter ATP-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 277 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 A+ L + L ++ F+ +++ F L + G NG GK+++ +AI Sbjct: 23 AQYLEVRGLTVDFDGFKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAIT 72 >gi|48696462|ref|YP_024504.1| putative exonuclease [Staphylococcus phage K] gi|66394958|ref|YP_240940.1| ORF009 [Staphylococcus phage G1] gi|37729156|gb|AAO47523.1| ORF74 [Staphylococcus phage K] gi|62636980|gb|AAX92091.1| ORF009 [Staphylococcus phage G1] gi|119658110|gb|ABL87145.1| putative nuclease [Staphylococcus phage 812] gi|182627934|gb|ACB89096.1| gp ORF103 [Staphylococcus phage A5W] Length = 639 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 9/71 (12%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQN---------GYGKSSLSEAIEWLFYG 76 + +E+++F E L ++ G+N G GKS+L AI + YG Sbjct: 1 MVVFKQVEVNNFLAIKEATLELDNRGLILIEGENKSNESFHSNGSGKSTLISAITYALYG 60 Query: 77 YTQRRKHGDSI 87 T++ D + Sbjct: 61 KTEKGLKADDV 71 >gi|332968938|gb|EGK07984.1| ATPase [Desmospora sp. 8437] Length = 515 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 10/60 (16%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I+I RG+ +I+F + + G+NG GKS++ + + DS K Sbjct: 54 LEWIKIRGVRGWAGE-RIDFKFPIVAIVGENGVGKSTIL---------QSAASIYKDSSK 103 >gi|330822269|ref|YP_004362490.1| hypothetical protein bgla_1p0550 [Burkholderia gladioli BSR3] gi|327374106|gb|AEA65460.1| hypothetical protein bgla_1p0550 [Burkholderia gladioli BSR3] Length = 595 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Query: 27 FKLLDIEISHFRG--FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ--RRK 82 L + I +FR + E+ F L ++ G N GK+++ +A+ L G+ + R Sbjct: 1 MHLSRLVIKNFRKLKYAELT---FQAGLNVLIGGNNVGKTAVIDALRALLAGHDEPYPRL 57 Query: 83 HGDSIKKRSIKTP 95 + + + S TP Sbjct: 58 GEEDVHRPSDGTP 70 >gi|260893592|ref|YP_003239689.1| SMC domain protein [Ammonifex degensii KC4] gi|260865733|gb|ACX52839.1| SMC domain protein [Ammonifex degensii KC4] Length = 445 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I + +F+ +IE + +T++ G++ GKS++ A+ WLFY Sbjct: 3 KIRRIILENFQSHR-YTEIELSPTVTVLVGESDRGKSAVVRALRWLFY 49 >gi|227530533|ref|ZP_03960582.1| DNA repair protein RecN [Lactobacillus vaginalis ATCC 49540] gi|227349539|gb|EEJ39830.1| DNA repair protein RecN [Lactobacillus vaginalis ATCC 49540] Length = 560 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 ++F+D +T++ G+ G GKS + +A+ L G R + I++ + K + A+P+ Sbjct: 17 SLDFSDQMTVLTGETGAGKSIIIDAVGLLAGG----RGSQEYIRRGADKLSLQGQFALPQ 72 >gi|254427639|ref|ZP_05041346.1| ABC transporter, ATP-binding protein [Alcanivorax sp. DG881] gi|196193808|gb|EDX88767.1| ABC transporter, ATP-binding protein [Alcanivorax sp. DG881] Length = 281 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 22 ARKLIFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 A K I L DI +S F+ ++ L + G NG GKS++ + I Sbjct: 36 ASKNILYLEDITVSFDGFKALNDLTMYIKTGELRCIIGPNGAGKSTMMDVIT 87 >gi|148655059|ref|YP_001275264.1| SMC domain-containing protein [Roseiflexus sp. RS-1] gi|148567169|gb|ABQ89314.1| SMC domain protein [Roseiflexus sp. RS-1] Length = 1022 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 30 LDIEISHFRGFTE-IQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +F + E + +EF + + G+NG GKS+L +AI W +G + R D Sbjct: 4 RKLALQNFMCYREGLPPLEFDGMSIACLAGENGAGKSALLDAITWALWG--EARLKSDD 60 >gi|331685340|ref|ZP_08385926.1| conserved hypothetical protein [Escherichia coli H299] gi|323939571|gb|EGB35777.1| hypothetical protein ERDG_03755 [Escherichia coli E482] gi|331077711|gb|EGI48923.1| conserved hypothetical protein [Escherichia coli H299] Length = 512 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 26/43 (60%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L + IS+ +G + +E + ++++ G+NG GKS++ I Sbjct: 22 QLRRVSISNIKGVADDFCLELNNGISVICGKNGVGKSTILRTI 64 >gi|229491781|ref|ZP_04385602.1| ferric enterobactin transport ATP-binding protein FepC [Rhodococcus erythropolis SK121] gi|229321462|gb|EEN87262.1| ferric enterobactin transport ATP-binding protein FepC [Rhodococcus erythropolis SK121] Length = 274 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 R + +E D T+V G NG GKS+L A+ + + R + + S +T Sbjct: 22 RTIVDELSLEIPDGGFTVVVGPNGCGKSTLLRALGRMLTPRSGRVVLDGNDIR-SYRTK 79 >gi|303287496|ref|XP_003063037.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455673|gb|EEH52976.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1089 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 S Y + + + +++ +F + + ++E L ++ G NG GKSS A+ G T Sbjct: 48 SEYPKGAVVR---VKLHNFMTYGD-VEMEPGPRLNVILGPNGTGKSSFVCALAIGLAGST 103 Query: 79 QRRKHGDSI 87 + D I Sbjct: 104 RLLGRADKI 112 >gi|124484875|ref|YP_001029491.1| hypothetical protein Mlab_0046 [Methanocorpusculum labreanum Z] gi|124362416|gb|ABN06224.1| SMC domain protein [Methanocorpusculum labreanum Z] Length = 242 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 12/90 (13%) Query: 27 FKLLDIEISHF------------RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I + HF R + ++ F +T G+NG GKS+L EAI Sbjct: 5 VYLHKIMLKHFDDTSYLADLPVVRNLEHMGELSFESPVTFFVGENGSGKSTLLEAIAISA 64 Query: 75 YGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 + S +S ++ + + + R Sbjct: 65 GFNAEGGSRNFSFATKSTESNLHSYLTLSR 94 >gi|146312737|ref|YP_001177811.1| recombination and repair protein [Enterobacter sp. 638] gi|145319613|gb|ABP61760.1| DNA replication and repair protein RecN [Enterobacter sp. 638] gi|190341567|gb|ACE74860.1| RecN [Enterobacter sp. 638] Length = 553 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFLSGMTAITGETGAGKSIAIDALGLCLGG----RAEGDIVR 56 >gi|302380687|ref|ZP_07269152.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|303233678|ref|ZP_07320332.1| conserved hypothetical protein [Finegoldia magna BVS033A4] gi|302311630|gb|EFK93646.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3] gi|302495112|gb|EFL54864.1| conserved hypothetical protein [Finegoldia magna BVS033A4] Length = 750 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K++ +++ F F IEF D ++ G N GK+++S+ IE +FYG+ Sbjct: 1 MKIIRLDLISFGRFNNYT-IEFGDKFNLIYGLNESGKTTISKFIEGVFYGF 50 >gi|300724101|ref|YP_003713418.1| DNA recombination repair protein [Xenorhabdus nematophila ATCC 19061] gi|297630635|emb|CBJ91300.1| protein used in recombination and DNA repair with nucleoside triphosphate hydrolase domain [Xenorhabdus nematophila ATCC 19061] Length = 558 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFRSGMTAITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|290476147|ref|YP_003469047.1| nucleoside triphosphate hydrolase domain-containing protein [Xenorhabdus bovienii SS-2004] gi|289175480|emb|CBJ82283.1| protein used in recombination and DNA repair with nucleoside triphosphate hydrolase domain [Xenorhabdus bovienii SS-2004] Length = 557 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTISNFAIVRELE-IDFRSGMTAITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|257877019|ref|ZP_05656672.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811185|gb|EEV40005.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 896 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ ++L EI+ F + E Q F ++ G N GKS+L + I + +G++++ Sbjct: 4 VVMRILKAEITGFGKYHE-QSFAFHPQNQLLFGHNEIGKSTLYQFIAAILFGFSKKTAKK 62 Query: 85 DS 86 Sbjct: 63 KD 64 >gi|228860990|ref|YP_002854013.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB51] gi|227438664|gb|ACP30976.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB51] Length = 562 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R + + K + + M KY +K Sbjct: 32 TLITGRNGGGKSTMLEAITFGLFGKPFRDVKKGQLINSTNKKELLVELWMEYDEKKYYIK 91 >gi|194875725|ref|XP_001973652.1| GG16203 [Drosophila erecta] gi|190655435|gb|EDV52678.1| GG16203 [Drosophila erecta] Length = 1025 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLTGRIHSVYCKDFVSYSEITFYP-KHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|88603865|ref|YP_504043.1| hypothetical protein Mhun_2627 [Methanospirillum hungatei JF-1] gi|88189327|gb|ABD42324.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 347 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + I +F+ F + I D + + G N GK++ +A+ G + Sbjct: 1 MTLTSLTIRNFKKF-DDVTIPLGDPVVFI-GPNNSGKTTALQALTLFAIGIS 50 >gi|293393723|ref|ZP_06638031.1| recombination protein F [Serratia odorifera DSM 4582] gi|291423767|gb|EFE96988.1| recombination protein F [Serratia odorifera DSM 4582] Length = 362 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A + G NG GK+S+ EA+ L +G R Sbjct: 1 MALTRLLIKDFRNI-ESADLAPAPGFNFLVGANGSGKTSVLEAVYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|238791288|ref|ZP_04634927.1| hypothetical protein yinte0001_30410 [Yersinia intermedia ATCC 29909] gi|238729421|gb|EEQ20936.1| hypothetical protein yinte0001_30410 [Yersinia intermedia ATCC 29909] Length = 471 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 6/70 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSE----AIEWLFYGYTQRRKH 83 + ++ IS+FR + + F++ +L ++ G+NG GKSS+ + ++ WL + Sbjct: 1 MEELSISNFRAL-DELTLNFSEKNLIVLAGENGVGKSSILDGLSYSLSWLVNRILYKGGK 59 Query: 84 GDSIKKRSIK 93 G I++ I+ Sbjct: 60 GKEIERLDIR 69 >gi|238755970|ref|ZP_04617296.1| hypothetical protein yruck0001_28330 [Yersinia ruckeri ATCC 29473] gi|238705822|gb|EEP98213.1| hypothetical protein yruck0001_28330 [Yersinia ruckeri ATCC 29473] Length = 872 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 +S Q + F +LT+V G NG GKS + ++ + ++ +K K Sbjct: 80 VSGVNALAVDQTLSFGPNLTVVYGPNGAGKSGYARMLKSACFTRSKDTGILGDVKLAKDK 139 Query: 94 TPMP 97 P P Sbjct: 140 QPKP 143 >gi|225017785|ref|ZP_03706977.1| hypothetical protein CLOSTMETH_01714 [Clostridium methylpentosum DSM 5476] gi|224949436|gb|EEG30645.1| hypothetical protein CLOSTMETH_01714 [Clostridium methylpentosum DSM 5476] Length = 662 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 KLL + +++F+G + +F + G NG GK+++ A+ +L + + Sbjct: 1 MKLLKLSLTNFQGIP-HAEFDFDGQSASIYGTNGTGKTTVFNAMTYLLFDKASTGER 56 >gi|326386397|ref|ZP_08208020.1| hypothetical protein Y88_2291 [Novosphingobium nitrogenifigens DSM 19370] gi|326209058|gb|EGD59852.1| hypothetical protein Y88_2291 [Novosphingobium nitrogenifigens DSM 19370] Length = 1172 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +T+ G NG GK+S+ AI W G+ R + Sbjct: 1 MTLFEGANGSGKTSILNAIIWCITGHLIRSQR 32 >gi|323699541|ref|ZP_08111453.1| hypothetical protein DND132_2133 [Desulfovibrio sp. ND132] gi|323459473|gb|EGB15338.1| hypothetical protein DND132_2133 [Desulfovibrio desulfuricans ND132] Length = 452 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I I +F E ++ +TI+ G N GKS++ EA+ R + Sbjct: 2 ITKITIDNFMAH-EHTELTLGPGVTILTGANNTGKSAVVEALR-CLATNPARSPNPALYI 59 Query: 89 KRSIKTPM 96 + K Sbjct: 60 RHGAKEAR 67 >gi|319407988|emb|CBI81642.1| DNA replication and repair protein [Bartonella schoenbuchensis R1] Length = 390 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++H+R + I + + G NG GK++L EA+ +L G RR Sbjct: 11 VTVRQLKLTHYRNYCSFN-IHLSGQHVVFTGHNGAGKTNLLEALSFLSPGRGLRRAAYSD 69 Query: 87 IKKR 90 I Sbjct: 70 ISFS 73 >gi|319654166|ref|ZP_08008255.1| ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317394100|gb|EFV74849.1| ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 9/70 (12%) Query: 17 LTSYYARKLIFKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 L+S+Y R L EI F + + ++ F +T + G+NG GKS+L EA Sbjct: 4 LSSHYVRG--ISLKREEIPSFNQYPFNLPSLKTMDEVPFHPKVTFLIGENGMGKSTLLEA 61 Query: 70 IEWLFYGYTQ 79 + + Sbjct: 62 VAVALGFNAE 71 >gi|187478495|ref|YP_786519.1| GTP-binding protein [Bordetella avium 197N] gi|115423081|emb|CAJ49612.1| putative GTP-binding protein [Bordetella avium 197N] Length = 873 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIE 71 +L I + FR F E ++ D L I+ G N GKS+ + A+ Sbjct: 1 MRLHRIALQEFRKFREPVVLDGLDAGLNIIAGPNEAGKSTYAMALR 46 >gi|82701338|ref|YP_410904.1| ATP-dependent dsDNA exonuclease (SbcC)-like [Nitrosospira multiformis ATCC 25196] gi|82409403|gb|ABB73512.1| ATP-dependent dsDNA exonuclease (SbcC)-like protein [Nitrosospira multiformis ATCC 25196] Length = 1088 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + +I+ +D + + G G GK+++ +AI YG T R Sbjct: 1 MKILQVRFKNLNSLMGEWEIDLTHPAFTSDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|219666714|ref|YP_002457149.1| ATPase AAA [Desulfitobacterium hafniense DCB-2] gi|219536974|gb|ACL18713.1| AAA ATPase [Desulfitobacterium hafniense DCB-2] Length = 340 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 L I + +F F + +IEF D + ++ G+NG GK+ + Sbjct: 1 MALKKICLENFTVF-DKMEIEFCDGVNVLIGENGTGKTHIM 40 >gi|323492776|ref|ZP_08097919.1| ATP-dependent endonuclease [Vibrio brasiliensis LMG 20546] gi|323312972|gb|EGA66093.1| ATP-dependent endonuclease [Vibrio brasiliensis LMG 20546] Length = 162 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MKLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDAL 42 >gi|239908230|ref|YP_002954971.1| hypothetical protein DMR_35940 [Desulfovibrio magneticus RS-1] gi|239798096|dbj|BAH77085.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 499 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + + + F I+ LT + G N GKS++ EA+ Sbjct: 2 IRRLTLVDFMAHG-RTVIDLPPGLTALTGPNNSGKSAVVEALR-CLTEN 48 >gi|118467978|ref|YP_889254.1| hypothetical protein MSMEG_5002 [Mycobacterium smegmatis str. MC2 155] gi|118169265|gb|ABK70161.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 877 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++++RG T + IEF D + +V+G N GKSS+ EA++ L Sbjct: 1 MKLHRLVLTNYRGITHRE-IEFPDHGVVVVSGANEIGKSSMIEALDLLI 48 >gi|51473382|ref|YP_067139.1| DNA repair protein RecN [Rickettsia typhi str. Wilmington] gi|81826333|sp|Q68XI5|RECN_RICTY RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|51459694|gb|AAU03657.1| DNA repair protein RecN [Rickettsia typhi str. Wilmington] Length = 554 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNV 54 >gi|21673737|ref|NP_661802.1| hypothetical protein CT0909 [Chlorobium tepidum TLS] gi|21646861|gb|AAM72144.1| hypothetical protein CT0909 [Chlorobium tepidum TLS] Length = 402 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGD 85 ++ + + ++R + +++ LT++ G NG GKS+L + +L +G R+ Sbjct: 10 RVEALHVQNYRAL-QNVRLDSITPLTVLLGPNGSGKSTLVDVFAFLSECFGEGLRKAWDR 68 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQLK 110 + R +++ + V +Y+ K Sbjct: 69 RGRFRELRSRDSVGPIVIELQYREK 93 >gi|25029205|ref|NP_739259.1| putative ABC transporter [Corynebacterium efficiens YS-314] gi|259505797|ref|ZP_05748699.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium efficiens YS-314] gi|23494493|dbj|BAC19459.1| putative ABC transporter [Corynebacterium efficiens YS-314] gi|259166585|gb|EEW51139.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium efficiens YS-314] Length = 239 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 FR ++F +TI+ G+NG GKS+L E I Sbjct: 28 FRALRAAGSLDFRAPITIITGENGVGKSTLLEGI 61 >gi|295094586|emb|CBK83677.1| ATPase involved in DNA repair [Coprococcus sp. ART55/1] Length = 923 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +++ +S F + +Q ++ A + L +V G G GK+++ +AI + Y Sbjct: 1 MRPINLTMSAFGPYAGVQMLDMAQLGAEGLYLVTGDTGAGKTTIFDAICYALYDEPSGAS 60 Query: 83 HGDSIKKRSI 92 + + + Sbjct: 61 RDARMMRSTY 70 >gi|282895757|ref|ZP_06303844.1| ATPase involved in DNA repair [Raphidiopsis brookii D9] gi|281199257|gb|EFA74123.1| ATPase involved in DNA repair [Raphidiopsis brookii D9] Length = 249 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 30 LDIEISHFRGFTEIQKIEFA--------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L++ + +F + Q I + ++ G NG GK++L +AI YG + Sbjct: 4 LELVLQNFGPYAGKQVINLDTRIDRNNIRPIILLGGMNGGGKTTLMDAIRLALYGARAQC 63 Query: 82 ------KHGDSIKKRSIKTPMPMC 99 +GD + + P+ Sbjct: 64 STRGNLSYGDFLTQCVNNKADPIN 87 >gi|282898767|ref|ZP_06306754.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] gi|281196294|gb|EFA71204.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] Length = 684 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 30 LDIEISHFRGFTEIQKIEFA--------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L++ + +F + Q I + ++ G NG GK++L +AI YG + Sbjct: 4 LELVLQNFGPYAGKQVINLDTRIDQNNIRPIILLGGMNGGGKTTLMDAIRLALYGARAQC 63 Query: 82 ------KHGDSIKKRSIKTPMPMC 99 +GD + + P+ Sbjct: 64 STRGNLSYGDFLTQCVNNKADPIN 87 >gi|255994581|ref|ZP_05427716.1| DNA repair protein RecN [Eubacterium saphenum ATCC 49989] gi|255993294|gb|EEU03383.1| DNA repair protein RecN [Eubacterium saphenum ATCC 49989] Length = 545 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ I+I +F EI I+FA L I+ G+ G GKS L+ AI +F + Sbjct: 4 MEISKIQIKNFATIAEIN-IKFAKGLNIITGETGAGKSVLATAIGAVFNPRANKSL 58 >gi|288572969|ref|ZP_06391326.1| putative ATP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568710|gb|EFC90267.1| putative ATP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 348 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I + FT + F+ L ++ G+NG GKS L +A+ + + Sbjct: 2 LKSMDIENLTVFT-KANVSFSSGLNVIVGENGTGKSHLLKAV-YSLLAVSAEGGRKSK 57 >gi|154503046|ref|ZP_02040106.1| hypothetical protein RUMGNA_00868 [Ruminococcus gnavus ATCC 29149] gi|153796287|gb|EDN78707.1| hypothetical protein RUMGNA_00868 [Ruminococcus gnavus ATCC 29149] Length = 361 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ ++R + E+ + F I+ G N GK+++ EA+ + R Sbjct: 1 MVIKSLKLKNYRNY-ELLDMTFDSKTNILYGDNALGKTNILEALYLSGTTKSHRGTKDRD 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 LIQFGRE 66 >gi|72161896|ref|YP_289553.1| ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components [Thermobifida fusca YX] gi|71915628|gb|AAZ55530.1| ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components [Thermobifida fusca YX] Length = 299 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Query: 45 KIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGDSIKKRSIK------TPM 96 ++ A+ + G NG GKS+L +A+ + + R HG I+K+ K + Sbjct: 42 TVDIAEGEFVAIVGPNGCGKSTLLKALGRVLRPLSGRVLLHGRDIRKQRSKDVARQLALL 101 Query: 97 PMCMAVP 103 P AVP Sbjct: 102 PQNPAVP 108 >gi|15642383|ref|NP_232016.1| hypothetical protein VC2386 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591075|ref|ZP_01678387.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153820043|ref|ZP_01972710.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|229507550|ref|ZP_04397055.1| ATP binding protein [Vibrio cholerae BX 330286] gi|229519390|ref|ZP_04408833.1| ATP binding protein [Vibrio cholerae RC9] gi|229607056|ref|YP_002877704.1| ATP binding protein [Vibrio cholerae MJ-1236] gi|254849507|ref|ZP_05238857.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255746939|ref|ZP_05420884.1| ATP binding protein [Vibrio cholera CIRS 101] gi|262161518|ref|ZP_06030628.1| ATP binding protein [Vibrio cholerae INDRE 91/1] gi|298500254|ref|ZP_07010059.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656958|gb|AAF95529.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|53148487|dbj|BAD52080.1| hypothetical nucleotide-binding protein [Vibrio cholerae] gi|121547080|gb|EAX57216.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|126509413|gb|EAZ72007.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|229344079|gb|EEO09054.1| ATP binding protein [Vibrio cholerae RC9] gi|229355055|gb|EEO19976.1| ATP binding protein [Vibrio cholerae BX 330286] gi|229369711|gb|ACQ60134.1| ATP binding protein [Vibrio cholerae MJ-1236] gi|254845212|gb|EET23626.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255735341|gb|EET90741.1| ATP binding protein [Vibrio cholera CIRS 101] gi|262028829|gb|EEY47483.1| ATP binding protein [Vibrio cholerae INDRE 91/1] gi|297540947|gb|EFH77001.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 540 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +I + ++ F++++ + TI+ G NG GKS++ E+I Sbjct: 62 IRLRNISLYDYKKFSKLKFTSSEKNTTIIIGNNGSGKSTILESISKCL 109 >gi|326335178|ref|ZP_08201375.1| recombination protein F [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692708|gb|EGD34650.1| recombination protein F [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 378 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I +F+ E ++ F+ L + G NG GK++ +AI Sbjct: 20 MFLKQLYILNFKNI-ENKEFSFSPKLNCLVGNNGVGKTNSLDAI 62 >gi|323440108|gb|EGA97823.1| hypothetical protein SAO11_1244 [Staphylococcus aureus O11] gi|323442782|gb|EGB00408.1| hypothetical protein SAO46_1345 [Staphylococcus aureus O46] Length = 514 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I I F+ F ++ ++F +H +++ G+N GKS++ AI+ + Sbjct: 1 MSLSKIIIKGFKKFKCLE-LDFNEHFSVLVGENEVGKSTILSAIDIVL 47 >gi|317498146|ref|ZP_07956448.1| ABC transporter [Lachnospiraceae bacterium 5_1_63FAA] gi|316894623|gb|EFV16803.1| ABC transporter [Lachnospiraceae bacterium 5_1_63FAA] Length = 290 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSIKKRSIK 93 IEF+D + + G NG GK++L I + + + + G IK K Sbjct: 23 IEFSDGVYGILGANGAGKTTLISIITGILQQTSGQVKLDGSDIKDMGTK 71 >gi|259418018|ref|ZP_05741937.1| ATPase [Silicibacter sp. TrichCH4B] gi|259346924|gb|EEW58738.1| ATPase [Silicibacter sp. TrichCH4B] Length = 434 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 8/74 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-------GYTQ 79 + + + +F+GF E T++ G+NG GKSS+ +A+ F + Sbjct: 1 MHIDRLIVQNFKGF-ENFDQRLNCRFTLIVGKNGVGKSSILDALSVAFGAFLLGIPEASS 59 Query: 80 RRKHGDSIKKRSIK 93 R +++ S + Sbjct: 60 RHIQKGEVRETSRE 73 >gi|161936342|ref|YP_128267.2| recombination protein F [Photobacterium profundum SS9] Length = 359 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR E + + + G NG GK+S+ EAI +L +G + R Sbjct: 1 MALTRLIVKDFRNI-EACDLALSPRFNFLVGANGSGKTSVLEAIHYLGHGRSFRSHLTSR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQQ 66 >gi|145352119|ref|XP_001420405.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580639|gb|ABO98698.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1266 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 10/77 (12%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQN---------GYGKSSLS 67 T ++ + +E+ F F + + +V G+N G GK++L Sbjct: 420 TRRQSKGVSVSFETVEVEGFGTFQSATRYPLGARGVCVVVGENKSDTCSDSNGAGKTTLV 479 Query: 68 EAIEWLFYGYTQRRKHG 84 + W G + R G Sbjct: 480 MSPMWALTGQSDLRIDG 496 >gi|153823341|ref|ZP_01976008.1| conserved hypothetical protein [Vibrio cholerae B33] gi|229512254|ref|ZP_04401733.1| hypothetical protein VCE_003666 [Vibrio cholerae B33] gi|126519148|gb|EAZ76371.1| conserved hypothetical protein [Vibrio cholerae B33] gi|229352219|gb|EEO17160.1| hypothetical protein VCE_003666 [Vibrio cholerae B33] Length = 540 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +I + ++ F++++ + TI+ G NG GKS++ E+I Sbjct: 62 IRLRNISLYDYKKFSKLKFTSSEKNTTIIIGNNGSGKSTILESISKCL 109 >gi|160880631|ref|YP_001559599.1| DNA repair protein RecN [Clostridium phytofermentans ISDg] gi|160429297|gb|ABX42860.1| DNA repair protein RecN [Clostridium phytofermentans ISDg] Length = 561 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + + +F + ++ F DHL I+ G+ G GKS L ++I G + Sbjct: 2 LLSLHVKNF-AIIDEVEVYFKDHLNILTGETGAGKSILIDSINVALGGKVTKDI 54 >gi|49481915|gb|AAT66669.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A68] Length = 573 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIYLLIGG 48 >gi|49481909|gb|AAT66666.1| DNA repair and genetic recombination protein [Geobacillus caldoxylosilyticus] Length = 573 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIYLLIGG 48 >gi|49481905|gb|AAT66664.1| DNA repair and genetic recombination protein [Geobacillus caldoxylosilyticus] Length = 573 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIYLLIGG 48 >gi|49481907|gb|AAT66665.1| DNA repair and genetic recombination protein [Geobacillus caldoxylosilyticus] Length = 573 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEKGLTVLTGETGAGKSIIIDAIYLLIGG 48 >gi|320538400|ref|ZP_08038274.1| exonuclease SbcC [Treponema phagedenis F0421] gi|320144756|gb|EFW36498.1| exonuclease SbcC [Treponema phagedenis F0421] Length = 1029 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +E+ + F + F+ + +V G+ G GK++L +AI + FYG Sbjct: 1 MRPKKLELQNIGPFMNTHSVNFSALGSIFLVCGKTGAGKTTLFDAIFYAFYG 52 >gi|303230837|ref|ZP_07317584.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] gi|302514597|gb|EFL56592.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6] Length = 538 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I+I +++ + I + I G+N GKSS+ EA+ + G R +G Sbjct: 1 MYITKIKILNYKSIAD-TIINLNKDMNIFVGENDAGKSSILEALSAVLMG----RINGSG 55 Query: 87 I 87 I Sbjct: 56 I 56 >gi|255010553|ref|ZP_05282679.1| ATP-dependent exonuclease SbcC [Bacteroides fragilis 3_1_12] gi|313148360|ref|ZP_07810553.1| ATP-dependent exonuclease sbcC [Bacteroides fragilis 3_1_12] gi|313137127|gb|EFR54487.1| ATP-dependent exonuclease sbcC [Bacteroides fragilis 3_1_12] Length = 987 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|170761193|ref|YP_001786315.1| hypothetical protein CLK_0367 [Clostridium botulinum A3 str. Loch Maree] gi|169408182|gb|ACA56593.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch Maree] Length = 244 Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 19/26 (73%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAI 70 +IEF +T + G+NG GKS++ EAI Sbjct: 35 RIEFHPKVTYIVGENGTGKSTILEAI 60 >gi|163740533|ref|ZP_02147927.1| hypothetical protein RG210_10537 [Phaeobacter gallaeciensis 2.10] gi|161386391|gb|EDQ10766.1| hypothetical protein RG210_10537 [Phaeobacter gallaeciensis 2.10] Length = 876 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL+ I +++ R F + +I L +++ N GKS++ +A+ LF+ Sbjct: 1 MKLISIRLTNVRRFVDPVEITGIGPGLNLLSAPNEQGKSTIFDALHALFF 50 >gi|90578242|ref|ZP_01234053.1| transporter [Vibrio angustum S14] gi|90441328|gb|EAS66508.1| transporter [Vibrio angustum S14] Length = 246 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +I ++ F E+ IEF +T G+NG GKS+L EAI Sbjct: 12 IELKREKIDNYDQFPFCIPAIKELDVIEFHPDVTFFVGENGSGKSTLIEAIAVSMG 67 >gi|311993383|ref|YP_004010248.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj9] gi|295917340|gb|ADG60011.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj9] Length = 560 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 26 IFKLLDIEISHFRGF-TEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 IFKL +I + +E I H T+V G NG GKS+L EAI + +G R+ Sbjct: 3 IFKLKEIVYRNLLAVGSEPITINLQKSHKTLVTGSNGAGKSTLIEAITYALFGKPFRKIK 62 >gi|301310649|ref|ZP_07216588.1| DNA repair protein RecN [Bacteroides sp. 20_3] gi|300832223|gb|EFK62854.1| DNA repair protein RecN [Bacteroides sp. 20_3] Length = 554 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I F +++ G+ G GKS + A+ + +R G SIK Sbjct: 2 LKSLFIQNF-VLIDNLDIRFDKGFSVITGETGAGKSIILGALSLVLG----QRADGKSIK 56 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 K S K + V KYQL+ Sbjct: 57 KGSDKCVIEAVFDVS--KYQLE 76 >gi|262382076|ref|ZP_06075214.1| DNA repair protein RecN [Bacteroides sp. 2_1_33B] gi|262297253|gb|EEY85183.1| DNA repair protein RecN [Bacteroides sp. 2_1_33B] Length = 554 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I F +++ G+ G GKS + A+ + +R G SIK Sbjct: 2 LKSLFIQNF-VLIDNLDIRFDKGFSVITGETGAGKSIILGALSLVLG----QRADGKSIK 56 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 K S K + V KYQL+ Sbjct: 57 KGSDKCVIEAVFDVS--KYQLE 76 >gi|227524412|ref|ZP_03954461.1| ATPase [Lactobacillus hilgardii ATCC 8290] gi|227088426|gb|EEI23738.1| ATPase [Lactobacillus hilgardii ATCC 8290] Length = 610 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + I+ +++ F +I F LT++ +NG GKSS+ A+ G T Sbjct: 97 YISSIKFPYYKNFIPFSEINFEFPLTVLVEKNGCGKSSILHALYGCPRGQT 147 >gi|159029955|emb|CAO90334.1| recN [Microcystis aeruginosa PCC 7806] Length = 584 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I +F + ++ F L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSCLQIENF-TLIDRLELTFGSGLNVLTGETGAGKSIILDAIDIVLGGKVNHRV 54 >gi|153010463|ref|YP_001371677.1| ATP-dependent endonuclease, OLD family protein [Ochrobactrum anthropi ATCC 49188] gi|151562351|gb|ABS15848.1| ATP-dependent endonuclease, OLD family protein [Ochrobactrum anthropi ATCC 49188] Length = 681 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L I +FR +++ + F H T + G NG GKSS+ +AIE + T + D Sbjct: 1 MQLERARIRNFRSLRDVEVV-FGAH-TALIGGNGAGKSSILKAIE--KFYSTTKNCDADD 56 Query: 87 IKKRSIKTPMPMCM 100 R P+ + + Sbjct: 57 FFGRDQGQPIEIEL 70 >gi|150007349|ref|YP_001302092.1| DNA repair protein recN [Parabacteroides distasonis ATCC 8503] gi|255014020|ref|ZP_05286146.1| DNA repair protein recN [Bacteroides sp. 2_1_7] gi|256839640|ref|ZP_05545149.1| DNA repair protein RecN [Parabacteroides sp. D13] gi|298375337|ref|ZP_06985294.1| DNA repair protein RecN [Bacteroides sp. 3_1_19] gi|149935773|gb|ABR42470.1| DNA repair protein recN [Parabacteroides distasonis ATCC 8503] gi|256738570|gb|EEU51895.1| DNA repair protein RecN [Parabacteroides sp. D13] gi|298267837|gb|EFI09493.1| DNA repair protein RecN [Bacteroides sp. 3_1_19] Length = 554 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I F +++ G+ G GKS + A+ + +R G SIK Sbjct: 2 LKSLFIQNF-VLIDNLDIRFDKGFSVITGETGAGKSIILGALSLVLG----QRADGKSIK 56 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 K S K + V KYQL+ Sbjct: 57 KGSDKCVIEAVFDVS--KYQLE 76 >gi|95928518|ref|ZP_01311265.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] gi|95135308|gb|EAT16960.1| SMC protein-like [Desulfuromonas acetoxidans DSM 684] Length = 934 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Query: 33 EISHFRG----FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDSI 87 E +F F + I + V G NG GK++L + I L + R + + Sbjct: 3 EFKNFEAVHWDFWQRIAIPLDGQINTVVGPNGSGKTTLLDGIRTLLGIRCSSERDYRRYV 62 Query: 88 KKRSIKT 94 +++ + T Sbjct: 63 RRKKMAT 69 >gi|307325241|ref|ZP_07604444.1| SMC domain protein [Streptomyces violaceusniger Tu 4113] gi|306889045|gb|EFN20028.1| SMC domain protein [Streptomyces violaceusniger Tu 4113] Length = 458 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--------HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L ++ + + R F + ++ T++ G+NG GK++L A+ G Sbjct: 1 MYLKNLRLRNIRSFHGARDVDLDLTRPDGSYAGWTVLAGRNGSGKTTLLRAVALTISGPA 60 Query: 79 QRR 81 R Sbjct: 61 VAR 63 >gi|282860299|ref|ZP_06269368.1| DNA replication and repair protein RecF [Prevotella bivia JCVIHMP010] gi|282586896|gb|EFB92132.1| DNA replication and repair protein RecF [Prevotella bivia JCVIHMP010] Length = 368 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ +E + L G NG GK++L +AI +L + + Sbjct: 1 MRLDKLSIINYKNIQAAT-LELSPKLNCFIGHNGEGKTNLLDAIYYLSFCKSAFNPKDSE 59 Query: 87 I 87 + Sbjct: 60 V 60 >gi|169824399|ref|YP_001692010.1| putative DNA double-strand break repair rad50 ATPase [Finegoldia magna ATCC 29328] gi|167831204|dbj|BAG08120.1| putative DNA double-strand break repair rad50 ATPase [Finegoldia magna ATCC 29328] Length = 750 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K++ +++ F F IEF D ++ G N GK+++S+ IE +FYG+ Sbjct: 1 MKIIRLDLISFGRFNNYT-IEFGDKFNLIYGLNESGKTTISKFIEGVFYGF 50 >gi|149248992|ref|XP_001528836.1| hypothetical protein LELG_05762 [Lodderomyces elongisporus NRRL YB-4239] gi|146453325|gb|EDK47581.1| hypothetical protein LELG_05762 [Lodderomyces elongisporus NRRL YB-4239] Length = 260 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + ++E + + G+NG GKS++ I G SI+ Sbjct: 103 IEKLTLKNFMCH-DFFELELGPQINFIIGRNGSGKSAILTGISVALGAKANDTNRGSSIR 161 Query: 89 KR 90 Sbjct: 162 DL 163 >gi|157828108|ref|YP_001494350.1| DNA repair protein RecN [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800589|gb|ABV75842.1| DNA repair protein RecN [Rickettsia rickettsii str. 'Sheila Smith'] Length = 545 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|313895627|ref|ZP_07829183.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975753|gb|EFR41212.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 550 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Query: 29 LLDIEISHFRGFTEI-QKIEFADHLTIVNGQ----NGYGKSSLSEAIEWLFYGYTQRRKH 83 L+ + F I F + L +V G N GKS+ I+++F G + + Sbjct: 2 LVKLRCEKFSAHISKEHTISFHEGLNVVCGDDKGSNAIGKSTFLLIIDFVFGGNSYTKLA 61 Query: 84 GDSIKKRSIKT 94 D ++ + T Sbjct: 62 KDIMENIGVHT 72 >gi|299822990|ref|ZP_07054876.1| DNA repair protein RecN [Listeria grayi DSM 20601] gi|299816519|gb|EFI83757.1| DNA repair protein RecN [Listeria grayi DSM 20601] Length = 566 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F + + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELTIKNF-AIIDSLALSFEEGMTVLTGETGAGKSIIFDALGLLIGG----RGSADFIR 59 Query: 89 KRSIKTPMP 97 + + Sbjct: 60 HGEQRLELQ 68 >gi|304405064|ref|ZP_07386724.1| SMC domain protein [Paenibacillus curdlanolyticus YK9] gi|304345943|gb|EFM11777.1| SMC domain protein [Paenibacillus curdlanolyticus YK9] Length = 234 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 + + F ++T + G+NG GKS+L EAI + T + + + ++ Sbjct: 28 KSLTFTKNVTCLVGENGSGKSTLLEAIAYQCGFNTAGGGRNNHYEVNASRS 78 >gi|196014309|ref|XP_002117014.1| hypothetical protein TRIADDRAFT_31729 [Trichoplax adhaerens] gi|190580505|gb|EDV20588.1| hypothetical protein TRIADDRAFT_31729 [Trichoplax adhaerens] Length = 248 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I++ +F + KI F ++ + G NG GKS++ I G ++ S+K Sbjct: 5 LQQIQLINFMCH-KNLKITFGKNVNFIIGNNGSGKSAIMVGIIVGLGGRSRLTNRATSMK 63 >gi|171912992|ref|ZP_02928462.1| recombination protein F [Verrucomicrobium spinosum DSM 4136] Length = 356 Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +++ FR FTE ++ T++ G+NG GK+SL EA L + R Sbjct: 1 MLLEWMQVRDFRCFTE-ARLALHPETTLLVGKNGQGKTSLLEAACVLMRLQSPRTSTRSD 59 Query: 87 IKKRSIKT 94 + + +T Sbjct: 60 LIRFGAQT 67 >gi|326577597|gb|EGE27474.1| hypothetical protein EA1_02387 [Moraxella catarrhalis O35E] Length = 458 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T + D ++ Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGATDFKVLADIQFRKD 65 Query: 92 IKTPMPMCM 100 ++ + M Sbjct: 66 LEGVNKLVM 74 >gi|326571533|gb|EGE21548.1| hypothetical protein E9S_02899 [Moraxella catarrhalis BC7] Length = 458 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T + D ++ Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGATDFKVLADIQFRKD 65 Query: 92 IKTPMPMCM 100 ++ + M Sbjct: 66 LEGVNKLVM 74 >gi|326795418|ref|YP_004313238.1| hypothetical protein Marme_2159 [Marinomonas mediterranea MMB-1] gi|326546182|gb|ADZ91402.1| hypothetical protein Marme_2159 [Marinomonas mediterranea MMB-1] Length = 1146 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T + G G GKSSL +AI+ + G ++R + Sbjct: 23 RGNTAIIGPTGSGKSSLLDAIQTVLTGASKRHLN 56 >gi|310286454|ref|YP_003937715.1| hypothetical protein ETN48_p0120 [Escherichia coli] gi|308826783|emb|CBX36047.1| conserved protein of unknown function, IbfA protein [Escherichia coli] Length = 518 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 L I+I+ + + +I F H LT + G NG GKS++ AI Sbjct: 14 LNSIKINKLKCINGLNEIIFKPHALTAILGPNGSGKSTILHAI 56 >gi|296112707|ref|YP_003626645.1| hypothetical protein MCR_0480 [Moraxella catarrhalis RH4] gi|295920401|gb|ADG60752.1| hypothetical protein MCR_0480 [Moraxella catarrhalis RH4] Length = 458 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ G T + D ++ Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRGATDFKVLADIQFRKD 65 Query: 92 IKTPMPMCM 100 ++ + M Sbjct: 66 LEGVNKLVM 74 >gi|262039567|ref|ZP_06012866.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] gi|261746445|gb|EEY33985.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] Length = 667 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 13/58 (22%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFAD------------HLTIVNGQNGYGKSSLSEAIE 71 L I+I++FR F E K+EF + + T++ G+N GK+++ A+E Sbjct: 1 MFLKSIKINNFRKFRKEGNKVEFTNSKNYQTNVNVASNTTLIVGKNNSGKTTIINALE 58 >gi|227822792|ref|YP_002826764.1| hypothetical protein NGR_c22510 [Sinorhizobium fredii NGR234] gi|227341793|gb|ACP26011.1| hypothetical protein NGR_c22510 [Sinorhizobium fredii NGR234] Length = 562 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 20/31 (64%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+EF LT++ G+NG GKSSL + I W Sbjct: 21 KVEFHPLLTVITGENGVGKSSLIKHIYWTLG 51 >gi|227115563|ref|ZP_03829219.1| hypothetical protein PcarbP_21528 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 728 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 32 IEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLS 67 + ++ R + E +F++ +T++ GQNG GKS++S Sbjct: 4 LSVNGVRSYRSSEPVVFDFSNPVTMIYGQNGAGKSTIS 41 >gi|123493702|ref|XP_001326352.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121909265|gb|EAY14129.1| SMC family, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1084 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ I++ F F E I+ L ++ G NG GKS++ A+ Sbjct: 33 IMSIKLKDFMTF-EKITIQPGAGLNLIIGPNGSGKSTIVCAV 73 >gi|152996245|ref|YP_001341080.1| hypothetical protein Mmwyl1_2223 [Marinomonas sp. MWYL1] gi|150837169|gb|ABR71145.1| conserved hypothetical protein [Marinomonas sp. MWYL1] Length = 1138 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T + G G GKSSL +AI+ + G ++R + Sbjct: 23 RGNTAIIGPTGSGKSSLLDAIQTVLTGASKRHLN 56 >gi|49473790|ref|YP_031832.1| recombination protein F [Bartonella quintana str. Toulouse] gi|49239293|emb|CAF25619.1| DNA replication and repair protein recF [Bartonella quintana str. Toulouse] Length = 377 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + + +R ++ I F+ + G NG GK++L EA+ +L G RR Sbjct: 8 VTVRQLRLVRYRNYSSFN-IHFSGQHVVFTGHNGAGKTNLLEALSFLSPGRGLRR 61 >gi|32470166|ref|NP_863390.1| hypothetical protein R64_p035 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|170650802|ref|YP_001740025.1| hypothetical protein EcSMS35_A0145 [Escherichia coli SMS-3-5] gi|221218566|ref|YP_002527524.1| hypothetical protein pO103_69 [Escherichia coli] gi|300904871|ref|ZP_07122694.1| hypothetical protein HMPREF9536_02939 [Escherichia coli MS 84-1] gi|301305688|ref|ZP_07211776.1| hypothetical protein HMPREF9347_04307 [Escherichia coli MS 124-1] gi|20521534|dbj|BAB91598.1| ibfA [Salmonella enterica subsp. enterica serovar Typhimurium] gi|31075365|gb|AAP42484.1| unknown [Escherichia coli] gi|170522078|gb|ACB20255.1| conserved hypothetical protein [Escherichia coli SMS-3-5] gi|215252894|gb|ACJ63553.1| conserved hypothetical protein [Escherichia coli] gi|300403204|gb|EFJ86742.1| hypothetical protein HMPREF9536_02939 [Escherichia coli MS 84-1] gi|300839028|gb|EFK66788.1| hypothetical protein HMPREF9347_04307 [Escherichia coli MS 124-1] gi|312949062|gb|ADR29888.1| conserved hypothetical protein [Escherichia coli O83:H1 str. NRG 857C] gi|315253172|gb|EFU33140.1| conserved hypothetical protein [Escherichia coli MS 85-1] Length = 518 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 L I+I+ + + +I F H LT + G NG GKS++ AI Sbjct: 14 LNSIKINKLKCINGLNEIIFKPHALTAILGPNGSGKSTILHAI 56 >gi|87119928|ref|ZP_01075824.1| hypothetical protein MED121_01770 [Marinomonas sp. MED121] gi|86164630|gb|EAQ65899.1| hypothetical protein MED121_01770 [Marinomonas sp. MED121] Length = 1137 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T + G G GKSSL +AI+ + G ++R + Sbjct: 23 RGNTAIIGPTGSGKSSLLDAIQTVLTGASKRHLN 56 >gi|194337510|ref|YP_002019304.1| hypothetical protein Ppha_2512 [Pelodictyon phaeoclathratiforme BU-1] gi|194309987|gb|ACF44687.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme BU-1] Length = 378 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I+ ++ E+++ E D L I+ G NG GKS+L + + L + + Sbjct: 5 IRKISINGYKSIRELKEFELRD-LNIIIGANGSGKSNLVQ-VFQLLMAMSGKGMQK 58 >gi|325190125|emb|CCA24606.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1083 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|325190123|emb|CCA24604.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1061 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|224476901|ref|YP_002634507.1| hypothetical protein Sca_1417 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421508|emb|CAL28322.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 977 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ ++I + F E KI+F + LT + G+N GKS++ I + +G+ +R++ Sbjct: 1 MRIKALDIYGYGKFVER-KIQFNNSLTEIFGENEAGKSTIQAFIHSILFGFPTKREN 56 >gi|213961968|ref|ZP_03390233.1| RecF protein [Capnocytophaga sputigena Capno] gi|213955321|gb|EEB66638.1| RecF protein [Capnocytophaga sputigena Capno] Length = 360 Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L I + +++ Q F+ + G NG GK++L +AI Sbjct: 1 MFLKQISVVNYKNIPS-QTYAFSPTINCFVGDNGVGKTNLLDAI 43 >gi|312866121|ref|ZP_07726342.1| exonuclease SbcCD, C subunit [Streptococcus downei F0415] gi|311098525|gb|EFQ56748.1| exonuclease SbcCD, C subunit [Streptococcus downei F0415] Length = 1067 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFY--GYTQR 80 + + IE+++F + + ++F+ +L +++G+ G GKSS+ +A+ + Y + R Sbjct: 1 MRPIRIEMTNFGPYR-QEILDFSRLDESNLFLISGRTGAGKSSIFDAMTYALYDKTSSDR 59 Query: 81 RKHGDSIKKRSIKTPM 96 + S+K P Sbjct: 60 PVNELRSTFASLKDPR 75 >gi|209526893|ref|ZP_03275412.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209492672|gb|EDZ93008.1| conserved hypothetical protein [Arthrospira maxima CS-328] Length = 661 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Query: 30 LDIEISHFRGFTEIQKIEFADHLT--------IVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F + Q I +T ++ G NG GK++L +A+ +FYG + Sbjct: 4 LELTLQNFGPYRGKQVINLRPQMTGETVSPIVLLGGMNGGGKTTLMDAMRLVFYGARAQ 62 >gi|229586425|ref|YP_002844926.1| DNA repair protein RecN [Rickettsia africae ESF-5] gi|228021475|gb|ACP53183.1| DNA repair protein RecN [Rickettsia africae ESF-5] Length = 545 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|165932810|ref|YP_001649599.1| DNA repair protein [Rickettsia rickettsii str. Iowa] gi|165907897|gb|ABY72193.1| DNA repair protein [Rickettsia rickettsii str. Iowa] Length = 545 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|156393368|ref|XP_001636300.1| predicted protein [Nematostella vectensis] gi|156223402|gb|EDO44237.1| predicted protein [Nematostella vectensis] Length = 134 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKS 64 + +++ R ++ ++ IEF LT++ G NG GK+ Sbjct: 4 IEKMQVCGIRSYSHQERCVIEFQKPLTLIVGHNGAGKT 41 >gi|149246598|ref|XP_001527727.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447681|gb|EDK42069.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1073 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 L I++ +F ++ + + L ++ G NG GKS+L AI G +RK+ S Sbjct: 26 LRSIKVWNFTTYS-YTEFVLSPTLNMIIGPNGSGKSTLVAAICIGLAGKIDLIKRKNLKS 84 Query: 87 IKKRSIKTPM 96 I K + Sbjct: 85 IIKTGQERAK 94 >gi|82701255|ref|YP_410821.1| ATP-dependent OLD family endonuclease [Nitrosospira multiformis ATCC 25196] gi|82409320|gb|ABB73429.1| ATP-dependent endonuclease of the OLD family-like protein [Nitrosospira multiformis ATCC 25196] Length = 429 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I + +R F I+F LT++ G NG GK++L + Sbjct: 3 KKIVLHGWRQFR-NVDIDFHPRLTVLTGANGAGKTTLLNLV 42 >gi|325190120|emb|CCA24601.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1063 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|319441708|ref|ZP_07990864.1| hypothetical protein CvarD4_08067 [Corynebacterium variabile DSM 44702] Length = 1116 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 25/39 (64%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 D+++ ++ G+ ++ F+ T++ G +G GKS+L +A Sbjct: 24 DLQLVNWGGYDGAHRVRFSPSATLLCGGSGSGKSTLMDA 62 >gi|319784114|ref|YP_004143590.1| ATPase AAA [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170002|gb|ADV13540.1| AAA ATPase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 260 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 FRG ++EF +TI+ G+NG GKS+L EAI GY + Sbjct: 38 FRGH--DFELEFTTPITIIVGENGTGKSTLLEAIG-ALAGYDEAGGGKGY 84 >gi|300721763|ref|YP_003711041.1| ATP-dependent dsDNA exonuclease [Xenorhabdus nematophila ATCC 19061] gi|297628258|emb|CBJ88817.1| ATP-dependent dsDNA exonuclease [Xenorhabdus nematophila ATCC 19061] Length = 1226 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+F ++ L + G G GK+SL +AI Y T R Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTTEPFASNGLFAITGSTGAGKTSLLDAICLALYHETPR 60 >gi|195378470|ref|XP_002048007.1| GJ11591 [Drosophila virilis] gi|194155165|gb|EDW70349.1| GJ11591 [Drosophila virilis] Length = 1035 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I ++ + F ++EI ++L ++ G NG GKS++ AI G Q Sbjct: 13 IGRIQSVYCKDFVSYSEITYFP-KEYLNVLTGPNGTGKSTIVSAIILGLGGDPQLLDRSS 71 Query: 86 SIKK 89 SI Sbjct: 72 SISD 75 >gi|193215680|ref|YP_001996879.1| DNA repair protein RecN [Chloroherpeton thalassium ATCC 35110] gi|193089157|gb|ACF14432.1| DNA repair protein RecN [Chloroherpeton thalassium ATCC 35110] Length = 573 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY----TQRRKHG 84 L + I +F E IEF L I+ G+ G GKS L A+ + R+ Sbjct: 2 LKTLYIKNF-ALIEELSIEFNSGLNIITGETGAGKSILIGALSLVLGERGSVDVIRKGED 60 Query: 85 DSIKKRSIK 93 +I + I Sbjct: 61 KAIIECIID 69 >gi|15922571|ref|NP_378240.1| hypothetical protein ST2240 [Sulfolobus tokodaii str. 7] gi|15623361|dbj|BAB67349.1| 494aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 494 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+++ + +FR + I+ + L ++ G NGYGK++L AI +LF S Sbjct: 1 MKIINFYVDNFRSLSNIRLEDLG-GLNVIVGYNGYGKTNLLTAI-YLFIKNLNAGIEKRS 58 Query: 87 IKKRSIK 93 I+ R + Sbjct: 59 IEDRDQE 65 >gi|325190124|emb|CCA24605.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1075 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|325190121|emb|CCA24602.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1097 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|313159177|gb|EFR58550.1| DNA replication and repair protein RecF [Alistipes sp. HGB5] Length = 448 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L I + +F+ E ++ + + G NG GK+++ +A+ +L Sbjct: 1 MFLKKISLLNFKNI-EQAELALCRGVNCLVGDNGAGKTNVIDAVYYL 46 >gi|296133489|ref|YP_003640736.1| hypothetical protein TherJR_1988 [Thermincola sp. JR] gi|296032067|gb|ADG82835.1| conserved hypothetical protein [Thermincola potens JR] Length = 823 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L ++ I+ F G Q F++ IV G N GK++L AI + YG+ R Sbjct: 1 MRLKEVHITGF-GKLVNQAFRFSESFHIVKGLNEAGKTTLVNAILGILYGFKGRS 54 >gi|158335908|ref|YP_001517082.1| DNA repair protein RecN [Acaryochloris marina MBIC11017] gi|158306149|gb|ABW27766.1| DNA repair protein RecN [Acaryochloris marina MBIC11017] Length = 594 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + + F D L ++ G+ G GKS L +AI+ + G Sbjct: 2 LLSLRIENF-ALIDTLDLTFTDGLNVLTGETGAGKSILLDAIDLILGGKALSSM 54 >gi|15892152|ref|NP_359866.1| DNA repair protein RecN [Rickettsia conorii str. Malish 7] gi|20139553|sp|Q92J40|RECN_RICCN RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|15619282|gb|AAL02767.1| DNA repair protein RecN [Rickettsia conorii str. Malish 7] Length = 545 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|119385560|ref|YP_916615.1| recombination protein F [Paracoccus denitrificans PD1222] gi|119376155|gb|ABL70919.1| DNA replication and repair protein RecF [Paracoccus denitrificans PD1222] Length = 358 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++ FR + +IE ++G NG GK+++ EA+ L G R G + Sbjct: 1 MTLSLLHLTQFRSWA-RLEIEADHRPVAIHGPNGAGKTNILEAVSMLSPG---RGMRGAA 56 Query: 87 IKKRSIKTP 95 ++ K P Sbjct: 57 PGDQARKGP 65 >gi|323356607|ref|YP_004223003.1| hypothetical protein MTES_0159 [Microbacterium testaceum StLB037] gi|323272978|dbj|BAJ73123.1| uncharacterized protein conserved in bacteria [Microbacterium testaceum StLB037] Length = 1117 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 25/40 (62%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 D+++ ++ G+ ++ FA T++ G +G GKS+L +A Sbjct: 23 EDLQLINWGGYDGTHRVRFAPTATLLCGGSGSGKSTLMDA 62 >gi|320014244|gb|ADV97815.1| recombination and repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 553 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 50 >gi|239906244|ref|YP_002952984.1| hypothetical protein DMR_16070 [Desulfovibrio magneticus RS-1] gi|239796109|dbj|BAH75098.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 395 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ I + +F+ F + + + ++ G NG GKS++ + +L Sbjct: 1 MKIESIRLRNFKSFQDAELSDL-PSFCVIVGANGTGKSTIFQVFGFL 46 >gi|227504627|ref|ZP_03934676.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium striatum ATCC 6940] gi|227198782|gb|EEI78830.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium striatum ATCC 6940] Length = 239 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 EF +T + G+NG GKS+L EAI ++ D ++R+ Sbjct: 32 FEFTAPVTCLVGENGAGKSTLLEAIAVALRFSPLGGRYDDPDRERA 77 >gi|195592192|ref|XP_002085820.1| GD14975 [Drosophila simulans] gi|194197829|gb|EDX11405.1| GD14975 [Drosophila simulans] Length = 1034 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|186894536|ref|YP_001871648.1| recombination and repair protein [Yersinia pseudotuberculosis PB1/+] gi|186697562|gb|ACC88191.1| DNA repair protein RecN [Yersinia pseudotuberculosis PB1/+] Length = 553 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 50 >gi|218781556|ref|YP_002432874.1| DNA repair protein RecN [Desulfatibacillum alkenivorans AK-01] gi|218762940|gb|ACL05406.1| DNA repair protein RecN [Desulfatibacillum alkenivorans AK-01] Length = 568 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ I +F + + F+D LT + G+ G GKS L A+ L Sbjct: 2 LAELSIKNF-AIIDDLSVRFSDGLTAITGETGAGKSILINAVNLLLG 47 >gi|86355801|ref|YP_467693.1| recombination protein F [Rhizobium etli CFN 42] gi|123738428|sp|Q2KDX0|RECF_RHIEC RecName: Full=DNA replication and repair protein recF gi|86279903|gb|ABC88966.1| DNA replication and repair protein [Rhizobium etli CFN 42] Length = 374 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + + ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYAA-ASLSLDGRHAVLTGDNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|22126951|ref|NP_670374.1| recombination and repair protein [Yersinia pestis KIM 10] gi|45440885|ref|NP_992424.1| recombination and repair protein [Yersinia pestis biovar Microtus str. 91001] gi|21959992|gb|AAM86625.1|AE013908_8 DNA repair protein [Yersinia pestis KIM 10] gi|45435743|gb|AAS61301.1| DNA repair protein RecN [Yersinia pestis biovar Microtus str. 91001] Length = 589 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 38 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 86 >gi|51595483|ref|YP_069674.1| recombination and repair protein [Yersinia pseudotuberculosis IP 32953] gi|51588765|emb|CAH20379.1| DNA repair protein RecN [Yersinia pseudotuberculosis IP 32953] Length = 559 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 8 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 56 >gi|218928273|ref|YP_002346148.1| recombination and repair protein [Yersinia pestis CO92] gi|115346884|emb|CAL19771.1| DNA repair protein RecN [Yersinia pestis CO92] Length = 559 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 8 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 56 >gi|108806580|ref|YP_650496.1| recombination and repair protein [Yersinia pestis Antiqua] gi|108813053|ref|YP_648820.1| recombination and repair protein [Yersinia pestis Nepal516] gi|145599857|ref|YP_001163933.1| recombination and repair protein [Yersinia pestis Pestoides F] gi|149366895|ref|ZP_01888929.1| DNA repair protein [Yersinia pestis CA88-4125] gi|162421663|ref|YP_001605902.1| recombination and repair protein [Yersinia pestis Angola] gi|165924417|ref|ZP_02220249.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. F1991016] gi|165938354|ref|ZP_02226912.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. IP275] gi|166011545|ref|ZP_02232443.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. E1979001] gi|166211364|ref|ZP_02237399.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. B42003004] gi|167399718|ref|ZP_02305236.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419655|ref|ZP_02311408.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424294|ref|ZP_02316047.1| DNA repair protein RecN [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025198|ref|YP_001721703.1| recombination and repair protein [Yersinia pseudotuberculosis YPIII] gi|229841040|ref|ZP_04461199.1| recombination and repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843144|ref|ZP_04463290.1| recombination and repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229893982|ref|ZP_04509168.1| recombination and repair protein [Yersinia pestis Pestoides A] gi|229903494|ref|ZP_04518607.1| recombination and repair protein [Yersinia pestis Nepal516] gi|270487276|ref|ZP_06204350.1| DNA repair protein RecN [Yersinia pestis KIM D27] gi|294503113|ref|YP_003567175.1| DNA repair protein RecN [Yersinia pestis Z176003] gi|108776701|gb|ABG19220.1| DNA repair protein RecN [Yersinia pestis Nepal516] gi|108778493|gb|ABG12551.1| DNA repair protein RecN [Yersinia pestis Antiqua] gi|145211553|gb|ABP40960.1| DNA repair protein RecN [Yersinia pestis Pestoides F] gi|149291269|gb|EDM41344.1| DNA repair protein [Yersinia pestis CA88-4125] gi|162354478|gb|ABX88426.1| DNA repair protein RecN [Yersinia pestis Angola] gi|165913732|gb|EDR32351.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. IP275] gi|165923477|gb|EDR40609.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. F1991016] gi|165989493|gb|EDR41794.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. E1979001] gi|166207135|gb|EDR51615.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. B42003004] gi|166962396|gb|EDR58417.1| DNA repair protein RecN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050426|gb|EDR61834.1| DNA repair protein RecN [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057143|gb|EDR66906.1| DNA repair protein RecN [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751732|gb|ACA69250.1| DNA repair protein RecN [Yersinia pseudotuberculosis YPIII] gi|229679264|gb|EEO75367.1| recombination and repair protein [Yersinia pestis Nepal516] gi|229689491|gb|EEO81552.1| recombination and repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697406|gb|EEO87453.1| recombination and repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703867|gb|EEO90880.1| recombination and repair protein [Yersinia pestis Pestoides A] gi|262361149|gb|ACY57870.1| DNA repair protein RecN [Yersinia pestis D106004] gi|262365297|gb|ACY61854.1| DNA repair protein RecN [Yersinia pestis D182038] gi|270335780|gb|EFA46557.1| DNA repair protein RecN [Yersinia pestis KIM D27] gi|294353572|gb|ADE63913.1| DNA repair protein RecN [Yersinia pestis Z176003] Length = 553 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 50 >gi|153950325|ref|YP_001401852.1| recombination and repair protein [Yersinia pseudotuberculosis IP 31758] gi|152961820|gb|ABS49281.1| DNA repair protein RecN [Yersinia pseudotuberculosis IP 31758] Length = 553 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L+ + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LVQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAVDALGLCLGNRS 50 >gi|68485641|ref|XP_713303.1| potential nuclear DNA repair complex SMC ATPase [Candida albicans SC5314] gi|68485744|ref|XP_713250.1| potential nuclear DNA repair complex SMC ATPase [Candida albicans SC5314] gi|46434731|gb|EAK94133.1| potential nuclear DNA repair complex SMC ATPase [Candida albicans SC5314] gi|46434785|gb|EAK94186.1| potential nuclear DNA repair complex SMC ATPase [Candida albicans SC5314] gi|238879771|gb|EEQ43409.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1073 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 + + + +F ++ + + L ++ G NG GKS+L +I G +RK+ S Sbjct: 26 IRKVRVWNFTTYS-YTEFNLSPTLNMIIGPNGSGKSTLVASICIGLAGSINLIKRKNLKS 84 Query: 87 IKKRSIK 93 + K + Sbjct: 85 MIKTGQE 91 >gi|34580818|ref|ZP_00142298.1| DNA repair protein RecN [Rickettsia sibirica 246] gi|28262203|gb|EAA25707.1| DNA repair protein RecN [Rickettsia sibirica 246] Length = 545 Score = 40.7 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 54 >gi|332701729|ref|ZP_08421817.1| DNA repair ATPase-like protein [Desulfovibrio africanus str. Walvis Bay] gi|332551878|gb|EGJ48922.1| DNA repair ATPase-like protein [Desulfovibrio africanus str. Walvis Bay] Length = 458 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + + +F +E LT++ G N GKS++ E + R Sbjct: 2 LVKLTLENFLAHG-RTVVELGPGLTVLVGPNNSGKSAVVEGLR-CLATNPAPR 52 >gi|315157620|gb|EFU01637.1| DNA repair protein RecN [Enterococcus faecalis TX0312] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|315149508|gb|EFT93524.1| DNA repair protein RecN [Enterococcus faecalis TX0012] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|315026961|gb|EFT38893.1| DNA repair protein RecN [Enterococcus faecalis TX2137] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|312904547|ref|ZP_07763705.1| DNA repair protein RecN [Enterococcus faecalis TX0635] gi|310632060|gb|EFQ15343.1| DNA repair protein RecN [Enterococcus faecalis TX0635] gi|315577399|gb|EFU89590.1| DNA repair protein RecN [Enterococcus faecalis TX0630] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|307268065|ref|ZP_07549453.1| DNA repair protein RecN [Enterococcus faecalis TX4248] gi|312900455|ref|ZP_07759762.1| DNA repair protein RecN [Enterococcus faecalis TX0470] gi|306515706|gb|EFM84233.1| DNA repair protein RecN [Enterococcus faecalis TX4248] gi|311292431|gb|EFQ70987.1| DNA repair protein RecN [Enterococcus faecalis TX0470] gi|315031729|gb|EFT43661.1| DNA repair protein RecN [Enterococcus faecalis TX0017] gi|315034214|gb|EFT46146.1| DNA repair protein RecN [Enterococcus faecalis TX0027] gi|315147936|gb|EFT91952.1| DNA repair protein RecN [Enterococcus faecalis TX4244] gi|323480224|gb|ADX79663.1| DNA repair protein RecN [Enterococcus faecalis 62] gi|329574363|gb|EGG55935.1| DNA repair protein RecN [Enterococcus faecalis TX1467] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|307271996|ref|ZP_07553263.1| DNA repair protein RecN [Enterococcus faecalis TX0855] gi|306511343|gb|EFM80346.1| DNA repair protein RecN [Enterococcus faecalis TX0855] Length = 530 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|307278964|ref|ZP_07560023.1| DNA repair protein RecN [Enterococcus faecalis TX0860] gi|306504351|gb|EFM73562.1| DNA repair protein RecN [Enterococcus faecalis TX0860] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|307289413|ref|ZP_07569367.1| DNA repair protein RecN [Enterococcus faecalis TX0109] gi|306499668|gb|EFM69031.1| DNA repair protein RecN [Enterococcus faecalis TX0109] gi|315165150|gb|EFU09167.1| DNA repair protein RecN [Enterococcus faecalis TX1302] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|301163913|emb|CBW23468.1| putative exonuclease [Bacteroides fragilis 638R] Length = 987 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|300859955|ref|ZP_07106043.1| DNA repair protein RecN [Enterococcus faecalis TUSoD Ef11] gi|300850773|gb|EFK78522.1| DNA repair protein RecN [Enterococcus faecalis TUSoD Ef11] gi|315144370|gb|EFT88386.1| DNA repair protein RecN [Enterococcus faecalis TX2141] gi|315162950|gb|EFU06967.1| DNA repair protein RecN [Enterococcus faecalis TX0645] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|295113837|emb|CBL32474.1| DNA replication and repair protein RecN [Enterococcus sp. 7L76] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|294780574|ref|ZP_06745937.1| DNA repair protein RecN [Enterococcus faecalis PC1.1] gi|294452401|gb|EFG20840.1| DNA repair protein RecN [Enterococcus faecalis PC1.1] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|265766114|ref|ZP_06094155.1| ATP-dependent exonuclease SbcC [Bacteroides sp. 2_1_16] gi|263253782|gb|EEZ25247.1| ATP-dependent exonuclease SbcC [Bacteroides sp. 2_1_16] Length = 987 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|257418575|ref|ZP_05595569.1| DNA repair protein recN [Enterococcus faecalis T11] gi|257160403|gb|EEU90363.1| DNA repair protein recN [Enterococcus faecalis T11] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|257415602|ref|ZP_05592596.1| DNA repair protein RecN [Enterococcus faecalis AR01/DG] gi|257157430|gb|EEU87390.1| DNA repair protein RecN [Enterococcus faecalis ARO1/DG] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|257089393|ref|ZP_05583754.1| DNA repair protein recN [Enterococcus faecalis CH188] gi|256998205|gb|EEU84725.1| DNA repair protein recN [Enterococcus faecalis CH188] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|257086343|ref|ZP_05580704.1| DNA repair protein RecN [Enterococcus faecalis D6] gi|256994373|gb|EEU81675.1| DNA repair protein RecN [Enterococcus faecalis D6] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|257081237|ref|ZP_05575598.1| DNA repair protein RecN [Enterococcus faecalis E1Sol] gi|256989267|gb|EEU76569.1| DNA repair protein RecN [Enterococcus faecalis E1Sol] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|256957076|ref|ZP_05561247.1| DNA repair protein RecN [Enterococcus faecalis DS5] gi|257077872|ref|ZP_05572233.1| DNA repair protein RecN [Enterococcus faecalis JH1] gi|256947572|gb|EEU64204.1| DNA repair protein RecN [Enterococcus faecalis DS5] gi|256985902|gb|EEU73204.1| DNA repair protein RecN [Enterococcus faecalis JH1] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|256852637|ref|ZP_05558008.1| DNA repair protein RecN [Enterococcus faecalis T8] gi|256711982|gb|EEU27019.1| DNA repair protein RecN [Enterococcus faecalis T8] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|256761742|ref|ZP_05502322.1| DNA repair protein RecN [Enterococcus faecalis T3] gi|256682993|gb|EEU22688.1| DNA repair protein RecN [Enterococcus faecalis T3] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|256617907|ref|ZP_05474753.1| DNA repair protein RecN [Enterococcus faecalis ATCC 4200] gi|256597434|gb|EEU16610.1| DNA repair protein RecN [Enterococcus faecalis ATCC 4200] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|255974053|ref|ZP_05424639.1| DNA repair protein RecN [Enterococcus faecalis T2] gi|255966925|gb|EET97547.1| DNA repair protein RecN [Enterococcus faecalis T2] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|255971438|ref|ZP_05422024.1| DNA repair protein RecN [Enterococcus faecalis T1] gi|256960166|ref|ZP_05564337.1| DNA repair protein RecN [Enterococcus faecalis Merz96] gi|256962591|ref|ZP_05566762.1| DNA repair protein RecN [Enterococcus faecalis HIP11704] gi|257083895|ref|ZP_05578256.1| DNA repair protein RecN [Enterococcus faecalis Fly1] gi|257421233|ref|ZP_05598223.1| DNA repair protein recN [Enterococcus faecalis X98] gi|255962456|gb|EET94932.1| DNA repair protein RecN [Enterococcus faecalis T1] gi|256950662|gb|EEU67294.1| DNA repair protein RecN [Enterococcus faecalis Merz96] gi|256953087|gb|EEU69719.1| DNA repair protein RecN [Enterococcus faecalis HIP11704] gi|256991925|gb|EEU79227.1| DNA repair protein RecN [Enterococcus faecalis Fly1] gi|257163057|gb|EEU93017.1| DNA repair protein recN [Enterococcus faecalis X98] Length = 560 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 5 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 59 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 60 QGANKCTLEGLFSMPKSQ 77 >gi|229546831|ref|ZP_04435556.1| DNA repair protein RecN [Enterococcus faecalis TX1322] gi|307290053|ref|ZP_07569977.1| DNA repair protein RecN [Enterococcus faecalis TX0411] gi|229307996|gb|EEN73983.1| DNA repair protein RecN [Enterococcus faecalis TX1322] gi|306498895|gb|EFM68389.1| DNA repair protein RecN [Enterococcus faecalis TX0411] gi|315029674|gb|EFT41606.1| DNA repair protein RecN [Enterococcus faecalis TX4000] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|229548925|ref|ZP_04437650.1| DNA repair protein RecN [Enterococcus faecalis ATCC 29200] gi|293382534|ref|ZP_06628468.1| DNA repair protein RecN [Enterococcus faecalis R712] gi|293387866|ref|ZP_06632405.1| DNA repair protein RecN [Enterococcus faecalis S613] gi|312906863|ref|ZP_07765860.1| DNA repair protein RecN [Enterococcus faecalis DAPTO 512] gi|312952743|ref|ZP_07771605.1| DNA repair protein RecN [Enterococcus faecalis TX0102] gi|312978882|ref|ZP_07790608.1| DNA repair protein RecN [Enterococcus faecalis DAPTO 516] gi|229305946|gb|EEN71942.1| DNA repair protein RecN [Enterococcus faecalis ATCC 29200] gi|291080082|gb|EFE17446.1| DNA repair protein RecN [Enterococcus faecalis R712] gi|291082713|gb|EFE19676.1| DNA repair protein RecN [Enterococcus faecalis S613] gi|310627117|gb|EFQ10400.1| DNA repair protein RecN [Enterococcus faecalis DAPTO 512] gi|310629259|gb|EFQ12542.1| DNA repair protein RecN [Enterococcus faecalis TX0102] gi|311288319|gb|EFQ66875.1| DNA repair protein RecN [Enterococcus faecalis DAPTO 516] gi|315153061|gb|EFT97077.1| DNA repair protein RecN [Enterococcus faecalis TX0031] gi|315156834|gb|EFU00851.1| DNA repair protein RecN [Enterococcus faecalis TX0043] gi|315171922|gb|EFU15939.1| DNA repair protein RecN [Enterococcus faecalis TX1342] gi|315173301|gb|EFU17318.1| DNA repair protein RecN [Enterococcus faecalis TX1346] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|227517907|ref|ZP_03947956.1| DNA repair protein RecN [Enterococcus faecalis TX0104] gi|227074661|gb|EEI12624.1| DNA repair protein RecN [Enterococcus faecalis TX0104] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|260787331|ref|XP_002588707.1| hypothetical protein BRAFLDRAFT_131216 [Branchiostoma floridae] gi|229273875|gb|EEN44718.1| hypothetical protein BRAFLDRAFT_131216 [Branchiostoma floridae] Length = 1059 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + +F ++ V G+NG GKS++ + G G SIK Sbjct: 70 IEAISLKNFMCHS-RLEFKFGPNVNFVVGKNGSGKSAVLTGLVVGLGGKATITDRGKSIK 128 >gi|29375566|ref|NP_814720.1| DNA repair protein RecN [Enterococcus faecalis V583] gi|227555094|ref|ZP_03985141.1| DNA repair protein RecN [Enterococcus faecalis HH22] gi|307275468|ref|ZP_07556610.1| DNA repair protein RecN [Enterococcus faecalis TX2134] gi|29343027|gb|AAO80790.1| DNA repair protein RecN [Enterococcus faecalis V583] gi|227175762|gb|EEI56734.1| DNA repair protein RecN [Enterococcus faecalis HH22] gi|306507856|gb|EFM76984.1| DNA repair protein RecN [Enterococcus faecalis TX2134] gi|315168049|gb|EFU12066.1| DNA repair protein RecN [Enterococcus faecalis TX1341] gi|315574271|gb|EFU86462.1| DNA repair protein RecN [Enterococcus faecalis TX0309B] gi|315581574|gb|EFU93765.1| DNA repair protein RecN [Enterococcus faecalis TX0309A] Length = 557 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + ++P+ + Sbjct: 57 QGANKCTLEGLFSMPKSQ 74 >gi|53714433|ref|YP_100425.1| ATP-dependent exonuclease SbcC [Bacteroides fragilis YCH46] gi|52217298|dbj|BAD49891.1| ATP-dependent exonuclease SbcC [Bacteroides fragilis YCH46] Length = 987 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|316975266|gb|EFV58715.1| DNA repair protein RAD50 [Trichinella spiralis] Length = 948 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Query: 34 ISHFRGFTEIQK---IEFADHLTIVNGQNGYGKS-SLSEAIEWLFYGYTQRRKHG 84 I FR F +K I+F LT++ G NG GK+ + E+ G QR+ +G Sbjct: 3 IRGFRSFGLEEKGQTIKFQKPLTLIVGSNGSGKTKNKMESR--SLDGTIQRKING 55 >gi|212693576|ref|ZP_03301704.1| hypothetical protein BACDOR_03093 [Bacteroides dorei DSM 17855] gi|212663829|gb|EEB24403.1| hypothetical protein BACDOR_03093 [Bacteroides dorei DSM 17855] Length = 521 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 11/73 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I FRGF + + E LT + GQNG KS+L I F T+ DS Sbjct: 1 MKITHIHIERFRGF-QNEDFEVGSLLTAIAGQNGTQKSTLLGIITQTFTLKTE-----DS 54 Query: 87 IKKRSIKTPMPMC 99 ++ P+C Sbjct: 55 MR-----VEKPLC 62 >gi|254413008|ref|ZP_05026780.1| hypothetical protein MC7420_2168 [Microcoleus chthonoplastes PCC 7420] gi|196180172|gb|EDX75164.1| hypothetical protein MC7420_2168 [Microcoleus chthonoplastes PCC 7420] Length = 449 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L I + +F+ F E LT++ G NG GKS++ +++ Sbjct: 2 LKKIILKNFKCFKEETDFPLG-QLTLLTGINGRGKSTMLQSL 42 >gi|195348595|ref|XP_002040834.1| GM22385 [Drosophila sechellia] gi|194122344|gb|EDW44387.1| GM22385 [Drosophila sechellia] Length = 1034 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|116334087|ref|YP_795614.1| DNA repair ATPase [Lactobacillus brevis ATCC 367] gi|116099434|gb|ABJ64583.1| DNA repair ATPase [Lactobacillus brevis ATCC 367] Length = 874 Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I F F + L + G N GKS+L++ I + +G+ ++ Sbjct: 1 MYLKTLTIYGFGHFHDRT-FTLDAGLNYLVGPNEAGKSTLTQFIVAILFGFPTKK 54 >gi|315419961|gb|ADU15839.1| RecF [Klebsiella pneumoniae] Length = 381 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|300173118|ref|YP_003772284.1| hypothetical protein LEGAS_0817 [Leuconostoc gasicomitatum LMG 18811] gi|299887497|emb|CBL91465.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG 18811] Length = 788 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I+IS F G +K +F + L +V GQN GKS+L I + +G+ ++ Sbjct: 1 MKIKQIDISGF-GRWSQKKFDFVNDLQVVAGQNESGKSTLRAFIVGILFGFPSKK 54 >gi|294636958|ref|ZP_06715281.1| RecF protein [Edwardsiella tarda ATCC 23685] gi|291089827|gb|EFE22388.1| RecF protein [Edwardsiella tarda ATCC 23685] Length = 556 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+ FRG I +I + D T++ G+N +GKSSL +A+ Sbjct: 1 MYLERIEVVGFRG---INRISLSLDENTVLIGENAWGKSSLLDALTLCL 46 >gi|238894635|ref|YP_002919369.1| RecF/RecN/SMC domain protein [Klebsiella pneumoniae NTUH-K2044] gi|238546951|dbj|BAH63302.1| RecF/RecN/SMC domain protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 381 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|190576910|ref|YP_001966242.1| putative RecF protein [Klebsiella pneumoniae] gi|110264494|gb|ABG56857.1| putative RecF protein [Klebsiella pneumoniae] Length = 252 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 14 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 68 >gi|88603012|ref|YP_503190.1| ATPase [Methanospirillum hungatei JF-1] gi|88188474|gb|ABD41471.1| ATPase [Methanospirillum hungatei JF-1] Length = 515 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +L + I + RG +I I F ++++ G N GK+++ A+ Y R + Sbjct: 23 RLEQVRIQNIRGIVDI-SIRFPYPVSVLAGPNACGKTTVLHALG-CLYINKLGRSFTPAK 80 Query: 88 KKRSIKTPMP 97 KT P Sbjct: 81 LFPDFKTKNP 90 >gi|12034665|gb|AAG45955.1|AF282921_1 putative RecF protein [Shigella flexneri] Length = 284 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|46254789|gb|AAS86326.1| putative RecF [Klebsiella pneumoniae] Length = 210 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|33240152|ref|NP_875094.1| ATPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237679|gb|AAP99746.1| ATPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 904 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L+ +I + + ++ + F+ +T++ G+N GKS+L EAI Sbjct: 1 MRLVKCQIKNVKTHDDLT-VNFSPKITLIGGRNETGKSTLIEAI 43 >gi|32470073|ref|NP_863015.1| putative RecF protein [Escherichia coli] gi|134044814|ref|YP_001102240.1| RecF/RecN/SMC domain-containing protein [Yersinia pestis biovar Orientalis str. IP275] gi|28629330|gb|AAO49610.1| putative RecF protein [Escherichia coli] gi|44443465|gb|AAS47047.1| hypothetical protein-like protein [Enterobacter cloacae] gi|133905348|gb|ABO42110.1| RecF/RecN/SMC domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|259089726|gb|ACV91689.1| RecF/RecN/SMC N-terminal domain protein [Klebsiella pneumoniae] gi|259089735|gb|ACV91697.1| RecF/RecN/SMC N-terminal domain protein [Klebsiella pneumoniae] Length = 381 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|332874201|ref|ZP_08442124.1| hypothetical protein HMPREF0022_01737 [Acinetobacter baumannii 6014059] gi|332737623|gb|EGJ68527.1| hypothetical protein HMPREF0022_01737 [Acinetobacter baumannii 6014059] Length = 349 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 I +L I+++HFRG I+ I D LT++ G+NG KS++ Sbjct: 5 ITQLKKIKVNHFRGLKNIE-INLGDRLTVICGKNGTSKSTIL 45 >gi|317494669|ref|ZP_07953081.1| DNA replication and repair protein RecF [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917271|gb|EFV38618.1| DNA replication and repair protein RecF [Enterobacteriaceae bacterium 9_2_54FAA] Length = 358 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + A+ + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLTIRDFRNI-ESADLAPAEGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|169827924|ref|YP_001698082.1| hypothetical protein Bsph_2399 [Lysinibacillus sphaericus C3-41] gi|168992412|gb|ACA39952.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 242 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++Q++EF ++T G+NG GKS+L EAI Sbjct: 22 NIPSLQDLQELEFPTNVTFFVGENGSGKSTLLEAI 56 >gi|126650843|ref|ZP_01723059.1| hypothetical protein BB14905_05013 [Bacillus sp. B14905] gi|126592508|gb|EAZ86526.1| hypothetical protein BB14905_05013 [Bacillus sp. B14905] Length = 225 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++Q++EF ++T G+NG GKS+L EAI Sbjct: 5 NIPSLQDLQELEFPTNVTFFVGENGSGKSTLLEAI 39 >gi|124023035|ref|YP_001017342.1| RecF protein:ABC transporter [Prochlorococcus marinus str. MIT 9303] gi|123963321|gb|ABM78077.1| RecF protein:ABC transporter [Prochlorococcus marinus str. MIT 9303] Length = 918 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +LL + + R + I+F+ LT+++G N GKSSL EA+ Sbjct: 1 MRLLHCHLENIRRHW-LLDIDFSPGLTLISGANESGKSSLVEAM 43 >gi|50914594|ref|YP_060566.1| hypothetical protein M6_Spy1248 [Streptococcus pyogenes MGAS10394] gi|50903668|gb|AAT87383.1| RecN [Streptococcus pyogenes MGAS10394] Length = 554 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + Sbjct: 1 MMLLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEV 55 Query: 87 IKKRSIKTPMP 97 I++ + K + Sbjct: 56 IRRGANKAEIE 66 >gi|71903829|ref|YP_280632.1| DNA repair protein [Streptococcus pyogenes MGAS6180] gi|94990753|ref|YP_598853.1| DNA repair protein recN [Streptococcus pyogenes MGAS10270] gi|71802924|gb|AAX72277.1| DNA repair protein [Streptococcus pyogenes MGAS6180] gi|94544261|gb|ABF34309.1| DNA repair protein recN [Streptococcus pyogenes MGAS10270] Length = 554 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + Sbjct: 1 MMLLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEV 55 Query: 87 IKKRSIKTPMP 97 I++ + K + Sbjct: 56 IRRGANKAEIE 66 >gi|152964243|ref|YP_001360027.1| hypothetical protein Krad_0273 [Kineococcus radiotolerans SRS30216] gi|151358760|gb|ABS01763.1| conserved hypothetical protein [Kineococcus radiotolerans SRS30216] Length = 1146 Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +++ ++ GF +I+F T+V G +G GKS+ +A + T Sbjct: 26 VSHVQMVNWGGFDGHHRIDFDPRATLVTGASGTGKSTALDAYIAVMMNTTAA 77 >gi|330995529|ref|ZP_08319432.1| DNA replication and repair protein RecF [Paraprevotella xylaniphila YIT 11841] gi|329575309|gb|EGG56854.1| DNA replication and repair protein RecF [Paraprevotella xylaniphila YIT 11841] Length = 365 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I + +++ + + + F+ + G NG GK++L +A+ +L + + Sbjct: 3 LKKISVLNYKNIAQAE-LAFSPKMNCFIGHNGEGKTNLLDAVYFLSFCKSATHSVDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHGED 66 >gi|323692284|ref|ZP_08106524.1| hypothetical protein HMPREF9475_01387 [Clostridium symbiosum WAL-14673] gi|323503659|gb|EGB19481.1| hypothetical protein HMPREF9475_01387 [Clostridium symbiosum WAL-14673] Length = 1123 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R+ L I ++++ + + + F++ + G +G GKS++ +A++ + Y T R Sbjct: 9 RERFVALSRICLNNWH-YISRKTLSFSEEINFFTGHSGSGKSTVIDAMQIVLYANTDGRG 67 >gi|323487561|ref|ZP_08092853.1| hypothetical protein HMPREF9474_04604 [Clostridium symbiosum WAL-14163] gi|323399118|gb|EGA91524.1| hypothetical protein HMPREF9474_04604 [Clostridium symbiosum WAL-14163] Length = 1123 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R+ L I ++++ + + + F++ + G +G GKS++ +A++ + Y T R Sbjct: 9 RERFVALSRICLNNWH-YISRKTLSFSEEINFFTGHSGSGKSTVIDAMQIVLYANTDGRG 67 >gi|260439245|ref|ZP_05793061.1| hypothetical protein BUTYVIB_02331 [Butyrivibrio crossotus DSM 2876] gi|292808259|gb|EFF67464.1| hypothetical protein BUTYVIB_02331 [Butyrivibrio crossotus DSM 2876] Length = 881 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL+ EI +F G EF D +NG+GKS+L+ I+ + YG+ R + Sbjct: 1 MKLIRCEIQNF-GKIRKGTYEFKDGCNAFCERNGWGKSTLAAFIKIMLYGFENERTRSE 58 >gi|253564930|ref|ZP_04842386.1| ATP-dependent exonuclease SbcC [Bacteroides sp. 3_2_5] gi|251946395|gb|EES86772.1| ATP-dependent exonuclease SbcC [Bacteroides sp. 3_2_5] Length = 987 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|237716519|ref|ZP_04547000.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405298|ref|ZP_06081848.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643157|ref|ZP_06720987.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294810546|ref|ZP_06769198.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|301308334|ref|ZP_07214288.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Bacteroides sp. 20_3] gi|229442502|gb|EEO48293.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356173|gb|EEZ05263.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641502|gb|EFF59690.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294442207|gb|EFG11022.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|300833804|gb|EFK64420.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Bacteroides sp. 20_3] Length = 296 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+ I I FRGF + + E LT + GQNG KS+L Sbjct: 1 MKITHIHIERFRGF-QNEDFEVGSQLTAIAGQNGTQKSTLL 40 >gi|229170847|ref|ZP_04298454.1| ATPase involved in DNA repair [Bacillus cereus AH621] gi|228612620|gb|EEK69836.1| ATPase involved in DNA repair [Bacillus cereus AH621] Length = 182 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 F + +T ++ NG GKSS+ EAI W+ YG Sbjct: 3 FGE-ITTISDPNGAGKSSIGEAITWVLYG 30 >gi|49481911|gb|AAT66667.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A59] Length = 573 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E I F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSISFEQGLTVLTGETGAGKSIIIDAIYLLIGG 48 >gi|60682451|ref|YP_212595.1| putative exonuclease [Bacteroides fragilis NCTC 9343] gi|60493885|emb|CAH08676.1| putative exonuclease [Bacteroides fragilis NCTC 9343] Length = 987 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +I+F + + ++G G GKS++ +A+ Y T R Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 >gi|89074799|ref|ZP_01161253.1| hypothetical protein SKA34_09458 [Photobacterium sp. SKA34] gi|89049374|gb|EAR54936.1| hypothetical protein SKA34_09458 [Photobacterium sp. SKA34] Length = 246 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 YARKLIFKLLDIEISHFRGF-----TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 Y R++ K I+ + F E+ IEF +T G+NG GKS+L EAI Sbjct: 8 YLREIELKREKIDSYNQFPFCIPAIKELDVIEFHPDVTFFVGENGAGKSTLIEAIAVAMG 67 >gi|325190126|emb|CCA24607.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1077 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|325190122|emb|CCA24603.1| structural maintenance of chromosomes protein 5 puta [Albugo laibachii Nc14] Length = 1099 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +F + + EF L ++ G NG GKSS+ A+ G T+ D Sbjct: 23 IYRVKLHNFLTYNDA---EFHPGPRLNLILGPNGTGKSSVVCALCVGLGGSTKVLGRADK 79 Query: 87 I 87 + Sbjct: 80 V 80 >gi|307611209|emb|CBX00857.1| putative RecF/RecN/SMC N-terminal domain protein [Legionella pneumophila 130b] Length = 366 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ I I F+ + + D L ++ G NG GKS+ E + ++R Sbjct: 3 KISSITIKGFKSILSLDQFALND-LNVLIGANGSGKSNFVSYFE-MLGELIEQRLQ 56 >gi|262373213|ref|ZP_06066492.1| ATP-dependent dsDNA exonuclease [Acinetobacter junii SH205] gi|262313238|gb|EEY94323.1| ATP-dependent dsDNA exonuclease [Acinetobacter junii SH205] Length = 1198 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRLKNLASLAGEHFIDFESEPLAHAGLIAIIGKTGAGKSTILDAMCLALFNQIPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKGSD 65 >gi|227903364|ref|ZP_04021169.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC 4796] gi|227868840|gb|EEJ76261.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC 4796] Length = 156 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 23/41 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + D+ I +R F + IE + HLT + G NG GKS++ Sbjct: 1 MWIKDLNIKDYRAFQKETNIELSKHLTAIAGMNGVGKSTIL 41 >gi|190895190|ref|YP_001985483.1| hypothetical protein RHECIAT_PC0000863 [Rhizobium etli CIAT 652] gi|190700851|gb|ACE94933.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 572 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +EI++FR +++ + + + G GKS++ +AI+ +R Sbjct: 7 LEIANFRAIRKLRWLP-GPGVNCLVGPGDSGKSTILDAIDLCLG--ARRSLTFTDADFHG 63 Query: 92 IKTPMPMCMAV 102 + P+ +++ Sbjct: 64 VDFDQPIRISI 74 >gi|157964247|ref|YP_001499071.1| DNA repair protein RecN [Rickettsia massiliae MTU5] gi|157844023|gb|ABV84524.1| DNA repair protein RecN [Rickettsia massiliae MTU5] Length = 549 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +F + +IEF L ++ G+ G GKS L +AI + T Sbjct: 8 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNI 58 >gi|225157041|ref|ZP_03724980.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224802769|gb|EEG21020.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 556 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 12/81 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-----LT------IVNGQNGYGKSSLSEAIEWLFY 75 +L IE+ +R F +I A H +T ++ G+NG GKSS+ +A+ L Sbjct: 8 LRLAAIELCGYRAFPHRVRIPLASHDREGHITGKGKDLLLYGENGSGKSSIGKALRDLLD 67 Query: 76 GYTQRRKHGDSIKKRSIKTPM 96 + R D K R P Sbjct: 68 FRS-RAVAFDDFKYRYTDPPR 87 >gi|318041988|ref|ZP_07973944.1| putative DNA repair ATPase [Synechococcus sp. CB0101] Length = 910 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L+ + + R ++ + F LT++ G N GKS+L EA+ + G Sbjct: 1 MRLIACTLQNVRRHRALE-LHFGRQLTLIAGANESGKSTLVEALHKALFLRATATGRG 57 >gi|261819373|ref|YP_003257479.1| recombination protein F [Pectobacterium wasabiae WPP163] gi|261603386|gb|ACX85872.1| DNA replication and repair protein RecF [Pectobacterium wasabiae WPP163] Length = 361 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALVPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|237740603|ref|ZP_04571084.1| hemin transport system ATP-binding protein hmuV [Fusobacterium sp. 2_1_31] gi|229422620|gb|EEO37667.1| hemin transport system ATP-binding protein hmuV [Fusobacterium sp. 2_1_31] Length = 258 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 14/91 (15%) Query: 15 KSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS-EAIEWL 73 ++L +Y +K I K L ++I + LT + G NG GKS+L+ I++L Sbjct: 7 ENLNYFYGKKQILKELKLDID-------------ENKLTGIIGPNGCGKSTLAKNIIKYL 53 Query: 74 FYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 + + IKK S K + +P+ Sbjct: 54 NGDFKKLEIMDIDIKKLSHKKIAQLISYIPQ 84 >gi|288573677|ref|ZP_06392034.1| DNA replication and repair protein RecF [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569418|gb|EFC90975.1| DNA replication and repair protein RecF [Dethiosulfovibrio peptidovorans DSM 11002] Length = 354 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 +FR E +I++ L ++ G NG GK+++ E++ L + + + Sbjct: 10 NFRNL-ETGRIKWDRKLNLLIGPNGAGKTNILESLHILTGWGPFKSLRKSPLVNWNSDES 68 Query: 96 M 96 Sbjct: 69 R 69 >gi|227328543|ref|ZP_03832567.1| recombination protein F [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 361 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALVPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|227113114|ref|ZP_03826770.1| recombination protein F [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686412|ref|YP_003015602.1| DNA replication and repair protein RecF [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259563667|sp|C6DGH9|RECF_PECCP RecName: Full=DNA replication and repair protein recF gi|251752990|gb|ACT11066.1| DNA replication and repair protein RecF [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 361 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALVPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|50123357|ref|YP_052524.1| recombination protein F [Pectobacterium atrosepticum SCRI1043] gi|81693014|sp|Q6CYR6|RECF_ERWCT RecName: Full=DNA replication and repair protein recF gi|49613883|emb|CAG77335.1| DNA replication and repair protein [Pectobacterium atrosepticum SCRI1043] Length = 361 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIKDFRNI-EAADLALVPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAGR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|320095175|ref|ZP_08026881.1| hypothetical protein HMPREF9005_1493 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977880|gb|EFW09517.1| hypothetical protein HMPREF9005_1493 [Actinomyces sp. oral taxon 178 str. F0338] Length = 383 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + I ++R F ++ + L + G N GKS+L + +L Sbjct: 1 MQFTHVHIRNWRNFRDL-RFNVGPRL-FIVGPNASGKSNLLDVFRFL 45 >gi|312879825|ref|ZP_07739625.1| AAA ATPase [Aminomonas paucivorans DSM 12260] gi|310783116|gb|EFQ23514.1| AAA ATPase [Aminomonas paucivorans DSM 12260] Length = 355 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 8/62 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 KLL + +F+G E I F LT G+NG GK+++ +AI + T+ Sbjct: 1 MKLLGCSLKNFKGIREKT-ISFRGDPQGDPRPLTAFLGENGTGKTTVLQAIALVLSLATR 59 Query: 80 RR 81 + Sbjct: 60 KG 61 >gi|295401063|ref|ZP_06811037.1| ABC transporter related protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976856|gb|EFG52460.1| ABC transporter related protein [Geobacillus thermoglucosidasius C56-YS93] Length = 483 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Query: 21 YARKLIFKLLDIEISHFRGFT--------EIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 Y R + + I + HFRGF E + + + + G+NG GKS+L A+ Sbjct: 247 YQRPTVQQEEIIHLRHFRGFRLRDVKICIEEATVRAGEWI-AITGKNGAGKSTLLHALMR 305 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 L +G K+ Sbjct: 306 LIRTDGTYELYGKDSKQLKQ 325 >gi|91776973|ref|YP_546729.1| hypothetical protein Mfla_2624 [Methylobacillus flagellatus KT] gi|91710960|gb|ABE50888.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 505 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ + ++ FR ++ ++ D L ++ G+N GKS++ EA+ Sbjct: 1 MKIKAVTVNRFRSYSSPVTVQVDD-LLVLVGRNDIGKSTILEAL 43 >gi|306821662|ref|ZP_07455260.1| ABC superfamily ATP binding cassette transporter [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550407|gb|EFM38400.1| ABC superfamily ATP binding cassette transporter [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 245 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVP 103 Q + F + +T G+NG GKS+L EAI + YG+ + + P+C AV Sbjct: 33 QYLNFDNRVTFFTGENGSGKSTLLEAIA-VAYGFNPEGGTVNY-NFSTYDDVSPLCDAVT 90 Query: 104 RCK 106 K Sbjct: 91 VSK 93 >gi|241896279|ref|ZP_04783575.1| exonuclease SbcC [Weissella paramesenteroides ATCC 33313] gi|241870520|gb|EER74271.1| exonuclease SbcC [Weissella paramesenteroides ATCC 33313] Length = 1068 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 35/72 (48%), Gaps = 5/72 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + +++++F + + I+F++ L ++ G G GK+++ + + + +G + Sbjct: 1 MRPIKLQLNNFGPY-DHAVIDFSNFTESKLFLITGDTGAGKTTIFDGMTYALFGEGTGER 59 Query: 83 HGDSIKKRSIKT 94 + ++ T Sbjct: 60 QPEDMRSEFADT 71 >gi|313669116|ref|YP_004049400.1| hypothetical protein NLA_18410 [Neisseria lactamica ST-640] gi|313006578|emb|CBN88043.1| hypothetical protein NLA_18410 [Neisseria lactamica 020-06] Length = 683 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I + +F+ + E F + ++ ++ NG+GK++L EA+ Y Sbjct: 3 MWIHSIRLLNFKSYKEAA-FSFPEPKNGQNIILIGAMNGHGKTTLLEAVYLCLYDTDA 59 >gi|300784656|ref|YP_003764947.1| ATPase [Amycolatopsis mediterranei U32] gi|299794170|gb|ADJ44545.1| ATPase [Amycolatopsis mediterranei U32] Length = 390 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + + I +FR +++ +T + G NG GKS++ +A+++L Sbjct: 7 IERLRIRNFRVLRDVELAGLTP-VTALLGPNGSGKSTVFDALDFL 50 >gi|281366584|ref|NP_730660.3| Smc5, isoform F [Drosophila melanogaster] gi|272455267|gb|AAN12180.3| Smc5, isoform F [Drosophila melanogaster] Length = 1001 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|281366582|ref|NP_996141.2| Smc5, isoform E [Drosophila melanogaster] gi|272455266|gb|AAN12179.3| Smc5, isoform E [Drosophila melanogaster] Length = 1034 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|195480658|ref|XP_002086685.1| GE23268 [Drosophila yakuba] gi|194186475|gb|EDX00087.1| GE23268 [Drosophila yakuba] Length = 1034 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLTGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|167767150|ref|ZP_02439203.1| hypothetical protein CLOSS21_01669 [Clostridium sp. SS2/1] gi|167711125|gb|EDS21704.1| hypothetical protein CLOSS21_01669 [Clostridium sp. SS2/1] gi|291559522|emb|CBL38322.1| ABC-type multidrug transport system, ATPase component [butyrate-producing bacterium SSC/2] Length = 290 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSIKKRSIK 93 IEF+D + + G NG GK++L I + + + + G I+ K Sbjct: 23 IEFSDGVYGILGANGAGKTTLISIITGILQQTSGQVKLDGSDIRDMGTK 71 >gi|20145494|emb|CAD29584.1| SMC5 protein [Drosophila melanogaster] Length = 1030 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|89099260|ref|ZP_01172138.1| DNA repair protein (recombination protein N) [Bacillus sp. NRRL B-14911] gi|89086106|gb|EAR65229.1| DNA repair protein (recombination protein N) [Bacillus sp. NRRL B-14911] Length = 563 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIKNF-AIIEALSVSFEKGLTVLTGETGAGKSIIIDAIHLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 HGEQKAEIE 65 >gi|87308470|ref|ZP_01090611.1| ABC transport protein, ATP-binding subunit [Blastopirellula marina DSM 3645] gi|87289027|gb|EAQ80920.1| ABC transport protein, ATP-binding subunit [Blastopirellula marina DSM 3645] Length = 396 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 K++ ++I FR Q D L +V G N GKS+L A+E Sbjct: 1 MKIVQLDIEGFRSLKS-QSWRPGD-LNVVIGPNASGKSNLLRALE 43 >gi|172056948|ref|YP_001813408.1| DNA repair protein RecN [Exiguobacterium sibiricum 255-15] gi|171989469|gb|ACB60391.1| DNA repair protein RecN [Exiguobacterium sibiricum 255-15] Length = 569 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I F + +I+F +T++ G+ G GKS + +AI L G Sbjct: 1 MMLAELSIKQF-AIIDQLQIDFKKGMTVLTGETGAGKSIVLDAIGLLIGG 49 >gi|313112697|ref|ZP_07798349.1| hypothetical protein HMPREF9436_00189 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624987|gb|EFQ08290.1| hypothetical protein HMPREF9436_00189 [Faecalibacterium cf. prausnitzii KLE1255] Length = 1097 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L +++ ++ F E + A LT + G N GK+++ +AI + Sbjct: 1 MIELKRLKLINWHNF-ENVTFDCAR-LTYMIGVNAVGKTTILDAIRYCLTTN 50 >gi|295101894|emb|CBK99439.1| SMC proteins Flexible Hinge Domain [Faecalibacterium prausnitzii L2-6] Length = 1104 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L +++ ++ F E + A LT + G N GK+++ +AI + Sbjct: 1 MIELKRLKLINWHNF-ENVTFDCAR-LTYMIGVNAVGKTTILDAIRYCLTTN 50 >gi|257437777|ref|ZP_05613532.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] gi|257199792|gb|EEU98076.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] Length = 1112 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + +L +++ ++ F E + A LT + G N GK+++ +AI + Sbjct: 1 MIELKRLKLINWHNF-ENVTFDCAR-LTYMIGVNAVGKTTILDAIRYCLTTN 50 >gi|195573397|ref|XP_002104680.1| GD18313 [Drosophila simulans] gi|194200607|gb|EDX14183.1| GD18313 [Drosophila simulans] Length = 1123 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + +++F + IEF ++ + G NG GKS++ A+ + SI Sbjct: 102 KVISMRLTNFMCHS-NLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 160 Query: 88 KKR 90 +K Sbjct: 161 QKL 163 >gi|157127726|ref|XP_001661151.1| structural maintenance of chromosomes 5 smc5 [Aedes aegypti] gi|108872830|gb|EAT37055.1| structural maintenance of chromosomes 5 smc5 [Aedes aegypti] Length = 1060 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%) Query: 2 TRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGY 61 +R ++ + A +++ L L K+ + + F + ++ +HL I+ G NG Sbjct: 5 SRSKQNHHPAVVNRILYEEMTDSLKGKIKSVAVKDFVTY-DVVIFYPDEHLNIIIGPNGT 63 Query: 62 GKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 GKS++ AI G + SI+ Sbjct: 64 GKSTIVAAIVLGMGGNCKLLSRSGSIED 91 >gi|33589338|gb|AAQ22436.1| RE65864p [Drosophila melanogaster] Length = 1034 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|290985195|ref|XP_002675311.1| structural maintenance of chromosome 5 [Naegleria gruberi] gi|284088907|gb|EFC42567.1| structural maintenance of chromosome 5 [Naegleria gruberi] Length = 900 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ I+I +F + + + L +V G NG GKSS+ AI G+T+ + Sbjct: 70 IVRIKIHNFMTYDDCEFFP-GPGLNLVLGPNGTGKSSIVGAICVGLAGHTKLLGRASRVS 128 Query: 89 K 89 Sbjct: 129 D 129 >gi|269214498|ref|ZP_06158610.1| putative DNA sulfur modification protein DndD [Neisseria lactamica ATCC 23970] gi|269209648|gb|EEZ76103.1| putative DNA sulfur modification protein DndD [Neisseria lactamica ATCC 23970] Length = 507 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I + +F+ + E F + ++ ++ NG+GK++L EA+ Y Sbjct: 1 MWIHSIRLLNFKSYKEAA-FSFPEPKNGQNIILIGAMNGHGKTTLLEAVYLCLYDTDA 57 >gi|218682258|ref|ZP_03529859.1| recombination protein F [Rhizobium etli CIAT 894] Length = 123 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + H ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYASAALTLDGRH-AVLTGDNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|220909312|ref|YP_002484623.1| hypothetical protein Cyan7425_3946 [Cyanothece sp. PCC 7425] gi|219865923|gb|ACL46262.1| conserved hypothetical protein [Cyanothece sp. PCC 7425] Length = 356 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +++I +FR F + E L ++ G+N GK+S+ EAI+ + Sbjct: 2 LKNLKIENFRCFKSFELKELG-QLNLLVGKNNSGKTSILEAIQLIVSESYLEALR 55 >gi|209546775|ref|YP_002278693.1| AAA ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538019|gb|ACI57953.1| AAA ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 257 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++FA +TI+ G+NG GKS+L EA+ G+ + + Sbjct: 45 LDFATPVTIIVGENGTGKSTLIEAVA-ALCGFDEAGGGKGYM 85 >gi|302776058|ref|XP_002971325.1| hypothetical protein SELMODRAFT_60332 [Selaginella moellendorffii] gi|300161307|gb|EFJ27923.1| hypothetical protein SELMODRAFT_60332 [Selaginella moellendorffii] Length = 1038 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + I+F D++ + GQNG GKS++ A+ F + + S+K Sbjct: 4 IARIRVENFMCHS-NLSIDFVDNVNFITGQNGSGKSAILTALCIAFGIRARGTQRATSLK 62 Query: 89 K 89 Sbjct: 63 D 63 >gi|290968316|ref|ZP_06559858.1| DNA repair protein RecN [Megasphaera genomosp. type_1 str. 28L] gi|290781675|gb|EFD94261.1| DNA repair protein RecN [Megasphaera genomosp. type_1 str. 28L] Length = 568 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I HF E I F D LTI G+ G GKS L +A+ Sbjct: 2 LQSLHIRHF-ALIEELHIHFGDGLTIFTGETGAGKSILLDAM 42 >gi|251782887|ref|YP_002997190.1| DNA repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391517|dbj|BAH81976.1| DNA repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 554 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL+I I +F E + F + +T++ G+ G GKS + +A+ + R + Sbjct: 1 MMLLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEV 55 Query: 87 IKKRSIKTPMP 97 I++ + K + Sbjct: 56 IRRGANKAEIE 66 >gi|309792727|ref|ZP_07687178.1| SMC domain-containing protein [Oscillochloris trichoides DG6] gi|308225276|gb|EFO79053.1| SMC domain-containing protein [Oscillochloris trichoides DG6] Length = 1031 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 8/87 (9%) Query: 30 LDIEISHFRGFTEI------QKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I +F + +++ H+ ++G+NG GKS+L +AI W +G R Sbjct: 4 TSLVIQNFMCYRAPGDASPDLRLDLDGLHVVCLSGENGAGKSALLDAITWALWGQ-ARTP 62 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQL 109 D I + + + + + Y++ Sbjct: 63 DDDLIAQGESEMRVELTFQLGDQHYRV 89 >gi|305663543|ref|YP_003859831.1| SMC domain protein [Ignisphaera aggregans DSM 17230] gi|304378112|gb|ADM27951.1| SMC domain protein [Ignisphaera aggregans DSM 17230] Length = 765 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRKHGDS 86 + + + + E I F L + G NG GKSS+ ++I + + + R G+ Sbjct: 7 VRRVRLRNILSH-ENTDIVFPMGLIALVGPNGAGKSSIVDSIVYAMFVSPKSGRSFRGEG 65 Query: 87 IK 88 K Sbjct: 66 KK 67 >gi|229185447|ref|ZP_04312629.1| hypothetical protein bcere0004_30000 [Bacillus cereus BGSC 6E1] gi|228598035|gb|EEK55673.1| hypothetical protein bcere0004_30000 [Bacillus cereus BGSC 6E1] Length = 664 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + ++ +S+FR F ++ ++LT + G N GK+SL A+ LF R Sbjct: 1 MLISELHVSNFRSFGYESQMIETENLTALIGANSSGKTSLIMALLRLFGQKNTDR 55 >gi|222528341|ref|YP_002572223.1| SMC domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455188|gb|ACM59450.1| SMC domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 412 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL + + +F+ F EI +E D +V G N GKS+ + ++L Sbjct: 1 MKLKSLSVKNFKSFKEIN-VELKD-FNVVIGANASGKSNFVQVFKFL 45 >gi|195331556|ref|XP_002032467.1| GM23503 [Drosophila sechellia] gi|194121410|gb|EDW43453.1| GM23503 [Drosophila sechellia] Length = 1126 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + +++F + IEF ++ + G NG GKS++ A+ + SI Sbjct: 102 KVISMRLTNFMCHS-NLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 160 Query: 88 KKR 90 +K Sbjct: 161 QKL 163 >gi|327474502|gb|EGF19907.1| recombination protein F [Streptococcus sanguinis SK408] Length = 75 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 26 IFKLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + K+ ++IS+FR F E I+ D L I G+N GK+++ AI Sbjct: 1 MIKISRLKISNFRSFTNEENTIDELDVLNIFAGRNNVGKTNVLRAI 46 >gi|222153398|ref|YP_002562575.1| DNA repair protein [Streptococcus uberis 0140J] gi|222114211|emb|CAR42769.1| putative DNA repair protein [Streptococcus uberis 0140J] Length = 553 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F + +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTDVIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 + K + ++ R Sbjct: 57 HGTEKAEIEGFFSLDR 72 >gi|212212320|ref|YP_002303256.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212010730|gb|ACJ18111.1| DNA repair protein [Coxiella burnetii CbuG_Q212] Length = 556 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I +F E ++F LT++ G+ G GKS + +A+ Sbjct: 2 LTHIHIKNF-IVVESLSLDFDKGLTVLTGETGAGKSIIVDAVNLALGE 48 >gi|261342046|ref|ZP_05969904.1| DNA repair protein RecN [Enterobacter cancerogenus ATCC 35316] gi|190341505|gb|ACE74829.1| RecN [Enterobacter cancerogenus] gi|288315702|gb|EFC54640.1| DNA repair protein RecN [Enterobacter cancerogenus ATCC 35316] Length = 553 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLGS----RAEGDMVR 56 >gi|209364058|ref|YP_001424737.2| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|207081991|gb|ABS77588.2| DNA repair protein [Coxiella burnetii Dugway 5J108-111] Length = 608 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I +F E ++F LT++ G+ G GKS + +A+ Sbjct: 54 LTHIHIKNF-IVVESLSLDFDKGLTVLTGETGAGKSIIVDAVNLALGE 100 >gi|195495495|ref|XP_002095291.1| GE19773 [Drosophila yakuba] gi|194181392|gb|EDW95003.1| GE19773 [Drosophila yakuba] Length = 993 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLTGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|161830993|ref|YP_001597149.1| DNA repair protein RecN [Coxiella burnetii RSA 331] gi|161762860|gb|ABX78502.1| DNA repair protein RecN [Coxiella burnetii RSA 331] Length = 556 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I +F E ++F LT++ G+ G GKS + +A+ Sbjct: 2 LTHIHIKNF-IVVESLSLDFDKGLTVLTGETGAGKSIIVDAVNLALGE 48 >gi|157325070|ref|YP_001468495.1| gp115 [Listeria phage A511] gi|66733078|gb|AAY52896.1| gp115 [Listeria phage A511] Length = 627 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQN---------GYGKSSLSEAIEWLFYG 76 +F ++I +F +++ L ++ G+N G GK+S+ +AI + +G Sbjct: 1 MFTFKKVKIKNFLSIKDMELNLDKQGLVLIEGKNKTNEAFKSNGAGKTSMIDAITYAIFG 60 Query: 77 YTQRRKHGDSIKKRSIK--TPMPMCMAVPRCKYQLK 110 T DS+ K T + + V + KY+++ Sbjct: 61 KTVGGLKSDSVVNNKEKKNTAVILDFEVDKNKYRIE 96 >gi|153207491|ref|ZP_01946191.1| DNA repair protein RecN [Coxiella burnetii 'MSU Goat Q177'] gi|165918941|ref|ZP_02219027.1| DNA repair protein RecN [Coxiella burnetii RSA 334] gi|212218711|ref|YP_002305498.1| DNA repair protein [Coxiella burnetii CbuK_Q154] gi|120576622|gb|EAX33246.1| DNA repair protein RecN [Coxiella burnetii 'MSU Goat Q177'] gi|165917338|gb|EDR35942.1| DNA repair protein RecN [Coxiella burnetii RSA 334] gi|212012973|gb|ACJ20353.1| DNA repair protein [Coxiella burnetii CbuK_Q154] Length = 556 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I +F E ++F LT++ G+ G GKS + +A+ Sbjct: 2 LTHIHIKNF-IVVESLSLDFDKGLTVLTGETGAGKSIIVDAVNLALGE 48 >gi|161622553|ref|YP_001595183.1| gp46 recombination endonuclease subunit [Enterobacteria phage JS98] gi|52139874|gb|AAU29245.1| gp46 recombination endonuclease subunit [Enterobacteria phage JS98] Length = 560 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKL + + + I+ T+V G+NG GKS+ EA+ + +G R Sbjct: 4 FKLKKVTYKNIMSVGQQPITIQLDKVQKTLVTGKNGAGKSTFLEAVTFALFGKPFRDVKK 63 Query: 85 DSIKKRSIK 93 + S K Sbjct: 64 GQLINSSNK 72 >gi|29654597|ref|NP_820289.1| DNA repair protein [Coxiella burnetii RSA 493] gi|29541865|gb|AAO90803.1| DNA repair protein [Coxiella burnetii RSA 493] Length = 556 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I I +F E ++F LT++ G+ G GKS + +A+ Sbjct: 2 LTHIHIKNF-IVVESLSLDFDKGLTVLTGETGAGKSIIVDAVNLALGE 48 >gi|320327009|gb|EFW83025.1| hypothetical protein PsgRace4_26820 [Pseudomonas syringae pv. glycinea str. race 4] gi|330882737|gb|EGH16886.1| hypothetical protein Pgy4_28040 [Pseudomonas syringae pv. glycinea str. race 4] Length = 745 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ I++ +FR +I ++ L+++ G+N GK+S +E G R Sbjct: 1 MRITKIKMQNFRLLKDI-SVDLESGLSVIIGKNNTGKTSFLLCLEKFIGGTATRN 54 >gi|317402175|gb|EFV82766.1| DNA repair protein [Achromobacter xylosoxidans C54] Length = 553 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E +I F T+ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTEIHFGPGFTVFSGETGAGKSILIDALALALGE 48 >gi|260549560|ref|ZP_05823778.1| SMC domain-containing protein [Acinetobacter sp. RUH2624] gi|260407353|gb|EEX00828.1| SMC domain-containing protein [Acinetobacter sp. RUH2624] Length = 242 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +I+++ F +T G+NG GKS++ EAI Sbjct: 32 NDIEQLTFHPDVTFFVGENGSGKSTIMEAIALALG 66 >gi|302558752|ref|ZP_07311094.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476370|gb|EFL39463.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 420 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++R F E Q++E +T+V G+N GKS++ A+ L G GDS Sbjct: 1 MSLERFSLENYRCFRERQEVELGR-ITVVLGRNNSGKSAVVRALPLLSLG-----IRGDS 54 >gi|189460154|ref|ZP_03008939.1| hypothetical protein BACCOP_00790 [Bacteroides coprocola DSM 17136] gi|189433144|gb|EDV02129.1| hypothetical protein BACCOP_00790 [Bacteroides coprocola DSM 17136] Length = 1272 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 8/79 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KLL + + + Q I+F L + G+ G GKS++ +A+ YG R Sbjct: 1 MKLLKVIMYNLASLEGEQVIDFESEPLRSADLFSIVGETGSGKSTILDAVCLALYGLAPR 60 Query: 81 RKHGDSIKKRSIKTPMPMC 99 D+ T P Sbjct: 61 FYGADN--FDYYHTERPNN 77 >gi|251796831|ref|YP_003011562.1| ATPase AAA [Paenibacillus sp. JDR-2] gi|247544457|gb|ACT01476.1| AAA ATPase [Paenibacillus sp. JDR-2] Length = 237 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ F ++T + G+NG GKS+L EAI + +T ++ Sbjct: 31 RLHFRSNVTFLVGENGSGKSTLLEAIAYQCGFHTAGGGRNNA 72 >gi|91216484|ref|ZP_01253450.1| DNA repair protein RecN [Psychroflexus torquis ATCC 700755] gi|91185278|gb|EAS71655.1| DNA repair protein RecN [Psychroflexus torquis ATCC 700755] Length = 550 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 32 IEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + + + F E +EF DH +I+ G+ G GKS + A+ L DS KK Sbjct: 2 LRVLGIKNFALIEDISLEFTDHFSIITGETGAGKSIILGALSLLLGKRADLNSIKDSEKK 61 Query: 90 RSIK 93 I+ Sbjct: 62 CIIE 65 >gi|57635344|emb|CAI44011.1| putative RecF protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 276 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 19 IMIQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 73 >gi|4020|emb|CAA28789.1| unnamed protein product [Saccharomyces cerevisiae] Length = 184 Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 81 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139 Query: 88 KKR 90 K Sbjct: 140 KDL 142 >gi|300692579|ref|YP_003753574.1| hypothetical protein RPSI07_2954 [Ralstonia solanacearum PSI07] gi|299079639|emb|CBJ52317.2| conserved hypothethical protein, nucleoside triphosphate hydrolase domain [Ralstonia solanacearum PSI07] Length = 599 Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I IS+FR F E +E D ++ G+N GKS+L A+ +F Sbjct: 1 MKLSRIHISNFRNFHE-ADVEL-DGNVVIVGENRVGKSNLLYAMRLIFD 47 >gi|312112161|ref|YP_003990477.1| ABC transporter [Geobacillus sp. Y4.1MC1] gi|311217262|gb|ADP75866.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1] Length = 483 Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Query: 21 YARKLIFKLLDIEISHFRGFT--------EIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 Y R + + I + HFRGF E + + + + G+NG GKS+L A+ Sbjct: 247 YQRPAVQQEEIIHLRHFRGFRLRDVKIRIEEATVRAGEWI-AITGKNGAGKSTLLHALMR 305 Query: 73 LFYGYTQRRKHGDSIKKRSI 92 L +G K+ Sbjct: 306 LIRTDGTYELYGKDSKQLKQ 325 >gi|33866581|ref|NP_898140.1| recombination protein F [Synechococcus sp. WH 8102] gi|51316337|sp|Q7U4L8|RECF_SYNPX RecName: Full=DNA replication and repair protein recF gi|33633359|emb|CAE08564.1| putative DNA repair and genetic recombination protein RecF [Synechococcus sp. WH 8102] Length = 365 Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + FR +E +V G NG GKS+L EA+E L + R + + Sbjct: 1 MQGFRNHR-KLSLELTQPRLLVIGPNGIGKSNLLEAVELLGSLRSHRCSQDRDLI--QWE 57 Query: 94 TPMPMCMA 101 P + A Sbjct: 58 APRALLRA 65 >gi|325685894|gb|EGD27960.1| DNA repair protein RecN [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 562 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEM 54 >gi|313124100|ref|YP_004034359.1| recn, ATPase involved in DNA repair [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280663|gb|ADQ61382.1| RecN, ATPase involved in DNA repair [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 562 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEM 54 >gi|300811666|ref|ZP_07092142.1| DNA repair protein RecN [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497367|gb|EFK32413.1| DNA repair protein RecN [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 562 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L++++I +F + KI+F +T++ G+ G GKS L +A+ L Q+ Sbjct: 2 LVELDIQNF-AIIKSLKIKFQPQMTVLIGETGAGKSILIDALSLLLGHRAQKEM 54 >gi|299779010|ref|YP_003734204.1| gp46 recombination endonuclease subunit [Enterobacteria phage IME08] gi|298105739|gb|ADI55383.1| gp46 recombination endonuclease subunit [Enterobacteria phage IME08] Length = 560 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKL + + + I+ T+V G+NG GKS+ EA+ + +G R Sbjct: 4 FKLKKVTYKNIMSVGQQPITIQLDKVQKTLVTGKNGAGKSTFLEAVTFALFGKPFRDVKK 63 Query: 85 DSIKKRSIK 93 + S K Sbjct: 64 GQLINSSNK 72 >gi|290509630|ref|ZP_06549001.1| RecF/RecN/SMC domain-containing protein [Klebsiella sp. 1_1_55] gi|289779024|gb|EFD87021.1| RecF/RecN/SMC domain-containing protein [Klebsiella sp. 1_1_55] Length = 376 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L R G Sbjct: 14 MMIQYIRIQNFRSVRDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAADGRLSG 68 >gi|262044379|ref|ZP_06017442.1| SMC family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038267|gb|EEW39475.1| SMC family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 362 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 2 IQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 54 >gi|238695210|ref|YP_002922403.1| gp46 recombination endonuclease subunit [Enterobacteria phage JS10] gi|220029346|gb|ACL78280.1| gp46 recombination endonuclease subunit [Enterobacteria phage JS10] Length = 560 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 27 FKLLDIEISHFRGFTE-IQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKL + + + I+ T+V G+NG GKS+ EA+ + +G R Sbjct: 4 FKLKKVTYKNIMSVGQQPITIQLDKVQKTLVTGKNGAGKSTFLEAVTFALFGKPFRDVKK 63 Query: 85 DSIKKRSIK 93 + S K Sbjct: 64 GQLINSSNK 72 >gi|228473756|ref|ZP_04058501.1| RecF protein [Capnocytophaga gingivalis ATCC 33624] gi|228274777|gb|EEK13600.1| RecF protein [Capnocytophaga gingivalis ATCC 33624] Length = 359 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I +F+ E + F+ L + G NG GK++ +AI Sbjct: 1 MFLKRLYILNFKNI-ESRDFSFSPSLNCLIGDNGVGKTNSLDAI 43 >gi|227484845|ref|ZP_03915161.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227237205|gb|EEI87220.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 604 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ I F F + I ++ G N GK++L IE +FYG+ + + Sbjct: 4 IFIEELNIKSFGKFQDKT-IRLNPSFNLIYGLNESGKTTLKNFIEGMFYGFDEGKLRTSF 62 Query: 87 IKKRSIKTPM 96 KR I P Sbjct: 63 SNKREIYRPK 72 >gi|224543275|ref|ZP_03683814.1| hypothetical protein CATMIT_02475 [Catenibacterium mitsuokai DSM 15897] gi|224523808|gb|EEF92913.1| hypothetical protein CATMIT_02475 [Catenibacterium mitsuokai DSM 15897] Length = 547 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS F + +++F + +T + G+ G GKS + A+E L K Sbjct: 2 LKSLFISSF-VIIDQTQVDFEEGMTALTGETGAGKSIIINALEQLCGARASSSLVRKGAK 60 Query: 89 KRSIKTPMPMC 99 K I+ M Sbjct: 61 KAVIEGVFDMN 71 >gi|257058618|ref|YP_003136506.1| hypothetical protein Cyan8802_0732 [Cyanothece sp. PCC 8802] gi|256588784|gb|ACU99670.1| conserved hypothetical protein [Cyanothece sp. PCC 8802] Length = 399 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + DI+I +FR F E I+ + + ++ G+N GK++L EAI + K D ++ Sbjct: 2 IKDIDIENFRCF-ERTHIKGFERVNLIGGKNNSGKTALLEAI---LLNQSPEIKIIDFLR 57 Query: 89 KRSIKTPMPMCMAVP 103 + + P Sbjct: 58 DLRQEVEELTELEYP 72 >gi|165938056|ref|ZP_02226616.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|165938073|ref|ZP_02226633.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|165940282|ref|ZP_02228809.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|330006573|ref|ZP_08305645.1| RecF/RecN/SMC protein [Klebsiella sp. MS 92-3] gi|165911789|gb|EDR30439.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|165914079|gb|EDR32696.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|165914096|gb|EDR32713.1| putative RecF protein [Yersinia pestis biovar Orientalis str. IP275] gi|328535788|gb|EGF62224.1| RecF/RecN/SMC protein [Klebsiella sp. MS 92-3] Length = 362 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L + R G Sbjct: 2 IQYIRIQNFRSVKDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAAEGRLSG 54 >gi|152996377|ref|YP_001341212.1| SMC domain-containing protein [Marinomonas sp. MWYL1] gi|150837301|gb|ABR71277.1| SMC domain protein [Marinomonas sp. MWYL1] Length = 1247 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + + +I+F + + G G GKS+L +AI Y T R Sbjct: 1 MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR 60 >gi|152966508|ref|YP_001362292.1| SMC domain protein [Kineococcus radiotolerans SRS30216] gi|151361025|gb|ABS04028.1| SMC domain protein [Kineococcus radiotolerans SRS30216] Length = 829 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + +E+ + R D +T +NG G GKS++ + + +G T Sbjct: 1 MITIESVELVNVRSIGRAVVEPLVDGGVTALNGPRGVGKSTVLIGLLYALFGTTPDGVPA 60 Query: 85 DSIKKRSIKTPMPM 98 +++++ + + + Sbjct: 61 QALRRQGSEGEVKI 74 >gi|330686009|gb|EGG97632.1| DNA repair protein RecN [Staphylococcus epidermidis VCU121] Length = 558 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|325269043|ref|ZP_08135664.1| DNA repair protein RecN [Prevotella multiformis DSM 16608] gi|324988664|gb|EGC20626.1| DNA repair protein RecN [Prevotella multiformis DSM 16608] Length = 555 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + IEF +++ G+ G GKS + AI L + K Sbjct: 2 LKHLYIKNF-TLIDQLDIEFRPGFSVITGETGAGKSIILGAIGLLLGNRADSKLIKQGEK 60 Query: 89 KRSIK 93 K +I+ Sbjct: 61 KCTIE 65 >gi|315123048|ref|YP_004065054.1| hypothetical protein PSM_B0105 [Pseudoalteromonas sp. SM9913] gi|315016808|gb|ADT70145.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 591 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEI--SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL+ I+I + G+ ++F D++T + G+NG GK+ + ++I + + Sbjct: 1 MKLISIQIFSNGLSGWQSDL-LKFGDNITQLFGKNGCGKTPIVQSIAFCLGYPSV--FRN 57 Query: 85 DSIKKRS 91 D ++ + Sbjct: 58 DIYERCN 64 >gi|307211152|gb|EFN87370.1| Structural maintenance of chromosomes protein 6 [Harpegnathos saltator] Length = 1006 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +I + +F + +I+ +++ + G+NG GKS++ A+ G S+ Sbjct: 40 RVKNIRLRNFMCH-DALEIKLNENVNFIVGRNGSGKSAILTALTVGLGARAYITNRGTSL 98 Query: 88 KK 89 KK Sbjct: 99 KK 100 >gi|242242627|ref|ZP_04797072.1| exonuclease SbcC [Staphylococcus epidermidis W23144] gi|242233763|gb|EES36075.1| exonuclease SbcC [Staphylococcus epidermidis W23144] Length = 1002 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 11/82 (13%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 + +F F + I+F D L +++G+ G GK+ + +AI + YG + + ++ Sbjct: 1 MENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTRKEGDLR 59 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 PM + YQ K Sbjct: 60 SHFADGKSPMSVI-----YQFK 76 >gi|239637671|ref|ZP_04678643.1| DNA repair protein RecN [Staphylococcus warneri L37603] gi|239596889|gb|EEQ79414.1| DNA repair protein RecN [Staphylococcus warneri L37603] Length = 558 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|186684779|ref|YP_001867975.1| DNA repair protein RecN [Nostoc punctiforme PCC 73102] gi|186467231|gb|ACC83032.1| DNA repair protein RecN [Nostoc punctiforme PCC 73102] Length = 582 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + ++EF L ++ G+ G GKS + +AI+ G R Sbjct: 2 LLCLRIENF-ALIDQLELEFGAGLNVLTGETGAGKSIILDAIDAALGGKVSSRV 54 >gi|157691717|ref|YP_001486179.1| hypothetical protein BPUM_0935 [Bacillus pumilus SAFR-032] gi|157680475|gb|ABV61619.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 929 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + I+HF F+ F+D +V G N GK++L IE + +G+ + + + Sbjct: 1 MKIRSLHIAHFGKFSNRT-FHFSDDGFQLVYGLNESGKTTLKTFIESMLFGFPKNKMYKS 59 Query: 86 S 86 Sbjct: 60 K 60 >gi|27383288|ref|NP_774817.1| hypothetical protein bll8177 [Bradyrhizobium japonicum USDA 110] gi|27356462|dbj|BAC53442.1| bll8177 [Bradyrhizobium japonicum USDA 110] Length = 829 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 29 LLDIEISHFRGFT---EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + I FRG + ++F +D + V+ NG GKSS+ EA+ + +G R Sbjct: 6 LGSLSIEGFRGINNDGDPLVLKFKSDAVNSVHAPNGVGKSSIFEAVCFAIHGIVPR 61 >gi|146295676|ref|YP_001179447.1| ATP-dependent OLD family endonuclease [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409252|gb|ABP66256.1| ATP-dependent endonuclease of the OLD family-like protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 581 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I +++ F + +I + + GQN GKS++ +AI+ F Y ++ D Sbjct: 1 MYISKMRIRNYKSFLDSGEIMLDEKIFAFIGQNNTGKSTILDAIKIFFPNYKKQVDRKD 59 >gi|239627929|ref|ZP_04670960.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518075|gb|EEQ57941.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1007 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 L ++ G G GK+++ +AI + YG + + Sbjct: 10 DRGLYLITGDTGAGKTTIFDAITFALYGNASGEARRPKMLRSKY 53 >gi|257784001|ref|YP_003179218.1| SMC domain-containing protein [Atopobium parvulum DSM 20469] gi|257472508|gb|ACV50627.1| SMC domain protein [Atopobium parvulum DSM 20469] Length = 895 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 36 HFRGFTEIQ--KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +F+G + + I F+ HL + G G GKS+L EAI + + Sbjct: 276 NFKGISHMTDMNIRFSPHLNCIVGGRGTGKSTLVEAINYGVGNES 320 >gi|24649575|ref|NP_651228.1| CG5524 [Drosophila melanogaster] gi|7301120|gb|AAF56254.1| CG5524 [Drosophila melanogaster] gi|71834166|gb|AAZ41755.1| SD25546p [Drosophila melanogaster] Length = 1122 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ + +++F + IEF ++ + G NG GKS++ A+ + SI Sbjct: 98 KVISMRLTNFMCHS-NLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 156 Query: 88 KKR 90 +K Sbjct: 157 QKL 159 >gi|294650705|ref|ZP_06728058.1| ABC superfamily ATP binding cassette transporter, ABC protein [Acinetobacter haemolyticus ATCC 19194] gi|292823408|gb|EFF82258.1| ABC superfamily ATP binding cassette transporter, ABC protein [Acinetobacter haemolyticus ATCC 19194] Length = 239 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 6/47 (12%) Query: 29 LLDIEISH-----FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ + F F + +EF ++T++ G+NG GKS++ EA+ Sbjct: 5 LTKVELLNTIPDDF-PFLHLYPLEFRKNITVITGENGSGKSTILEAL 50 >gi|289667384|ref|ZP_06488459.1| hypothetical protein XcampmN_02412 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 231 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ + ++ FRG++E + D L+++ G+N GKS++ EA+ Sbjct: 1 MKIKAVTVNRFRGYSEPVIVGLDD-LSVLVGRNDIGKSTILEAL 43 >gi|297569197|ref|YP_003690541.1| SMC domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925112|gb|ADH85922.1| SMC domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 1087 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + + + +I+ + + + G G GKS++ +A+ YG T R Sbjct: 1 MQIRQLRLKNLNSLVGEWEIDLTHPDYASSGIFAITGPTGAGKSTILDALCLALYGTTPR 60 >gi|226953117|ref|ZP_03823581.1| ABC transporter [Acinetobacter sp. ATCC 27244] gi|226836149|gb|EEH68532.1| ABC transporter [Acinetobacter sp. ATCC 27244] Length = 240 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 6/47 (12%) Query: 29 LLDIEISH-----FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ + F F + +EF ++T++ G+NG GKS++ EA+ Sbjct: 5 LTKVELLNTIPDDF-PFLHLYPLEFRKNITVITGENGSGKSTILEAL 50 >gi|169830701|ref|YP_001716683.1| ATP-dependent endonuclease, OLD family protein [Candidatus Desulforudis audaxviator MP104C] gi|169637545|gb|ACA59051.1| ATP-dependent endonuclease, OLD family protein [Candidatus Desulforudis audaxviator MP104C] Length = 663 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD- 85 + + + +FR + D LT + G+NG GKSSL A+E LFY + + D Sbjct: 1 MLISAVHVKNFRSILDDSLP--CDRLTALVGRNGAGKSSLLRALE-LFYDPSAKVTTEDF 57 Query: 86 SIKKRSIKTPMPMCMA 101 + S + + A Sbjct: 58 YAEDTSQDIEIAVTFA 73 >gi|330908687|gb|EGH37201.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Escherichia coli AA86] Length = 577 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 I KL +I + FRG I IEF LT++ G+NG KS++ Sbjct: 5 ITKLKNINVVKFRGLKNIN-IEFGSRLTVICGKNGTSKSTIL 45 >gi|301108952|ref|XP_002903557.1| structural maintenance of chromosomes protein 6, putative [Phytophthora infestans T30-4] gi|262097281|gb|EEY55333.1| structural maintenance of chromosomes protein 6, putative [Phytophthora infestans T30-4] Length = 1119 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I +F ++ H+ + G+NG GKS++ AI+ + G SIK Sbjct: 78 VEEIYCENFMCHR-KLRVSLCPHINFITGENGSGKSAIIAAIQICLGASARSTHRGKSIK 136 Query: 89 KR 90 Sbjct: 137 NL 138 >gi|259047784|ref|ZP_05738185.1| prophage Lp2 protein 4 [Granulicatella adiacens ATCC 49175] gi|259035461|gb|EEW36716.1| prophage Lp2 protein 4 [Granulicatella adiacens ATCC 49175] Length = 612 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K ++ + +FR F + I +TIV+G NG GKS++ I Sbjct: 4 KPTELILENFRNFRD-VIIPLGKKITIVSGVNGVGKSNILSLI 45 >gi|295674137|ref|XP_002797614.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280264|gb|EEH35830.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1201 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 39 GFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + IE F+ ++ G+NG GKS+ AI ++ Sbjct: 15 NYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVL 51 >gi|218245573|ref|YP_002370944.1| hypothetical protein PCC8801_0703 [Cyanothece sp. PCC 8801] gi|218166051|gb|ACK64788.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] Length = 399 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + DI+I +FR F E I+ + + ++ G+N GK++L EAI + K D ++ Sbjct: 2 IKDIDIENFRCF-ERTHIKGFERVNLIGGKNNSGKTALLEAI---LLNQSPEIKIIDFLR 57 Query: 89 KRSIKTPMPMCMAVP 103 + + P Sbjct: 58 DLRQEVEELTELEYP 72 >gi|51892973|ref|YP_075664.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] gi|51856662|dbj|BAD40820.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] Length = 596 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L++I I F + +++F + + ++ G+ G GKS + +A++ + G T Sbjct: 2 LVEIAIEQF-ALIDQVRLQFTEGMNVLTGETGAGKSIILDAVQAVLGGRT 50 >gi|323486034|ref|ZP_08091365.1| hypothetical protein HMPREF9474_03116 [Clostridium symbiosum WAL-14163] gi|323400601|gb|EGA92968.1| hypothetical protein HMPREF9474_03116 [Clostridium symbiosum WAL-14163] Length = 1281 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSL-SEAIEWLFYGYTQRRKHG 84 F+ ++I + ++R + E + F D +NGQNG GKSSL +AI Y + Sbjct: 412 FEPVEIAVKNYRNY-EEETFNFEDITFCTINGQNGAGKSSLFMDAIIDCLYEEPREGVIK 470 Query: 85 DS 86 D Sbjct: 471 DD 472 >gi|299536618|ref|ZP_07049930.1| hypothetical protein BFZC1_11387 [Lysinibacillus fusiformis ZC1] gi|298728102|gb|EFI68665.1| hypothetical protein BFZC1_11387 [Lysinibacillus fusiformis ZC1] Length = 242 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 22/35 (62%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++ ++EF ++T G+NG GKS+L EAI Sbjct: 22 NIPSLQDLHELEFPTNVTFFVGENGSGKSTLLEAI 56 >gi|293603743|ref|ZP_06686162.1| DNA repair protein RecN [Achromobacter piechaudii ATCC 43553] gi|292817917|gb|EFF76979.1| DNA repair protein RecN [Achromobacter piechaudii ATCC 43553] Length = 553 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 5/74 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I F E +I F T+ +G+ G GKS L +A+ + Sbjct: 2 LRTLHIRDF-VIVEQTEIHFGPGFTVFSGETGAGKSILVDALALALGERGDASMLREGAP 60 Query: 89 KRSI----KTPMPM 98 + I TP + Sbjct: 61 RADITAVFDTPKSL 74 >gi|241896411|ref|ZP_04783707.1| DNA repair ATPase [Weissella paramesenteroides ATCC 33313] gi|241870391|gb|EER74142.1| DNA repair ATPase [Weissella paramesenteroides ATCC 33313] Length = 781 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I + + I F F Q +F L +V G N GK++L + + + +G+ Q + Sbjct: 3 IMWIKKVHIVGFGQFN-QQTFDFVQGLQVVQGLNEAGKTTLHQFLFDMIFGFPQAKGRK 60 >gi|255714078|ref|XP_002553321.1| KLTH0D14080p [Lachancea thermotolerans] gi|238934701|emb|CAR22883.1| KLTH0D14080p [Lachancea thermotolerans] Length = 1102 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +++ +F E ++E L + G NG GKS++ AI G S+K Sbjct: 69 IKRVQLRNFMCH-EHFELELGPRLNFIVGNNGSGKSAVLTAITIGLGAKAADTNRGSSLK 127 Query: 89 KR 90 Sbjct: 128 DL 129 >gi|225020877|ref|ZP_03710069.1| hypothetical protein CORMATOL_00885 [Corynebacterium matruchotii ATCC 33806] gi|224946359|gb|EEG27568.1| hypothetical protein CORMATOL_00885 [Corynebacterium matruchotii ATCC 33806] Length = 364 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 + +T+ G+NG+GK++L EAI ++ + + R + + AV Sbjct: 1 MRLNPGITLFVGRNGHGKTNLVEAIGYVAHLGSHRVAQDAPLVRHGQPNARVSATAV 57 >gi|120402112|ref|YP_951941.1| SMC domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954930|gb|ABM11935.1| SMC domain protein [Mycobacterium vanbaalenii PYR-1] Length = 917 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + F F +EFA L +V+G N GKSS A G + + G + Sbjct: 1 MRIDRVIGAAFGPFRGET-LEFAPGLNVVHGPNEAGKSSWFNATYAALAGRRKYKGRGSA 59 >gi|330038514|ref|XP_003239618.1| structural maintenance of chromosomes 1 [Cryptomonas paramecium] gi|327206542|gb|AEA38720.1| structural maintenance of chromosomes 1 [Cryptomonas paramecium] Length = 1059 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 FK+ I+I +F+ + + + + + G+NG GK++L EA ++ Sbjct: 10 FKIQFIKIHNFKSYKKSSFFDTFETTGWITGKNGTGKTNLIEAFIFVCGET 60 >gi|327399161|ref|YP_004340030.1| SMC domain-containing protein [Hippea maritima DSM 10411] gi|327181790|gb|AEA33971.1| SMC domain protein [Hippea maritima DSM 10411] Length = 510 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L IEI +F E IE + LT + G++G GKS + +AI+ +F G+ Sbjct: 2 LRRIEIENFLTI-EKCTIEPSKGLTAIVGESGSGKSLILKAIDSVFSSKVDTGVVGNFGD 60 Query: 89 KRSIKTPMPMC 99 K +IK + Sbjct: 61 KTTIKLFFELN 71 >gi|241207093|ref|YP_002978189.1| recombination protein F [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860983|gb|ACS58650.1| DNA replication and repair protein RecF [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 374 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + H ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYAAAALTLDGRH-AVLTGDNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|238650460|ref|YP_002916312.1| DNA repair protein RecN [Rickettsia peacockii str. Rustic] gi|238624558|gb|ACR47264.1| DNA repair protein RecN [Rickettsia peacockii str. Rustic] Length = 545 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + +F + +IEF L ++ G+ G GKS L +AI + Sbjct: 4 SLSVKNF-ILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLG 47 >gi|149912066|ref|ZP_01900657.1| recombination protein F [Moritella sp. PE36] gi|149804862|gb|EDM64899.1| recombination protein F [Moritella sp. PE36] Length = 361 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L+ + + FR + ++ + I+ G NG GKSS+ EAI +L G + R Sbjct: 1 MGLVKLNFTDFRNI-KQASMQPGAGINIILGDNGSGKSSVLEAIHYLGLGRSFR 53 >gi|119513501|ref|ZP_01632523.1| DNA repair protein RecN [Nodularia spumigena CCY9414] gi|119461840|gb|EAW42855.1| DNA repair protein RecN [Nodularia spumigena CCY9414] Length = 575 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I +F + ++EF L ++ G+ G GKS + +AI+ G R Sbjct: 2 LLYLRIQNF-ALIDQLELEFGAGLNVLTGETGAGKSIILDAIDAALGGKVSSRV 54 >gi|50554987|ref|XP_504902.1| YALI0F02365p [Yarrowia lipolytica] gi|49650772|emb|CAG77704.1| YALI0F02365p [Yarrowia lipolytica] Length = 1099 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +E +F E KI+ +T V+GQNG+GKS++ A+ +F T R+ G+ Sbjct: 35 IRSVECINFMCH-ENLKIDVGPGITFVSGQNGHGKSAILNALIQVF--STDRKMKGE 88 >gi|309789625|ref|ZP_07684206.1| hypothetical protein OSCT_0157 [Oscillochloris trichoides DG6] gi|308228361|gb|EFO82008.1| hypothetical protein OSCT_0157 [Oscillochloris trichoides DG6] Length = 398 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F+ F E Q I F LT++ G N GKSS+ +A+ L + G ++ Sbjct: 2 IEQVHLHNFKCFAE-QTITFGP-LTLLVGANAAGKSSVIQALLLLRQSHLASMLQGGNLL 59 Query: 89 KRS 91 R Sbjct: 60 LRG 62 >gi|260773571|ref|ZP_05882487.1| hypothetical protein VIB_002045 [Vibrio metschnikovii CIP 69.14] gi|260612710|gb|EEX37913.1| hypothetical protein VIB_002045 [Vibrio metschnikovii CIP 69.14] Length = 553 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Query: 27 FKLLDIEI-SHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 K+ + I S F+ E ++F + +T+V G+NG GKS++ EA+ Sbjct: 1 MKVDKLHIRSRFKNL-ENVTVDFDEDHLMTVVVGRNGSGKSNVLEAL 46 >gi|225157625|ref|ZP_03725015.1| DNA replication and repair protein RecF [Opitutaceae bacterium TAV2] gi|224802692|gb|EEG20945.1| DNA replication and repair protein RecF [Opitutaceae bacterium TAV2] Length = 375 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L I + +FR I FAD L + G NG GK++L EA ++ + R Sbjct: 1 MRLRRITLQNFRN------IAFADLALDGRLQFLVGANGQGKTNLLEAAGFVTALRSFRT 54 Query: 82 KHGDSIKKRSI 92 + ++ Sbjct: 55 TDARILIRQGQ 65 >gi|120612011|ref|YP_971689.1| SMC domain-containing protein [Acidovorax citrulli AAC00-1] gi|120590475|gb|ABM33915.1| SMC domain protein [Acidovorax citrulli AAC00-1] Length = 437 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL + ++H GF E I F +T++ G NG GKS++ A+ L Sbjct: 1 MKLESLSLAHCGGF-EQLDIAFEPDVTLIAGVNGVGKSTVLHALTVLL 47 >gi|323488933|ref|ZP_08094170.1| DNA repair protein recN (recombination protein N) [Planococcus donghaensis MPA1U2] gi|323397325|gb|EGA90134.1| DNA repair protein recN (recombination protein N) [Planococcus donghaensis MPA1U2] Length = 565 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +++I +F + + FA+ LT++ G+ G GKS + +A+ L G R + I+ Sbjct: 2 LRELDIRNF-AIIDALTVSFAEGLTVLTGETGAGKSIIIDAVHLLAGG----RGSQEFIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGAKKAEIE 65 >gi|317491425|ref|ZP_07949861.1| hypothetical protein HMPREF0864_00624 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920972|gb|EFV42295.1| hypothetical protein HMPREF0864_00624 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 556 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L IEI FRG + ++ T++ G+N +GKSSL +A+ T Sbjct: 1 MYLERIEIVGFRGIN-RLSLTLDEN-TVLIGENAWGKSSLLDALTLCLSPNT 50 >gi|313906486|ref|ZP_07839820.1| AAA ATPase [Eubacterium cellulosolvens 6] gi|313468676|gb|EFR64044.1| AAA ATPase [Eubacterium cellulosolvens 6] Length = 365 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L ++I FRG ++ E ++ +V G N GK+S+ EAI+ L + + S Sbjct: 3 YLEKLQIDRFRGIKALKIHELK-NVNLVVGDNNCGKTSVLEAIQLLRTSGSLANVYQVSR 61 Query: 88 KKRSI 92 + SI Sbjct: 62 LRDSI 66 >gi|300864432|ref|ZP_07109303.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337576|emb|CBN54451.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 663 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEFADHL-------TIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F + Q I + + G NG GK++L +AI YG + Sbjct: 4 LELSLENFGPYQGKQIINLRPQIDEETRPIILFGGMNGGGKTTLMDAIRLCLYGNRAQ 61 >gi|90581122|ref|ZP_01236921.1| recombination protein F [Vibrio angustum S14] gi|90437643|gb|EAS62835.1| recombination protein F [Vibrio angustum S14] Length = 360 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR + A + G NG GK+S+ EAI +L +G + R Sbjct: 1 MALTRLMVHDFRNIASCD-LALAAGFNFLVGANGSGKTSVLEAIHYLGHGRSFRSHLTSR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|329728345|gb|EGG64782.1| RecF/RecN/SMC N-terminal domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 174 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|324327927|gb|ADY23187.1| ABC transporter ATP-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|302333196|gb|ADL23389.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|258423173|ref|ZP_05686066.1| DNA repair protein RecN [Staphylococcus aureus A9635] gi|257846623|gb|EEV70644.1| DNA repair protein RecN [Staphylococcus aureus A9635] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|257425645|ref|ZP_05602069.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 55/2053] gi|257428306|ref|ZP_05604704.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 65-1322] gi|257430943|ref|ZP_05607323.1| DNA repair protein [Staphylococcus aureus subsp. aureus 68-397] gi|257436545|ref|ZP_05612589.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M876] gi|282914327|ref|ZP_06322113.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M899] gi|282919296|ref|ZP_06327031.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C427] gi|282924621|ref|ZP_06332289.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C101] gi|293503402|ref|ZP_06667249.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 58-424] gi|293510418|ref|ZP_06669124.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M809] gi|293530958|ref|ZP_06671640.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M1015] gi|257271339|gb|EEV03485.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 55/2053] gi|257275147|gb|EEV06634.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 65-1322] gi|257278373|gb|EEV09009.1| DNA repair protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283896|gb|EEV14019.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M876] gi|282313456|gb|EFB43851.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C101] gi|282317106|gb|EFB47480.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C427] gi|282321508|gb|EFB51833.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M899] gi|290920226|gb|EFD97292.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M1015] gi|291095068|gb|EFE25333.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 58-424] gi|291466782|gb|EFF09302.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus M809] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|256842142|ref|ZP_05547647.1| DNA replication and repair protein recF [Parabacteroides sp. D13] gi|256736458|gb|EEU49787.1| DNA replication and repair protein recF [Parabacteroides sp. D13] Length = 365 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ + + I F+ + G NG GK++L +AI +L + + I Sbjct: 3 LKKLSVLNYKNILQSEVI-FSPKMNCFFGNNGMGKTNLLDAIHYLSFCKSHVNTPDSQII 61 Query: 89 KRSIK 93 Sbjct: 62 NSDQD 66 >gi|255016100|ref|ZP_05288226.1| putative DNA replication and repair protein [Bacteroides sp. 2_1_7] Length = 365 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ + + I F+ + G NG GK++L +AI +L + + I Sbjct: 3 LKKLSVLNYKNILQSEVI-FSPKMNCFFGNNGMGKTNLLDAIHYLSFCKSHVNTPDSQII 61 Query: 89 KRSIK 93 Sbjct: 62 NSDQD 66 >gi|229019231|ref|ZP_04176061.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1273] gi|229025477|ref|ZP_04181887.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1272] gi|228735759|gb|EEL86344.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1272] gi|228742064|gb|EEL92234.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1273] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|229134832|ref|ZP_04263640.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST196] gi|228648685|gb|EEL04712.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST196] Length = 241 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|229157605|ref|ZP_04285681.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 4342] gi|228625883|gb|EEK82634.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 4342] Length = 247 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 31 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 66 >gi|229162961|ref|ZP_04290917.1| ABC transporter, ATP-binding protein [Bacillus cereus R309803] gi|228620367|gb|EEK77237.1| ABC transporter, ATP-binding protein [Bacillus cereus R309803] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|229168765|ref|ZP_04296485.1| ABC transporter, ATP-binding protein [Bacillus cereus AH621] gi|228614702|gb|EEK71807.1| ABC transporter, ATP-binding protein [Bacillus cereus AH621] Length = 209 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 2 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 37 >gi|229174696|ref|ZP_04302222.1| ABC transporter, ATP-binding protein [Bacillus cereus MM3] gi|228608798|gb|EEK66094.1| ABC transporter, ATP-binding protein [Bacillus cereus MM3] Length = 241 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|282911158|ref|ZP_06318960.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus WBG10049] gi|282324853|gb|EFB55163.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus WBG10049] gi|312438012|gb|ADQ77083.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus TCH60] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|224542482|ref|ZP_03683021.1| hypothetical protein CATMIT_01665 [Catenibacterium mitsuokai DSM 15897] gi|224524596|gb|EEF93701.1| hypothetical protein CATMIT_01665 [Catenibacterium mitsuokai DSM 15897] Length = 103 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+I +R + +K E A + L ++ G N GKS+L EA+ G R Sbjct: 2 ITKIKIHGYRIY---KKFELAPNKRLNLIVGANEAGKSTLIEALTLALTGRINGRG 54 >gi|198275279|ref|ZP_03207810.1| hypothetical protein BACPLE_01438 [Bacteroides plebeius DSM 17135] gi|198271862|gb|EDY96132.1| hypothetical protein BACPLE_01438 [Bacteroides plebeius DSM 17135] Length = 1144 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I + E I+F D + ++ G G GKS+L +A+ Y T R Sbjct: 1 MKLQKLIIENIASI-EKACIDFEHGPLGEDSIFLICGPTGAGKSTLLDAVCLALYNTTPR 59 >gi|206977408|ref|ZP_03238304.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217961513|ref|YP_002340083.1| hypothetical protein BCAH187_A4149 [Bacillus cereus AH187] gi|222097472|ref|YP_002531529.1| ABC transporter ATP-binding protein [Bacillus cereus Q1] gi|229140757|ref|ZP_04269304.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST26] gi|229198146|ref|ZP_04324855.1| ABC transporter, ATP-binding protein [Bacillus cereus m1293] gi|206744399|gb|EDZ55810.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217067479|gb|ACJ81729.1| conserved hypothetical protein [Bacillus cereus AH187] gi|221241530|gb|ACM14240.1| ABC transporter ATP-binding protein [Bacillus cereus Q1] gi|228585306|gb|EEK43415.1| ABC transporter, ATP-binding protein [Bacillus cereus m1293] gi|228642730|gb|EEK99014.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST26] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|150006868|ref|YP_001301611.1| putative DNA replication and repair protein [Parabacteroides distasonis ATCC 8503] gi|262384383|ref|ZP_06077518.1| DNA replication and repair protein recF [Bacteroides sp. 2_1_33B] gi|298377294|ref|ZP_06987247.1| RecF protein [Bacteroides sp. 3_1_19] gi|301308691|ref|ZP_07214643.1| RecF protein [Bacteroides sp. 20_3] gi|166220722|sp|A6L8H5|RECF_PARD8 RecName: Full=DNA replication and repair protein recF gi|149935292|gb|ABR41989.1| putative DNA replication and repair protein [Parabacteroides distasonis ATCC 8503] gi|262294086|gb|EEY82019.1| DNA replication and repair protein recF [Bacteroides sp. 2_1_33B] gi|298265708|gb|EFI07368.1| RecF protein [Bacteroides sp. 3_1_19] gi|300833215|gb|EFK63833.1| RecF protein [Bacteroides sp. 20_3] Length = 365 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +++ + + I F+ + G NG GK++L +AI +L + + I Sbjct: 3 LKKLSVLNYKNILQSEVI-FSPKMNCFFGNNGMGKTNLLDAIHYLSFCKSHVNTPDSQII 61 Query: 89 KRSIK 93 Sbjct: 62 NSDQD 66 >gi|119897785|ref|YP_932998.1| hypothetical protein azo1494 [Azoarcus sp. BH72] gi|119670198|emb|CAL94111.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 930 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F + +E+ H+ + + + + G NG GK++L +A+ LF + +R Sbjct: 1 MFHIKTLELVHW-DYWRRFTLPLDAQIITIVGPNGSGKTTLLDAMRTLFALRCSGKRDFR 59 Query: 85 DSIKK 89 +++ Sbjct: 60 RYVRR 64 >gi|118479229|ref|YP_896380.1| ABC transporter ATP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|229186268|ref|ZP_04313435.1| ABC transporter, ATP-binding protein [Bacillus cereus BGSC 6E1] gi|118418454|gb|ABK86873.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|228597218|gb|EEK54871.1| ABC transporter, ATP-binding protein [Bacillus cereus BGSC 6E1] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|120402184|ref|YP_952013.1| hypothetical protein Mvan_1172 [Mycobacterium vanbaalenii PYR-1] gi|119955002|gb|ABM12007.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length = 1120 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F++ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHDIPFSEGGALIAGASGSGKSSLLDAI 48 >gi|88195326|ref|YP_500130.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87202884|gb|ABD30694.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|42783122|ref|NP_980369.1| hypothetical protein BCE_4075 [Bacillus cereus ATCC 10987] gi|42739050|gb|AAS42977.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 241 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|82751124|ref|YP_416865.1| DNA repair protein [Staphylococcus aureus RF122] gi|82656655|emb|CAI81081.1| DNA repair protein [Staphylococcus aureus RF122] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|49483769|ref|YP_040993.1| DNA repair protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282904102|ref|ZP_06311990.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C160] gi|282905929|ref|ZP_06313784.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus Btn1260] gi|282908839|ref|ZP_06316657.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus WW2703/97] gi|283958284|ref|ZP_06375735.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus A017934/97] gi|295428098|ref|ZP_06820730.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590936|ref|ZP_06949574.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus MN8] gi|49241898|emb|CAG40592.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282327103|gb|EFB57398.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331221|gb|EFB60735.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus Btn1260] gi|282595720|gb|EFC00684.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus C160] gi|283790433|gb|EFC29250.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus A017934/97] gi|295128456|gb|EFG58090.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575822|gb|EFH94538.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus MN8] gi|315195421|gb|EFU25808.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus CGS00] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|38233621|ref|NP_939388.1| ATP-binding protein [Corynebacterium diphtheriae NCTC 13129] gi|38199881|emb|CAE49547.1| Conserved hypothetical ATP-binding protein [Corynebacterium diphtheriae] Length = 854 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ +EI H R T + + ++ + +++G+N GKS++ EAI+ + Sbjct: 1 MRIRSLEIEHMRAITHLVLKDLPSNGVIVISGENERGKSTIMEAIKLVLGE 51 >gi|21283201|ref|NP_646289.1| DNA repair protein [Staphylococcus aureus subsp. aureus MW2] gi|49486356|ref|YP_043577.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57650476|ref|YP_186405.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus COL] gi|87160403|ref|YP_494164.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221637|ref|YP_001332459.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus str. Newman] gi|161509748|ref|YP_001575407.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140060|ref|ZP_03564553.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732173|ref|ZP_04866338.1| DNA repair protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733231|ref|ZP_04867396.1| DNA repair protein [Staphylococcus aureus subsp. aureus TCH130] gi|258451177|ref|ZP_05699212.1| DNA repair protein RecN [Staphylococcus aureus A5948] gi|262049105|ref|ZP_06021982.1| DNA repair protein [Staphylococcus aureus D30] gi|262051186|ref|ZP_06023410.1| DNA repair protein [Staphylococcus aureus 930918-3] gi|282924768|ref|ZP_06332435.1| DNA repair protein RecN [Staphylococcus aureus A9765] gi|284024579|ref|ZP_06378977.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 132] gi|294848550|ref|ZP_06789296.1| DNA repair protein RecN [Staphylococcus aureus A9754] gi|297207761|ref|ZP_06924196.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911842|ref|ZP_07129285.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus TCH70] gi|304380892|ref|ZP_07363552.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204641|dbj|BAB95337.1| DNA repair protein [Staphylococcus aureus subsp. aureus MW2] gi|49244799|emb|CAG43245.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284662|gb|AAW36756.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus COL] gi|87126377|gb|ABD20891.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374437|dbj|BAF67697.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus str. Newman] gi|160368557|gb|ABX29528.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724128|gb|EES92857.1| DNA repair protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728771|gb|EES97500.1| DNA repair protein [Staphylococcus aureus subsp. aureus TCH130] gi|257861232|gb|EEV84045.1| DNA repair protein RecN [Staphylococcus aureus A5948] gi|259160823|gb|EEW45843.1| DNA repair protein [Staphylococcus aureus 930918-3] gi|259162774|gb|EEW47339.1| DNA repair protein [Staphylococcus aureus D30] gi|269941010|emb|CBI49394.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus TW20] gi|282592775|gb|EFB97781.1| DNA repair protein RecN [Staphylococcus aureus A9765] gi|294824576|gb|EFG40999.1| DNA repair protein RecN [Staphylococcus aureus A9754] gi|296887778|gb|EFH26676.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886088|gb|EFK81290.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus TCH70] gi|302751351|gb|ADL65528.1| putative DNA repair protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340619|gb|EFM06553.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198786|gb|EFU29114.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus CGS01] gi|320140595|gb|EFW32449.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus MRSA131] gi|320144132|gb|EFW35901.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus MRSA177] gi|329314197|gb|AEB88610.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus T0131] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|145225735|ref|YP_001136413.1| hypothetical protein Mflv_5159 [Mycobacterium gilvum PYR-GCK] gi|145218221|gb|ABP47625.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length = 1126 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F++ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHDIPFSEGGALIAGASGSGKSSLLDAI 48 >gi|89073741|ref|ZP_01160255.1| hypothetical ATP-dependent endonuclease, OLD family protein [Photobacterium sp. SKA34] gi|89050516|gb|EAR56008.1| hypothetical ATP-dependent endonuclease, OLD family protein [Photobacterium sp. SKA34] Length = 552 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L IEIS FRG + + F + LT++ G+N +GKSSL +A+ ++ Sbjct: 1 MHLERIEISGFRGI-KRLSLSFKE-LTVLIGENAWGKSSLLDALCLALSPDSE 51 >gi|47565903|ref|ZP_00236942.1| ABC transporter, ATP-binding protein [Bacillus cereus G9241] gi|47557183|gb|EAL15512.1| ABC transporter, ATP-binding protein [Bacillus cereus G9241] Length = 250 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|15924509|ref|NP_372043.1| DNA repair protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927100|ref|NP_374633.1| DNA repair protein [Staphylococcus aureus subsp. aureus N315] gi|148268004|ref|YP_001246947.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus JH9] gi|150394071|ref|YP_001316746.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus JH1] gi|156979838|ref|YP_001442097.1| DNA repair protein [Staphylococcus aureus subsp. aureus Mu3] gi|253314889|ref|ZP_04838102.1| DNA repair protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006306|ref|ZP_05144907.2| DNA repair protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793596|ref|ZP_05642575.1| DNA repair protein RecN [Staphylococcus aureus A9781] gi|258411104|ref|ZP_05681384.1| DNA repair protein RecN [Staphylococcus aureus A9763] gi|258420092|ref|ZP_05683047.1| DNA repair protein RecN [Staphylococcus aureus A9719] gi|258437352|ref|ZP_05689336.1| DNA repair protein RecN [Staphylococcus aureus A9299] gi|258443558|ref|ZP_05691897.1| DNA repair protein RecN [Staphylococcus aureus A8115] gi|258446765|ref|ZP_05694919.1| DNA repair protein RecN [Staphylococcus aureus A6300] gi|258448679|ref|ZP_05696791.1| DNA repair protein RecN [Staphylococcus aureus A6224] gi|258453496|ref|ZP_05701474.1| DNA repair protein RecN [Staphylococcus aureus A5937] gi|269203149|ref|YP_003282418.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ED98] gi|282893021|ref|ZP_06301255.1| DNA repair protein RecN [Staphylococcus aureus A8117] gi|282916790|ref|ZP_06324548.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus D139] gi|282928991|ref|ZP_06336578.1| DNA repair protein RecN [Staphylococcus aureus A10102] gi|283770596|ref|ZP_06343488.1| DNA repair protein RecN (Recombination protein N) [Staphylococcus aureus subsp. aureus H19] gi|295406642|ref|ZP_06816447.1| DNA repair protein RecN [Staphylococcus aureus A8819] gi|296275124|ref|ZP_06857631.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus MR1] gi|297245775|ref|ZP_06929640.1| DNA repair protein RecN [Staphylococcus aureus A8796] gi|13701318|dbj|BAB42612.1| DNA repair protein [Staphylococcus aureus subsp. aureus N315] gi|14247290|dbj|BAB57681.1| DNA repair protein [Staphylococcus aureus subsp. aureus Mu50] gi|147741073|gb|ABQ49371.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus JH9] gi|149946523|gb|ABR52459.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus JH1] gi|156721973|dbj|BAF78390.1| DNA repair protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787568|gb|EEV25908.1| DNA repair protein RecN [Staphylococcus aureus A9781] gi|257840254|gb|EEV64718.1| DNA repair protein RecN [Staphylococcus aureus A9763] gi|257843803|gb|EEV68197.1| DNA repair protein RecN [Staphylococcus aureus A9719] gi|257848557|gb|EEV72545.1| DNA repair protein RecN [Staphylococcus aureus A9299] gi|257850964|gb|EEV74907.1| DNA repair protein RecN [Staphylococcus aureus A8115] gi|257854340|gb|EEV77289.1| DNA repair protein RecN [Staphylococcus aureus A6300] gi|257857957|gb|EEV80846.1| DNA repair protein RecN [Staphylococcus aureus A6224] gi|257864227|gb|EEV86977.1| DNA repair protein RecN [Staphylococcus aureus A5937] gi|262075439|gb|ACY11412.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ED98] gi|282319277|gb|EFB49629.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus D139] gi|282589398|gb|EFB94489.1| DNA repair protein RecN [Staphylococcus aureus A10102] gi|282764339|gb|EFC04465.1| DNA repair protein RecN [Staphylococcus aureus A8117] gi|283460743|gb|EFC07833.1| DNA repair protein RecN (Recombination protein N) [Staphylococcus aureus subsp. aureus H19] gi|283470798|emb|CAQ50009.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ST398] gi|285817202|gb|ADC37689.1| DNA repair protein RecN [Staphylococcus aureus 04-02981] gi|294968389|gb|EFG44413.1| DNA repair protein RecN [Staphylococcus aureus A8819] gi|297177426|gb|EFH36678.1| DNA repair protein RecN [Staphylococcus aureus A8796] gi|298694802|gb|ADI98024.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ED133] gi|312829909|emb|CBX34751.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129797|gb|EFT85787.1| DNA repair protein [Staphylococcus aureus subsp. aureus CGS03] gi|323440417|gb|EGA98129.1| DNA repair protein [Staphylococcus aureus O11] gi|323443191|gb|EGB00809.1| DNA repair protein [Staphylococcus aureus O46] gi|329727183|gb|EGG63639.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 21172] gi|329730844|gb|EGG67222.1| DNA repair protein RecN [Staphylococcus aureus subsp. aureus 21193] Length = 559 Score = 40.7 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F E +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIEELEIQFSDGLTVLSGETGSGKSIIIDAI 42 >gi|329890827|ref|ZP_08269170.1| ATP-dependent OLD family endonuclease [Brevundimonas diminuta ATCC 11568] gi|328846128|gb|EGF95692.1| ATP-dependent OLD family endonuclease [Brevundimonas diminuta ATCC 11568] Length = 669 Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 14/81 (17%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I ++R + + TI+ G N GK+++ +A++ + +R D+ Sbjct: 1 MKLKTAHIQNYRSVCDTGVFDVETAKTILVGPNEAGKTAVLQALQQVNPPEGVKRL--DA 58 Query: 87 IKKRSIKTPMPMCMAVPRCKY 107 ++ PR KY Sbjct: 59 LRD------------YPRSKY 67 >gi|153868790|ref|ZP_01998533.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152074633|gb|EDN71469.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 591 Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 7/65 (10%) Query: 14 SKSLTSYYARKL--IFKLLDIEISHFR----GFTEIQKIEFADH-LTIVNGQNGYGKSSL 66 SK+ T +A++L K + S FR + ++ ++F H ++++ G NG GKS+ Sbjct: 201 SKNYTITHAKQLESCPKENTVTFSGFRLLIQNYRVLKSVDFETHDVSLIVGPNGSGKSTF 260 Query: 67 SEAIE 71 ++ Sbjct: 261 LNSLT 265 >gi|327402040|ref|YP_004342878.1| DNA repair protein RecN [Fluviicola taffensis DSM 16823] gi|327317548|gb|AEA42040.1| DNA repair protein RecN [Fluviicola taffensis DSM 16823] Length = 548 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F E ++F D L ++ G+ G GKS L A+ + + + K Sbjct: 2 LKSLSVQNF-ALIEHVSLQFHDGLHVITGETGSGKSILLGALNLILGERSDFSVIRNPEK 60 Query: 89 KRSIKTPMPMC 99 K ++ + Sbjct: 61 KTVVEAVFDLN 71 >gi|311992855|ref|YP_004009722.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj61] gi|295815144|gb|ADG36070.1| gp46 recombination endonuclease subunit [Acinetobacter phage Acj61] Length = 559 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 FKL + + + + +I A H T++ G+NG GKS++ EAI + +G R Sbjct: 4 FKLNSVAYKNIMSVGDTEIRIALDAHHKTLITGKNGGGKSTMLEAITFALFGKPFRDIKK 63 Query: 85 DSIKKRSIKTPMPMCMAV 102 + K + + +A+ Sbjct: 64 GQLVNSVTKKALLVELAM 81 >gi|262370072|ref|ZP_06063399.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315111|gb|EEY96151.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 454 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 13/96 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLS----EAIEWLFYGYTQ 79 K+ I + H F ++ K++F+ +T++ G GK+S+ +A+ W Y Sbjct: 1 MKIQSIHLKHILHFADL-KVDFSYHDKPVTLILGDQASGKTSILRFSYQALTWFAARYKD 59 Query: 80 RRKHGDSIKKRSI-----KTPMPMCMAVPRCKYQLK 110 R G + I ++ + + +AVP Y LK Sbjct: 60 LRSAGVVMLDHDIMLNRLQSKIDIQVAVPAELYALK 95 >gi|260590842|ref|ZP_05856300.1| RecF protein [Prevotella veroralis F0319] gi|260537193|gb|EEX19810.1| RecF protein [Prevotella veroralis F0319] Length = 368 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ E ++ + L G NG GK++L +A+ +L + + Sbjct: 1 MQLNKLSIINYKNI-EAATLDLSAKLNCFIGHNGEGKTNLLDAVYYLSFCRSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VMRHDAD 66 >gi|209946208|gb|ACI97335.1| RAD50 [Drosophila melanogaster] Length = 630 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946150|gb|ACI97306.1| RAD50 [Drosophila yakuba] Length = 633 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|307153460|ref|YP_003888844.1| DNA repair protein RecN [Cyanothece sp. PCC 7822] gi|306983688|gb|ADN15569.1| DNA repair protein RecN [Cyanothece sp. PCC 7822] Length = 586 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I +F + ++EF L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSVLRIQNF-TLIDQLELEFGPKLNVLTGETGAGKSIILDAIDIVLGGKVNNRL 54 >gi|307154040|ref|YP_003889424.1| SMC domain-containing protein [Cyanothece sp. PCC 7822] gi|306984268|gb|ADN16149.1| SMC domain protein [Cyanothece sp. PCC 7822] Length = 435 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL---FYGYTQRRKHGD 85 L I +F+ F + + + + T++ G+N GKS++ +A+ +L GY G+ Sbjct: 2 LKKIRFKNFKNFQDAE-LSLG-NFTLLVGENATGKSNIRDALRFLHGIARGYNIAEIIGE 59 Query: 86 S 86 Sbjct: 60 K 60 >gi|218246354|ref|YP_002371725.1| ATPase-like protein [Cyanothece sp. PCC 8801] gi|218166832|gb|ACK65569.1| ATPase-like protein [Cyanothece sp. PCC 8801] Length = 131 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL+ I +F+ ++ + F D LTI+ G N GKS+ EA+ +L Sbjct: 3 LKLISANIQNFKSLGDVT-LNFRD-LTILVGANSSGKSNCLEALNFL 47 >gi|160894549|ref|ZP_02075325.1| hypothetical protein CLOL250_02101 [Clostridium sp. L2-50] gi|156863860|gb|EDO57291.1| hypothetical protein CLOL250_02101 [Clostridium sp. L2-50] Length = 567 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + F F + I L ++ G N GK+++ E I + YG + R G Sbjct: 1 MYINKLLLKEFGKFNNKE-IRLKKGLNLIYGANESGKTTVKEFIVGMLYGIDKTRGIGAR 59 Query: 87 IKKRSIKTP 95 + ++ P Sbjct: 60 LDNYELRKP 68 >gi|12805151|gb|AAH02033.1| Rad50 protein [Mus musculus] Length = 54 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 28 KLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSEA 69 ++ + I R F + Q I F LTI+ G NG GK+ EA Sbjct: 3 RIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTVSPEA 48 >gi|49481959|gb|AAT66691.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A84] Length = 573 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELXIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|325279340|ref|YP_004251882.1| SMC domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311149|gb|ADY31702.1| SMC domain protein [Odoribacter splanchnicus DSM 20712] Length = 1241 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I+ + I+F + + + G G GKS++ +AI + R Sbjct: 1 MKILRIQGKNLASIAGEFDIDFTAAPLRSAGIFAICGPTGAGKSTILDAICLALFNNMPR 60 Query: 81 --RKHGDSIKKRSIK 93 G + + Sbjct: 61 TTGIEGTKMPDVGQE 75 >gi|319943268|ref|ZP_08017551.1| DNA repair protein RecN [Lautropia mirabilis ATCC 51599] gi|319743810|gb|EFV96214.1| DNA repair protein RecN [Lautropia mirabilis ATCC 51599] Length = 551 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 E +IEF T++ G+ G GKS L +A+ + G Sbjct: 14 ESAEIEFGPGFTVLTGETGAGKSILLDAMGLVLGG 48 >gi|307594964|ref|YP_003901281.1| hypothetical protein Vdis_0838 [Vulcanisaeta distributa DSM 14429] gi|307550165|gb|ADN50230.1| conserved hypothetical protein [Vulcanisaeta distributa DSM 14429] Length = 358 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L+ I F+G I+ + T++ G++G GK+S EA+ L Sbjct: 5 RLVRAVIKGFKGLGRGLTIDL-NGNTVIVGRSGSGKTSFMEALALLM 50 >gi|307717720|ref|YP_003873252.1| DNA replication and repair protein RecF [Spirochaeta thermophila DSM 6192] gi|306531445|gb|ADN00979.1| DNA replication and repair protein RecF [Spirochaeta thermophila DSM 6192] Length = 363 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 L I FR I+ + + G+NG GK+++ E + L YG + R + + + Sbjct: 3 LTIGSEGFRNIVTGT-IDVGAPVVVFVGENGQGKTNILELVYLLCYGVSFRTRQNTFLIR 61 Query: 90 RS 91 R Sbjct: 62 RG 63 >gi|302327508|gb|ADL26709.1| nuclease, ATP-dependent, OLD family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 592 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L I IS+ R + + +D T + G N GK+++ I WL ++ Sbjct: 6 LRLSRITISNLRSI-QRETFPLSD-FTALIGYNNAGKTNILMGIRWLLANFS 55 >gi|258645381|ref|ZP_05732850.1| DNA repair protein RecN [Dialister invisus DSM 15470] gi|260402730|gb|EEW96277.1| DNA repair protein RecN [Dialister invisus DSM 15470] Length = 554 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F E IE D T+ G+ G GKS L +A+ L RR D I+ Sbjct: 2 LQSLHIVNF-AIIEDTIIELTDGATVFTGETGAGKSILIDALAILLG----RRARTDLIR 56 >gi|261416708|ref|YP_003250391.1| DNA repair protein RecN [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373164|gb|ACX75909.1| DNA repair protein RecN [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326269|gb|ADL25470.1| DNA repair protein RecN [Fibrobacter succinogenes subsp. succinogenes S85] Length = 549 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I+ F E + F + T + G+ G GKS L +A+ + +Q Sbjct: 2 LKQLTINSFTLIAE-ASVPFHEGFTAITGETGAGKSVLMKALRMVCGDKSQASM 54 >gi|261415085|ref|YP_003248768.1| hypothetical protein Fisuc_0674 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371541|gb|ACX74286.1| conserved hypothetical protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 592 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L I IS+ R + + +D T + G N GK+++ I WL ++ Sbjct: 6 LRLSRITISNLRSI-QRETFPLSD-FTALIGYNNAGKTNILMGIRWLLANFS 55 >gi|238027144|ref|YP_002911375.1| DNA repair ATPase [Burkholderia glumae BGR1] gi|237876338|gb|ACR28671.1| ATPase involved in DNA repair [Burkholderia glumae BGR1] Length = 589 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ I + G I + + G NG GKSSL EA+ G T R Sbjct: 1 MKITGIYAQNVLGVRS-ADIRLGQPIALFAGPNGAGKSSLQEAVRMALTGDTVR 53 >gi|225868940|ref|YP_002744888.1| DNA repair protein [Streptococcus equi subsp. zooepidemicus] gi|225702216|emb|CAW99951.1| putative DNA repair protein [Streptococcus equi subsp. zooepidemicus] Length = 553 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ L Sbjct: 2 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMLLG 47 >gi|225870052|ref|YP_002745999.1| DNA repair protein [Streptococcus equi subsp. equi 4047] gi|225699456|emb|CAW92962.1| putative DNA repair protein [Streptococcus equi subsp. equi 4047] Length = 553 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ L Sbjct: 2 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMLLG 47 >gi|209524198|ref|ZP_03272748.1| SMC domain protein [Arthrospira maxima CS-328] gi|209495289|gb|EDZ95594.1| SMC domain protein [Arthrospira maxima CS-328] Length = 435 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +IE+ F+ + + LT++ G N GKS++ EA+ L T R Sbjct: 2 ITEIELKDFKSYKSAT-LHLGR-LTVLIGANASGKSNVIEALRLLSRLATGERL 53 >gi|195977758|ref|YP_002123002.1| DNA repair protein RecN [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974463|gb|ACG61989.1| DNA repair protein RecN [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 566 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ L Sbjct: 15 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMLLG 60 >gi|300871571|ref|YP_003786444.1| repair and genetic recombination protein [Brachyspira pilosicoli 95/1000] gi|300689272|gb|ADK31943.1| repair and genetic recombination protein [Brachyspira pilosicoli 95/1000] Length = 575 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L ++I +F + KI F + ++ G+ G GKS + A+E + R G Sbjct: 2 LKYLDIRNF-VLIDKVKINFENGFNVLTGETGAGKSIIISALELITGEKGSTRMVG 56 >gi|255657913|ref|ZP_05403322.1| SbcC exonuclease family protein [Mitsuokella multacida DSM 20544] gi|260850105|gb|EEX70112.1| SbcC exonuclease family protein [Mitsuokella multacida DSM 20544] Length = 1023 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + I F + + ++F+ +++G G GK+S+ +AI + YG Sbjct: 1 MKPEILTICAFGPYQKKVCLDFSILSEQPFFLIHGATGAGKTSIFDAICYALYGEAATEA 60 Query: 83 HGDSIKKRSIKTP 95 + + P Sbjct: 61 RTPRMLRNREAGP 73 >gi|168209101|ref|ZP_02634726.1| putative ATPase involved in DNA repair [Clostridium perfringens B str. ATCC 3626] gi|170712783|gb|EDT24965.1| putative ATPase involved in DNA repair [Clostridium perfringens B str. ATCC 3626] Length = 797 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 27 FKLLDIEISHFRGFTEIQ----KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I + +F+ L ++G NG+GK+++ +AIE F +R Sbjct: 3 YYINKIYMKNFKCIKNETGVLVNFNLDKGLIALSGPNGFGKTTIFDAIELSFCDKIER 60 >gi|150020976|ref|YP_001306330.1| DNA repair ATPase-like protein [Thermosipho melanesiensis BI429] gi|149793497|gb|ABR30945.1| ATPase involved in DNA repair-like protein [Thermosipho melanesiensis BI429] Length = 741 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 27 FKLLDIEISHFRGFT---EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ ++I+ RGF I + + G+NG GK S +A+EW G + Sbjct: 1 MKIKTVKINGIRGFQYHEAPHVISLDCNHFFLFGENGTGKFSFFDALEWGLTG----DVN 56 Query: 84 GDSIKKRSIKTP 95 ++K K Sbjct: 57 ETRVRKVGSKQE 68 >gi|71279238|ref|YP_269570.1| hypothetical protein CPS_2865 [Colwellia psychrerythraea 34H] gi|71144978|gb|AAZ25451.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 883 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L S K ++ + GF + I +++HL + G G GKS+L E+I ++ Sbjct: 251 LNSDIKEKYYSRIEAVRFVG--GFLDGIHINYSEHLNALIGGRGTGKSTLIESIRYVL 306 >gi|295706543|ref|YP_003599618.1| DNA repair protein RecN [Bacillus megaterium DSM 319] gi|294804202|gb|ADF41268.1| DNA repair protein RecN [Bacillus megaterium DSM 319] Length = 575 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F + + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGG 48 >gi|294501196|ref|YP_003564896.1| DNA repair protein RecN [Bacillus megaterium QM B1551] gi|294351133|gb|ADE71462.1| DNA repair protein RecN [Bacillus megaterium QM B1551] Length = 575 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F + + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGG 48 >gi|258542324|ref|YP_003187757.1| recombination protein F [Acetobacter pasteurianus IFO 3283-01] gi|256633402|dbj|BAH99377.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-01] gi|256636461|dbj|BAI02430.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-03] gi|256639514|dbj|BAI05476.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-07] gi|256642570|dbj|BAI08525.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-22] gi|256645625|dbj|BAI11573.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-26] gi|256648678|dbj|BAI14619.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-32] gi|256651731|dbj|BAI17665.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654722|dbj|BAI20649.1| DNA replication and repair protein RecF [Acetobacter pasteurianus IFO 3283-12] Length = 382 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +LL + +S+FR + E L ++ G+NG GK++L EA+ Sbjct: 13 RLLKLTLSNFRNY-ERLAWSPDASLLVLTGENGSGKTNLLEAV 54 >gi|224023447|ref|ZP_03641813.1| hypothetical protein BACCOPRO_00147 [Bacteroides coprophilus DSM 18228] gi|224016669|gb|EEF74681.1| hypothetical protein BACCOPRO_00147 [Bacteroides coprophilus DSM 18228] Length = 371 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + +I I F+ F + Q I + + ++ G+NG GKS+++++ +L T + + Sbjct: 2 IKNITIEGFKCFHKRQSIPLS-QINLLYGKNGRGKSTIAQS--FLLLAQTMKECND 54 >gi|184157182|ref|YP_001845521.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii ACICU] gi|183208776|gb|ACC56174.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii ACICU] gi|322507079|gb|ADX02533.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Acinetobacter baumannii 1656-2] Length = 573 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 I +L I+++HFRG I+ I D LT++ G+NG KS++ Sbjct: 5 ITQLKKIKVNHFRGLKNIE-INLGDRLTVICGKNGTSKSTIL 45 >gi|322412217|gb|EFY03125.1| DNA repair protein recN [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 553 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMTMMLG 47 >gi|307353310|ref|YP_003894361.1| ATPase [Methanoplanus petrolearius DSM 11571] gi|307156543|gb|ADN35923.1| ATPase [Methanoplanus petrolearius DSM 11571] Length = 415 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------FYGYTQR 80 ++ ++ + ++R +++ ++ T+ G NG GKS++ + +L G + Sbjct: 9 RIEELTVKNYRTLRDLE-LKSLTPFTVFLGPNGSGKSTIFDVFAFLSECFQSGLKGAWNK 67 Query: 81 RKHGDSIKKRSI 92 R ++ R + Sbjct: 68 RGRFKELRSRGV 79 >gi|283786307|ref|YP_003366172.1| hypothetical protein ROD_26321 [Citrobacter rodentium ICC168] gi|282949761|emb|CBG89380.1| hypothetical prophage protein [Citrobacter rodentium ICC168] Length = 595 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 I KL I + FRG I IEF LT++ G+NG KS++ Sbjct: 23 ITKLKKINVVKFRGLKNIN-IEFGSRLTVICGKNGTSKSTIL 63 >gi|262395490|ref|YP_003287343.1| ATP-dependent endonuclease [Vibrio sp. Ex25] gi|262339084|gb|ACY52878.1| ATP-dependent endonuclease [Vibrio sp. Ex25] Length = 544 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ G + + Sbjct: 1 MRLERIEISGFRGI-KRLSLSF-DELTTLIGENTWGKSSLLDALSIALPANGSLYQFELK 58 Query: 85 DSIKKRSIKTPMPMCMAVPRC 105 D SI P + + C Sbjct: 59 DFHVDYSISHPQTQHLQIIVC 79 >gi|261345459|ref|ZP_05973103.1| DNA repair protein RecN [Providencia rustigianii DSM 4541] gi|282566506|gb|EFB72041.1| DNA repair protein RecN [Providencia rustigianii DSM 4541] Length = 553 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTINNFAIVRELE-IDFRSGMTTITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|212710681|ref|ZP_03318809.1| hypothetical protein PROVALCAL_01747 [Providencia alcalifaciens DSM 30120] gi|212686762|gb|EEB46290.1| hypothetical protein PROVALCAL_01747 [Providencia alcalifaciens DSM 30120] Length = 553 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LTQLTINNFAIVRELE-IDFRSGMTTITGETGAGKSIAIDALGLCLGNRGEANM 54 >gi|167461554|ref|ZP_02326643.1| recombination protein F [Paenibacillus larvae subsp. larvae BRL-230010] Length = 377 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + H+R + ++ + ++ I G N GK++L E+I L + R H Sbjct: 1 MFLQRLTLHHYRNYQHVELVT-DRNVNIFVGPNAQGKTNLLESIYVLALTKSHRTHHDKE 59 Query: 87 IKK 89 + + Sbjct: 60 LIQ 62 >gi|187734858|ref|YP_001876970.1| ATP-binding protein [Akkermansia muciniphila ATCC BAA-835] gi|187424910|gb|ACD04189.1| putative ATP-binding protein [Akkermansia muciniphila ATCC BAA-835] Length = 358 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE----AIEWLFYG-------- 76 + D+ +S F + EF + +V G N GKS L + +W G Sbjct: 2 IHDLLVSGVTVFPGREHFEFVPGINVVVGGNDSGKSHLLKLCYTVAKWSADGGRKSLPEK 61 Query: 77 -YTQRRKHGDSIK 88 ++R D ++ Sbjct: 62 WAEEQRLRKDLMR 74 >gi|9965743|gb|AAG10148.1|AF250342_1 SMC-related protein MSS2 [Arabidopsis thaliana] Length = 284 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F F + L +V G NG GKSSL AI G Q S+ Sbjct: 23 IIEIELHNFMTFNHLVCKP-GSRLNLVIGPNGSGKSSLVCAIALCLGGEPQLLGRATSV 80 >gi|56477180|ref|YP_158769.1| exonuclease SbcC [Aromatoleum aromaticum EbN1] gi|56313223|emb|CAI07868.1| Exonuclease SbcC [Aromatoleum aromaticum EbN1] Length = 1282 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I ++ +I+F + L ++G G GKS+L +A+ + T R Sbjct: 1 MKILAIRGNNLASLAGAFEIDFQAEPLASTGLFAISGPTGAGKSTLLDALCLALFDDTPR 60 Query: 81 ----RKHGDSIKKRSIKTPMP 97 G + +T +P Sbjct: 61 LRNAGGRGIELPDVGTETTLP 81 >gi|157825165|ref|YP_001492885.1| recombination protein F [Rickettsia akari str. Hartford] gi|166221858|sp|A8GLV2|RECF_RICAH RecName: Full=DNA replication and repair protein recF gi|157799123|gb|ABV74377.1| recombination protein F [Rickettsia akari str. Hartford] Length = 360 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++++R F ++ ++ + I+ G+NG GK+++ EAI + G R D Sbjct: 4 IFLHSLSLANYRNFKNLE-LKTDNTPIILIGENGSGKTNILEAISLFYPGRGLRSAKLDD 62 Query: 87 IKKRSIK 93 I K S Sbjct: 63 ICKASED 69 >gi|296504516|ref|YP_003666216.1| ABC transporter ATP-binding protein [Bacillus thuringiensis BMB171] gi|296325568|gb|ADH08496.1| ABC transporter ATP-binding protein [Bacillus thuringiensis BMB171] Length = 241 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q ++F ++T + G+NG GKS+L E I + Sbjct: 34 QSLDFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|229047713|ref|ZP_04193294.1| ABC transporter, ATP-binding protein [Bacillus cereus AH676] gi|229129303|ref|ZP_04258274.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-Cer4] gi|229146597|ref|ZP_04274964.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST24] gi|228636767|gb|EEK93230.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST24] gi|228653908|gb|EEL09775.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-Cer4] gi|228723633|gb|EEL74997.1| ABC transporter, ATP-binding protein [Bacillus cereus AH676] Length = 250 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q ++F ++T + G+NG GKS+L E I + Sbjct: 34 QSLDFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|94994731|ref|YP_602829.1| DNA repair protein recN [Streptococcus pyogenes MGAS10750] gi|94548239|gb|ABF38285.1| DNA repair protein recN [Streptococcus pyogenes MGAS10750] Length = 242 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + Sbjct: 14 VMLLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEV 68 Query: 87 IKKRSIKTPMP 97 I++ + K + Sbjct: 69 IRRGANKAEIE 79 >gi|94988852|ref|YP_596953.1| DNA repair protein [Streptococcus pyogenes MGAS9429] gi|94992743|ref|YP_600842.1| DNA repair protein recN [Streptococcus pyogenes MGAS2096] gi|94542360|gb|ABF32409.1| DNA repair protein [Streptococcus pyogenes MGAS9429] gi|94546251|gb|ABF36298.1| DNA repair protein recN [Streptococcus pyogenes MGAS2096] Length = 567 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + Sbjct: 14 VMLLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEV 68 Query: 87 IKKRSIKTPMP 97 I++ + K + Sbjct: 69 IRRGANKAEIE 79 >gi|77465761|ref|YP_355264.1| hypothetical protein RSP_3757 [Rhodobacter sphaeroides 2.4.1] gi|77390179|gb|ABA81363.1| Conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 532 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I ++R + + F D L ++ G N GKS+L EAI G Sbjct: 1 MFIQRAVIRNYRCLKQAN-VTFNDKLNVIVGNNECGKSTLLEAIHLALTGQ 50 >gi|30022109|ref|NP_833740.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] gi|29897666|gb|AAP10941.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] Length = 250 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q ++F ++T + G+NG GKS+L E I + Sbjct: 34 QSLDFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|37524035|ref|NP_927379.1| recombination protein F [Photorhabdus luminescens subsp. laumondii TTO1] gi|51316319|sp|Q7NAD1|RECF_PHOLL RecName: Full=DNA replication and repair protein recF gi|36783458|emb|CAE12298.1| DNA replication and repair protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 363 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I FR + A + G NG GK+S+ EAI L +G + R Sbjct: 1 MTLTRLLIRDFRNIAA-ADLPLATGFNFLVGSNGSGKTSVLEAIYTLGHGRSFRSIQ 56 >gi|330885759|gb|EGH19908.1| putative ATP-dependent endonuclease of the OLD family [Pseudomonas syringae pv. glycinea str. race 4] Length = 711 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + +++ ++R F + F + + G+NG GK++L A Sbjct: 1 MHISRLQLVNYRNFKCANVV-FNKGVNTIIGENGSGKTNLFRA 42 >gi|319898311|ref|YP_004158404.1| DNA replication and repair protein [Bartonella clarridgeiae 73] gi|319402275|emb|CBI75814.1| DNA replication and repair protein [Bartonella clarridgeiae 73] Length = 380 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++++++R + + H+ ++ G+NG GK++L EA+ +L G RR Sbjct: 11 VAVRQLKLANYRNYCSLVLHLLGQHV-VLTGRNGAGKTNLLEALSFLSPGRGLRRAAYSD 69 Query: 87 IKKRSIK 93 + K Sbjct: 70 VSFSERK 76 >gi|326784302|ref|YP_004324744.1| recombination endonuclease subunit [Synechococcus phage S-SSM5] gi|310003533|gb|ADO97929.1| recombination endonuclease subunit [Synechococcus phage S-SSM5] Length = 573 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK- 82 + +I+ +F + +I ++ T++ G NG GKS+L +A+ + + R+ Sbjct: 1 MIVFENIKWKNFLSTGDQWTEINLSESPSTLIVGANGAGKSTLLDALCFALFNKPFRKIS 60 Query: 83 HGDSIKKRSIK-TPMPMCMAVPRCKYQL 109 G + + K + +C ++ R +Y++ Sbjct: 61 RGQLVNSINEKGLKVEVCFSIGRDEYRV 88 >gi|289628784|ref|ZP_06461738.1| putative ATP-dependent endonuclease of the OLD family [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870251|gb|EGH04960.1| putative ATP-dependent endonuclease of the OLD family [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 711 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 + +++ ++R F + F + + G+NG GK++L A Sbjct: 1 MHISRLQLVNYRNFKCANVV-FNKGVNTIIGENGSGKTNLFRA 42 >gi|262403491|ref|ZP_06080049.1| ATP binding protein [Vibrio sp. RC586] gi|262349995|gb|EEY99130.1| ATP binding protein [Vibrio sp. RC586] Length = 418 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 ++IS ++ F E +I+ D +TIV G NG GK++L Sbjct: 1 MYFKKLKISKWQQF-EEIEIDLHDRITIVTGSNGCGKTTLL 40 >gi|226309221|ref|YP_002769181.1| iron-siderophore ABC transporter ATP-binding protein [Rhodococcus erythropolis PR4] gi|226188338|dbj|BAH36442.1| putative iron-siderophore ABC transporter ATP-binding protein [Rhodococcus erythropolis PR4] Length = 274 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 R + +E D T+V G NG GKS+L A+ + + R + + S +T Sbjct: 22 RTIVDELSLEIPDGGFTVVVGPNGCGKSTLLRALGRMLAPRSGRVLLDGNDIR-SYRTK 79 >gi|254196484|ref|ZP_04902908.1| conserved hypothetical protein [Burkholderia pseudomallei S13] gi|169653227|gb|EDS85920.1| conserved hypothetical protein [Burkholderia pseudomallei S13] Length = 598 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L + IS+FR IE D + ++ G N GKSS+ A E + Sbjct: 20 RLHKLTISNFRAIGAKPVTIELDD-IVVLVGPNNAGKSSILRAYEVVM 66 >gi|160903297|ref|YP_001568878.1| SMC domain-containing protein [Petrotoga mobilis SJ95] gi|160360941|gb|ABX32555.1| SMC domain protein [Petrotoga mobilis SJ95] Length = 531 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 LL + I +F F ++F D+ + G++G GKS A+ G + Sbjct: 2 LLSLSIKNFGLFKSAN-VDFNDNFCAITGESGTGKSMFLNALNLFLIGNVPQNLK 55 >gi|325066374|ref|ZP_08125047.1| SMC domain protein [Actinomyces oris K20] Length = 382 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + + FR +++ +T++ G NG GKS+L A+E + Sbjct: 5 LGRLVVEGFRSIR-RLELDLTTDVTVLIGANGSGKSNLVSALELV 48 >gi|320164959|gb|EFW41858.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 734 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L L +++ +F+ F +I + I+ G NG GK+ + AI G+ R Sbjct: 36 LYLSLHQLQLQNFKRFEDIT-LTLTPSPKIIVGANGSGKTQILWAILIFLRGHNAR 90 >gi|315640250|ref|ZP_07895367.1| cobalt ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus italicus DSM 15952] gi|315483912|gb|EFU74391.1| cobalt ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus italicus DSM 15952] Length = 452 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Query: 13 LSKSLTSYYARKLIFKLLDIEI-SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L K + ++ +F L + + + Q + F +T + G+NG GKS+L A+ Sbjct: 229 LGKLTQANASQTTLFTLQQVALHQGTKPLVTPQTVAFKQGITTLTGENGVGKSTLLRAMV 288 Query: 72 WLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQL 109 L + +R K + M +AV + Q Sbjct: 289 QLHPYTGAMFLEDKKLSRRFGKQKLYEQMTLAVQHAEQQF 328 >gi|315165335|gb|EFU09352.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1302] Length = 452 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLIEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|315030487|gb|EFT42419.1| exonuclease SbcC [Enterococcus faecalis TX4000] Length = 1045 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGAGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|314922022|gb|EFS85853.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] Length = 868 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTGTKASSKSR 59 Query: 86 SIKKRS 91 ++ Sbjct: 60 KVRTAQ 65 >gi|307290303|ref|ZP_07570219.1| exonuclease SbcC [Enterococcus faecalis TX0411] gi|306498724|gb|EFM68225.1| exonuclease SbcC [Enterococcus faecalis TX0411] Length = 1045 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGAGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|300924113|ref|ZP_07140106.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1] gi|300419666|gb|EFK02977.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1] Length = 1047 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIE-----F-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + KI+ F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILSLRLKNLNSLKGEWKIDSTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 >gi|282854539|ref|ZP_06263875.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282582400|gb|EFB87781.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|314980699|gb|EFT24793.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090982|gb|EFT62958.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] Length = 868 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + +F+ E +E D + I G+N GK+S+ EA++ L T+ Sbjct: 1 MKLHRIHVENFKAIDERT-LELPDCGVVIATGRNEIGKTSMVEALDLLLDTGTKASSKSR 59 Query: 86 SIKKRS 91 ++ Sbjct: 60 KVRTAQ 65 >gi|257087663|ref|ZP_05582024.1| exonuclease SbcC [Enterococcus faecalis D6] gi|256995693|gb|EEU82995.1| exonuclease SbcC [Enterococcus faecalis D6] gi|315025538|gb|EFT37470.1| exonuclease SbcC [Enterococcus faecalis TX2137] Length = 1045 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGAGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|256853991|ref|ZP_05559356.1| exonuclease SbcC [Enterococcus faecalis T8] gi|256710934|gb|EEU25977.1| exonuclease SbcC [Enterococcus faecalis T8] Length = 1045 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGAGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|190341559|gb|ACE74856.1| RecN [Enterobacter pyrinus] Length = 553 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHSGMTAITGETGAGKSIAIDALGLCLG----NRAEGDIVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 AGASR 61 >gi|218556834|ref|YP_002389748.1| hypothetical protein ECIAI1_4519 [Escherichia coli IAI1] gi|218363603|emb|CAR01260.1| conserved hypothetical protein, putative P-loop containing nucleoside triphosphate hydrolases [Escherichia coli IAI1] Length = 385 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 ++ + I++ +F+ + E Q + + L + G N GKS++ +AI + Sbjct: 2 IMLPIKSIKLKNFKSYKE-QSFDLS-GLNVFCGNNSVGKSTVMQAIGMVL 49 >gi|212703197|ref|ZP_03311325.1| hypothetical protein DESPIG_01239 [Desulfovibrio piger ATCC 29098] gi|212673463|gb|EEB33946.1| hypothetical protein DESPIG_01239 [Desulfovibrio piger ATCC 29098] Length = 1230 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFT-----EIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ +I + T ++ + +F + + + G G GK+++ +AI YG T R Sbjct: 1 MRIQNIRFQNLNSLTGVWEIDLTRPDFVSAGIFAITGPTGAGKTTILDAICLALYGRTPR 60 >gi|330447267|ref|ZP_08310917.1| ssDNA and dsDNA binding, ATP binding [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491458|dbj|GAA05414.1| ssDNA and dsDNA binding, ATP binding [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 360 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR E + A + G NG GK+S+ EAI +L +G + R Sbjct: 1 MALTRLMVHDFRNI-EACDLALATGFNFLVGANGSGKTSVLEAIHYLGHGRSFRSHLTSR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|262198165|ref|YP_003269374.1| hypothetical protein Hoch_4992 [Haliangium ochraceum DSM 14365] gi|262081512|gb|ACY17481.1| hypothetical protein Hoch_4992 [Haliangium ochraceum DSM 14365] Length = 380 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ FR F + ++ I G NG GKS++ A++ LF R Sbjct: 1 MRITAFWAKGFRSF-DDMHLDGLGAFNIFYGPNGVGKSNILAAMKTLFGQLAWRS 54 >gi|146301207|ref|YP_001195798.1| DNA repair protein RecN [Flavobacterium johnsoniae UW101] gi|146155625|gb|ABQ06479.1| DNA repair protein RecN [Flavobacterium johnsoniae UW101] Length = 550 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I ++ E I+F+ +I+ G+ G GKS + AI + + + Sbjct: 2 ITSLSIKNY-ALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEE 60 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 K I+ + KY LK Sbjct: 61 KCVIEAQFEIS------KYNLK 76 >gi|22298666|ref|NP_681913.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus BP-1] gi|22294846|dbj|BAC08675.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus BP-1] Length = 255 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 13/79 (16%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I ++ D+ +S F GF + + F L ++ G NG GK++ + I L Sbjct: 4 ILEIEDLTVS-FEGFNALNHLSFQMQAGELRVIIGPNGAGKTTFLDVITGKVKPTQGRVL 62 Query: 74 FYGYTQRRKHGDSIKKRSI 92 F G+ RR D I + I Sbjct: 63 FKGHNLRRYSEDQIARMGI 81 >gi|332710839|ref|ZP_08430776.1| putative ATPase [Lyngbya majuscula 3L] gi|332350392|gb|EGJ29995.1| putative ATPase [Lyngbya majuscula 3L] Length = 394 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L I+I ++R F E +I+ ++ G NG GKS+L + +G+ + Sbjct: 1 MKILSIKIKNYRVF-ENLEIKNIPAFFVIVGANGTGKSTLFD-----IFGFIHDALKNN- 53 Query: 87 IKKRSIKTPMPMCMAVPRCKYQ 108 +++++ + R K Q Sbjct: 54 -IRQALQVRGGFNEVITRGKEQ 74 >gi|320535591|ref|ZP_08035688.1| DNA replication and repair protein RecF [Treponema phagedenis F0421] gi|320147554|gb|EFW39073.1| DNA replication and repair protein RecF [Treponema phagedenis F0421] Length = 356 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I + +FR + I+ + + G+NG GK++L E++ YG + R + Sbjct: 1 MPFLTISLVNFRNLSNKP-IDLSAPEVFLIGKNGQGKTNLLESLYIASYGNSFRTRTDSE 59 Query: 87 I 87 I Sbjct: 60 I 60 >gi|302871625|ref|YP_003840261.1| ATP-dependent OLD family endonuclease [Caldicellulosiruptor obsidiansis OB47] gi|302574484|gb|ADL42275.1| ATP-dependent OLD family endonuclease [Caldicellulosiruptor obsidiansis OB47] Length = 648 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + I +++ F + +I + + GQN GKS++ +AI+ F Y ++ D Sbjct: 1 MYISKMRIRNYKSFLDSGEIMLDEKIFAFIGQNNTGKSTILDAIKIFFPNYKKQVDRKD 59 >gi|269968208|ref|ZP_06182239.1| hypothetical protein VMC_36690 [Vibrio alginolyticus 40B] gi|269827206|gb|EEZ81509.1| hypothetical protein VMC_36690 [Vibrio alginolyticus 40B] Length = 325 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKHG 84 +L +I ++ + F E++ + A T+ +G NG GK+++ +AI+++ G QR R + Sbjct: 12 RLSNIILAQWYLF-ELETFDVAQAGATLFSGDNGAGKTTIFDAIQFVLMGGDQRITRYNA 70 Query: 85 DSIKKRSIKTPM 96 + + S +T Sbjct: 71 AADGRTSERTAR 82 >gi|251810780|ref|ZP_04825253.1| exonuclease SbcC [Staphylococcus epidermidis BCM-HMP0060] gi|251805708|gb|EES58365.1| exonuclease SbcC [Staphylococcus epidermidis BCM-HMP0060] Length = 1002 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 11/82 (13%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 + +F F + I+F D L +++G+ G GK+ + +AI + YG + + ++ Sbjct: 1 MENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTRKEGDLR 59 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 PM + YQ K Sbjct: 60 SHFADGKSPMSVI-----YQFK 76 >gi|84784034|gb|ABC61982.1| Rad18/SMC6-like protein [Trichomonas vaginalis] Length = 1039 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + + IE H+ + G+NG GKSS+ A+ ++ G+ ++ Sbjct: 18 IRSVRMVNFMKHSNLC-IELKPHVNFITGRNGSGKSSILVALSVGLGCNSRVSGRGNKLE 76 Query: 89 KR 90 + Sbjct: 77 EL 78 >gi|123415598|ref|XP_001304719.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] gi|121886191|gb|EAX91789.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] Length = 1031 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + + IE H+ + G+NG GKSS+ A+ ++ G+ ++ Sbjct: 10 IRSVRMVNFMKHSNLC-IELKPHVNFITGRNGSGKSSILVALSVGLGCNSRVSGRGNKLE 68 Query: 89 KR 90 + Sbjct: 69 EL 70 >gi|116249915|ref|YP_765753.1| recombination protein F [Rhizobium leguminosarum bv. viciae 3841] gi|123262032|sp|Q1MN15|RECF_RHIL3 RecName: Full=DNA replication and repair protein recF gi|115254563|emb|CAK05637.1| putative DNA replication and repair protein [Rhizobium leguminosarum bv. viciae 3841] Length = 374 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + H ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYAAAALALDGRH-AVLTGDNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|89097285|ref|ZP_01170175.1| predicted ATP-dependent endonuclease of the OLD family protein [Bacillus sp. NRRL B-14911] gi|89088108|gb|EAR67219.1| predicted ATP-dependent endonuclease of the OLD family protein [Bacillus sp. NRRL B-14911] Length = 603 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL + I +F+G E+ ++ ++++I+ G N KS++ EA+ +G + + Sbjct: 1 MKLTKLTIRNFKGIKELA-LDV-ENISIIIGPNNCSKSTVLEAL--CKFGSSDTMLEKNL 56 Query: 87 IKKRSIKTP 95 + + P Sbjct: 57 YHRHNTSNP 65 >gi|262190206|ref|ZP_06048482.1| SMC domain protein [Vibrio cholerae CT 5369-93] gi|262033903|gb|EEY52367.1| SMC domain protein [Vibrio cholerae CT 5369-93] Length = 396 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I F+ + Q I+ L + G NG GKS+L E+I + + + + Sbjct: 4 IKRLTIKGFKSIYD-QDIDLGR-LNVFIGTNGAGKSNLLESIA-MLSASIEGGIDYERLS 60 Query: 89 KRSIKTPMP 97 +R + P Sbjct: 61 RRGARLSSP 69 >gi|227498340|ref|ZP_03928490.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903802|gb|EEH89720.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 610 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 F L + ++ G + IEF ++ G + GKS + + +++ +R Sbjct: 4 FYLKKLIVAG--GQHQSSVIEFNRGFNLIIGPSNTGKSFIMDCLDYALGATPSKR 56 >gi|209946180|gb|ACI97321.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|91224631|ref|ZP_01259892.1| predicted ATP-dependent endonuclease of the OLD family protein [Vibrio alginolyticus 12G01] gi|91190519|gb|EAS76787.1| predicted ATP-dependent endonuclease of the OLD family protein [Vibrio alginolyticus 12G01] Length = 608 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 KL + I +FRG I FA D T + G+N GKS++ AI + Sbjct: 1 MKLKKVVIENFRG------ITFAAIDVDDFTTLVGRNNIGKSTILSAIRIAL-NTSHPTL 53 Query: 83 HGDSIKKRSIKTPMPMC 99 K S + C Sbjct: 54 DDWPNKACSEEPMRITC 70 >gi|315655558|ref|ZP_07908457.1| DNA repair protein RecN [Mobiluncus curtisii ATCC 51333] gi|315656529|ref|ZP_07909416.1| DNA repair protein RecN [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315490213|gb|EFU79839.1| DNA repair protein RecN [Mobiluncus curtisii ATCC 51333] gi|315492484|gb|EFU82088.1| DNA repair protein RecN [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 575 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I + G +EF+ T++ G+ G GK+ L +++WL + Sbjct: 2 LESLRIENL-GTISSVALEFSPGFTVITGETGAGKTMLLTSLDWLLGAKVEPAL 54 >gi|304389277|ref|ZP_07371242.1| DNA repair protein RecN [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327395|gb|EFL94628.1| DNA repair protein RecN [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 575 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I + G +EF+ T++ G+ G GK+ L +++WL + Sbjct: 2 LESLRIENL-GTISSVALEFSPGFTVITGETGAGKTMLLTSLDWLLGAKVEPAL 54 >gi|229061693|ref|ZP_04199030.1| ABC transporter, ATP-binding protein [Bacillus cereus AH603] gi|228717606|gb|EEL69265.1| ABC transporter, ATP-binding protein [Bacillus cereus AH603] Length = 209 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L EAI + Sbjct: 2 QSLAFHPNVTFIIGENGTGKSTLLEAIAVALGFNAE 37 >gi|298347016|ref|YP_003719703.1| DNA recombination and repair protein [Mobiluncus curtisii ATCC 43063] gi|298237077|gb|ADI68209.1| DNA recombination and repair protein [Mobiluncus curtisii ATCC 43063] Length = 575 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I + G +EF+ T++ G+ G GK+ L +++WL + Sbjct: 2 LESLRIENL-GTISSVALEFSPGFTVITGETGAGKTMLLTSLDWLLGAKVEPAL 54 >gi|227548576|ref|ZP_03978625.1| ATP-binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079405|gb|EEI17368.1| ATP-binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 1116 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 F+L I++ ++ F + + + ++ G +G GKS+L +A+ + ++ R + Sbjct: 9 FRLSQIQVYNWGTFDNLHTVNVSREGFLITGPSGSGKSTLIDALSTILVPPSKVRFN 65 >gi|209559663|ref|YP_002286135.1| Putative DNA repair and genetic recombination protein [Streptococcus pyogenes NZ131] gi|209540864|gb|ACI61440.1| Putative DNA repair and genetic recombination protein [Streptococcus pyogenes NZ131] Length = 553 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|209524524|ref|ZP_03273072.1| SMC domain protein [Arthrospira maxima CS-328] gi|209494982|gb|EDZ95289.1| SMC domain protein [Arthrospira maxima CS-328] Length = 397 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ I F+ +E + G NG GKS+L EA+ + +S+ Sbjct: 4 IREVTIRGFKSIYSAT-LELGR-VNCFIGANGAGKSNLLEALG-VLGAAANGVVDDESLL 60 Query: 89 KRSIKTPMP 97 +R ++ +P Sbjct: 61 RRGVRAGLP 69 >gi|78059714|ref|YP_366289.1| hypothetical protein Bcep18194_C6595 [Burkholderia sp. 383] gi|77964264|gb|ABB05645.1| hypothetical protein Bcep18194_C6595 [Burkholderia sp. 383] Length = 880 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 +S + + F LT++ G NG GKS + ++ + ++ +K K Sbjct: 88 VSGVNALAAGETLSFGPKLTVIYGPNGAGKSGYARVLKSACFTRSKDIGILGDVKLVKSK 147 Query: 94 TPMP 97 P P Sbjct: 148 QPKP 151 >gi|15675399|ref|NP_269573.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes M1 GAS] gi|71911041|ref|YP_282591.1| DNA repair protein [Streptococcus pyogenes MGAS5005] gi|13622585|gb|AAK34294.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes M1 GAS] gi|71853823|gb|AAZ51846.1| DNA repair protein [Streptococcus pyogenes MGAS5005] Length = 553 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|19746449|ref|NP_607585.1| DNA repair and genetic recombination protein [Streptococcus pyogenes MGAS8232] gi|139473480|ref|YP_001128196.1| DNA repair protein [Streptococcus pyogenes str. Manfredo] gi|19748651|gb|AAL98084.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes MGAS8232] gi|134271727|emb|CAM29960.1| putative DNA repair protein [Streptococcus pyogenes str. Manfredo] Length = 553 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|56707660|ref|YP_169556.1| hypothetical protein FTT_0525 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670131|ref|YP_666688.1| hypothetical protein FTF0525 [Francisella tularensis subsp. tularensis FSC198] gi|134301996|ref|YP_001121965.1| hypothetical protein FTW_1017 [Francisella tularensis subsp. tularensis WY96-3418] gi|187931837|ref|YP_001891822.1| hypothetical protein FTM_1158 [Francisella tularensis subsp. mediasiatica FSC147] gi|224456730|ref|ZP_03665203.1| hypothetical protein FtultM_02802 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370170|ref|ZP_04986176.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874476|ref|ZP_05247186.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604152|emb|CAG45158.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320464|emb|CAL08541.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC198] gi|134049773|gb|ABO46844.1| hypothetical protein FTW_1017 [Francisella tularensis subsp. tularensis WY96-3418] gi|151568414|gb|EDN34068.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|187712746|gb|ACD31043.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254840475|gb|EET18911.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158822|gb|ADA78213.1| hypothetical protein NE061598_02965 [Francisella tularensis subsp. tularensis NE061598] Length = 218 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++I ++ I+ + G NG GKS++ EA+ ++F + K D Sbjct: 1 MKITRLKIKGYKNL--DIDIKHESDIMAFIGLNGSGKSNVLEALSFIFRE-IYKNKQEDI 57 Query: 87 IKKRSIKTPMPM 98 +KK P Sbjct: 58 LKKVCKNIPFEF 69 >gi|21910687|ref|NP_664955.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes MGAS315] gi|28895623|ref|NP_801973.1| DNA repair and genetic recombination protein [Streptococcus pyogenes SSI-1] gi|306827055|ref|ZP_07460353.1| DNA repair protein RecN [Streptococcus pyogenes ATCC 10782] gi|21904890|gb|AAM79758.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes MGAS315] gi|28810872|dbj|BAC63806.1| putative DNA repair and genetic recombination protein [Streptococcus pyogenes SSI-1] gi|304430801|gb|EFM33812.1| DNA repair protein RecN [Streptococcus pyogenes ATCC 10782] Length = 553 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|56808393|ref|ZP_00366145.1| COG0497: ATPase involved in DNA repair [Streptococcus pyogenes M49 591] Length = 553 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F + + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|308050614|ref|YP_003914180.1| DNA replication and repair protein RecN [Ferrimonas balearica DSM 9799] gi|307632804|gb|ADN77106.1| DNA replication and repair protein RecN [Ferrimonas balearica DSM 9799] Length = 556 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + +++F + +++FA +T + G+ G GKS +A+ G + Sbjct: 2 LTQLTVANF-AIVKFLELDFAPGMTTITGETGAGKSIAIDALSLCLGGRGEAGM 54 >gi|294055474|ref|YP_003549132.1| DNA replication and repair protein RecF [Coraliomargarita akajimensis DSM 45221] gi|293614807|gb|ADE54962.1| DNA replication and repair protein RecF [Coraliomargarita akajimensis DSM 45221] Length = 360 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFR--GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + ++ + FR F E ++ + + G NG GKS+L EA+ + + R + Sbjct: 1 MRFKELRVQDFRNVSFAE---LDLSADRNFLLGPNGQGKSNLLEALGLVTALRSFRTQQM 57 Query: 85 DSIKKRS 91 ++ ++ Sbjct: 58 SALPRQG 64 >gi|266619621|ref|ZP_06112556.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288868823|gb|EFD01122.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 1103 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ + + ++ FT+ I +T + G N GK+++ +A+ + G+ Sbjct: 1 MIRMTRVRLVNWHNFTD--SILDIKMITYLIGVNAVGKTTIMDAVRYCLTTNKNFNTAGN 58 Query: 86 SIKKRSIKT 94 +RS +T Sbjct: 59 ---RRSERT 64 >gi|256021047|ref|ZP_05434912.1| putative enzyme with ATPase activity [Shigella sp. D9] gi|332282274|ref|ZP_08394687.1| conserved hypothetical protein [Shigella sp. D9] gi|332104626|gb|EGJ07972.1| conserved hypothetical protein [Shigella sp. D9] Length = 419 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 13/96 (13%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----------- 74 +F+L ++I F G F + + I+ G+NG GK++ + + Sbjct: 1 MFRLSSVKIEGFWG-RLNASCSFNEDVNIIIGRNGTGKTTFMNILHSVLALELESLNENS 59 Query: 75 -YGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQL 109 T + K G K + + + A+P +Y + Sbjct: 60 FDNVTIKIKEGSKTKTIKVVSKFDITKALPTFEYTI 95 >gi|307108067|gb|EFN56308.1| hypothetical protein CHLNCDRAFT_144721 [Chlorella variabilis] Length = 1694 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 12/72 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQ-----------NGYGKSSLSEAIEWLF 74 + +E+ + F E + D L +V GQ NG GK++L A W Sbjct: 546 LEFQAVEVEGYFSFREPVRYRLGDRGLVVVTGQVQGSAEAGLESNGAGKTALMMAPLWAL 605 Query: 75 YGYTQRRKHGDS 86 G R G + Sbjct: 606 TGGVDARAEGSA 617 >gi|254507684|ref|ZP_05119816.1| putative RecF family protein [Vibrio parahaemolyticus 16] gi|219549381|gb|EED26374.1| putative RecF family protein [Vibrio parahaemolyticus 16] Length = 542 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MQLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|209946188|gb|ACI97325.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|171684911|ref|XP_001907397.1| hypothetical protein [Podospora anserina S mat+] gi|170942416|emb|CAP68068.1| unnamed protein product [Podospora anserina S mat+] Length = 1089 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +++ +F ++E + +L +V G NG GKSSL AI Sbjct: 51 IVRVKLRNFVTYSE-AQFSLGPNLNMVIGPNGTGKSSLVCAI 91 >gi|77166197|ref|YP_344722.1| hypothetical protein Noc_2740 [Nitrosococcus oceani ATCC 19707] gi|76884511|gb|ABA59192.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] Length = 150 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 25/40 (62%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++F D+ ++ G+N GKS++ EA+E F T + + GD Sbjct: 1 MKFDDNFNVIIGRNDVGKSTILEALEIFFNNETVKMEIGD 40 >gi|310817573|ref|YP_003949931.1| DNA replication and repair protein [Stigmatella aurantiaca DW4/3-1] gi|309390645|gb|ADO68104.1| DNA replication and repair protein [Stigmatella aurantiaca DW4/3-1] Length = 152 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGYTQRRKHG- 84 L + + +F+ + ++ A+ LT++ G N GKS+L EA++ WL G RR Sbjct: 2 LAALGVDNFKSYRS-ARLPLAE-LTVLIGANASGKSNLLEALQMLSWLARG---RRLSEI 56 Query: 85 -DSIKKRSIKTPMPMCMAV 102 ++K R + P+ V Sbjct: 57 LYALKDRQLDVRGPVNRLV 75 >gi|115465843|ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1| putative SMC5 protein [Oryza sativa Japonica Group] gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1065 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F + + L +V G NG GKSSL AI S+ Sbjct: 40 IVEIELCNFMTY-DHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSV 97 >gi|328470643|gb|EGF41554.1| ATP-dependent endonuclease [Vibrio parahaemolyticus 10329] Length = 544 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ Sbjct: 1 MRLERIEISGFRGI-KRLSLSF-DELTTLIGENTWGKSSLLDALSIAL 46 >gi|327534274|gb|AEA93108.1| hypothetical protein OG1RF_10421 [Enterococcus faecalis OG1RF] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|323479867|gb|ADX79306.1| hypothetical protein EF62_1055 [Enterococcus faecalis 62] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315173981|gb|EFU17998.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315170750|gb|EFU14767.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315164539|gb|EFU08556.1| conserved hypothetical protein [Enterococcus faecalis TX1302] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315149421|gb|EFT93437.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315147000|gb|EFT91016.1| conserved hypothetical protein [Enterococcus faecalis TX4244] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315031410|gb|EFT43342.1| conserved hypothetical protein [Enterococcus faecalis TX0017] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|315025713|gb|EFT37645.1| conserved hypothetical protein [Enterococcus faecalis TX2137] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|312900278|ref|ZP_07759590.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|311292639|gb|EFQ71195.1| conserved hypothetical protein [Enterococcus faecalis TX0470] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|312953068|ref|ZP_07771918.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310628977|gb|EFQ12260.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315154020|gb|EFT98036.1| conserved hypothetical protein [Enterococcus faecalis TX0031] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|307277030|ref|ZP_07558136.1| hypothetical protein HMPREF9521_02637 [Enterococcus faecalis TX2134] gi|306506274|gb|EFM75438.1| hypothetical protein HMPREF9521_02637 [Enterococcus faecalis TX2134] gi|315159699|gb|EFU03716.1| conserved hypothetical protein [Enterococcus faecalis TX0312] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|307289623|ref|ZP_07569567.1| hypothetical protein HMPREF9505_02984 [Enterococcus faecalis TX0109] gi|306499437|gb|EFM68810.1| hypothetical protein HMPREF9505_02984 [Enterococcus faecalis TX0109] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|295114097|emb|CBL32734.1| Uncharacterized conserved protein [Enterococcus sp. 7L76] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|257415253|ref|ZP_05592247.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257157081|gb|EEU87041.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|257086044|ref|ZP_05580405.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256994074|gb|EEU81376.1| conserved hypothetical protein [Enterococcus faecalis D6] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|257083612|ref|ZP_05577973.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256991642|gb|EEU78944.1| conserved hypothetical protein [Enterococcus faecalis Fly1] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|257080933|ref|ZP_05575294.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988963|gb|EEU76265.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|256964478|ref|ZP_05568649.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|307272497|ref|ZP_07553750.1| hypothetical protein HMPREF9514_01261 [Enterococcus faecalis TX0855] gi|256954974|gb|EEU71606.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|306510782|gb|EFM79799.1| hypothetical protein HMPREF9514_01261 [Enterococcus faecalis TX0855] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|256959820|ref|ZP_05563991.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|257418298|ref|ZP_05595292.1| predicted protein [Enterococcus faecalis T11] gi|293385008|ref|ZP_06630842.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293389278|ref|ZP_06633740.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312905997|ref|ZP_07765010.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909343|ref|ZP_07768199.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256950316|gb|EEU66948.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|257160126|gb|EEU90086.1| predicted protein [Enterococcus faecalis T11] gi|291077686|gb|EFE15050.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081442|gb|EFE18405.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310627992|gb|EFQ11275.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311290367|gb|EFQ68923.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|256761454|ref|ZP_05502034.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256682705|gb|EEU22400.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|256617571|ref|ZP_05474417.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256597098|gb|EEU16274.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|255973767|ref|ZP_05424353.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|307284554|ref|ZP_07564716.1| hypothetical protein HMPREF9515_02489 [Enterococcus faecalis TX0860] gi|255966639|gb|EET97261.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|306503231|gb|EFM72485.1| hypothetical protein HMPREF9515_02489 [Enterococcus faecalis TX0860] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|255971143|ref|ZP_05421729.1| predicted protein [Enterococcus faecalis T1] gi|255962161|gb|EET94637.1| predicted protein [Enterococcus faecalis T1] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|300861940|ref|ZP_07108020.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|300848465|gb|EFK76222.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|315144512|gb|EFT88528.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|238759664|ref|ZP_04620824.1| DNA repair protein recN [Yersinia aldovae ATCC 35236] gi|238702092|gb|EEP94649.1| DNA repair protein recN [Yersinia aldovae ATCC 35236] Length = 553 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + IS+F E++ I+F +T + G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMTAITGETGAGKSIAIDALGLCLGSRS 50 >gi|229546512|ref|ZP_04435237.1| conserved hypothetical protein [Enterococcus faecalis TX1322] gi|256854457|ref|ZP_05559821.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|257089112|ref|ZP_05583473.1| predicted protein [Enterococcus faecalis CH188] gi|307289955|ref|ZP_07569884.1| hypothetical protein HMPREF9509_00268 [Enterococcus faecalis TX0411] gi|312904297|ref|ZP_07763459.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|229308412|gb|EEN74399.1| conserved hypothetical protein [Enterococcus faecalis TX1322] gi|256710017|gb|EEU25061.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256997924|gb|EEU84444.1| predicted protein [Enterococcus faecalis CH188] gi|306499021|gb|EFM68510.1| hypothetical protein HMPREF9509_00268 [Enterococcus faecalis TX0411] gi|310632393|gb|EFQ15676.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|315030578|gb|EFT42510.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315161999|gb|EFU06016.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315578738|gb|EFU90929.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|229548630|ref|ZP_04437355.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] gi|256957445|ref|ZP_05561616.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|257420946|ref|ZP_05597936.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|307269718|ref|ZP_07551048.1| hypothetical protein HMPREF9498_01845 [Enterococcus faecalis TX4248] gi|229306261|gb|EEN72257.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] gi|256947941|gb|EEU64573.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|257162770|gb|EEU92730.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|306513828|gb|EFM82430.1| hypothetical protein HMPREF9498_01845 [Enterococcus faecalis TX4248] gi|315034489|gb|EFT46421.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315156663|gb|EFU00680.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|227517650|ref|ZP_03947699.1| conserved hypothetical protein [Enterococcus faecalis TX0104] gi|227074907|gb|EEI12870.1| conserved hypothetical protein [Enterococcus faecalis TX0104] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|255086365|ref|XP_002509149.1| predicted protein [Micromonas sp. RCC299] gi|226524427|gb|ACO70407.1| predicted protein [Micromonas sp. RCC299] Length = 1525 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 10/68 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQN---------GYGKSSLSEAIEWLFYG 76 + +E+ + FT+ D + V G N G GK++L A W G Sbjct: 461 LSMHGVEVEGYGAFTDAVAYPLRDRGVCAVVGDNRDDGCSDSNGAGKTTLVMAAMWALTG 520 Query: 77 YTQRRKHG 84 + R G Sbjct: 521 NSDLRVEG 528 >gi|209946156|gb|ACI97309.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|308799805|ref|XP_003074683.1| structural maintenance of chromosomes (ISS) [Ostreococcus tauri] gi|116000854|emb|CAL50534.1| structural maintenance of chromosomes (ISS) [Ostreococcus tauri] Length = 1075 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + + +F ++ E L +V G NG GKS+ A+ G T+ SI+ Sbjct: 35 VMRVRMKNFMTHGDVT-FEPGPRLNVVVGPNGVGKSAFVCAVCVGLGGSTKLLGRAGSIQ 93 Query: 89 K 89 Sbjct: 94 D 94 >gi|29375280|ref|NP_814433.1| hypothetical protein EF0683 [Enterococcus faecalis V583] gi|227554798|ref|ZP_03984845.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|257077558|ref|ZP_05571919.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294780467|ref|ZP_06745832.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|29342740|gb|AAO80504.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227176097|gb|EEI57069.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|256985588|gb|EEU72890.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|294452466|gb|EFG20903.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|315166860|gb|EFU10877.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315575312|gb|EFU87503.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315581479|gb|EFU93670.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 903 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|28900709|ref|NP_800364.1| hypothetical protein VPA0854 [Vibrio parahaemolyticus RIMD 2210633] gi|260362604|ref|ZP_05775511.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus K5030] gi|260877644|ref|ZP_05889999.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus AN-5034] gi|28809089|dbj|BAC62197.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308090660|gb|EFO40355.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus AN-5034] gi|308112792|gb|EFO50332.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus K5030] Length = 544 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ Sbjct: 1 MRLERIEISGFRGI-KRLSLSF-DELTTLIGENTWGKSSLLDALSIAL 46 >gi|118578978|ref|YP_900228.1| SMC domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501688|gb|ABK98170.1| SMC domain protein [Pelobacter propionicus DSM 2379] Length = 391 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++I F+ + ++ + G NG GKS++ EAI + + R +S++ Sbjct: 2 IRTVKIEGFKSIPSMM-LDLGR-VNCFIGANGVGKSNILEAIG-VLGAAAKGRIDDESLE 58 Query: 89 KRSIKTPMP 97 R ++ +P Sbjct: 59 YRGVRPGLP 67 >gi|310658343|ref|YP_003936064.1| atpas [Clostridium sticklandii DSM 519] gi|308825121|emb|CBH21159.1| ATPas [Clostridium sticklandii] Length = 341 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE+++F F ++ IEF D + I G+N GK+ + + L Y + DS Sbjct: 1 MSIKKIELTNFTVFEDLN-IEFCDGINIFIGENATGKTHIMK----LIYSACKATNPKDS 55 Query: 87 IKKRSIKTPMPMCMAVPR 104 ++ + T P + R Sbjct: 56 FSQKIVNTFKPEDYKISR 73 >gi|307213363|gb|EFN88815.1| Structural maintenance of chromosomes protein 1A [Harpegnathos saltator] Length = 2587 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Query: 47 EFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 F +T+V G NG GKS+L +AI ++ Sbjct: 3 PFHPFMTVV-GPNGSGKSNLVDAICFVLGE 31 >gi|218261320|ref|ZP_03476188.1| hypothetical protein PRABACTJOHN_01854 [Parabacteroides johnsonii DSM 18315] gi|218224101|gb|EEC96751.1| hypothetical protein PRABACTJOHN_01854 [Parabacteroides johnsonii DSM 18315] Length = 367 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +++ + + + F+ + G NG GK++L +A+ +L + + + Sbjct: 3 LKKLSILNYKNILQAE-VSFSPDINCFFGNNGMGKTNLLDAVHYLSFCKSHINTPDSQLI 61 Query: 89 KRSIK 93 Sbjct: 62 NNGQD 66 >gi|213648786|ref|ZP_03378839.1| recombination protein F [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 63 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I FR E + + + G NG GK+S+ EAI Sbjct: 1 MSLSRLLIKDFRNI-ENADLALSPGFNFLVGANGSGKTSVLEAI 43 >gi|149203168|ref|ZP_01880139.1| hypothetical protein RTM1035_20536 [Roseovarius sp. TM1035] gi|149143714|gb|EDM31750.1| hypothetical protein RTM1035_20536 [Roseovarius sp. TM1035] Length = 876 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFTEIQKI--EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 KL IE+++ R F + + D +T+++ N +GKS+ +A+ LF+ R Sbjct: 1 MKLRVIEVTNVRRFAGQRARLGQIGDGITVLSQPNEFGKSTFFDALHALFFERHNSR 57 >gi|158320636|ref|YP_001513143.1| DNA repair protein RecN [Alkaliphilus oremlandii OhILAs] gi|158140835|gb|ABW19147.1| DNA repair protein RecN [Alkaliphilus oremlandii OhILAs] Length = 570 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 LL++EI F + I F + L I++G+ G GKS + +A+ R Sbjct: 2 LLELEIKDF-ALIDQLNISFKEGLNILSGETGAGKSIIIDAVNMAIGERADRS 53 >gi|332529302|ref|ZP_08405264.1| ABC transporter ATPase [Hylemonella gracilis ATCC 19624] gi|332041219|gb|EGI77583.1| ABC transporter ATPase [Hylemonella gracilis ATCC 19624] Length = 284 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + E LT++ G NG GK++L +A+ L G+ + ++ + Sbjct: 38 RFEVKPGLTVILGPNGAGKTTLLKALMGLIPRQGLALLDGEELPDKTHE 86 >gi|313889113|ref|ZP_07822769.1| ABC transporter, ATP-binding protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844853|gb|EFR32258.1| ABC transporter, ATP-binding protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 465 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 30 LDIEISHFRGFTEIQKI-----EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I HF+ + I F + + GQNG GKS+ + + G + G Sbjct: 272 KSITCLHFKKTYDKNTIFDFSVSFNTGINFIIGQNGVGKSTFINLLMGIIKGKGEVFYKG 331 Query: 85 DSIKKR 90 + +KKR Sbjct: 332 EKLKKR 337 >gi|310826457|ref|YP_003958814.1| hypothetical protein ELI_0837 [Eubacterium limosum KIST612] gi|308738191|gb|ADO35851.1| hypothetical protein ELI_0837 [Eubacterium limosum KIST612] Length = 799 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG----YTQRRK 82 K+ + ++ F F + IE D +V G+N GKS++ IE + +G Y ++R Sbjct: 1 MKIKTLILTSFGKFKDRV-IEVDDGFNLVYGENEAGKSTVQHFIEGMLFGFYKPYRKKRT 59 Query: 83 HGDSIKK 89 + + ++ Sbjct: 60 YSEDFER 66 >gi|294649641|ref|ZP_06727055.1| ATP-dependent dsDNA exonuclease [Acinetobacter haemolyticus ATCC 19194] gi|292824457|gb|EFF83246.1| ATP-dependent dsDNA exonuclease [Acinetobacter haemolyticus ATCC 19194] Length = 1203 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRLKNLASLAGEHFIDFESEPLAHAGLIAIIGKTGAGKSTILDAMCLALFNKIPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|226952377|ref|ZP_03822841.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter sp. ATCC 27244] gi|226836829|gb|EEH69212.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter sp. ATCC 27244] Length = 1203 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRLKNLASLAGEHFIDFESEPLAHAGLIAIIGKTGAGKSTILDAMCLALFNKIPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|209946192|gb|ACI97327.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946190|gb|ACI97326.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946182|gb|ACI97322.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946174|gb|ACI97318.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946158|gb|ACI97310.1| RAD50 [Drosophila simulans] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946154|gb|ACI97308.1| RAD50 [Drosophila simulans] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|171911302|ref|ZP_02926772.1| ATP-dependent endonuclease of the OLD family-like protein [Verrucomicrobium spinosum DSM 4136] Length = 665 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKH 83 +L IE+ +FR I+ TI+ G N GK+S+ +A+ + G R Sbjct: 1 MRLETIEVRNFRLLR-RLSIDLTKEKTTTILVGPNNSGKTSVMDALRLFAGVGSDALRIT 59 Query: 84 GDSIKKRSIKTPMPMCMAVPRCK 106 + + + + + R K Sbjct: 60 FHDLSQLRHRNLRWIETKLSRSK 82 >gi|114764477|ref|ZP_01443702.1| molybdate ABC transporter, ATP-binding protein [Pelagibaca bermudensis HTCC2601] gi|114543044|gb|EAU46063.1| molybdate ABC transporter, ATP-binding protein [Roseovarius sp. HTCC2601] Length = 366 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 30 LDIEISH-FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ISH F GF E LT++ G++G GK+++ A+ L R GD + Sbjct: 3 LQVAISHCFGGFQLDIAFEAPPGLTVLFGRSGSGKTTIVNAVAGLLRPDAGRIALGDQVL 62 Query: 89 KRSIK 93 S + Sbjct: 63 FDSAR 67 >gi|50084124|ref|YP_045634.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter sp. ADP1] gi|49530100|emb|CAG67812.1| ATP-dependent dsDNA exonuclease (Suppression of recBC) [Acinetobacter sp. ADP1] Length = 1198 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MKILSIRLKNLASLAGEHFIDFESEPLASAGLIAIIGKTGAGKSTILDAMCLALFNKIPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|312902591|ref|ZP_07761797.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0635] gi|310634261|gb|EFQ17544.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0635] gi|315162068|gb|EFU06085.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0645] gi|315579599|gb|EFU91790.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0630] Length = 452 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|293393082|ref|ZP_06637397.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291424228|gb|EFE97442.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 548 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Query: 27 FKLLDIEI-SHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 K+ + I S F+ E ++F +T++ G+NG GKS++ EA+ Sbjct: 1 MKVDKLHIRSRFKNL-ENVTVDFDQDHLMTVIVGRNGSGKSNVLEAL 46 >gi|312195829|ref|YP_004015890.1| exonuclease [Frankia sp. EuI1c] gi|311227165|gb|ADP80020.1| putative exonuclease [Frankia sp. EuI1c] Length = 1068 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +E+ F F +++ L ++ G+ G GK++L +A+ + YG T Sbjct: 1 MRPHRLELVAFGAFPGEVELDLDRLGAGGLVLLCGETGGGKTTLLDAVGFALYG-TVPGL 59 Query: 83 HG 84 G Sbjct: 60 RG 61 >gi|190341563|gb|ACE74858.1| RecN [Enterobacter turicensis] Length = 553 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS+F E++ ++F +T + G+ G GKS +A+ G Sbjct: 2 LAQLTISNFAIVRELE-VDFHAGMTAITGETGAGKSIAIDALGLCLGG 48 >gi|222632791|gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japonica Group] Length = 1103 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F + + L +V G NG GKSSL AI S+ Sbjct: 40 IVEIELCNFMTY-DHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSV 97 >gi|209946198|gb|ACI97330.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946196|gb|ACI97329.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946186|gb|ACI97324.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946166|gb|ACI97314.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946160|gb|ACI97311.1| RAD50 [Drosophila simulans] Length = 633 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|218782803|ref|YP_002434121.1| hypothetical protein Dalk_4981 [Desulfatibacillum alkenivorans AK-01] gi|218764187|gb|ACL06653.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 375 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + ++ I +FR F IE + ++ G N GKSSL EAI Sbjct: 5 IENLHIKNFRAFR-NISIEGLGRVNLITGMNNTGKSSLIEAIR 46 >gi|163744568|ref|ZP_02151928.1| ABC transporter related protein [Oceanibulbus indolifex HEL-45] gi|161381386|gb|EDQ05795.1| ABC transporter related protein [Oceanibulbus indolifex HEL-45] Length = 271 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI 70 + K+ D+ +S F G +Q + F +T V G NG GK+SL AI Sbjct: 19 LLKIEDLHLS-FGGIKALQGVNFEAGAGEITGVIGPNGAGKTSLFNAI 65 >gi|170738370|ref|YP_001767025.1| DNA replication and repair protein RecF [Methylobacterium sp. 4-46] gi|168192644|gb|ACA14591.1| DNA replication and repair protein RecF [Methylobacterium sp. 4-46] Length = 382 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F++ + FR + + + G+NG GK+++ EA+ G RR + Sbjct: 7 FRVTRLIARDFRNHASLD-LGVGRPFVALVGENGAGKTNILEALSLFAPGRGLRRADFAA 65 Query: 87 IKKRS 91 + + Sbjct: 66 MAREG 70 >gi|157962128|ref|YP_001502162.1| SMC domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847128|gb|ABV87627.1| SMC domain protein [Shewanella pealeana ATCC 700345] Length = 676 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 11/62 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLT-----------IVNGQNGYGKSSLSEAIEWLFYGY 77 + + I++FR F + +I+ +T + G NG GK+S+ A+ YG Sbjct: 3 IKSLVINNFRVFRGVHEIDLEPRVTRKHQTAASPIVLFGGLNGAGKTSILSAVRVALYGR 62 Query: 78 TQ 79 Sbjct: 63 AA 64 >gi|49481921|gb|AAT66672.1| DNA repair and genetic recombination protein [Geobacillus subterraneus] Length = 573 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGXAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|332975044|gb|EGK11950.1| hypothetical protein HMPREF0476_0190 [Kingella kingae ATCC 23330] Length = 686 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I++ +F+ + + + F +L ++ +NG+GK++L EAI Y Sbjct: 1 MWISKIKLHNFKSYADAE-FTFPEPQNGKNLVLIGAENGHGKTTLLEAIYLGLY 53 >gi|323388484|gb|ADX60531.1| RecN [Geobacillus sp. NTU 03] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|297529444|ref|YP_003670719.1| DNA repair protein RecN [Geobacillus sp. C56-T3] gi|297252696|gb|ADI26142.1| DNA repair protein RecN [Geobacillus sp. C56-T3] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|323342011|ref|ZP_08082244.1| DNA repair protein RecN [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464436|gb|EFY09629.1| DNA repair protein RecN [Erysipelothrix rhusiopathiae ATCC 19414] Length = 551 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F ++F+D + G+ G GKS L +A+ ++ + G + K Sbjct: 2 LTHLTIDNF-VLIHHISVDFSDRFNVFTGETGAGKSLLVDALNFVSGQRSSASVVGKNGK 60 Query: 89 KRSIKTPMPMCMAV 102 ++ + A+ Sbjct: 61 SARVEVAFDLEKAI 74 >gi|261417752|ref|YP_003251434.1| DNA repair protein RecN [Geobacillus sp. Y412MC61] gi|319767436|ref|YP_004132937.1| DNA repair protein RecN [Geobacillus sp. Y412MC52] gi|261374209|gb|ACX76952.1| DNA repair protein RecN [Geobacillus sp. Y412MC61] gi|317112302|gb|ADU94794.1| DNA repair protein RecN [Geobacillus sp. Y412MC52] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|169831193|ref|YP_001717175.1| DNA repair protein RecN [Candidatus Desulforudis audaxviator MP104C] gi|169638037|gb|ACA59543.1| DNA repair protein RecN [Candidatus Desulforudis audaxviator MP104C] Length = 572 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + ++EF L ++ G+ G GKS L +A+E + RR D ++ Sbjct: 2 IERLVVRNF-VLIDHLEVEFGPGLNVLTGETGTGKSLLIDALEVVLG----RRASPDYVR 56 >gi|2369708|emb|CAA70738.1| RecN protein [Geobacillus stearothermophilus] Length = 143 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481899|gb|AAT66661.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A90] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481923|gb|AAT66673.1| DNA repair and genetic recombination protein [Geobacillus subterraneus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481865|gb|AAT66644.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481961|gb|AAT66692.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A86] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481877|gb|AAT66650.1| DNA repair and genetic recombination protein [Geobacillus thermocatenulatus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481925|gb|AAT66674.1| DNA repair and genetic recombination protein [Geobacillus uzenensis] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481871|gb|AAT66647.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481901|gb|AAT66662.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A93] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481861|gb|AAT66642.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481943|gb|AAT66683.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A65] gi|49481955|gb|AAT66689.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A74] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481919|gb|AAT66671.1| DNA repair and genetic recombination protein [Geobacillus subterraneus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481951|gb|AAT66687.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A71] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481891|gb|AAT66657.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481957|gb|AAT66690.1| DNA repair and genetic recombination protein [Geobacillus kaue] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481867|gb|AAT66645.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|138895960|ref|YP_001126413.1| DNA repair and genetic recombination [Geobacillus thermodenitrificans NG80-2] gi|196248851|ref|ZP_03147551.1| DNA repair protein RecN [Geobacillus sp. G11MC16] gi|49481927|gb|AAT66675.1| DNA repair and genetic recombination protein [Geobacillus thermodenitrificans] gi|49481929|gb|AAT66676.1| DNA repair and genetic recombination protein [Geobacillus thermodenitrificans] gi|49481931|gb|AAT66677.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A21] gi|49481933|gb|AAT66678.1| DNA repair and genetic recombination protein [Geobacillus thermodenitrificans] gi|49481935|gb|AAT66679.1| DNA repair and genetic recombination protein [Geobacillus thermodenitrificans] gi|49481937|gb|AAT66680.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A45] gi|49481939|gb|AAT66681.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A5] gi|49481941|gb|AAT66682.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A54] gi|49481945|gb|AAT66684.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A66] gi|49481947|gb|AAT66685.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A67] gi|49481949|gb|AAT66686.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A69] gi|49481953|gb|AAT66688.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A73] gi|49481965|gb|AAT66694.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A91] gi|82395828|gb|ABB72478.1| DNA repair protein [Geobacillus thermodenitrificans NG80-2] gi|134267473|gb|ABO67668.1| DNA repair and genetic recombination [Geobacillus thermodenitrificans NG80-2] gi|196211727|gb|EDY06486.1| DNA repair protein RecN [Geobacillus sp. G11MC16] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481873|gb|AAT66648.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481883|gb|AAT66653.1| DNA repair and genetic recombination protein [Bacillus caldovelox] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481881|gb|AAT66652.1| DNA repair and genetic recombination protein [Bacillus caldotenax] gi|49481887|gb|AAT66655.1| DNA repair and genetic recombination protein [Geobacillus vulcani] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481889|gb|AAT66656.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|49481895|gb|AAT66659.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A88] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|38146942|gb|AAR11857.1| DNA repair and genetic recombination [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|56420924|ref|YP_148242.1| DNA repair protein [Geobacillus kaustophilus HTA426] gi|47076824|dbj|BAD18364.1| DNA repair protein [Geobacillus kaustophilus] gi|49481875|gb|AAT66649.1| DNA repair and genetic recombination protein [Geobacillus kaustophilus] gi|49481885|gb|AAT66654.1| DNA repair and genetic recombination protein [Geobacillus thermoleovorans] gi|49481893|gb|AAT66658.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A60] gi|56380766|dbj|BAD76674.1| DNA repair protein (recombination protein N) [Geobacillus kaustophilus HTA426] gi|312985018|gb|ADR30683.1| RecN [Geobacillus kaustophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|47076774|dbj|BAD18317.1| DNA repair protein [Geobacillus stearothermophilus] gi|49481869|gb|AAT66646.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|323127691|gb|ADX24988.1| putative DNA repair and genetic recombination protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 553 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 RGANKAEIE 65 >gi|282864476|ref|ZP_06273532.1| ABC transporter related protein [Streptomyces sp. ACTE] gi|282560963|gb|EFB66509.1| ABC transporter related protein [Streptomyces sp. ACTE] Length = 267 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDSIKKRSIKTP 95 R E +E D+ T++ G N GKS+L A+ + + G SI + K Sbjct: 16 RTIAENLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPESGEVLLDGQSIHRLPAKKV 75 Query: 96 MPMCMAVPR 104 M +P+ Sbjct: 76 ARMLGLLPQ 84 >gi|210610867|ref|ZP_03288620.1| hypothetical protein CLONEX_00810 [Clostridium nexile DSM 1787] gi|210152262|gb|EEA83269.1| hypothetical protein CLONEX_00810 [Clostridium nexile DSM 1787] Length = 365 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I L +E +F F E I F L ++ G+NG GK+ + + + Y Q KH Sbjct: 27 IMPLTKMEAENFTVF-EKISIPFCRGLNVLVGENGVGKTHVMK----IAYAACQASKHDV 81 Query: 86 SIKKRSIKTPMPMCMAVPR 104 S ++S+ P ++ R Sbjct: 82 SFSQKSVMLFRPDQSSIGR 100 >gi|209946206|gb|ACI97334.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946170|gb|ACI97316.1| RAD50 [Drosophila melanogaster] gi|209946184|gb|ACI97323.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946164|gb|ACI97313.1| RAD50 [Drosophila simulans] Length = 633 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|254464770|ref|ZP_05078181.1| hypothetical protein RBY4I_1372 [Rhodobacterales bacterium Y4I] gi|206685678|gb|EDZ46160.1| hypothetical protein RBY4I_1372 [Rhodobacterales bacterium Y4I] Length = 744 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL IE+ +FR +++ +D T++ G N GK+S +A+ Sbjct: 1 MKLRRIEVFNFRKLR-RARLDMSDKQTLLVGANNSGKTSAMKALR 44 >gi|159041648|ref|YP_001540900.1| SMC domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920483|gb|ABW01910.1| SMC domain protein [Caldivirga maquilingensis IC-167] Length = 804 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 IE+ + R + + + ++G NG GK+++ ++I YG D +K+R Sbjct: 7 IEVENIRSIR-KASVRLSSGVNFIHGLNGAGKTTILDSIALALYGT-------DWLKRRR 58 Query: 92 IK 93 IK Sbjct: 59 IK 60 >gi|119384180|ref|YP_915236.1| hypothetical protein Pden_1439 [Paracoccus denitrificans PD1222] gi|119373947|gb|ABL69540.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length = 744 Score = 40.4 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL IE+ +FR +++ +D T++ G N GK+S +A+ Sbjct: 1 MKLRRIEVFNFRKLR-RARLDMSDKQTLLVGANNSGKTSAMKALR 44 >gi|328951061|ref|YP_004368396.1| DNA repair protein RecN [Marinithermus hydrothermalis DSM 14884] gi|328451385|gb|AEB12286.1| DNA repair protein RecN [Marinithermus hydrothermalis DSM 14884] Length = 527 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +E+ + E +EF LT++ G+ G GKS L +A+ L Sbjct: 2 LERLEVKNL-AVLEAATLEFGPGLTVLTGETGAGKSILVDALSLLLG 47 >gi|260460905|ref|ZP_05809155.1| AAA ATPase [Mesorhizobium opportunistum WSM2075] gi|259033482|gb|EEW34743.1| AAA ATPase [Mesorhizobium opportunistum WSM2075] Length = 260 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 FRG +EF +TI+ G+NG GKS+L EAI GY + Sbjct: 38 FRGRAFE--LEFTTPITIIVGENGTGKSTLLEAIG-ALAGYDEAGGGKGY 84 >gi|256851324|ref|ZP_05556713.1| DNA repair protein RecN [Lactobacillus jensenii 27-2-CHN] gi|260660748|ref|ZP_05861663.1| DNA repair protein RecN [Lactobacillus jensenii 115-3-CHN] gi|282933231|ref|ZP_06338618.1| DNA repair protein RecN [Lactobacillus jensenii 208-1] gi|297206194|ref|ZP_06923589.1| DNA repair protein RecN [Lactobacillus jensenii JV-V16] gi|256616386|gb|EEU21574.1| DNA repair protein RecN [Lactobacillus jensenii 27-2-CHN] gi|260548470|gb|EEX24445.1| DNA repair protein RecN [Lactobacillus jensenii 115-3-CHN] gi|281302735|gb|EFA94950.1| DNA repair protein RecN [Lactobacillus jensenii 208-1] gi|297149320|gb|EFH29618.1| DNA repair protein RecN [Lactobacillus jensenii JV-V16] Length = 561 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L++++I +F + KI+F ++T++ G+ G GKS L +A+ L Sbjct: 2 LVELDIQNF-AIIKNLKIKFKKNMTVLIGETGAGKSILIDALSLLLG 47 >gi|238854799|ref|ZP_04645129.1| DNA repair protein RecN [Lactobacillus jensenii 269-3] gi|260664030|ref|ZP_05864883.1| DNA repair protein RecN [Lactobacillus jensenii SJ-7A-US] gi|282933877|ref|ZP_06339225.1| DNA repair protein RecN [Lactobacillus jensenii 208-1] gi|313472308|ref|ZP_07812800.1| DNA repair protein RecN [Lactobacillus jensenii 1153] gi|238832589|gb|EEQ24896.1| DNA repair protein RecN [Lactobacillus jensenii 269-3] gi|239529841|gb|EEQ68842.1| DNA repair protein RecN [Lactobacillus jensenii 1153] gi|260561916|gb|EEX27885.1| DNA repair protein RecN [Lactobacillus jensenii SJ-7A-US] gi|281301966|gb|EFA94220.1| DNA repair protein RecN [Lactobacillus jensenii 208-1] Length = 561 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L++++I +F + KI+F ++T++ G+ G GKS L +A+ L Sbjct: 2 LVELDIQNF-AIIKNLKIKFKKNMTVLIGETGAGKSILIDALSLLLG 47 >gi|146319305|ref|YP_001199017.1| ATPase involved in DNA repair [Streptococcus suis 05ZYH33] gi|146321508|ref|YP_001201219.1| DNA repair ATPase [Streptococcus suis 98HAH33] gi|145690111|gb|ABP90617.1| ATPase involved in DNA repair [Streptococcus suis 05ZYH33] gi|145692314|gb|ABP92819.1| ATPase involved in DNA repair [Streptococcus suis 98HAH33] gi|292558937|gb|ADE31938.1| DNA repair protein RecN [Streptococcus suis GZ1] Length = 556 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ LL++ I +F E + F + +TI++G+ G GKS + +A+ + R Sbjct: 1 MVAMLLEVSIKNF-AIIEQVSLNFENGMTILSGETGAGKSIIIDAMNLMLG----ARATT 55 Query: 85 DSIKKRSIKTPMP 97 D I+ + K + Sbjct: 56 DVIRHGAAKAEIE 68 >gi|189423507|ref|YP_001950684.1| SMC domain protein [Geobacter lovleyi SZ] gi|189419766|gb|ACD94164.1| SMC domain protein [Geobacter lovleyi SZ] Length = 242 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I ++F +T G+NG GKS+L E+I ++ Sbjct: 31 RNINTLQFHSGVTFFVGENGAGKSTLIESIALAMGFSSEGGTR 73 >gi|39996523|ref|NP_952474.1| nuclease SbcCD subunit C [Geobacter sulfurreducens PCA] gi|39983404|gb|AAR34797.1| nuclease SbcCD, C subunit, putative [Geobacter sulfurreducens PCA] gi|298505539|gb|ADI84262.1| DNA repair exonuclease SbcCD, C subunit, putative [Geobacter sulfurreducens KN400] Length = 724 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +E+ F F F + +V G+N GKS+L AI +G+ + R Sbjct: 1 MLWISRVELPAFGRFRG-ASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDR 57 >gi|88704208|ref|ZP_01101922.1| DNA repair protein RecN [Congregibacter litoralis KT71] gi|88701259|gb|EAQ98364.1| DNA repair protein RecN [Congregibacter litoralis KT71] Length = 551 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I IS F E +++F D LT+V G+ G GKS + +A+ Sbjct: 2 LSQITISQF-TVVEYLEVDFRDGLTVVTGETGAGKSIMLDALGLCLG 47 >gi|315151802|gb|EFT95818.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0012] Length = 452 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|315148729|gb|EFT92745.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX4244] Length = 452 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|312900128|ref|ZP_07759444.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0470] gi|311292763|gb|EFQ71319.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0470] Length = 452 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|257091005|ref|ZP_05585366.1| ABC cobalt transporter ATP-binding protein [Enterococcus faecalis CH188] gi|256999817|gb|EEU86337.1| ABC cobalt transporter ATP-binding protein [Enterococcus faecalis CH188] Length = 452 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|239626497|ref|ZP_04669528.1| predicted protein [Clostridiales bacterium 1_7_47_FAA] gi|239516643|gb|EEQ56509.1| predicted protein [Clostridiales bacterium 1_7_47FAA] Length = 512 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + K+ +I+I +F+G I+ +E + I++G NG GK+S+ E I G T Sbjct: 7 LMKISNIKIMNFKG---IESLEVKPARINILSGPNGMGKTSMLEGIRCAITGKTP----D 59 Query: 85 DSIKKRSIKT 94 D + + K+ Sbjct: 60 DYMAMGTSKS 69 >gi|300783237|ref|YP_003763528.1| ATPase [Amycolatopsis mediterranei U32] gi|299792751|gb|ADJ43126.1| ATPase [Amycolatopsis mediterranei U32] Length = 385 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L + + ++R ++ + + LT+V G NG GKSSL A+ L Sbjct: 2 LTTLAVENYRSLRDLV-LPLS-GLTVVTGPNGSGKSSLYRALRLLADAS 48 >gi|295399111|ref|ZP_06809093.1| DNA repair protein RecN [Geobacillus thermoglucosidasius C56-YS93] gi|312110286|ref|YP_003988602.1| DNA repair protein RecN [Geobacillus sp. Y4.1MC1] gi|294978577|gb|EFG54173.1| DNA repair protein RecN [Geobacillus thermoglucosidasius C56-YS93] gi|311215387|gb|ADP73991.1| DNA repair protein RecN [Geobacillus sp. Y4.1MC1] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|254994514|ref|ZP_05276704.1| hypothetical protein LmonocytoFSL_17167 [Listeria monocytogenes FSL J2-064] Length = 339 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKHGDSIKK 89 I + F +I IEF + + I+ G+N GKS++ EAI + Y + D + Sbjct: 1 HIKGLKKFKDID-IEFNEKINILVGENESGKSTILEAINIVLNQQYRSIDKYILKDLMNI 59 Query: 90 RSIK 93 S+K Sbjct: 60 NSMK 63 >gi|322420360|ref|YP_004199583.1| SMC domain-containing protein [Geobacter sp. M18] gi|320126747|gb|ADW14307.1| SMC domain protein [Geobacter sp. M18] Length = 362 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 27 FKLLDIEISHFRG-----FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL ++ I +F+G F+ LT + G NG GK+S+ +AI T+R Sbjct: 1 MKLKNVLIRNFKGVRSAEFSMEGPSHHPRPLTALLGDNGSGKTSILQAIALTLSMATRR 59 >gi|254418426|ref|ZP_05032150.1| hypothetical protein BBAL3_736 [Brevundimonas sp. BAL3] gi|196184603|gb|EDX79579.1| hypothetical protein BBAL3_736 [Brevundimonas sp. BAL3] Length = 245 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 ++ F ++T + G+NG GKS+L EA+ + + R +P+ Sbjct: 37 RLAFHPNVTFLVGENGSGKSTLIEALAVAWGFNAEGGGREHRFGTRDSHSPL 88 >gi|163801686|ref|ZP_02195584.1| hypothetical protein 1103602000597_AND4_09537 [Vibrio sp. AND4] gi|159174603|gb|EDP59405.1| hypothetical protein AND4_09537 [Vibrio sp. AND4] Length = 660 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL + +FR + +I D LT + G+N GKS++ A++ Sbjct: 1 MKLTKFRVRNFRSINDSGEITTND-LTAILGRNESGKSNILLALQ 44 >gi|48527207|gb|AAT45744.1| RecF [Rhizobium etli] Length = 374 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L ++++ FR + + ++ G NG GK++L EA+ L G RR Sbjct: 5 VSLSRLKLTDFRNYAA-ASLSLDGRHAVLTGDNGAGKTNLMEAVSLLSPGRGLRR 58 >gi|4127535|emb|CAA09427.1| RecN protein [Geobacillus stearothermophilus] Length = 56 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481987|gb|AAT66705.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481967|gb|AAT66695.1| DNA repair and genetic recombination protein [Bacillus thermantarcticus] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481977|gb|AAT66700.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481993|gb|AAT66708.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A92] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481969|gb|AAT66696.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] gi|49481975|gb|AAT66699.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] gi|49481983|gb|AAT66703.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] gi|49481985|gb|AAT66704.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|49481989|gb|AAT66706.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] Length = 573 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSIKNF-AIIESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|16799908|ref|NP_470176.1| hypothetical protein lin0834 [Listeria innocua Clip11262] gi|16413285|emb|CAC96066.1| lin0834 [Listeria innocua Clip11262] Length = 369 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +EI+ + +TE +I+ + L + +G N GKS+ ++I + + I Sbjct: 3 QISSLEINGLKSYTEKTEIKLS-QLNVFSGVNSVGKSTAIQSI------SLIKSLYDSYI 55 Query: 88 KKRSIKTPMPMC 99 K I + + Sbjct: 56 NKNKIISEAFLN 67 >gi|330448659|ref|ZP_08312307.1| recF/RecN/SMC N terminal domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492850|dbj|GAA06804.1| recF/RecN/SMC N terminal domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 246 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +I ++ F E+ IEF +T G+NG GKS+L EAI Sbjct: 12 IELKREKIDNYDQFPFSIPAIKELDFIEFHPDVTFFVGENGAGKSTLIEAIAVAMG 67 >gi|322372796|ref|ZP_08047332.1| DNA repair protein RecN [Streptococcus sp. C150] gi|321277838|gb|EFX54907.1| DNA repair protein RecN [Streptococcus sp. C150] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|319405030|emb|CBI78640.1| DNA replication and repair protein [Bartonella sp. AR 15-3] Length = 370 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ ++R + + H+ ++ G+NG GK++L EA+ +L G RR Sbjct: 1 MAVRQLKLENYRNYCSLALHLLGQHV-VLTGRNGVGKTNLLEALSFLSPGRGLRR 54 >gi|312862804|ref|ZP_07723044.1| DNA repair protein RecN [Streptococcus vestibularis F0396] gi|322516635|ref|ZP_08069549.1| DNA repair protein RecN [Streptococcus vestibularis ATCC 49124] gi|311101664|gb|EFQ59867.1| DNA repair protein RecN [Streptococcus vestibularis F0396] gi|322124905|gb|EFX96329.1| DNA repair protein RecN [Streptococcus vestibularis ATCC 49124] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|269793096|ref|YP_003318000.1| SMC domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100731|gb|ACZ19718.1| SMC domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 892 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 22/37 (59%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 GF + I F ++L ++ G G GKS++ E++ ++ Sbjct: 281 GFLDGAAIHFNENLNVLIGGRGTGKSTVIESLRYVLG 317 >gi|257416937|ref|ZP_05593931.1| ABC-type cobalt transport system [Enterococcus faecalis AR01/DG] gi|257158765|gb|EEU88725.1| ABC-type cobalt transport system [Enterococcus faecalis ARO1/DG] Length = 452 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|256616731|ref|ZP_05473577.1| ABC-type cobalt transport system [Enterococcus faecalis ATCC 4200] gi|256596258|gb|EEU15434.1| ABC-type cobalt transport system [Enterococcus faecalis ATCC 4200] gi|315032618|gb|EFT44550.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0017] Length = 452 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|228476928|ref|ZP_04061573.1| DNA repair protein RecN [Streptococcus salivarius SK126] gi|228251502|gb|EEK10647.1| DNA repair protein RecN [Streptococcus salivarius SK126] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|152963976|ref|YP_001359760.1| DNA replication and repair protein RecF [Kineococcus radiotolerans SRS30216] gi|189039627|sp|A6W3V7|RECF_KINRD RecName: Full=DNA replication and repair protein recF gi|151358493|gb|ABS01496.1| DNA replication and repair protein RecF [Kineococcus radiotolerans SRS30216] Length = 391 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +R + ++ ++ T G NG GK++L EAI ++ + R Sbjct: 1 MHVAHLSLVDYRSYPTLE-LDLRPGTTTFVGLNGQGKTNLVEAIGYVATLGSHRVSGDAP 59 Query: 87 IKKRSIK 93 + ++ + Sbjct: 60 LVRQGAE 66 >gi|149920074|ref|ZP_01908547.1| hypothetical protein PPSIR1_33104 [Plesiocystis pacifica SIR-1] gi|149819017|gb|EDM78454.1| hypothetical protein PPSIR1_33104 [Plesiocystis pacifica SIR-1] Length = 629 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ +E+ GF + +++FA +L + G G GK+++ E Sbjct: 13 KIRRLEVHG--GFWDGLELDFAANLNCIIGARGTGKTTILELCRHCLG 58 >gi|150402809|ref|YP_001330103.1| hypothetical protein MmarC7_0885 [Methanococcus maripaludis C7] gi|150033839|gb|ABR65952.1| hypothetical protein MmarC7_0885 [Methanococcus maripaludis C7] Length = 670 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 + KL + I +++ + I + D +T++ G N GK+S+ EA+ Sbjct: 12 MIKLTKLRIKNYKSIKDSGDIFLSSDGITVLAGMNESGKTSILEAL 57 >gi|55823132|ref|YP_141573.1| DNA repair and genetic recombination protein [Streptococcus thermophilus CNRZ1066] gi|55739117|gb|AAV62758.1| DNA repair and genetic recombination protein [Streptococcus thermophilus CNRZ1066] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|55821220|ref|YP_139662.1| DNA repair and genetic recombination protein [Streptococcus thermophilus LMG 18311] gi|55737205|gb|AAV60847.1| DNA repair and genetic recombination protein [Streptococcus thermophilus LMG 18311] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|53802865|ref|YP_115418.1| DNA replication and repair protein RecF [Methylococcus capsulatus str. Bath] gi|81680705|sp|Q602N2|RECF_METCA RecName: Full=DNA replication and repair protein recF gi|53756626|gb|AAU90917.1| DNA replication and repair protein RecF [Methylococcus capsulatus str. Bath] Length = 359 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL ++I+ R E + + L ++ G NG GK+SL EAI L G + R Sbjct: 1 MALLKLDIADVRNI-ESASLSPGEGLNLLFGANGSGKTSLLEAIYLLSRGKSFRSPQSGR 59 Query: 87 IKK 89 I + Sbjct: 60 IIR 62 >gi|116627946|ref|YP_820565.1| DNA repair and genetic recombination protein [Streptococcus thermophilus LMD-9] gi|116101223|gb|ABJ66369.1| ATPase involved in DNA repair [Streptococcus thermophilus LMD-9] gi|312278534|gb|ADQ63191.1| ATPase involved in DNA repair [Streptococcus thermophilus ND03] Length = 556 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEITIKNF-AIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|330898171|gb|EGH29590.1| hypothetical protein PSYJA_11650 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 850 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 27 FKLLDIE-ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 F L + S F+ K++ A +T+V G+NG GKSSL +A++ Sbjct: 77 FYLESLSGFSEFKKLRPTLKLDLAKRITLVFGRNGAGKSSLCQALK 122 >gi|329113487|ref|ZP_08242268.1| DNA replication and repair protein RecF [Acetobacter pomorum DM001] gi|326697312|gb|EGE48972.1| DNA replication and repair protein RecF [Acetobacter pomorum DM001] Length = 382 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +LL + +S+FR + E L ++ G+NG GK++L EA+ Sbjct: 13 RLLKLTLSNFRNY-ERLVWSPNASLLVLTGENGSGKTNLLEAV 54 >gi|326573748|gb|EGE23706.1| DNA repair protein RecN [Moraxella catarrhalis O35E] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|326572197|gb|EGE22193.1| DNA repair protein RecN [Moraxella catarrhalis BC7] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|326567833|gb|EGE17937.1| DNA repair protein RecN [Moraxella catarrhalis 12P80B1] gi|326568165|gb|EGE18247.1| DNA repair protein RecN [Moraxella catarrhalis BC8] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|326566130|gb|EGE16287.1| DNA repair protein RecN [Moraxella catarrhalis BC1] gi|326572808|gb|EGE22793.1| DNA repair protein RecN [Moraxella catarrhalis CO72] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|326565176|gb|EGE15367.1| DNA repair protein RecN [Moraxella catarrhalis 103P14B1] gi|326574627|gb|EGE24563.1| DNA repair protein RecN [Moraxella catarrhalis 101P30B1] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|325955600|ref|YP_004239260.1| DNA repair protein RecN [Weeksella virosa DSM 16922] gi|323438218|gb|ADX68682.1| DNA repair protein RecN [Weeksella virosa DSM 16922] Length = 550 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + +++F + ++EF LT + G+ G GKS L A++ + + Sbjct: 2 LQSLRVTNF-AIIDELEVEFEKGLTTITGETGAGKSILIGALKLVLGERADMKL 54 >gi|315173508|gb|EFU17525.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1346] Length = 452 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTNSVVKQPMLQLKNFRLSQGKRVLIEEKETLFFKGITTLTGPNGAGKSTLLKAI 285 >gi|296114063|ref|YP_003628001.1| DNA repair protein RecN [Moraxella catarrhalis RH4] gi|295921757|gb|ADG62108.1| DNA repair protein RecN [Moraxella catarrhalis RH4] gi|326559450|gb|EGE09873.1| DNA repair protein RecN [Moraxella catarrhalis 7169] gi|326561288|gb|EGE11647.1| DNA repair protein RecN [Moraxella catarrhalis 46P47B1] Length = 568 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E + I+F D ++ G+ G GKS + +A+ Sbjct: 14 EQKHIDFDDRFNVITGETGAGKSLILDALSLCVGERADSSM 54 >gi|261867833|ref|YP_003255755.1| ATP-dependent OLD family endonuclease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413165|gb|ACX82536.1| ATP-dependent OLD family endonuclease [Aggregatibacter actinomycetemcomitans D11S-1] Length = 584 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ IEI ++R E+ +I D L I+ GQN +GKS+L AI + F + Sbjct: 1 MKIKTIEIKNWRSIKEL-RISAQD-LMIIIGQNNHGKSNLLSAILFFFGEIKHQDL 54 >gi|257421621|ref|ZP_05598611.1| ABC transporter [Enterococcus faecalis X98] gi|257163445|gb|EEU93405.1| ABC transporter [Enterococcus faecalis X98] gi|315155628|gb|EFT99644.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0043] Length = 452 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|226952348|ref|ZP_03822812.1| possible ATP-dependent endonuclease of the OLD family-like protein [Acinetobacter sp. ATCC 27244] gi|226836900|gb|EEH69283.1| possible ATP-dependent endonuclease of the OLD family-like protein [Acinetobacter sp. ATCC 27244] Length = 248 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K++ +I +FR E + F + T++ G+N GK+S +E G + K+ D Sbjct: 1 MKIISAKIRNFRKL-ENVTLSFDEKTTVIVGRNNTGKTSTAEIFRSFLSGNSPNLKYVD 58 >gi|224538410|ref|ZP_03678949.1| hypothetical protein BACCELL_03304 [Bacteroides cellulosilyticus DSM 14838] gi|224519969|gb|EEF89074.1| hypothetical protein BACCELL_03304 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +AI +L + + Sbjct: 3 LKRISILNYKNL-EQVELSFSPKLNCFFGQNGMGKTNLLDAIYFLSFCKSSGNPIDSQNI 61 Query: 89 KRSIK 93 + + Sbjct: 62 RHDQE 66 >gi|206579422|ref|YP_002238628.1| hypothetical protein KPK_2798 [Klebsiella pneumoniae 342] gi|206568480|gb|ACI10256.1| conserved domain protein [Klebsiella pneumoniae 342] Length = 150 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L R G Sbjct: 2 IQYIRIQNFRSVRDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAADGRLSG 54 >gi|206576343|ref|YP_002238608.1| RecF/RecN/SMC N-terminal domain protein [Klebsiella pneumoniae 342] gi|206565401|gb|ACI07177.1| RecF/RecN/SMC N-terminal domain protein [Klebsiella pneumoniae 342] Length = 362 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I I +FR +I +E L IV G NG GKS++ AI L R G Sbjct: 2 IQYIRIQNFRSVRDIA-LELGP-LNIVFGPNGCGKSNIYNAIH-LLTAAADGRLSG 54 >gi|189467918|ref|ZP_03016703.1| hypothetical protein BACINT_04310 [Bacteroides intestinalis DSM 17393] gi|189436182|gb|EDV05167.1| hypothetical protein BACINT_04310 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +AI +L + + Sbjct: 3 LKRISILNYKNL-EQVELSFSPKLNCFFGQNGMGKTNLLDAIYFLSFCKSSGNPIDSQNI 61 Query: 89 KRSIK 93 + + Sbjct: 62 RHDQE 66 >gi|86139415|ref|ZP_01057984.1| recombination protein F [Roseobacter sp. MED193] gi|85823918|gb|EAQ44124.1| recombination protein F [Roseobacter sp. MED193] Length = 365 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L ++ +SHFR ++ ++G+NG GK+++ EA+ G RR Sbjct: 1 MLALTELTLSHFRSHL-RAELHLDGRPVAIHGKNGAGKTNILEAVSLFSPGRGLRRASAA 59 Query: 86 SIKKR 90 + +R Sbjct: 60 DMVRR 64 >gi|67483574|ref|XP_657007.1| SMC5 protein [Entamoeba histolytica HM-1:IMSS] gi|56474241|gb|EAL51621.1| SMC5 protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1027 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 4 LRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGK 63 ++++NT + T+ Y R I ++ + F + ++ L ++ G NG GK Sbjct: 1 MKRQNT------TQTTQYHRGSIIRIK---MERFLTYDSVEVFP-GKGLNVIIGPNGAGK 50 Query: 64 SSLSEAIEWLFYGYTQRRKHGDSIKK 89 SS+ AI + +K Sbjct: 51 SSIVCAIALGLGTAPKVLGRSKDLKD 76 >gi|332687193|ref|YP_004456967.1| DNA double-strand break repair rad50 ATPase [Melissococcus plutonius ATCC 35311] gi|332371202|dbj|BAK22158.1| DNA double-strand break repair rad50 ATPase [Melissococcus plutonius ATCC 35311] Length = 620 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ IEI F G + +KI F ++ +VNG+N GKS++ + I+ + +G+ R K Sbjct: 1 MKITAIEIVGF-GKWQQKKINFTENNQLVNGKNEAGKSTIYQFIQTILFGFPARGKKK 57 >gi|323188634|gb|EFZ73919.1| hypothetical protein ECRN5871_3053 [Escherichia coli RN587/1] Length = 731 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 11/78 (14%) Query: 32 IEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + I R + + +EF + ++T++ GQNG GKS++S GY + D + Sbjct: 4 LSIHGVRSYQGERPVEFDLSKYVTLIYGQNGSGKSTVS--------GYFYKHGRPDY-SQ 54 Query: 90 RSIKTPMPMCMAVPRCKY 107 +++ P+ M V +Y Sbjct: 55 CNLQPPLNMNYLVFNQEY 72 >gi|320195091|gb|EFW69720.1| hypothetical protein EcoM_02854 [Escherichia coli WV_060327] Length = 731 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 11/78 (14%) Query: 32 IEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + I R + + +EF + ++T++ GQNG GKS++S GY + D + Sbjct: 4 LSIHGVRSYQGERPVEFDLSKYVTLIYGQNGSGKSTVS--------GYFYKHGRPDY-SQ 54 Query: 90 RSIKTPMPMCMAVPRCKY 107 +++ P+ M V +Y Sbjct: 55 CNLQPPLNMNYLVFNQEY 72 >gi|304373610|ref|YP_003858355.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB16] gi|299829566|gb|ADJ55359.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB16] Length = 565 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T++ G+NG GKS+L EA+ + +G + R Sbjct: 31 TLITGKNGGGKSTLIEALTYALFGKSFRDLK 61 >gi|294793135|ref|ZP_06758281.1| hypothetical protein HMPREF0874_01602 [Veillonella sp. 6_1_27] gi|294456080|gb|EFG24444.1| hypothetical protein HMPREF0874_01602 [Veillonella sp. 6_1_27] Length = 961 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I F + + + + ++ G N GK+SL E + L +G T + Sbjct: 1 MMNIKRIRFDEFGPYRDWSFTTGDNGVQLMYGPNESGKTSLLEGMRTLLFGGTHK 55 >gi|294794827|ref|ZP_06759962.1| hypothetical protein HMPREF0873_01438 [Veillonella sp. 3_1_44] gi|294454189|gb|EFG22563.1| hypothetical protein HMPREF0873_01438 [Veillonella sp. 3_1_44] Length = 965 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I F + + + + ++ G N GK+SL E + L +G T + Sbjct: 1 MMNIKRIRFDEFGPYRDWSFTTGDNGVQLMYGPNESGKTSLLEGMRTLLFGGTHK 55 >gi|282849318|ref|ZP_06258703.1| hypothetical protein HMPREF1035_0268 [Veillonella parvula ATCC 17745] gi|282581022|gb|EFB86420.1| hypothetical protein HMPREF1035_0268 [Veillonella parvula ATCC 17745] Length = 961 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I F + + + + ++ G N GK+SL E + L +G T + Sbjct: 1 MMNIKRIRFDEFGPYRDWSFTTGDNGVQLMYGPNESGKTSLLEGMRTLLFGGTHK 55 >gi|284041168|ref|YP_003391098.1| SMC domain protein [Spirosoma linguale DSM 74] gi|283820461|gb|ADB42299.1| SMC domain protein [Spirosoma linguale DSM 74] Length = 420 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 6/50 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAI 70 I + + R F Q I F D ++ G NG GK+++ + I Sbjct: 8 VWFKSISLENVRSFGTKQTINFTDKDGNAARWNVILGDNGTGKTTVLKCI 57 >gi|218197381|gb|EEC79808.1| hypothetical protein OsI_21247 [Oryza sativa Indica Group] Length = 1179 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F + + L +V G NG GKSSL AI S+ Sbjct: 40 IVEIELCNFMTY-DHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPAILGRASSV 97 >gi|209946152|gb|ACI97307.1| RAD50 [Drosophila simulans] Length = 633 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|167384472|ref|XP_001736969.1| structural maintenance of chromosomes protein [Entamoeba dispar SAW760] gi|165900465|gb|EDR26776.1| structural maintenance of chromosomes protein, putative [Entamoeba dispar SAW760] Length = 1027 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 4 LRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGK 63 ++++NT + T+ Y R I ++ + F + ++ L ++ G NG GK Sbjct: 1 MKRQNT------TQTAQYHRGSIIRIK---MERFLTYDSVEVFP-GKGLNVIIGPNGAGK 50 Query: 64 SSLSEAIEWLFYGYTQRRKHGDSIKK 89 SS+ AI + +K Sbjct: 51 SSIVCAIALGLGTAPKVLGRSKDLKD 76 >gi|149199123|ref|ZP_01876162.1| abortive infection protein, putative [Lentisphaera araneosa HTCC2155] gi|149137720|gb|EDM26134.1| abortive infection protein, putative [Lentisphaera araneosa HTCC2155] Length = 421 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Query: 53 TIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDSIKKR 90 T++ G NG GKS++ EA+ + + + R + GD +K Sbjct: 46 TVIYGANGSGKSNVIEAMSFCKNYVRDSIRNQEGDKVKDL 85 >gi|33863137|ref|NP_894697.1| RecF protein:ABC transporter [Prochlorococcus marinus str. MIT 9313] gi|33635054|emb|CAE21040.1| RecF protein:ABC transporter [Prochlorococcus marinus str. MIT 9313] Length = 918 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +LL + + R ++F+ LT+++G N GKSSL EA+ Sbjct: 1 MRLLHCHLENIRRHR-FLDLDFSPGLTLISGANESGKSSLVEAM 43 >gi|307133245|ref|YP_003885261.1| gap repair protein [Dickeya dadantii 3937] gi|306530774|gb|ADN00705.1| gap repair protein [Dickeya dadantii 3937] Length = 361 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIRDFRNI-ESADLALIPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAAR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|271498581|ref|YP_003331606.1| DNA replication and repair protein RecF [Dickeya dadantii Ech586] gi|270342136|gb|ACZ74901.1| DNA replication and repair protein RecF [Dickeya dadantii Ech586] Length = 361 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIRDFRNI-ESADLALIPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAAR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|251787655|ref|YP_003002376.1| recombination protein F [Dickeya zeae Ech1591] gi|247536276|gb|ACT04897.1| DNA replication and repair protein RecF [Dickeya zeae Ech1591] Length = 361 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIRDFRNI-ESADLALIPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAAR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHEQ 65 >gi|159901241|ref|YP_001547488.1| AAA ATPase [Herpetosiphon aurantiacus ATCC 23779] gi|159894280|gb|ABX07360.1| AAA ATPase [Herpetosiphon aurantiacus ATCC 23779] Length = 269 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAI 70 Q +F +TI+ G NG GKS+ E + Sbjct: 32 QTFDFEAPVTIIVGDNGSGKSTFLEGL 58 >gi|167647768|ref|YP_001685431.1| hypothetical protein Caul_3807 [Caulobacter sp. K31] gi|167350198|gb|ABZ72933.1| conserved hypothetical membrane spanning protein [Caulobacter sp. K31] Length = 691 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ +EI +FR I + T++ G+N GK+S++E L T Sbjct: 1 MRIKHVEIENFRLLR-KVAIGLEERTTLIVGRNNSGKTSIAELFRRLLSERT 51 >gi|27227807|emb|CAD59412.1| SMC5 protein [Oryza sativa] Length = 1056 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +++IE+ +F + + L +V G NG GKSSL AI Q S+ Sbjct: 24 IVEIELCNFMTY-DHLTCRPGPRLNLVVGPNGSGKSSLVCAIALALAADPQILGRASSV 81 >gi|329894832|ref|ZP_08270632.1| DNA recombination and repair protein RecF [gamma proteobacterium IMCC3088] gi|328922726|gb|EGG30060.1| DNA recombination and repair protein RecF [gamma proteobacterium IMCC3088] Length = 428 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHGDS 86 L I+I++ R + + + + + G NG GK+S+ EAI L YG + R+ D+ Sbjct: 2 LTRIQIANLRNIAMQEIGDLSP-VNVFLGDNGVGKTSVLEAIHTLGYGRSFRKQGGQKDA 60 Query: 87 IKKRSIK 93 + + + Sbjct: 61 LVRYGCE 67 >gi|307105756|gb|EFN54004.1| hypothetical protein CHLNCDRAFT_58355 [Chlorella variabilis] Length = 1141 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +E+S+F + + +E L +V G NG GKSSL AI G T + + Sbjct: 15 VMRVEVSNFMTY-KRATVEPGPKLNLVLGPNGTGKSSLVCAICVGLAGRTSLLGRAEDV 72 >gi|268611909|ref|ZP_06145636.1| hypothetical protein RflaF_20681 [Ruminococcus flavefaciens FD-1] Length = 245 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 21 YARKLIFKLLDIE----ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 Y L + +IE + + I ++ F +T G+NG GKS+L EAI + YG Sbjct: 8 YLTGLKIQWKNIECDSYLKNIEAIRSIDELYFHSPVTFFVGENGSGKSTLLEAIA-VAYG 66 Query: 77 YTQRRKHGDSIKKRSIKTPMPMCMA 101 + + + + +C A Sbjct: 67 FNPEGGTLNY-SFSTFDSHSELCEA 90 >gi|256820016|ref|YP_003141295.1| DNA replication and repair protein RecF [Capnocytophaga ochracea DSM 7271] gi|256581599|gb|ACU92734.1| DNA replication and repair protein RecF [Capnocytophaga ochracea DSM 7271] Length = 373 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + L I + +++ Q F+ + G NG GK++L +AI Sbjct: 1 MMFLKQISVVNYKNILS-QAYAFSPTINCFVGDNGVGKTNLLDAI 44 >gi|255282888|ref|ZP_05347443.1| putative abortive infection protein [Bryantella formatexigens DSM 14469] gi|255266662|gb|EET59867.1| putative abortive infection protein [Bryantella formatexigens DSM 14469] Length = 420 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 19/89 (21%) Query: 29 LLDIEISHFRGFTEIQKIE--------FAD-----------HLTIVNGQNGYGKSSLSEA 69 L+ +F+ F + ++ FA+ + + G N GKS++ A Sbjct: 2 LIQFSFKNFKSFRDEATLDLSAAKMTEFAERVVTVGNERILPIAAIYGANASGKSNIYNA 61 Query: 70 IEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 E++ + K+GD ++ P P Sbjct: 62 FEYMADYVIESFKYGDEEERFEEFKPTPF 90 >gi|209946194|gb|ACI97328.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|254461244|ref|ZP_05074660.1| branched-chain amino acid ABC transporter, ATP-binding protein [Rhodobacterales bacterium HTCC2083] gi|206677833|gb|EDZ42320.1| branched-chain amino acid ABC transporter, ATP-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 273 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + ++ +++ HF GF + +E A+ +T + G NG GK++L I + + R Sbjct: 16 VIRVENLQ-KHFGGFHAVDGASLEIAEGSITGLVGPNGAGKTTLFNVIAGVLPPTSGRVF 74 Query: 83 HGD 85 D Sbjct: 75 MAD 77 >gi|163738136|ref|ZP_02145552.1| DNA replication and repair protein RecF [Phaeobacter gallaeciensis BS107] gi|161388752|gb|EDQ13105.1| DNA replication and repair protein RecF [Phaeobacter gallaeciensis BS107] Length = 365 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + +SHFR + ++G NG GK+++ EA+ G RR Sbjct: 1 MLALTTLTLSHFRSHL-RADLHLDGRPVAIHGANGAGKTNILEAVSLFSPGRGLRRASAA 59 Query: 86 SIKKR 90 + +R Sbjct: 60 DMARR 64 >gi|163743746|ref|ZP_02151120.1| recombination protein F [Phaeobacter gallaeciensis 2.10] gi|161383007|gb|EDQ07402.1| recombination protein F [Phaeobacter gallaeciensis 2.10] Length = 365 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + +SHFR + ++G NG GK+++ EA+ G RR Sbjct: 1 MLALTTLTLSHFRSHL-RADLHLDGRPVAIHGANGAGKTNILEAVSLFSPGRGLRRASAA 59 Query: 86 SIKKR 90 + +R Sbjct: 60 DMARR 64 >gi|89892910|ref|YP_516397.1| hypothetical protein DSY0164 [Desulfitobacterium hafniense Y51] gi|89332358|dbj|BAE81953.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 383 Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++++ F + L +V G NG GKS+L +AI Sbjct: 1 MKLANLLSFGSETTDIQLNSLNVVVGPNGSGKSNLIDAI 39 >gi|227515675|ref|ZP_03945724.1| DNA repair protein RecN [Lactobacillus fermentum ATCC 14931] gi|227085978|gb|EEI21290.1| DNA repair protein RecN [Lactobacillus fermentum ATCC 14931] Length = 564 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMA 101 + +EF DH+T++ G+ G GKS + +A+ L G R + I+K K + Sbjct: 14 DHLSLEFDDHMTVLTGETGAGKSIIIDAVSLLAGG----RGSQEFIRKGEEKLSLQGQFE 69 Query: 102 VPR 104 +P+ Sbjct: 70 IPK 72 >gi|218678131|ref|ZP_03526028.1| ATP-dependent endonuclease of the OLD family-like protein [Rhizobium etli CIAT 894] Length = 85 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 29 LLDIEISHFRGFTEIQ------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I +FR F+ LT+ G NG GK+S+ EA+++LF G Sbjct: 8 VRELSIDNFRCFSAETIKLAVPNGSHGSGLTLFVGNNGTGKTSVLEALDYLFSG 61 >gi|194746442|ref|XP_001955689.1| GF18888 [Drosophila ananassae] gi|190628726|gb|EDV44250.1| GF18888 [Drosophila ananassae] Length = 1121 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 2 TRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGY 61 + + ++ T L+ L+ A K++ + +++F + + +EF ++ + G NG Sbjct: 71 SNMSQRATSFNLTSELSVPNAFDRCGKVISMRLTNFMCHSNLL-VEFGPNINFLVGNNGS 129 Query: 62 GKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 GKS++ A+ + SI+K Sbjct: 130 GKSAVITALALGLTSSARATSRASSIQKL 158 >gi|184155733|ref|YP_001844073.1| DNA repair protein RecN [Lactobacillus fermentum IFO 3956] gi|260663550|ref|ZP_05864440.1| DNA repair protein RecN [Lactobacillus fermentum 28-3-CHN] gi|183227077|dbj|BAG27593.1| DNA repair protein RecN [Lactobacillus fermentum IFO 3956] gi|260552091|gb|EEX25144.1| DNA repair protein RecN [Lactobacillus fermentum 28-3-CHN] gi|299783412|gb|ADJ41410.1| DNA repair protein RecN [Lactobacillus fermentum CECT 5716] Length = 564 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMA 101 + +EF DH+T++ G+ G GKS + +A+ L G R + I+K K + Sbjct: 14 DHLSLEFDDHMTVLTGETGAGKSIIIDAVSLLAGG----RGSQEFIRKGEEKLSLQGQFE 69 Query: 102 VPR 104 +P+ Sbjct: 70 IPK 72 >gi|78186857|ref|YP_374900.1| ATPase involved in DNA repair-like [Chlorobium luteolum DSM 273] gi|78166759|gb|ABB23857.1| ATPase involved in DNA repair-like protein [Chlorobium luteolum DSM 273] Length = 910 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L+ + ++R + ++EF TI+ G N GKS+L EA+ Sbjct: 1 MRLISATVRNYRIHRD-TRVEFDPSRTIIGGGNETGKSTLVEAL 43 >gi|61806323|ref|YP_214682.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM4] gi|61563867|gb|AAX46922.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM4] Length = 572 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + I+ D T++ G NG GKS++ +A+ + + R+ Sbjct: 1 MIVFETIAWKNFLSTGDQWTDIQLDDAGATLIVGSNGAGKSTMLDALCFALFNKPFRKIS 60 Query: 84 GDSIKKRSIK--TPMPMCMAVPRCKYQL 109 + + T + + ++ R +Y++ Sbjct: 61 KSQLVNSINEKGTKVQVTFSIGRDEYRV 88 >gi|89098570|ref|ZP_01171453.1| sbcC [Bacillus sp. NRRL B-14911] gi|89086815|gb|EAR65933.1| sbcC [Bacillus sp. NRRL B-14911] Length = 1046 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K L + + F + ++I+F+ + +++G+ G GK+++ + I + YG Sbjct: 1 MKPLKLAMQAFGPYAGTEEIDFSSLGSKTMFVISGKTGAGKTTIFDGISYAIYG 54 >gi|326331323|ref|ZP_08197615.1| hypothetical protein NBCG_02761 [Nocardioidaceae bacterium Broad-1] gi|325950956|gb|EGD43004.1| hypothetical protein NBCG_02761 [Nocardioidaceae bacterium Broad-1] Length = 1120 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 25/40 (62%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 ++++ ++ G+ ++ F+ T++ G +G GKS+L +A Sbjct: 23 SELQLVNWGGYDGAHRVRFSPTATLLTGGSGSGKSTLMDA 62 >gi|300905018|ref|ZP_07122836.1| hypothetical protein HMPREF9536_03083 [Escherichia coli MS 84-1] gi|301305817|ref|ZP_07211902.1| hypothetical protein HMPREF9347_04437 [Escherichia coli MS 124-1] gi|300403167|gb|EFJ86705.1| hypothetical protein HMPREF9536_03083 [Escherichia coli MS 84-1] gi|300838907|gb|EFK66667.1| hypothetical protein HMPREF9347_04437 [Escherichia coli MS 124-1] gi|315254409|gb|EFU34377.1| conserved hypothetical protein [Escherichia coli MS 85-1] Length = 609 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + I +F+ + +I+F +T + G+NG KSS+ +A+ +G R Sbjct: 26 IQHIRFPYFKNIEQNARIDFQFPITALVGKNGTNKSSVIKALFGCPHGKNITR 78 >gi|170017431|ref|YP_001728350.1| hypothetical protein LCK_01079 [Leuconostoc citreum KM20] gi|169804288|gb|ACA82906.1| Protein of unknown function [Leuconostoc citreum KM20] Length = 796 Score = 40.4 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ I+I+ F +++ +F + GQN GKS+L + + +G+ ++ Sbjct: 3 MKIKRIQINGFGRWSQKT-FDFVSDFQAIVGQNESGKSTLRAFMVSMLFGFPTKKGQ 58 >gi|330448262|ref|ZP_08311910.1| conserved protein with nucleoside triphosphate hydrolase domain [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492453|dbj|GAA06407.1| conserved protein with nucleoside triphosphate hydrolase domain [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 546 Score = 40.4 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L IEIS FRG + + F + LT++ G+N +GKSSL +A+ Sbjct: 1 MHLESIEISGFRGI-KRLSLSFNE-LTVLIGENAWGKSSLLDAL 42 >gi|113953447|ref|YP_730384.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. CC9311] gi|113880798|gb|ABI45756.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. CC9311] Length = 883 Score = 40.4 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ E + R ++ ++FA LT++ G N GKSSL EA+ + Sbjct: 1 MRLIRSEFTSVRRHQDLA-LDFAPGLTVIGGANESGKSSLVEALHRTLFVRAASSGTAAQ 59 Query: 87 IKKRSIKTPMP 97 + + P Sbjct: 60 DLRSQVHAGHP 70 >gi|330829409|ref|YP_004392361.1| putative ATP-dependent endonuclease of the OLD family [Aeromonas veronii B565] gi|328804545|gb|AEB49744.1| Predicted ATP-dependent endonuclease of the OLD family [Aeromonas veronii B565] Length = 545 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L IE+ FRG I ++ D T++ G+N +GKSSL A+ W G Sbjct: 1 MFLERIEVKGFRG---INRLSLGLDQTTVLIGENTWGKSSLLRAL-WCLLGQDAE 51 >gi|323942313|gb|EGB38484.1| hypothetical protein ERDG_01137 [Escherichia coli E482] Length = 457 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + I +F+ + +I+F +T + G+NG KSS+ +A+ +G R Sbjct: 26 IQHIRFPYFKNIEQNARIDFQFPITALVGKNGTNKSSVIKALFGCPHGKNITR 78 >gi|307288614|ref|ZP_07568595.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0109] gi|306500368|gb|EFM69704.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0109] Length = 452 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTNSVVKQPMLQLKNFRLSQGKRVLIEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|260654718|ref|ZP_05860206.1| putative ATP-dependent dsDNA exonuclease [Jonquetella anthropi E3_33 E1] gi|260630433|gb|EEX48627.1| putative ATP-dependent dsDNA exonuclease [Jonquetella anthropi E3_33 E1] Length = 895 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Query: 28 KLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + + + F + L + G G GKSSL +AI YG T R Sbjct: 9 RLCRVSLENLNSLAGSWSVNFEEPAYSGGLFAILGPTGAGKSSLLDAICLGLYGATPR 66 >gi|256960986|ref|ZP_05565157.1| ABC-type cobalt transporter [Enterococcus faecalis Merz96] gi|293384627|ref|ZP_06630492.1| ABC transporter, ATP-binding protein [Enterococcus faecalis R712] gi|293386766|ref|ZP_06631337.1| ABC transporter, ATP-binding protein [Enterococcus faecalis S613] gi|312906451|ref|ZP_07765459.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 512] gi|312979391|ref|ZP_07791079.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 516] gi|256951482|gb|EEU68114.1| ABC-type cobalt transporter [Enterococcus faecalis Merz96] gi|291078085|gb|EFE15449.1| ABC transporter, ATP-binding protein [Enterococcus faecalis R712] gi|291083769|gb|EFE20732.1| ABC transporter, ATP-binding protein [Enterococcus faecalis S613] gi|310627605|gb|EFQ10888.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 512] gi|311287762|gb|EFQ66318.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 516] Length = 452 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTTSVVKQPMLQLKNFRLSQGKRVLLEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|119178254|ref|XP_001240817.1| hypothetical protein CIMG_07980 [Coccidioides immitis RS] Length = 1223 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 12/67 (17%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++++I I F+ + I +G GKS++ +AI ++ + Sbjct: 1 MRIVEIIIDGFKSYAVRTVI------------SGCGKSNILDAICFVLGITNMSTVRAQN 48 Query: 87 IKKRSIK 93 ++ K Sbjct: 49 LQDLIYK 55 >gi|28572277|ref|NP_789057.1| DNA repair protein RecN [Tropheryma whipplei TW08/27] gi|28410408|emb|CAD66794.1| DNA repair protein RecN [Tropheryma whipplei TW08/27] Length = 545 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I +F I+F T++ G+ G GK+ L A+E L Sbjct: 2 IEQISIRNFGNIA-KADIDFGSDFTVITGETGAGKTMLLGALETLLG 47 >gi|28493069|ref|NP_787230.1| recombination and DNA repair protein [Tropheryma whipplei str. Twist] gi|28476109|gb|AAO44199.1| recombination and DNA repair protein [Tropheryma whipplei str. Twist] Length = 545 Score = 40.4 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I I +F I+F T++ G+ G GK+ L A+E L Sbjct: 2 IEQISIRNFGNIA-KADIDFGSDFTVITGETGAGKTMLLGALETLLG 47 >gi|320166843|gb|EFW43742.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 625 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 LL + + +F+ F ++ +F+ ++ G+NG+GK+ L AI Y R Sbjct: 31 LLSLRLQNFKRFHDLV-FKFSSSPKVIAGRNGFGKTQLLWAIMVYLRAYNAR 81 >gi|317481502|ref|ZP_07940567.1| DNA replication and repair protein RecF [Bacteroides sp. 4_1_36] gi|316902348|gb|EFV24237.1| DNA replication and repair protein RecF [Bacteroides sp. 4_1_36] Length = 370 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELSFSPKLNCFFGQNGMGKTNLLDAVYFLSFCKSA 52 >gi|312213375|emb|CBX93457.1| similar to structural maintenance of chromosomes protein 5 [Leptosphaeria maculans] Length = 1143 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 L+ +++ +F +T + L ++ G NG GKS+L AI ++ G Sbjct: 80 LIRVKLKNFVTYTAAE-FLLGPSLNMIIGPNGTGKSTLVCAICLGLGWGSEHLGRAKDLG 138 Query: 85 DSIKKRSIKTPMPMCMA 101 +K + + + + +A Sbjct: 139 AFVKHGATEAEIEIELA 155 >gi|308126085|ref|ZP_07663627.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus AQ4037] gi|308108734|gb|EFO46274.1| nucleoside triphosphate hydrolase domain protein [Vibrio parahaemolyticus AQ4037] Length = 245 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ Sbjct: 1 MRLERIEISGFRGI-KRLSLSF-DELTTLIGENTWGKSSLLDALSIAL 46 >gi|270265317|ref|ZP_06193578.1| hypothetical protein SOD_m00490 [Serratia odorifera 4Rx13] gi|270040721|gb|EFA13824.1| hypothetical protein SOD_m00490 [Serratia odorifera 4Rx13] Length = 553 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS+F E++ I+F +T + G+ G GKS +A+ Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLG 47 >gi|209946200|gb|ACI97331.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|167461944|ref|ZP_02327033.1| hypothetical protein Plarl_05210 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 1085 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ I++ F + + LT+ +G N GKS+L I + +G+ R Sbjct: 1 MKITSIQVDGFGSLNKRHH-DLTAGLTVFHGANEAGKSTLLAFIRAVLFGFPPRS 54 >gi|160890975|ref|ZP_02071978.1| hypothetical protein BACUNI_03420 [Bacteroides uniformis ATCC 8492] gi|270294288|ref|ZP_06200490.1| conserved hypothetical protein [Bacteroides sp. D20] gi|156859196|gb|EDO52627.1| hypothetical protein BACUNI_03420 [Bacteroides uniformis ATCC 8492] gi|270275755|gb|EFA21615.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 370 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELSFSPKLNCFFGQNGMGKTNLLDAVYFLSFCKSA 52 >gi|157371921|ref|YP_001479910.1| recombination and repair protein [Serratia proteamaculans 568] gi|157323685|gb|ABV42782.1| DNA repair protein RecN [Serratia proteamaculans 568] Length = 553 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS+F E++ I+F +T + G+ G GKS +A+ Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGMTAITGETGAGKSIAIDALGLCLG 47 >gi|24668225|ref|NP_649334.2| Smc5, isoform A [Drosophila melanogaster] gi|23094255|gb|AAF51749.2| Smc5, isoform A [Drosophila melanogaster] Length = 735 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +++L ++ + F ++EI +L ++ G NG GKS++ AI G Sbjct: 9 SKQLAGRIHSVYCKDFVSYSEIT-FHPKHYLNVLTGPNGSGKSTIVSAIILGLGG 62 >gi|324019255|gb|EGB88474.1| DNA sulfur modification protein DndD [Escherichia coli MS 117-3] Length = 666 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 13/79 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFNGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRLALYG 60 Query: 77 YTQRRK---HGDSIKKRSI 92 D I+ S Sbjct: 61 RLAFGLATQQQDYIEHLSS 79 >gi|320529112|ref|ZP_08030204.1| DNA repair protein RecN [Selenomonas artemidis F0399] gi|320138742|gb|EFW30632.1| DNA repair protein RecN [Selenomonas artemidis F0399] Length = 574 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F E +EF L I+ G+ G GKS L +A+ + +R D+I+ Sbjct: 2 LKSLHIRNF-ALLEEVSVEFGAGLNILTGETGAGKSILIDALGAILG----QRISTDAIR 56 >gi|313886153|ref|ZP_07819885.1| conserved domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924414|gb|EFR35191.1| conserved domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 371 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 5/70 (7%) Query: 27 FKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L + I F+ E + F D +T++ G NG GKS++ + Y Sbjct: 6 LRLTKLSIRGFKSIDTNEGVDLNFGD-ITLLMGANGAGKSNIVS--FFTMLNYMMSGGFQ 62 Query: 85 DSIKKRSIKT 94 IK+ Sbjct: 63 RYIKQYGTSQ 72 >gi|331685338|ref|ZP_08385924.1| DNA sulfur modification protein DndD [Escherichia coli H299] gi|323939573|gb|EGB35779.1| DNA sulfur modification protein DndD [Escherichia coli E482] gi|331077709|gb|EGI48921.1| DNA sulfur modification protein DndD [Escherichia coli H299] Length = 666 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 13/79 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFNGTHTIDLAPRKRPHEVSPRPIVLFGGLNGAGKTSILSAIRLALYG 60 Query: 77 YTQRRK---HGDSIKKRSI 92 D I+ S Sbjct: 61 RLAFGLATQQQDYIEHLSS 79 >gi|300974244|ref|ZP_07172517.1| DNA sulfur modification protein DndD [Escherichia coli MS 45-1] gi|300410652|gb|EFJ94190.1| DNA sulfur modification protein DndD [Escherichia coli MS 45-1] Length = 666 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 13/79 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFNGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRLALYG 60 Query: 77 YTQRRK---HGDSIKKRSI 92 D I+ S Sbjct: 61 RLAFGLATQQQDYIEHLSS 79 >gi|288935594|ref|YP_003439653.1| SMC domain protein [Klebsiella variicola At-22] gi|288890303|gb|ADC58621.1| SMC domain protein [Klebsiella variicola At-22] Length = 362 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------FYGYTQRR 81 + I I +FR +I +E L IV G NG GKS++ AI L G+ Sbjct: 2 IQYIRIQNFRSVRDIA-LELGP-LNIVFGPNGCGKSNIYNAIHLLTAAADGKLSGFISEE 59 Query: 82 KHGDSIKKRSIKTP 95 +++ ++P Sbjct: 60 GGLENMMWSGERSP 73 >gi|255524481|ref|ZP_05391436.1| SMC domain protein [Clostridium carboxidivorans P7] gi|296185983|ref|ZP_06854388.1| RecF/RecN/SMC [Clostridium carboxidivorans P7] gi|255511777|gb|EET88062.1| SMC domain protein [Clostridium carboxidivorans P7] gi|296049251|gb|EFG88680.1| RecF/RecN/SMC [Clostridium carboxidivorans P7] Length = 250 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 18/27 (66%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++F +T + G+NG GKS++ EAI Sbjct: 37 NTLDFHPKVTFIVGENGTGKSTILEAI 63 >gi|170748658|ref|YP_001754918.1| DNA replication and repair protein RecF [Methylobacterium radiotolerans JCM 2831] gi|170655180|gb|ACB24235.1| DNA replication and repair protein RecF [Methylobacterium radiotolerans JCM 2831] Length = 384 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + FR +++ A + G+NG GK++L EA+ G RR + Sbjct: 16 LRVTRLIARDFRNHADLELTPRAR-FVALVGENGAGKTNLLEALSLFVPGRGLRRAEFAA 74 Query: 87 IKKRS 91 + + Sbjct: 75 MARSG 79 >gi|160934287|ref|ZP_02081674.1| hypothetical protein CLOLEP_03158 [Clostridium leptum DSM 753] gi|156866960|gb|EDO60332.1| hypothetical protein CLOLEP_03158 [Clostridium leptum DSM 753] Length = 561 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E I+F++ L ++ G+ G GKS L +AI + T R Sbjct: 14 ERVTIDFSNQLNVLTGETGAGKSILIDAINAILGQRTSRDL 54 >gi|17551014|ref|NP_509954.1| hypothetical protein C44C10.10 [Caenorhabditis elegans] gi|3874982|emb|CAA93640.1| C. elegans predicted protein C44C10.10 [Caenorhabditis elegans] Length = 127 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 13 LSKSLTSYYARKLI---FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 LS S + + KLI +LL I + +F +++ F +T + G NG GKS+L A Sbjct: 32 LSMSASGGFIIKLIDSMTQLLSISVKNFMCLEDVKYESFGK-ITTITGPNGCGKSALVRA 90 Query: 70 I 70 I Sbjct: 91 I 91 >gi|113969181|ref|YP_732974.1| hypothetical protein Shewmr4_0837 [Shewanella sp. MR-4] gi|113883865|gb|ABI37917.1| conserved hypothetical protein [Shewanella sp. MR-4] Length = 644 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 29 LLDIEISHFRGFTEIQKIEF--ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I + +F+ + + D+ T G NG GKSS+ EA++ F + S Sbjct: 2 IFSIFLRNFKIYRGWNYVPISTGDYFTAFIGDNGVGKSSILEALDTFFNRPMSEWNYNHS 61 Query: 87 IKKRSIKTPMPMC 99 I K +C Sbjct: 62 IIKSGFDREPNIC 74 >gi|315607883|ref|ZP_07882876.1| recombination protein F [Prevotella buccae ATCC 33574] gi|315250352|gb|EFU30348.1| recombination protein F [Prevotella buccae ATCC 33574] Length = 372 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + I +++ + ++ + + + G NG GK++ +A+ +L + + Sbjct: 1 MVLRKLSIVNYKNIR-VTNVDLSPKMNCLIGHNGVGKTNFLDAVYYLSFCRSA 52 >gi|255007766|ref|ZP_05279892.1| putative DNA replication and repair protein [Bacteroides fragilis 3_1_12] gi|313145469|ref|ZP_07807662.1| DNA replication and repair protein recF [Bacteroides fragilis 3_1_12] gi|313134236|gb|EFR51596.1| DNA replication and repair protein recF [Bacteroides fragilis 3_1_12] Length = 370 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELNFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSAGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|222529581|ref|YP_002573463.1| ATP-dependent OLD family endonuclease [Caldicellulosiruptor bescii DSM 6725] gi|222456428|gb|ACM60690.1| ATP-dependent OLD family endonuclease [Caldicellulosiruptor bescii DSM 6725] Length = 652 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + I +++ F + +I + + GQN GKS++ +A++ +F+ +++ Sbjct: 1 MYISKMRIRNYKSFLDSGEIMLDEKIFAFIGQNNTGKSTILDAVK-VFFPNYKKQVDKKD 59 Query: 87 IKK 89 I + Sbjct: 60 IHR 62 >gi|209946176|gb|ACI97319.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|194014177|ref|ZP_03052794.1| YhaN [Bacillus pumilus ATCC 7061] gi|194013203|gb|EDW22768.1| YhaN [Bacillus pumilus ATCC 7061] Length = 929 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + I+HF F+ F+D +V G N GK++L IE + +G+ + + + Sbjct: 1 MKIRSLHIAHFGKFSNRT-FHFSDDGFQLVYGLNESGKTTLKTFIESMLFGFPKNKMYK 58 >gi|220926952|ref|YP_002502254.1| DNA repair ATPase-like protein [Methylobacterium nodulans ORS 2060] gi|219951559|gb|ACL61951.1| ATPase involved in DNA repair-like protein [Methylobacterium nodulans ORS 2060] Length = 648 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I ++ +GF + + + + G N GKS++ A+ +FYG + Sbjct: 228 IRLTDVQGFADAT-LPLGPGVNALVGPNNRGKSTVIRALRAVFYGEARDGL 277 >gi|78045777|ref|YP_361952.1| hypothetical protein XCV0221 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034207|emb|CAJ21852.1| hypothetical protein XCV0221 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 169 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F + + F D L I+ G N GKSS+ +AI+ + Sbjct: 4 IERLILKNFKKFRDFD-VSFDDKLNILAGGNEAGKSSILQAIDLALSSSRSK 54 >gi|226377771|ref|YP_002790820.1| putative exonuclease [Lactobacillus phage Lb338-1] gi|225921549|gb|ACO37062.1| putative exonuclease [Lactobacillus phage Lb338-1] Length = 621 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNG---------QNGYGKSSLSEAIEWLFYG 76 + KL + + +F + + + LT+++G NG GK+SL +I + YG Sbjct: 1 MIKLKKVILHNFLSYKDAELPLENQGLTLISGINNSSNNYVSNGSGKTSLLNSITYAIYG 60 Query: 77 YTQRRKHGDSI--KKRSIKTPMPMCMAVPRCKYQLK 110 T GD++ K+ + + V YQ++ Sbjct: 61 QTIDGLSGDAVINKEVGTDCSVILDFYVGSTSYQIQ 96 >gi|209946204|gb|ACI97333.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|209946202|gb|ACI97332.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTG 31 >gi|168181360|ref|ZP_02616024.1| acyl-coA dehydrogenase [Clostridium botulinum Bf] gi|182675483|gb|EDT87444.1| acyl-coA dehydrogenase [Clostridium botulinum Bf] Length = 645 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++ I +F+G ++ ++F T + G NG GK+++ ++ +L + + Sbjct: 5 IFLKNLSIKNFKGIKDLN-LDFGKA-TNIFGDNGTGKTTVQDSFTFLLFDKDSK 56 >gi|163782382|ref|ZP_02177380.1| recombination protein RecN [Hydrogenivirga sp. 128-5-R1-1] gi|159882415|gb|EDP75921.1| recombination protein RecN [Hydrogenivirga sp. 128-5-R1-1] Length = 522 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F +++ IEF++ L I++G+ G GKS A+E++ Sbjct: 2 LRRVSIENFILIKDLE-IEFSEGLNIISGETGTGKSMTISALEFVMG 47 >gi|157826419|ref|YP_001495483.1| recombination protein F [Rickettsia bellii OSU 85-389] gi|226737824|sp|A8GUF0|RECF_RICB8 RecName: Full=DNA replication and repair protein recF gi|157801723|gb|ABV78446.1| recombination protein F [Rickettsia bellii OSU 85-389] Length = 360 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R F ++ +TI+ G+NG GK+++ EAI + G R Sbjct: 4 IFLHSLIVENYRNFKNLELKTDNIPITII-GENGSGKTNILEAISLFYPGRGLRSARLAD 62 Query: 87 IKKRSIK 93 I + S Sbjct: 63 ICRESED 69 >gi|322506544|gb|ADX01998.1| Recombination and DNA repair protein [Acinetobacter baumannii 1656-2] Length = 559 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 F L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 4 FMLTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 54 >gi|317009014|gb|ADU79594.1| hypothetical protein HPIN_01700 [Helicobacter pylori India7] Length = 394 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L E + + G Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEVL-YCLVG 47 >gi|307945427|ref|ZP_07660763.1| molybdate ABC transporter, ATP-binding protein [Roseibium sp. TrichSKD4] gi|307771300|gb|EFO30525.1| molybdate ABC transporter, ATP-binding protein [Roseibium sp. TrichSKD4] Length = 360 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 30 LDIEISH-FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L + +SH F F+ + E +T++ G++G GK+++ A+ L Sbjct: 3 LSVRLSHDFGSFSLKAEFEAPSGITVLYGRSGSGKTTIINAVAGLL 48 >gi|295092887|emb|CBK81978.1| hypothetical protein [Coprococcus sp. ART55/1] Length = 557 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L+ I F G +++F D + NG+GKS+L+ I + YG+ K D Sbjct: 1 MRLISCYIDGF-GKLNNMEVQFEDGINTFVQDNGWGKSTLAAFIRVMLYGFDGETKRND 58 >gi|291566851|dbj|BAI89123.1| ABC transporter ATP-binding protein [Arthrospira platensis NIES-39] Length = 382 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + ++R F +++ D + + G N GKS+ +A +L Sbjct: 3 ISHIILKNWRNFRA-VEVDLCDRI-FIVGPNACGKSNFLDAFRFL 45 >gi|294669574|ref|ZP_06734641.1| hypothetical protein NEIELOOT_01475 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308487|gb|EFE49730.1| hypothetical protein NEIELOOT_01475 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 241 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 T + R L ++ D + EI +++ +T++ G NG GKS+L A+ Sbjct: 3 TLFQIRNLSVRVQD------KTLLEIDQLDIPSGMTVIIGPNGAGKSTLLRAL 49 >gi|262164215|ref|ZP_06031953.1| ATP-dependent endonuclease [Vibrio mimicus VM223] gi|262026595|gb|EEY45262.1| ATP-dependent endonuclease [Vibrio mimicus VM223] Length = 543 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + G + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVLPADGTLYQFALQ 58 Query: 85 DSIKKRSIKTPMPMCMAV 102 D SI P + + Sbjct: 59 DFHVDYSIADPQTQNLQI 76 >gi|262173725|ref|ZP_06041402.1| ATP-dependent endonuclease [Vibrio mimicus MB-451] gi|261891083|gb|EEY37070.1| ATP-dependent endonuclease [Vibrio mimicus MB-451] Length = 543 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + G + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVLPADGTLYQFALQ 58 Query: 85 DSIKKRSIKTPMPMCMAV 102 D SI P + + Sbjct: 59 DFHVDYSIADPQTQNLQI 76 >gi|258623465|ref|ZP_05718468.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258584280|gb|EEW09026.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 543 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF--YGYTQRRKHG 84 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + G + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVLPADGTLYQFALQ 58 Query: 85 DSIKKRSIKTPMPMCMAV 102 D SI P + + Sbjct: 59 DFHVDYSIADPQTQNLQI 76 >gi|261380908|ref|ZP_05985481.1| ferrichrome transport ATP-binding protein FhuC [Neisseria subflava NJ9703] gi|284796157|gb|EFC51504.1| ferrichrome transport ATP-binding protein FhuC [Neisseria subflava NJ9703] Length = 241 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 T + R L ++ D + EI +++ +T++ G NG GKS+L A+ Sbjct: 3 TLFQIRNLSVRVQD------KTLLEIDQLDIPSGMTVIIGPNGAGKSTLLRAL 49 >gi|261418515|ref|YP_003252197.1| ABC transporter [Geobacillus sp. Y412MC61] gi|319765329|ref|YP_004130830.1| ABC transporter [Geobacillus sp. Y412MC52] gi|261374972|gb|ACX77715.1| ABC transporter related protein [Geobacillus sp. Y412MC61] gi|317110195|gb|ADU92687.1| ABC transporter related protein [Geobacillus sp. Y412MC52] Length = 263 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 + YA++L + D R E + D +T + G NG GKS+L + + + Sbjct: 1 MARLYAKELTVRYDD------RTIFERLSVRIPDRQITAIIGPNGCGKSTLLKTLTRIIS 54 Query: 76 GYTQRRKHGDSIKKRSIKTPMPMCMAV 102 + + + MA+ Sbjct: 55 PQSGAVILDGQAISQQPTKELAKKMAI 81 >gi|209527443|ref|ZP_03275948.1| SMC domain protein [Arthrospira maxima CS-328] gi|209492116|gb|EDZ92466.1| SMC domain protein [Arthrospira maxima CS-328] Length = 382 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + ++R F +++ D + + G N GKS+ +A +L Sbjct: 3 ISHIILKNWRNFRA-VEVDLCDRI-FIVGPNACGKSNFLDAFRFL 45 >gi|295837141|ref|ZP_06824074.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197699487|gb|EDY46420.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 404 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 F L + + H+R E +E L ++ G NG GKS+ +A Sbjct: 6 FSLTRVRLKHYRSIAE-ADVELGR-LLLLVGPNGSGKSNFLDA 46 >gi|169828966|ref|YP_001699124.1| DNA repair protein recN (recombination protein N) [Lysinibacillus sphaericus C3-41] gi|168993454|gb|ACA40994.1| DNA repair protein recN (Recombination protein N) [Lysinibacillus sphaericus C3-41] Length = 563 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F++ LT++ G+ G GKS + +A+ L G R + + I+ Sbjct: 2 LRELSIRNF-AIIEDLTVSFSEGLTVLTGETGAGKSIIIDAVHLLAGG----RGNTEFIR 56 Query: 89 KRSIKTPM 96 + K + Sbjct: 57 HGARKAEL 64 >gi|126653069|ref|ZP_01725204.1| DNA repair protein [Bacillus sp. B14905] gi|126590170|gb|EAZ84294.1| DNA repair protein [Bacillus sp. B14905] Length = 563 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F++ LT++ G+ G GKS + +A+ L G R + + I+ Sbjct: 2 LRELSIRNF-AIIEDLTVSFSEGLTVLTGETGAGKSIIIDAVHLLAGG----RGNTEFIR 56 Query: 89 KRSIKTPM 96 + K + Sbjct: 57 HGARKAEL 64 >gi|126640403|ref|YP_001083387.1| recombination and DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 559 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 F L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 4 FMLTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 54 >gi|89891571|ref|ZP_01203075.1| DNA replication and repair protein RecF [Flavobacteria bacterium BBFL7] gi|89516118|gb|EAS18781.1| DNA replication and repair protein RecF [Flavobacteria bacterium BBFL7] Length = 359 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F+ + E + + G NG GK+++ +AI L + + Sbjct: 1 MHLDFLSLVNYKSFSSAE-FELDEKINCFVGNNGVGKTNVLDAIYHLAFAKS 51 >gi|311993043|ref|YP_004009909.1| gp46 recombination endonuclease subunit [Enterobacteria phage CC31] gi|284177881|gb|ADB81547.1| gp46 recombination endonuclease subunit [Enterobacteria phage CC31] Length = 562 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTE-IQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 IFKL ++ + I+ H T++ G+NG GKS++ EAI + +G R Sbjct: 3 IFKLNRVKYQNIMSVGGQPIDIQLDKVHKTLITGKNGAGKSTMLEAITFALFGKPFRDFK 62 Query: 84 GDSIKKRSIK 93 + + K Sbjct: 63 KGQLINSTNK 72 >gi|262277740|ref|ZP_06055533.1| putative DNA replication and repair protein RecF [alpha proteobacterium HIMB114] gi|262224843|gb|EEY75302.1| putative DNA replication and repair protein RecF [alpha proteobacterium HIMB114] Length = 363 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 29 LLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I I +F+ + +I I+ G NG GK++L E++ + + GD++ Sbjct: 4 VTKINIKNFKSHKQYNLEISKDYQHIIIYGDNGVGKTNLIESLSFF---SNSKGLRGDTL 60 Query: 88 KKRSIKTP 95 K + Sbjct: 61 DKLLPEQE 68 >gi|183599795|ref|ZP_02961288.1| hypothetical protein PROSTU_03303 [Providencia stuartii ATCC 25827] gi|188022059|gb|EDU60099.1| hypothetical protein PROSTU_03303 [Providencia stuartii ATCC 25827] Length = 553 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 7/71 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I++F +++ I+F +T + G+ G GKS +A+ GD+ Sbjct: 2 LTQLTINNFAIVRDLE-IDFRSGMTTITGETGAGKSIAIDALGLCLGS------RGDANM 54 Query: 89 KRSIKTPMPMC 99 R +C Sbjct: 55 VRPGAQRADLC 65 >gi|3002803|gb|AAC39308.1| DNase subunit [Enterobacteria phage RB69] Length = 558 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R I + K + + M KY +K Sbjct: 28 TLITGKNGGGKSTMLEAITFGLFGKPFRDVKKGQIINSTNKKELLVELWMEFDDKKYFIK 87 >gi|317012208|gb|ADU82816.1| hypothetical protein HPLT_01900 [Helicobacter pylori Lithuania75] Length = 394 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L E + + G Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEVL-YCLVG 47 >gi|313899179|ref|ZP_07832699.1| putative ABC transporter, ATP-binding protein [Clostridium sp. HGF2] gi|312956002|gb|EFR37650.1| putative ABC transporter, ATP-binding protein [Clostridium sp. HGF2] Length = 237 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 10/74 (13%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV-- 102 ++ F +T G+NG GKS+L EAI + YG+ + + + T + + Sbjct: 31 RLAFQKQITFFTGENGSGKSTLLEAIA-VAYGFNPEGGTKNY-RFYTKDTHSSLHEGIHL 88 Query: 103 ------PRCKYQLK 110 P C Y L+ Sbjct: 89 SRGFCQPSCSYFLR 102 >gi|312170948|emb|CBX79207.1| Structural maintenance of chromosomes protein 3 [Erwinia amylovora ATCC BAA-2158] Length = 666 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F+ I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLRNFRVFSGTHTIDLAPRKRLHDENPRPIVLFGGLNGAGKTSILSAIRLALYG 60 >gi|300114988|ref|YP_003761563.1| SMC domain-containing protein [Nitrosococcus watsonii C-113] gi|299540925|gb|ADJ29242.1| SMC domain protein [Nitrosococcus watsonii C-113] Length = 821 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT----IVNGQNGYGKSSLSEAIEWLF 74 + +++ FR + + Q ++ T V N GKSSL +A E+ F Sbjct: 6 ITIEALKVEGFRAYLQPQTLDLYRGKTPLSLAVFAPNAKGKSSLVDAFEFYF 57 >gi|292486878|ref|YP_003529748.1| structural maintenance of chromosomes protein 3 [Erwinia amylovora CFBP1430] gi|292900725|ref|YP_003540094.1| DNA-binding protein [Erwinia amylovora ATCC 49946] gi|291200573|emb|CBJ47704.1| putative DNA-binding protein [Erwinia amylovora ATCC 49946] gi|291552295|emb|CBA19332.1| Structural maintenance of chromosomes protein 3 [Erwinia amylovora CFBP1430] Length = 666 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F+ I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLRNFRVFSGTHTIDLAPRKRLHDENPRPIVLFGGLNGAGKTSILSAIRLALYG 60 >gi|317051173|ref|YP_004112289.1| SMC domain-containing protein [Desulfurispirillum indicum S5] gi|316946257|gb|ADU65733.1| SMC domain protein [Desulfurispirillum indicum S5] Length = 396 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I I +F+ F + + +V G NG GKS+L + +L Sbjct: 1 MLIESIRIKNFKSFRNAEMKKLPR-FCVVVGANGSGKSTLFDVFGFL 46 >gi|119472127|ref|ZP_01614358.1| hypothetical protein ATW7_11125 [Alteromonadales bacterium TW-7] gi|119445147|gb|EAW26440.1| hypothetical protein ATW7_11125 [Alteromonadales bacterium TW-7] Length = 663 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 +L + +FR + I + LT + G+N GKS+L A++ Sbjct: 1 MRLQSFRVKNFRSINDTGLIS-TEQLTAILGRNESGKSNLLLALQ 44 >gi|91204849|ref|YP_537204.1| recombination protein F [Rickettsia bellii RML369-C] gi|122426139|sp|Q1RKJ9|RECF_RICBR RecName: Full=DNA replication and repair protein recF gi|91068393|gb|ABE04115.1| DNA replication and repair protein RecF [Rickettsia bellii RML369-C] Length = 360 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R F ++ +TI+ G+NG GK+++ EAI + G R Sbjct: 4 IFLHSLIVENYRNFKNLELKTDNIPITII-GENGSGKTNILEAISLFYPGRGLRSARLAD 62 Query: 87 IKKRSIK 93 I + S Sbjct: 63 ICRESED 69 >gi|90577753|ref|ZP_01233564.1| hypothetical ATP-dependent endonuclease of the OLD family protein [Vibrio angustum S14] gi|90440839|gb|EAS66019.1| hypothetical ATP-dependent endonuclease of the OLD family protein [Vibrio angustum S14] Length = 552 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L IEIS FRG + + F + LT++ G+N +GKSSL +A+ Sbjct: 1 MHLERIEISGFRGI-KRLSLSFKE-LTVLIGENAWGKSSLLDAL 42 >gi|88602370|ref|YP_502548.1| hypothetical protein Mhun_1080 [Methanospirillum hungatei JF-1] gi|88187832|gb|ABD40829.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 369 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWL 73 KL +I I F+ + ++ +HLT+ G NG GKS+L A +L Sbjct: 1 MKLKNICIKGFKSL---EYVDLPLNHLTVCIGANGSGKSNLLSAFYFL 45 >gi|38639947|ref|NP_943902.1| gp46 recombination endonuclease subunit [Aeromonas phage Aeh1] gi|33414636|gb|AAQ17679.1| gp46 recombination endonuclease subunit [Aeromonas phage Aeh1] Length = 772 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 20/41 (48%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 T+V G NG GKS+ EA+ +L YG R + K Sbjct: 31 TLVTGTNGAGKSTFIEALTFLLYGKAFRDVTKAQLVNSQNK 71 >gi|66391506|ref|YP_239031.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB43] gi|62288594|gb|AAX78577.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB43] Length = 567 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T++ G+NG GKS+L EA+ + +G + R Sbjct: 31 TLITGKNGGGKSTLIEALTYALFGKSFRDLK 61 >gi|50287189|ref|XP_446024.1| hypothetical protein [Candida glabrata CBS 138] gi|49525331|emb|CAG58948.1| unnamed protein product [Candida glabrata] Length = 1105 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG---YTQRRKHGD 85 ++ I + +F + + + L ++ G NG GKS+ A+ G Y R K + Sbjct: 38 IVKIRLENFVTYN-YTEFNLSPSLNMIIGPNGSGKSTYVCAVCLGLAGKPEYIGRSKQVE 96 Query: 86 SIKKRSIKTPM 96 K T Sbjct: 97 DFIKNGQDTSK 107 >gi|300310633|ref|YP_003774725.1| SMC domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300073418|gb|ADJ62817.1| SMC domain protein [Herbaspirillum seropedicae SmR1] Length = 937 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ + + + + + + G NG GK++L +A+ L + R + Sbjct: 1 MFHLQSLELLQW-DYCQRLTLPLDGSIITIAGPNGSGKTTLLDAMRTLLGLECSGGRSYK 59 Query: 85 DSIKKRSIKT 94 + + T Sbjct: 60 TYARHANADT 69 >gi|266620372|ref|ZP_06113307.1| DNA repair protein RecN [Clostridium hathewayi DSM 13479] gi|288868029|gb|EFD00328.1| DNA repair protein RecN [Clostridium hathewayi DSM 13479] Length = 554 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + + E IEF + L I+ G+ G GKS + ++ G Q+ + Sbjct: 2 LSELHVKNL-ALIEKADIEFGEGLNILTGETGAGKSIIIGSVTMALGGKVQK-----DMI 55 Query: 89 KRSIK 93 +R + Sbjct: 56 RRGTE 60 >gi|323342594|ref|ZP_08082826.1| ABC superfamily ATP binding cassette transporter, ABC protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463706|gb|EFY08900.1| ABC superfamily ATP binding cassette transporter, ABC protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 284 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 11/90 (12%) Query: 25 LIFKLLDIEISHFRGFTEIQK------IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +I L +E+ + K + + + + G NG GKS+L + + L + Sbjct: 1 MIILLNRLEVRNLNKAYGATKAVNNLSFDMENGIYGLVGHNGAGKSTLIKILATLMKADS 60 Query: 79 QR-----RKHGDSIKKRSIKTPMPMCMAVP 103 D RS+ MP ++P Sbjct: 61 GTVSFNGELIKDYTVFRSLLGYMPQNQSLP 90 >gi|257789840|ref|YP_003180446.1| putative ATP-binding protein [Eggerthella lenta DSM 2243] gi|257473737|gb|ACV54057.1| putative ATP-binding protein [Eggerthella lenta DSM 2243] Length = 1136 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 28/56 (50%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L ++++++ F Q + ++ G +G GKS++ +A+ + TQ + Sbjct: 18 RLARVDMANWGTFNGFQSLPVDRRGLLITGPSGSGKSTVLDAVAAVLTPPTQLSLN 73 >gi|159900239|ref|YP_001546486.1| DNA replication and repair protein RecF [Herpetosiphon aurantiacus ATCC 23779] gi|226737805|sp|A9B775|RECF_HERA2 RecName: Full=DNA replication and repair protein recF gi|159893278|gb|ABX06358.1| DNA replication and repair protein RecF [Herpetosiphon aurantiacus ATCC 23779] Length = 385 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +++ FR + + + + + G N GK+++ EA+ +L + R Sbjct: 1 MYVSRLQLQDFRIYRSLN-LALPPGVCLFYGANAAGKTTILEALYYLATTRSLR 53 >gi|154503984|ref|ZP_02041044.1| hypothetical protein RUMGNA_01810 [Ruminococcus gnavus ATCC 29149] gi|153795411|gb|EDN77831.1| hypothetical protein RUMGNA_01810 [Ruminococcus gnavus ATCC 29149] Length = 402 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 21/76 (27%) Query: 29 LLDIEISHFRGFTEIQKIE--------FADHL------------TIVNGQNGYGKSSLSE 68 L +F+ + + + F D+L +++ G NG GK++L Sbjct: 2 LCQFSFQNFKSYRDETVFDLQATAIPEFKDNLIVKDKCSDLLPVSVIYGPNGGGKTNLIR 61 Query: 69 AIEWLFYGYTQRRKHG 84 A+ R H Sbjct: 62 ALS-CLITTVVRPIHD 76 >gi|33598009|ref|NP_885652.1| DNA repair protein [Bordetella parapertussis 12822] gi|33574438|emb|CAE38776.1| DNA repair protein [Bordetella parapertussis] Length = 553 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E ++ F D T+ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTELHFGDGFTVFSGETGAGKSILIDALALTLGE 48 >gi|33593489|ref|NP_881133.1| DNA repair protein [Bordetella pertussis Tohama I] gi|33572845|emb|CAE42778.1| DNA repair protein [Bordetella pertussis Tohama I] gi|332382897|gb|AEE67744.1| DNA repair protein [Bordetella pertussis CS] Length = 553 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E ++ F D T+ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTELHFGDGFTVFSGETGAGKSILIDALALTLGE 48 >gi|33602915|ref|NP_890475.1| DNA repair protein [Bordetella bronchiseptica RB50] gi|33568546|emb|CAE34304.1| DNA repair protein [Bordetella bronchiseptica RB50] Length = 553 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E ++ F D T+ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTELHFGDGFTVFSGETGAGKSILIDALALTLGE 48 >gi|329114522|ref|ZP_08243281.1| Hypothetical protein APO_1316 [Acetobacter pomorum DM001] gi|326696002|gb|EGE47684.1| Hypothetical protein APO_1316 [Acetobacter pomorum DM001] Length = 901 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY---GYTQRRKHG 84 L DI++ R FT ++E D L ++ N GKS+L A+ G + Sbjct: 3 LTDIQLECVRRFTSPVRLEGLGDGLNVLAAPNEAGKSTLLMALRAALTLRHGSKAQSVKD 62 >gi|284053287|ref|ZP_06383497.1| hypothetical protein AplaP_17624 [Arthrospira platensis str. Paraca] gi|291571575|dbj|BAI93847.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 170 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +IE+ F+ + + LT++ G N GKS++ EA+ L T R Sbjct: 2 ITEIELKDFKSYKSAT-LHLGR-LTVLIGANASGKSNVIEALRLLSRLATGERL 53 >gi|225850428|ref|YP_002730662.1| DNA repair protein RecN [Persephonella marina EX-H1] gi|225645150|gb|ACO03336.1| DNA repair protein RecN [Persephonella marina EX-H1] Length = 543 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I I F + E I+ + L + G+ G GKS + +A+E++ Sbjct: 14 LTQINIKKFL-YMEDISIDLDEGLNVFTGETGVGKSLIIDAVEFVLG 59 >gi|188989399|ref|YP_001901409.1| recombination protein F [Xanthomonas campestris pv. campestris str. B100] gi|167731159|emb|CAP49331.1| DNA replication and repair protein [Xanthomonas campestris pv. campestris] Length = 397 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + +EF L ++ G NG GK+S+ EA+ + YG + R + Sbjct: 24 MHVARLSIHRLRRF---EAVEFHPASTLNLLTGDNGAGKTSVLEALHVMAYGRSFRGRVR 80 Query: 85 DSIKKRS 91 D + ++ Sbjct: 81 DGLIRQG 87 >gi|145512287|ref|XP_001442060.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409332|emb|CAK74663.1| unnamed protein product [Paramecium tetraurelia] Length = 1237 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R + Q I F LT++ G NG GK+++ EA+ + G Sbjct: 27 RAAQQSQSIYFKQPLTLIWGHNGSGKTTIIEALRTITTG 65 >gi|21229481|ref|NP_635398.1| recombination protein F [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766355|ref|YP_241117.1| recombination protein F [Xanthomonas campestris pv. campestris str. 8004] gi|25453248|sp|Q8PEH3|RECF_XANCP RecName: Full=DNA replication and repair protein recF gi|81307651|sp|Q4V0S6|RECF_XANC8 RecName: Full=DNA replication and repair protein recF gi|21110941|gb|AAM39322.1| DNA replication and repair RecF protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571687|gb|AAY47097.1| DNA replication and repair RecF protein [Xanthomonas campestris pv. campestris str. 8004] Length = 368 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + + I R F + +EF L ++ G NG GK+S+ EA+ + YG + R + Sbjct: 1 MHVARLSIHRLRRF---EAVEFHPASTLNLLTGDNGAGKTSVLEALHVMAYGRSFRGRVR 57 Query: 85 DSIKKRS 91 D + ++ Sbjct: 58 DGLIRQG 64 >gi|117928029|ref|YP_872580.1| SMC domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648492|gb|ABK52594.1| SMC domain protein [Acidothermus cellulolyticus 11B] Length = 917 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L + +R ++ +EF T++ G N GKS+L EAI + Sbjct: 1 MRLDSATVRRYRLHRDLT-VEFDPSRTLITGDNETGKSTLVEAIHRALF 48 >gi|116512159|ref|YP_809375.1| ATPase for DNA repair [Lactococcus lactis subsp. cremoris SK11] gi|116107813|gb|ABJ72953.1| ATPase for DNA repair [Lactococcus lactis subsp. cremoris SK11] Length = 1046 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K +E+++F E ++F + +++G G GKS++ +A+ + +G T Sbjct: 1 MKPTYLEMNYFGPH-EKSIVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTT-GD 58 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 + TP + V Sbjct: 59 RDAKKMRSQFATPDNLTSVV 78 >gi|329576834|gb|EGG58319.1| hypothetical protein HMPREF9520_01293 [Enterococcus faecalis TX1467] Length = 903 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KLL +EI F G + QKI F ++ G N GKS+L + I+ + +G+ + K Sbjct: 1 MKLLAVEIVGF-GKWQQQKITFESGNHLLYGANEVGKSTLYQFIQAMLFGFPTKGKRK 57 >gi|310825413|ref|YP_003957771.1| hypothetical protein STAUR_8189 [Stigmatella aurantiaca DW4/3-1] gi|309398485|gb|ADO75944.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWL 73 + I + ++R F + ++ + + G N GKS+ +AI +L Sbjct: 1 MRFTRIRLENWRNFLD---VDVPLESRVFLVGPNASGKSNFLDAIRFL 45 >gi|306815655|ref|ZP_07449804.1| SMC domain-containing protein [Escherichia coli NC101] gi|305851317|gb|EFM51772.1| SMC domain-containing protein [Escherichia coli NC101] Length = 570 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 R+ ++ +++ FR F + I F + T++ G N GKS++ ++ L Sbjct: 3 REFKLEISSLKLKGFRNFKD-AFINFNYN-TLIIGSNDIGKSNMLHSLRILLD 53 >gi|303240002|ref|ZP_07326524.1| SMC domain protein [Acetivibrio cellulolyticus CD2] gi|302592481|gb|EFL62207.1| SMC domain protein [Acetivibrio cellulolyticus CD2] Length = 247 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 9/78 (11%) Query: 21 YARKLIFKLLDIEISHFRGFT-----EIQKIEFADHLTIVNGQNGYGKSSLSEAIE---- 71 Y +++ K ++ + F + +E ++T + G+NG GKS+ EAI Sbjct: 3 YLKRITIKWEKVDNKNCYPFNIPSINGLNSLEITKNVTFLVGENGSGKSTFLEAIAQNCG 62 Query: 72 WLFYGYTQRRKHGDSIKK 89 + G ++ D + Sbjct: 63 FSVKGGSRNSLLSDEVDD 80 >gi|302521503|ref|ZP_07273845.1| SMC domain-containing protein [Streptomyces sp. SPB78] gi|302430398|gb|EFL02214.1| SMC domain-containing protein [Streptomyces sp. SPB78] Length = 375 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++ I +S ++ E + +T++ G NG GKS+L EA+E Sbjct: 4 RVRRIAVSGYKSIHEAELA--LTPVTLLVGPNGAGKSNLIEAVE 45 >gi|254565571|ref|XP_002489896.1| Structural maintenance of chromosomes (SMC) protein [Pichia pastoris GS115] gi|238029692|emb|CAY67615.1| Structural maintenance of chromosomes (SMC) protein [Pichia pastoris GS115] gi|328350307|emb|CCA36707.1| Structural maintenance of chromosomes protein 5 [Pichia pastoris CBS 7435] Length = 1098 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ + + +F+ T + + + L + G NG GKSS A+ G Sbjct: 35 IIRLRVKNFQN-TGLSEFQLNPRLNFIVGPNGSGKSSFVNAVCLGLGG 81 >gi|223986237|ref|ZP_03636253.1| hypothetical protein HOLDEFILI_03563 [Holdemania filiformis DSM 12042] gi|223961800|gb|EEF66296.1| hypothetical protein HOLDEFILI_03563 [Holdemania filiformis DSM 12042] Length = 246 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMC 99 F Q + F LT + G NG GKS+L EAI + + + + +T + Sbjct: 32 FQHFQPLTFHKPLTFITGDNGTGKSTLIEAIAVGMGFNPEGGTR--NFQFSTRETHSSLY 89 Query: 100 MA------VPRCK 106 A V RC+ Sbjct: 90 QALTLAKGVRRCR 102 >gi|295836880|ref|ZP_06823813.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197699113|gb|EDY46046.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 375 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++ I +S ++ E + +T++ G NG GKS+L EA+E Sbjct: 4 RVRRIAVSGYKSIHEAELA--LTPVTLLVGPNGAGKSNLIEAVE 45 >gi|323705308|ref|ZP_08116883.1| DNA repair protein RecN [Thermoanaerobacterium xylanolyticum LX-11] gi|323535210|gb|EGB24986.1| DNA repair protein RecN [Thermoanaerobacterium xylanolyticum LX-11] Length = 568 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L + I + + +I+F D L I+ G+ G GKS + +++ L G R + D I+ Sbjct: 2 ILTLNIKNI-ALIDEAEIDFDDGLNILTGETGAGKSIVIDSMMLLLGG----RANKDIIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 NGAQKATVE 65 >gi|315658205|ref|ZP_07911077.1| DNA repair protein RecN [Staphylococcus lugdunensis M23590] gi|315496534|gb|EFU84857.1| DNA repair protein RecN [Staphylococcus lugdunensis M23590] Length = 559 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L ++ I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQNLSIKQF-AIIDELEIQFSDGLTVLSGETGAGKSIIIDAI 42 >gi|289550709|ref|YP_003471613.1| DNA repair protein RecN [Staphylococcus lugdunensis HKU09-01] gi|289180241|gb|ADC87486.1| DNA repair protein RecN [Staphylococcus lugdunensis HKU09-01] Length = 559 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L ++ I F + +I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQNLSIKQF-AIIDELEIQFSDGLTVLSGETGAGKSIIIDAI 42 >gi|221120167|ref|XP_002165197.1| PREDICTED: similar to SMC5 protein, partial [Hydra magnipapillata] Length = 591 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++ +++ +F + + + ++L +V G NG GKSS+ AI Sbjct: 283 RIVRLKLKNFLTYDDCEFFP-GENLNVVLGPNGTGKSSIVCAI 324 >gi|17534363|ref|NP_496476.1| hypothetical protein F54D5.14 [Caenorhabditis elegans] gi|3875345|emb|CAB16920.1| C. elegans protein F54D5.14, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|3877518|emb|CAA91339.1| C. elegans protein F54D5.14, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1130 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +++++F +Q I+F ++ + G NG GKS+L AI G G Sbjct: 27 RVASVKLTNFMCHANLQ-IDFKTAQNNCFYIGGPNGSGKSALFAAINLGLGGRGSDNDRG 85 Query: 85 DSIK 88 +++K Sbjct: 86 NTVK 89 >gi|49481917|gb|AAT66670.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A7] Length = 573 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSVSFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|49481903|gb|AAT66663.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSVSFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|49481913|gb|AAT66668.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A62] Length = 573 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSVSFEKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|331083866|ref|ZP_08332975.1| hypothetical protein HMPREF0992_01899 [Lachnospiraceae bacterium 6_1_63FAA] gi|330403291|gb|EGG82851.1| hypothetical protein HMPREF0992_01899 [Lachnospiraceae bacterium 6_1_63FAA] Length = 242 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ +EF ++T G+NG GKS+L EAI + YG+ + Sbjct: 23 LRNISVLRNLKHLEFNSNITFFAGENGSGKSTLLEAIA-VAYGFNPEGGTKNY 74 >gi|308509930|ref|XP_003117148.1| CRE-SMC-6 protein [Caenorhabditis remanei] gi|308242062|gb|EFO86014.1| CRE-SMC-6 protein [Caenorhabditis remanei] Length = 1169 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 8 NTCACLSKSLTSYYARKLIF-KLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGK 63 NT AC +K R + ++ + + +F ++ I+F ++ + G NG GK Sbjct: 43 NTSACPAKKPRLVEGRIAVSGRVASVRLINFMCHANLE-IDFNTKENNCFYIGGPNGSGK 101 Query: 64 SSLSEAIEWLFYGYTQRRKHGDSIK 88 S+L AI G G+++K Sbjct: 102 SALFAAINLGLGGRGSDNDRGNTVK 126 >gi|301161961|emb|CBW21505.1| putative DNA replication and repair protein [Bacteroides fragilis 638R] Length = 370 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELNFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSAGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|241894937|ref|ZP_04782233.1| DNA repair and genetic recombination protein [Weissella paramesenteroides ATCC 33313] gi|241871655|gb|EER75406.1| DNA repair and genetic recombination protein [Weissella paramesenteroides ATCC 33313] Length = 563 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F I F +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSIQNF-AIIPKLNISFEPGMTVLTGETGAGKSIIIDAVGLLTGG----RGSQDYIR 56 Query: 89 K 89 + Sbjct: 57 E 57 >gi|260587864|ref|ZP_05853777.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583] gi|260542129|gb|EEX22698.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583] Length = 242 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + ++ +EF ++T G+NG GKS+L EAI + YG+ + Sbjct: 23 LRNISVLRNLKHLEFNSNITFFAGENGSGKSTLLEAIA-VAYGFNPEGGTKNY 74 >gi|218441738|ref|YP_002380067.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 7424] gi|218174466|gb|ACK73199.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 7424] Length = 668 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + +F + I + + G NG GK++L +AI YG + Sbjct: 4 TELILENFGPYAGKHIINLRPEIEENTRPIILFGGMNGGGKTTLMDAIRLALYGSRAQ 61 >gi|156839518|ref|XP_001643449.1| hypothetical protein Kpol_483p10 [Vanderwaltozyma polyspora DSM 70294] gi|156114060|gb|EDO15591.1| hypothetical protein Kpol_483p10 [Vanderwaltozyma polyspora DSM 70294] Length = 1118 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E +E +L + G NG GKS++ AI G S+ Sbjct: 72 YIRKVILRNFMCH-ENFSVELTPNLNFIVGNNGSGKSAILTAIIVALGVKASETSRGSSL 130 Query: 88 KKR 90 K+ Sbjct: 131 KEL 133 >gi|121611086|ref|YP_998893.1| hypothetical protein Veis_4170 [Verminephrobacter eiseniae EF01-2] gi|121555726|gb|ABM59875.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 399 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ I I ++R F + K+E L ++ G NG GKS+L + +L + Sbjct: 1 MQIESIAIKNYRLFRD-AKLENIPRLCVLVGANGTGKSTLFDVFSFLKDALS 51 >gi|32453547|ref|NP_861753.1| endonuclease subunit [Enterobacteria phage RB69] gi|116241358|sp|O64299|EXO2_BPR69 RecName: Full=Exonuclease subunit 2; AltName: Full=Protein Gp46 gi|32350366|gb|AAP75965.1| gp46 recombination endonuclease subunit [Enterobacteria phage RB69] Length = 562 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM--PMCMAVPRCKYQLK 110 T++ G+NG GKS++ EAI + +G R I + K + + M KY +K Sbjct: 32 TLITGKNGGGKSTMLEAITFGLFGKPFRDVKKGQIINSTNKKELLVELWMEFDDKKYFIK 91 >gi|328945555|gb|EGG39706.1| DNA repair protein RecN [Streptococcus sanguinis SK1087] Length = 552 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 LL+I I +F E + F +T++ G+ G GKS + +A+ + + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLGSRS 50 >gi|261839218|gb|ACX98983.1| hypothetical protein HPKB_0374 [Helicobacter pylori 52] Length = 394 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + I +F+ F + I+ L I+ G+N GKS+L E + + G Sbjct: 2 IQSVRIKNFKNFKD-TTIDGFTKLNIITGENNAGKSNLLEVL-YCLVG 47 >gi|257084267|ref|ZP_05578628.1| ABC-type cobalt transport system [Enterococcus faecalis Fly1] gi|256992297|gb|EEU79599.1| ABC-type cobalt transport system [Enterococcus faecalis Fly1] Length = 452 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 17 LTSYYARKLIFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 LT+ ++ + +L + +S R E ++ F +T + G NG GKS+L +AI Sbjct: 231 LTNSVVKQPMLQLKNFRLSQGKRVLIEEKEALFFKGITTLTGPNGAGKSTLLKAI 285 >gi|46128649|ref|XP_388878.1| hypothetical protein FG08702.1 [Gibberella zeae PH-1] Length = 1087 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 ++ + + +F + E + HL +V G NG GKSSL AI GY+ + Sbjct: 71 IVRVTVENFVTY-EKAEFLPGPHLNMVVGPNGTGKSSLVCAI--CLGLGYSPKHL 122 >gi|326382063|ref|ZP_08203756.1| hypothetical protein SCNU_03927 [Gordonia neofelifaecis NRRL B-59395] gi|326199489|gb|EGD56670.1| hypothetical protein SCNU_03927 [Gordonia neofelifaecis NRRL B-59395] Length = 861 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +FRG + +T++ G N GKSS+ EA + L + + Sbjct: 1 MRVENFRGVAAREVAFAESGVTVIEGDNEAGKSSMMEAFDLLLTTQSSSK 50 >gi|313205117|ref|YP_004043774.1| hypothetical protein Palpr_2659 [Paludibacter propionicigenes WB4] gi|312444433|gb|ADQ80789.1| hypothetical protein Palpr_2659 [Paludibacter propionicigenes WB4] Length = 568 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I ++R E ++EF T ++G+N GKS++ AI + + R G+SI Sbjct: 3 IKRITAKNYRTL-ENIEVEFKGFYTAISGRNNAGKSNIIRAIRGILNQGIRFRFTGNSI 60 >gi|303228832|ref|ZP_07315646.1| DNA repair protein RecN [Veillonella atypica ACS-134-V-Col7a] gi|302516544|gb|EFL58472.1| DNA repair protein RecN [Veillonella atypica ACS-134-V-Col7a] Length = 554 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFKDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|242237463|ref|YP_002985644.1| recombination protein F [Dickeya dadantii Ech703] gi|242129520|gb|ACS83822.1| DNA replication and repair protein RecF [Dickeya dadantii Ech703] Length = 361 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I FR E + + G NG GK+S+ EAI L +G R Sbjct: 1 MALTRLLIRDFRNI-ESADLALIPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAAR 59 Query: 87 IKKRSI 92 + + Sbjct: 60 VIRHDQ 65 >gi|239637036|ref|ZP_04678030.1| exonuclease SbcC [Staphylococcus warneri L37603] gi|239597386|gb|EEQ79889.1| exonuclease SbcC [Staphylococcus warneri L37603] Length = 1009 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +++++F F I+F + L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPMMLKLNNFGPFLNET-IDFRNIDQNQLFLISGKTGSGKTMIFDAIVYALYGEASTKN 59 Query: 83 HGDS 86 ++ Sbjct: 60 RKEN 63 >gi|227499075|ref|ZP_03929212.1| DNA repair protein recN [Acidaminococcus sp. D21] gi|226904524|gb|EEH90442.1| DNA repair protein recN [Acidaminococcus sp. D21] Length = 565 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +E+ F + +I FA + G+ G GKS L +A+ + G Sbjct: 2 LTFLEVQQF-ALIDKVRIGFAPGFNVFTGETGAGKSILIDALGIVLGG 48 >gi|325569751|ref|ZP_08145775.1| DNA repair protein RecN [Enterococcus casseliflavus ATCC 12755] gi|325157056|gb|EGC69222.1| DNA repair protein RecN [Enterococcus casseliflavus ATCC 12755] Length = 557 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F + F + +T + G+ G GKS + +A+ L G R D ++ Sbjct: 2 LLELSIQNF-AIISNLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGG----RGSSDYLR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 QGAEKCRLE 65 >gi|313159323|gb|EFR58687.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 177 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 6/37 (16%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++FR ++EF +T + G+NG GKS+L EAI Sbjct: 32 LANFR------RLEFRRPVTFIMGENGMGKSTLLEAI 62 >gi|330928862|ref|XP_003302431.1| hypothetical protein PTT_14235 [Pyrenophora teres f. teres 0-1] gi|311322250|gb|EFQ89491.1| hypothetical protein PTT_14235 [Pyrenophora teres f. teres 0-1] Length = 1132 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 L+ +++++F +T + L +V G NG GKS+L AI ++ G Sbjct: 71 LVRVKLTNFVTYTAAE-FHLGPSLNMVIGPNGTGKSTLVCAICLGLGWGSEHLGRAKQVG 129 Query: 85 DSIKKRSIKTPMPMCMA 101 + +K + + + +A Sbjct: 130 EYVKHGATMATIEIELA 146 >gi|257865773|ref|ZP_05645426.1| DNA repair protein RecN [Enterococcus casseliflavus EC30] gi|257872108|ref|ZP_05651761.1| DNA repair protein RecN [Enterococcus casseliflavus EC10] gi|257799707|gb|EEV28759.1| DNA repair protein RecN [Enterococcus casseliflavus EC30] gi|257806272|gb|EEV35094.1| DNA repair protein RecN [Enterococcus casseliflavus EC10] Length = 557 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F + F + +T + G+ G GKS + +A+ L G R D ++ Sbjct: 2 LLELSIQNF-AIISNLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGG----RGSSDYLR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 QGAEKCRLE 65 >gi|229075729|ref|ZP_04208707.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock4-18] gi|229098492|ref|ZP_04229434.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-29] gi|229104630|ref|ZP_04235292.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-28] gi|229117519|ref|ZP_04246891.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-3] gi|228665839|gb|EEL21309.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-3] gi|228678694|gb|EEL32909.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-28] gi|228684922|gb|EEL38858.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-29] gi|228707387|gb|EEL59582.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock4-18] Length = 250 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 F ++T + G+NG GKS+L EAI + Sbjct: 38 FHPNVTFIIGENGTGKSTLLEAIAIALGFNAE 69 >gi|153953860|ref|YP_001394625.1| hypothetical protein CKL_1235 [Clostridium kluyveri DSM 555] gi|219854475|ref|YP_002471597.1| hypothetical protein CKR_1132 [Clostridium kluyveri NBRC 12016] gi|146346741|gb|EDK33277.1| RecN [Clostridium kluyveri DSM 555] gi|219568199|dbj|BAH06183.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 565 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 LL + I++F E I F I++G+ G GKS L +AI ++ + Sbjct: 2 LLQLNINNF-ALIEKLIISFESGFNILSGETGAGKSILIDAINYVMGSKFNKDL 54 >gi|126665992|ref|ZP_01736972.1| ATPase [Marinobacter sp. ELB17] gi|126629314|gb|EAZ99931.1| ATPase [Marinobacter sp. ELB17] Length = 426 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA----IEWLF-----YGY 77 + ++ + FRG + ++ ++ L + G NG GKSS+ +A + WL G Sbjct: 1 MHINNLTLQRFRG-AQDLSLDLSEKLNVFVGMNGAGKSSILDASAILLSWLANRIKHSGA 59 Query: 78 TQRRKHGDSIK--KRSIKTPMPMC 99 + R D IK + S + +C Sbjct: 60 SGRPIAEDDIKNGESSANLKVQLC 83 >gi|323977729|gb|EGB72815.1| hypothetical protein ERFG_01251 [Escherichia coli TW10509] Length = 481 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 27 FKLLDIEISHFRGF-TEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + ++I +F+G+ E ++EF L I G+N GKS++ E I+++ G Sbjct: 1 MFIKKLKIENFKGYHGEDNELEFNIPDGETEGSGLNIFVGENNAGKSTVFEIIDFIKDGT 60 >gi|293366688|ref|ZP_06613364.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W2(grey)] gi|291318989|gb|EFE59359.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W2(grey)] Length = 457 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 11/82 (13%) Query: 34 ISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD-SIK 88 + +F F + I+F D L +++G+ G GK+ + +AI + YG + + ++ Sbjct: 1 MENFGPFI-KETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTRKEGDLR 59 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 PM + YQ K Sbjct: 60 SHFADGKSPMSVI-----YQFK 76 >gi|297726705|ref|NP_001175716.1| Os09g0121000 [Oryza sativa Japonica Group] gi|255678683|dbj|BAH94444.1| Os09g0121000 [Oryza sativa Japonica Group] Length = 398 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + ++K Sbjct: 5 ISRIRLENFMCHSSLH-IELGQHVNFITGQNGSGKSAVLTALCIAFGSRAKSTQRAAALK 63 Query: 89 K 89 Sbjct: 64 D 64 >gi|205373565|ref|ZP_03226368.1| SMC domain-containing protein [Bacillus coahuilensis m4-4] Length = 136 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + L + ++ F + +++KI+F + +++G+ G GK+++ + I + YG Sbjct: 1 MRPLQLIMTAFGPYADVEKIDFRLLENRTMFVISGKTGAGKTTIFDGISFAIYG 54 >gi|56460097|ref|YP_155378.1| DNA repair ATPase RecN [Idiomarina loihiensis L2TR] gi|56179107|gb|AAV81829.1| ATPase involved in DNA repair, RecN [Idiomarina loihiensis L2TR] Length = 554 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I +F + IEF + +T + G+ G GKS +A+ Sbjct: 2 LSQLTIRNF-AVVKSLDIEFHNGMTAITGETGAGKSIALDALSLCLGSRADAN 53 >gi|23098600|ref|NP_692066.1| hypothetical protein OB1145 [Oceanobacillus iheyensis HTE831] gi|22776826|dbj|BAC13101.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 978 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ DI I F + + Q+ F+ +T + G+N GKS+L + I ++ +G +++ Sbjct: 1 MRITDIIIYGFGQWVD-QQFTFSSSKITTIYGENESGKSTLQQFIIFMLFGMPPKQRR 57 >gi|332703663|ref|ZP_08423751.1| DNA sulfur modification protein DndD [Desulfovibrio africanus str. Walvis Bay] gi|332553812|gb|EGJ50856.1| DNA sulfur modification protein DndD [Desulfovibrio africanus str. Walvis Bay] Length = 656 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + +++F + Q I+ A + ++ G NG GK+SL AI +G + H Sbjct: 3 LGTLSLTNFGVYAGTQSIDLAPADRKRPIILIGGLNGSGKTSLLTAIRIALFGKRSIQFH 62 Query: 84 GD 85 + Sbjct: 63 KE 64 >gi|301061120|ref|ZP_07201914.1| conserved domain protein [delta proteobacterium NaphS2] gi|300444789|gb|EFK08760.1| conserved domain protein [delta proteobacterium NaphS2] Length = 246 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I + F+ E+ + +L ++ G NG GKS+ + L Sbjct: 5 LEKITVKGFKSIKELNEFRLG-NLNVIIGANGAGKSNFVQIFRMLM 49 >gi|225026447|ref|ZP_03715639.1| hypothetical protein EUBHAL_00696 [Eubacterium hallii DSM 3353] gi|224956239|gb|EEG37448.1| hypothetical protein EUBHAL_00696 [Eubacterium hallii DSM 3353] Length = 340 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I+I +F F +I I F+ L I+ G+NG GK+ + + L Y Q RKH S Sbjct: 3 MPLTRIKIENFTVFEDIT-IPFSKGLNILVGENGMGKTHVMK----LAYAACQSRKHDVS 57 Query: 87 IKKRSIKTPM 96 S KT M Sbjct: 58 F---SQKTTM 64 >gi|149375772|ref|ZP_01893540.1| DNA repair protein RecN [Marinobacter algicola DG893] gi|149359897|gb|EDM48353.1| DNA repair protein RecN [Marinobacter algicola DG893] Length = 559 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + +S++ E +++F +T + G+ G GKS + +A+ G Sbjct: 2 LTQLTVSNY-AIAERVELQFGKGMTALTGETGAGKSIVLDALGLAMGG 48 >gi|91763094|ref|ZP_01265058.1| hypothetical protein PU1002_00510 [Candidatus Pelagibacter ubique HTCC1002] gi|91717507|gb|EAS84158.1| hypothetical protein PU1002_00510 [Candidatus Pelagibacter ubique HTCC1002] Length = 654 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 10/70 (14%) Query: 30 LDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYG------YTQ 79 ++ I++F ++ Q + + + ++ NG GK++ +AI+++ YG Y+Q Sbjct: 4 ENLLINNFGVYSGKQNFDLSTKEKKPVILIGALNGSGKTTFLQAIDFVLYGKFSNFFYSQ 63 Query: 80 RRKHGDSIKK 89 + + + +KK Sbjct: 64 KLSYENFLKK 73 >gi|37519840|ref|NP_923217.1| DNA repair protein [Gloeobacter violaceus PCC 7421] gi|35210831|dbj|BAC88212.1| DNA repair protein [Gloeobacter violaceus PCC 7421] Length = 566 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + ++FA L ++ G+ G GKS + +A++ + G R G ++ Sbjct: 2 LTHLRIENF-ALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGG----RVSGAQVR 56 Query: 89 KRSIK 93 + + Sbjct: 57 TGAQR 61 >gi|145220206|ref|YP_001130915.1| DNA repair protein RecN [Prosthecochloris vibrioformis DSM 265] gi|145206370|gb|ABP37413.1| DNA replication and repair protein RecN [Chlorobium phaeovibrioides DSM 265] Length = 573 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGDSI 87 L + I +F E I F LT++ G+ G GKS + A+ + + D+ Sbjct: 2 LSSLYIRNF-ALIEELTIAFQPGLTVITGETGAGKSIIIGALGLVLGDRSSSEMVRTDAT 60 Query: 88 K 88 K Sbjct: 61 K 61 >gi|229544924|ref|ZP_04433649.1| possible exonuclease SbcC [Enterococcus faecalis TX1322] gi|229309816|gb|EEN75803.1| possible exonuclease SbcC [Enterococcus faecalis TX1322] Length = 367 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|227524703|ref|ZP_03954752.1| DNA repair ATPase [Lactobacillus hilgardii ATCC 8290] gi|227088187|gb|EEI23499.1| DNA repair ATPase [Lactobacillus hilgardii ATCC 8290] Length = 848 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHGDSIKKRSIK 93 +I F L ++ G N GKS++ + I + +G+ +R HG I K Sbjct: 17 TEIPFNQSLEMIYGPNEAGKSTIIDFIISVLFGFQSKRQAIHGQYIPKNHQD 68 >gi|212702163|ref|ZP_03310291.1| hypothetical protein DESPIG_00173 [Desulfovibrio piger ATCC 29098] gi|212674368|gb|EEB34851.1| hypothetical protein DESPIG_00173 [Desulfovibrio piger ATCC 29098] Length = 558 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 ++ +++ +F+ + + Q EF +L +V G NG+GK+S EA+ YG Sbjct: 1 MRISYLKLVNFKSY-KNQIFEFPPSREDKNLILVGGLNGFGKTSFLEALYLGLYGAQA 57 >gi|331000118|ref|ZP_08323812.1| DNA repair protein RecN [Parasutterella excrementihominis YIT 11859] gi|329572893|gb|EGG54516.1| DNA repair protein RecN [Parasutterella excrementihominis YIT 11859] Length = 551 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 36 HFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + R F + +EF+D T + G+ G GKS L +A++ LF + Sbjct: 6 NIRDFVIVDKLDLEFSDGFTALTGETGAGKSILIDALQLLFGARS 50 >gi|303256775|ref|ZP_07342789.1| DNA repair protein RecN [Burkholderiales bacterium 1_1_47] gi|302860266|gb|EFL83343.1| DNA repair protein RecN [Burkholderiales bacterium 1_1_47] Length = 551 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 36 HFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + R F + +EF+D T + G+ G GKS L +A++ LF + Sbjct: 6 NIRDFVIVDKLDLEFSDGFTALTGETGAGKSILIDALQLLFGARS 50 >gi|291521318|emb|CBK79611.1| ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Coprococcus catus GD/7] Length = 242 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 15 KSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 KS+ +Y +K + +L +E F I E + + G+NG GKS+L A+ Sbjct: 16 KSVQAYSIKKSLLRLKGVEAKAFEAVRGI-SFEVKQGEILGITGKNGSGKSTLLRAL 71 >gi|307154551|ref|YP_003889935.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 7822] gi|306984779|gb|ADN16660.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 7822] Length = 665 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + +F + I + + G NG GK++L +A+ YG + Sbjct: 4 TELVLENFGPYAGKHTINLRPEIEENTRPIILFGGMNGGGKTTLMDAMRLALYGSRAQ 61 >gi|189240120|ref|XP_973544.2| PREDICTED: similar to structural maintenance of chromosomes 6 smc6 [Tribolium castaneum] Length = 1002 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + + +F + ++ ++ +++++I+ G+NG GKS++ A+ G G+S+K Sbjct: 47 IIRMVLKNFMCHSMLE-VDLSENISIIIGRNGSGKSAILTALVVGLGGKASLTNRGNSVK 105 >gi|83590623|ref|YP_430632.1| DNA repair ATPase-like protein [Moorella thermoacetica ATCC 39073] gi|83573537|gb|ABC20089.1| ATPase involved in DNA repair-like protein [Moorella thermoacetica ATCC 39073] Length = 901 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLS 67 L + ++ R F + F + I+ G N GKS+L Sbjct: 1 MFLHSLTVAGLRRFRNPVALTGFDPGINIIYGPNECGKSTLI 42 >gi|328853663|gb|EGG02800.1| hypothetical protein MELLADRAFT_49722 [Melampsora larici-populina 98AG31] Length = 378 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + ++F +TE + F HL ++ G NG GKS+ A+ Sbjct: 130 IVRLSATNFMTYTE-VEFHFGSHLNMIIGPNGTGKSAFMCALALGLG 175 >gi|241958308|ref|XP_002421873.1| structural maintenance of chromosomes protein, putative [Candida dubliniensis CD36] gi|223645218|emb|CAX39817.1| structural maintenance of chromosomes protein, putative [Candida dubliniensis CD36] Length = 1073 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 + + + +F ++ + + L ++ G NG GKS+L +I G +RK+ S Sbjct: 26 IRKVRVWNFTTYS-YTEFNLSSTLNMIIGPNGSGKSTLVASICIGLAGSINLIKRKNLKS 84 Query: 87 IKKRSIK 93 + K + Sbjct: 85 MIKTGQE 91 >gi|154491038|ref|ZP_02030979.1| hypothetical protein PARMER_00957 [Parabacteroides merdae ATCC 43184] gi|154088786|gb|EDN87830.1| hypothetical protein PARMER_00957 [Parabacteroides merdae ATCC 43184] Length = 367 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +++ + + + F+ + G NG GK++L +A+ +L + + + Sbjct: 3 LKKLSILNYKNILQAE-VSFSPEINCFFGNNGMGKTNLLDAVHYLSFCKSHINTPDSQLI 61 Query: 89 KRSIK 93 Sbjct: 62 NNGQD 66 >gi|53712250|ref|YP_098242.1| DNA replication and repair protein RecF [Bacteroides fragilis YCH46] gi|253563714|ref|ZP_04841171.1| DNA replication and repair protein recF [Bacteroides sp. 3_2_5] gi|265762438|ref|ZP_06091006.1| DNA replication and repair protein recF [Bacteroides sp. 2_1_16] gi|81690735|sp|Q64XR8|RECF_BACFR RecName: Full=DNA replication and repair protein recF gi|52215115|dbj|BAD47708.1| DNA replication and repair protein RecF [Bacteroides fragilis YCH46] gi|251947490|gb|EES87772.1| DNA replication and repair protein recF [Bacteroides sp. 3_2_5] gi|263255046|gb|EEZ26392.1| DNA replication and repair protein recF [Bacteroides sp. 2_1_16] Length = 370 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELNFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSAGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|328542975|ref|YP_004303084.1| dna repair protein [polymorphum gilvum SL003B-26A1] gi|326412721|gb|ADZ69784.1| Probable dna repair protein [Polymorphum gilvum SL003B-26A1] Length = 556 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+FA +T++ G+ G GKS L +A+ G Sbjct: 14 DRLDIDFAAGMTVLTGETGAGKSILLDALTLALGGRGDAGL 54 >gi|312262447|gb|ADQ52742.1| gp46 recombination endonuclease subunit [Aeromonas phage PX29] Length = 772 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 20/41 (48%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 T+V G NG GKS+ EA+ +L YG R + K Sbjct: 31 TLVTGTNGAGKSTFIEALTFLLYGKAFRDITKAQLVNSQNK 71 >gi|307188414|gb|EFN73171.1| Structural maintenance of chromosomes protein 5 [Camponotus floridanus] Length = 1047 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRKH-G 84 + I + +F + + + +L ++ G NG GKS++ AI G R H G Sbjct: 10 ITRIILENFVTY-DSAIVNPTRYLNVIVGPNGSGKSTIVAAIVLGLGGRPNIIGRALHIG 68 Query: 85 DSIKKRSIKTPMPMCM 100 + +K + + + Sbjct: 69 EYVKYGCQSAKIEIHL 84 >gi|94495802|ref|ZP_01302381.1| DNA replication and repair protein RecF [Sphingomonas sp. SKA58] gi|94424494|gb|EAT09516.1| DNA replication and repair protein RecF [Sphingomonas sp. SKA58] Length = 357 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +S FR + + ++ G NG GK+++ EA+ L G R ++ Sbjct: 2 IGRLTLSDFRNHADALILP-DHAFVLLTGDNGAGKTNILEAVSMLAPGRGLRGAALGAMA 60 Query: 89 KR 90 ++ Sbjct: 61 RQ 62 >gi|49481879|gb|AAT66651.1| DNA repair and genetic recombination protein [Geobacillus thermoleovorans] Length = 573 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-XIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|77406836|ref|ZP_00783866.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae H36B] gi|77174548|gb|EAO77387.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae H36B] Length = 115 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 13/73 (17%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +SK L+ Y L+ + +++ + + + G NG GKS+L +A+ Sbjct: 3 ISKHLSVSYDNNLVLEDINLRLEG-------------SGIIGILGPNGAGKSTLMKALLG 49 Query: 73 LFYGYTQRRKHGD 85 L + GD Sbjct: 50 LVDSTGESGIGGD 62 >gi|158314580|ref|YP_001507088.1| ATP-dependent OLD family endonuclease [Frankia sp. EAN1pec] gi|158109985|gb|ABW12182.1| ATP-dependent endonuclease of the OLD family-like protein [Frankia sp. EAN1pec] Length = 608 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + HFRG D T++ G N GKS++ EA++ + Sbjct: 1 MQVCRVTLRHFRGVEAGTVY--LDGDTLLVGSNSVGKSTVCEALDLVLG 47 >gi|95929988|ref|ZP_01312728.1| Recombinational DNA repair ATPase (RecF pathway)-like [Desulfuromonas acetoxidans DSM 684] gi|95133957|gb|EAT15616.1| Recombinational DNA repair ATPase (RecF pathway)-like [Desulfuromonas acetoxidans DSM 684] Length = 331 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 + I++ +FR F E++ I I+ G NG GK+SL E++ + + + K+ D Sbjct: 2 IEKIKLQNFRCFKELE-INLNKK-NIIYGLNGSGKTSLVESLYLCSNYRTLSPKTKNNDL 59 Query: 87 IKKRSIKTPMPMC 99 IK S + + Sbjct: 60 IKFNSENAEIFIN 72 >gi|22537675|ref|NP_688526.1| manganese ABC transporter ATP-binding protein [Streptococcus agalactiae 2603V/R] gi|25011629|ref|NP_736024.1| hypothetical protein gbs1588 [Streptococcus agalactiae NEM316] gi|76786930|ref|YP_330161.1| metal ABC transporter ATP-binding protein [Streptococcus agalactiae A909] gi|77409237|ref|ZP_00785945.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae COH1] gi|77412530|ref|ZP_00788826.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae CJB111] gi|77414590|ref|ZP_00790732.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae 515] gi|22534563|gb|AAN00399.1|AE014262_4 manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae 2603V/R] gi|24413169|emb|CAD47247.1| unknown [Streptococcus agalactiae NEM316] gi|76561987|gb|ABA44571.1| metal ABC transporter, ATP-binding protein [Streptococcus agalactiae A909] gi|77159351|gb|EAO70520.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae 515] gi|77161415|gb|EAO72430.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae CJB111] gi|77172150|gb|EAO75311.1| manganese ABC transporter, ATP-binding protein [Streptococcus agalactiae COH1] gi|319745469|gb|EFV97773.1| metal ion ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus agalactiae ATCC 13813] Length = 238 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 13/73 (17%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEW 72 +SK L+ Y L+ + +++ + + + G NG GKS+L +A+ Sbjct: 3 ISKHLSVSYDNNLVLEDINLRLEG-------------SGIIGILGPNGAGKSTLMKALLG 49 Query: 73 LFYGYTQRRKHGD 85 L + GD Sbjct: 50 LVDSTGESGIGGD 62 >gi|322381375|ref|ZP_08055378.1| recF-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154951|gb|EFX47222.1| recF-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 383 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + H+R + ++ + ++ I G N GK++L E+I L + R H + Sbjct: 9 LQRLTLHHYRNYQHVELVT-DRNVNIFVGPNAQGKTNLLESIYVLALTKSHRTHHDKELI 67 Query: 89 K 89 + Sbjct: 68 Q 68 >gi|319406519|emb|CBI80161.1| DNA replication and repair protein [Bartonella sp. 1-1C] Length = 370 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ ++R + + H+ ++ G+NG GK++L EA+ +L G RR Sbjct: 1 MAVRQLKLENYRNYCSLALHLLGHHV-VLTGRNGVGKTNLLEALSFLSPGRGLRR 54 >gi|295111234|emb|CBL27984.1| hypothetical protein [Synergistetes bacterium SGP1] Length = 377 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +EI +++ F +E + ++ G NG GK+S+ E I + + H D+I Sbjct: 2 IRKLEIHNYKLFRNFA-LELDGGVNLLCGPNGSGKTSVIE-IVYALTRFLAIPDHSDTIA 59 Query: 89 KRSIKTPMPM 98 S++ P Sbjct: 60 -CSVEDAFPF 68 >gi|282892302|ref|ZP_06300698.1| hypothetical protein pah_c221o038 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497893|gb|EFB40244.1| hypothetical protein pah_c221o038 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 407 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 21/66 (31%) Query: 29 LLDIEISHFRGF----------------TEIQKIEFADHL-----TIVNGQNGYGKSSLS 67 LL + +FR F + EF+ + ++ G N GKS+L Sbjct: 2 LLQFSVKNFRSFESEEVLNLSAGKGSELRDSNTFEFSQNQRLVCSAVIYGPNACGKSNLI 61 Query: 68 EAIEWL 73 AI +L Sbjct: 62 RAIFFL 67 >gi|262375725|ref|ZP_06068957.1| predicted protein [Acinetobacter lwoffii SH145] gi|262309328|gb|EEY90459.1| predicted protein [Acinetobacter lwoffii SH145] Length = 1201 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + + T I+F L + G+ G GKS+L +A+ Y R Sbjct: 1 MKILRLSLHNLASLTGTHHIDFESSPLAHAGLIAITGKTGAGKSTLLDAMCLALYNEIPR 60 >gi|256616805|ref|ZP_05473651.1| exonuclease SbcC [Enterococcus faecalis ATCC 4200] gi|307276931|ref|ZP_07558041.1| exonuclease SbcC [Enterococcus faecalis TX2134] gi|256596332|gb|EEU15508.1| exonuclease SbcC [Enterococcus faecalis ATCC 4200] gi|306506354|gb|EFM75514.1| exonuclease SbcC [Enterococcus faecalis TX2134] gi|315032635|gb|EFT44567.1| exonuclease SbcC [Enterococcus faecalis TX0017] gi|315143787|gb|EFT87803.1| exonuclease SbcC [Enterococcus faecalis TX2141] Length = 1045 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYI-NEIIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|256375043|ref|YP_003098703.1| ATPase AAA [Actinosynnema mirum DSM 43827] gi|255919346|gb|ACU34857.1| AAA ATPase [Actinosynnema mirum DSM 43827] Length = 250 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLF-----YGYTQRRKHGDSIKK 89 +EF +T + G NG GKS+L EAI F G R+ H + + Sbjct: 35 LEFTRPVTFLVGDNGSGKSTLVEAIAEGFGLDARGGRAARKFHDPNAVR 83 >gi|220920057|ref|YP_002495358.1| DNA replication and repair protein RecF [Methylobacterium nodulans ORS 2060] gi|219944663|gb|ACL55055.1| DNA replication and repair protein RecF [Methylobacterium nodulans ORS 2060] Length = 382 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 F++ + FR + + + + G+NG GK+++ EA+ G RR + Sbjct: 7 FRVTRLIARDFRNHASLD-LGVSRPFVALVGENGAGKTNILEALSLFAPGRGLRRADFAA 65 Query: 87 IKKRS 91 + + Sbjct: 66 MAREG 70 >gi|329962146|ref|ZP_08300157.1| DNA replication and repair protein RecF [Bacteroides fluxus YIT 12057] gi|328530794|gb|EGF57652.1| DNA replication and repair protein RecF [Bacteroides fluxus YIT 12057] Length = 369 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELTFSPKLNCFFGQNGMGKTNLLDAVYFLSFCKSA 52 >gi|313894522|ref|ZP_07828086.1| DNA repair protein RecN [Veillonella sp. oral taxon 158 str. F0412] gi|313440918|gb|EFR59346.1| DNA repair protein RecN [Veillonella sp. oral taxon 158 str. F0412] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|313890806|ref|ZP_07824431.1| DNA repair protein RecN [Streptococcus pseudoporcinus SPIN 20026] gi|313120907|gb|EFR44021.1| DNA repair protein RecN [Streptococcus pseudoporcinus SPIN 20026] Length = 553 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F + +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLSFDNGMTVLTGETGAGKSIIIDAMNMMLG----ARASIDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGAQKAEIE 65 >gi|307132516|ref|YP_003884532.1| hypothetical protein Dda3937_03074 [Dickeya dadantii 3937] gi|306530045|gb|ADM99975.1| hypothetical protein Dda3937_03074 [Dickeya dadantii 3937] Length = 382 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS---EAIEWLFYGYTQRRKHGD 85 L + I F+ + E L ++ G NG GKS+L + + L G R Sbjct: 13 LDKLTIKGFKSIRSLVDFELG-SLNVIVGGNGAGKSNLIAFFKMLRALIDGNLNRYVRDS 71 >gi|300214990|gb|ADJ79406.1| Exonuclease [Lactobacillus salivarius CECT 5713] Length = 1033 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + + +F + + EF + L +++G+ G GK+++ +A+ + + +T + Sbjct: 1 MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER 60 Query: 84 GDSIKKRSIKTP 95 + TP Sbjct: 61 DAKQMRSDFATP 72 >gi|294791869|ref|ZP_06757017.1| DNA repair protein RecN [Veillonella sp. 6_1_27] gi|294457099|gb|EFG25461.1| DNA repair protein RecN [Veillonella sp. 6_1_27] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|294793730|ref|ZP_06758867.1| DNA repair protein RecN [Veillonella sp. 3_1_44] gi|294455300|gb|EFG23672.1| DNA repair protein RecN [Veillonella sp. 3_1_44] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|291540130|emb|CBL13241.1| hypothetical protein RO1_28330 [Roseburia intestinalis XB6B4] Length = 79 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+ + +++F F E +I ++D++ I+ G+N GK++L Sbjct: 1 MKIKKLTLNNFMAF-ENAEINWSDNINIICGENSTGKTTLL 40 >gi|291530315|emb|CBK95900.1| hypothetical protein EUS_06270 [Eubacterium siraeum 70/3] Length = 617 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + +FR F E E +T+++GQNG GKS+L I G ++ G + Sbjct: 7 LRPEHFSVEYFRNFKE-VSFELGRKITVISGQNGVGKSNLLSLIA-SGSGLNKKSVLGSN 64 Query: 87 IK 88 + Sbjct: 65 FQ 66 >gi|282850217|ref|ZP_06259596.1| DNA repair protein RecN [Veillonella parvula ATCC 17745] gi|282579710|gb|EFB85114.1| DNA repair protein RecN [Veillonella parvula ATCC 17745] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|238019299|ref|ZP_04599725.1| hypothetical protein VEIDISOL_01163 [Veillonella dispar ATCC 17748] gi|237863998|gb|EEP65288.1| hypothetical protein VEIDISOL_01163 [Veillonella dispar ATCC 17748] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|269797988|ref|YP_003311888.1| DNA repair protein RecN [Veillonella parvula DSM 2008] gi|269094617|gb|ACZ24608.1| DNA repair protein RecN [Veillonella parvula DSM 2008] Length = 554 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMSIRNF-ALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|225619730|ref|YP_002720987.1| D repair and genetic recombination protein [Brachyspira hyodysenteriae WA1] gi|225214549|gb|ACN83283.1| D repair and genetic recombination protein [Brachyspira hyodysenteriae WA1] Length = 569 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI +F + KI F+ ++ G+ G GKS + A+E + R G + Sbjct: 2 LKYLEIRNF-VLIDKLKINFSSGFNVLTGETGAGKSIIISALELITGEKGSTRMVGAN 58 >gi|18402837|ref|NP_565733.1| RAD50; ATP binding / nuclease/ zinc ion binding [Arabidopsis thaliana] gi|57013013|sp|Q9SL02|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gi|7110148|gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana] gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana] gi|29028758|gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana] gi|330253520|gb|AEC08614.1| DNA repair protein RAD50 [Arabidopsis thaliana] Length = 1316 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K + F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTG 53 >gi|15922257|ref|NP_377926.1| hypothetical protein ST1941 [Sulfolobus tokodaii str. 7] gi|15623046|dbj|BAB67035.1| 354aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 354 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 I + +F+ F + +I+ + ++ G NG GKS+ + +L Sbjct: 5 IRVKNFKSF-DDLRIDLHK-VNVLVGPNGAGKSNFVDVFLFL 44 >gi|194337801|ref|YP_002019595.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194310278|gb|ACF44978.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 580 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 9/84 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI---EWLFYGYTQRRKHGD 85 + + + +F+ E Q +F ++ G+N GKS++ +A+ ++ + + + G Sbjct: 2 ITRLTLQNFKNVGE-QTYDFTR-FDLLVGRNNSGKSTVLQALAIWQYCVDEFHRSARRGS 59 Query: 86 SIKKRSIKTPMPMCMAVPRCKYQL 109 I+ +P A+P ++ L Sbjct: 60 K----GIQVVLPNFTALPVPEFNL 79 >gi|332638333|ref|ZP_08417196.1| DNA repair protein RecN [Weissella cibaria KACC 11862] Length = 562 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F I F +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSIQNF-AIIPKLNISFQPGMTVLTGETGAGKSIIIDAVGLLTGG----RGSQDFIR 56 Query: 89 KRSIKT 94 + + KT Sbjct: 57 EGADKT 62 >gi|325475140|gb|EGC78325.1| hypothetical protein HMPREF9353_00339 [Treponema denticola F0402] Length = 639 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL +EI ++ F + Q++E +T V G N GK+S AI Sbjct: 1 MKLTKVEIFKYKCFQKRQEVEIDPRITTVVGMNESGKTSFLSAI 44 >gi|320162555|ref|YP_004175780.1| DNA replication and repair protein RecF [Anaerolinea thermophila UNI-1] gi|319996409|dbj|BAJ65180.1| DNA replication and repair protein RecF [Anaerolinea thermophila UNI-1] Length = 413 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKHGD 85 L + ++HFR F +E ++ G+N GK+SL EAI +L + Sbjct: 1 MHLTHLSLTHFRLFA-RLDMELPRRTLLLVGENAQGKTSLLEAIYYLATFTSLHASLDRQ 59 Query: 86 SIKKRSIKTPMPMCMAVPR 104 + + + P +AV R Sbjct: 60 IVSFAAAREP----LAVAR 74 >gi|311898146|dbj|BAJ30554.1| hypothetical protein KSE_47740 [Kitasatospora setae KM-6054] Length = 312 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + I +S + F ++++ T+ G NG GK++L A+ Sbjct: 4 VYVSRIRVSGVKCFDGAREVDLAIPPGPGWTVFAGPNGSGKTTLLRALAMALG 56 >gi|326782402|ref|YP_004322802.1| recombination endonuclease subunit [Synechococcus phage S-ShM2] gi|310003350|gb|ADO97747.1| recombination endonuclease subunit [Synechococcus phage S-ShM2] Length = 573 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + AD T+V G+NG GKS++ +A+ ++ + R+ + Sbjct: 1 MILFEKIRWKNFLSTGNQFTEFNLADSPSTLVIGRNGAGKSTILDALCFVLFNKPFRKIN 60 Query: 84 GDSI------KKRSIKTPMPMCMAV 102 + K ++ + +++ Sbjct: 61 KPQLVNSINEKDCVVEVEFSINLSL 85 >gi|190341513|gb|ACE74833.1| RecN [Enterobacter gergoviae] Length = 553 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E++ I+F +T + G+ G GKS +A+ R GD ++ Sbjct: 2 LAQLTISNFAIVRELE-IDFHGGMTAITGETGAGKSIAIDALGLCLG----NRAEGDIVR 56 >gi|218665145|ref|YP_002425662.1| GTP-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517358|gb|ACK77944.1| GTP-binding protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 875 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIE 71 ++ +E+ R F E IE L + G N GKSS+ AI Sbjct: 1 MQIERLEMEQVRRFREPLVIENLGPGLNLFAGPNEVGKSSIVRAIR 46 >gi|212545062|ref|XP_002152685.1| DNA repair protein Rad18, putative [Penicillium marneffei ATCC 18224] gi|210065654|gb|EEA19748.1| DNA repair protein Rad18, putative [Penicillium marneffei ATCC 18224] Length = 1143 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G S+K Sbjct: 102 IERVDCFNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGAKASVTNRGQSLK 160 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 161 -SFIKEGKESATIIVRIKNQ 179 >gi|270012741|gb|EFA09189.1| structural maintenance of chromosomes 6 [Tribolium castaneum] Length = 1070 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + + +F + ++ ++ +++++I+ G+NG GKS++ A+ G G+S+K Sbjct: 47 IIRMVLKNFMCHSMLE-VDLSENISIIIGRNGSGKSAILTALVVGLGGKASLTNRGNSVK 105 >gi|119469570|ref|ZP_01612474.1| DNA repair protein recN [Alteromonadales bacterium TW-7] gi|119447105|gb|EAW28375.1| DNA repair protein recN [Alteromonadales bacterium TW-7] Length = 559 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ +EI +F E+ + +T + G+ G GKS +A+ + Sbjct: 2 LVGLEIKNF-AIVSNLSTEWHNGMTAITGETGAGKSIAIDALSLCLGERAEAS 53 >gi|60680428|ref|YP_210572.1| putative DNA replication and repair protein [Bacteroides fragilis NCTC 9343] gi|81316502|sp|Q5LGW6|RECF_BACFN RecName: Full=DNA replication and repair protein recF gi|60491862|emb|CAH06620.1| putative DNA replication and repair protein [Bacteroides fragilis NCTC 9343] Length = 370 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELNFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSAGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|99078470|ref|YP_611728.1| hypothetical protein TM1040_3494 [Ruegeria sp. TM1040] gi|99035608|gb|ABF62466.1| hypothetical protein TM1040_3494 [Ruegeria sp. TM1040] Length = 1144 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L + + F FT+ Q+ +F I+ G+N GK++ EA+ LFYG+ R Sbjct: 1 MRLKRLSLDRFGHFTD-QQFDFGSAHDGHDFHIIYGRNEAGKTTTMEAVLRLFYGFPTRE 59 Query: 82 KH 83 + Sbjct: 60 AY 61 >gi|295097788|emb|CBK86878.1| hypothetical protein ENC_35570 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 75 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE--AIEWLFYG-YTQRRKH 83 L ++ +FRG +I D +T + N GKS+L E AI + G +++ K Sbjct: 1 MWLRKVKNKNFRGDRNTTEIINDDVMTGIVCPNDLGKSTLPEAMAIFFEAEGINSEKNKA 60 Query: 84 GDSI 87 G I Sbjct: 61 GAYI 64 >gi|271968789|ref|YP_003342985.1| ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270511964|gb|ACZ90242.1| ATPase-like protein [Streptosporangium roseum DSM 43021] Length = 409 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L+++E+ +FR I K+ + ++ G NG GK+++ + +L Sbjct: 4 RLVELEVENFRSLRSI-KLPLGP-VNVLIGPNGAGKTNVLKVFRFLAD 49 >gi|227891590|ref|ZP_04009395.1| exonuclease [Lactobacillus salivarius ATCC 11741] gi|227866737|gb|EEJ74158.1| exonuclease [Lactobacillus salivarius ATCC 11741] Length = 1033 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + + +F + + EF + L +++G+ G GK+++ +A+ + + +T + Sbjct: 1 MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER 60 Query: 84 GDSIKKRSIKTP 95 + TP Sbjct: 61 DAKQMRSDFATP 72 >gi|193214989|ref|YP_001996188.1| SMC domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193088466|gb|ACF13741.1| SMC domain protein [Chloroherpeton thalassium ATCC 35110] Length = 400 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ + + +++ F + +I +L + G NG GKS+L + +L Sbjct: 1 MQIEQLHVKNYKVFKD-TEIRGLSNLCVFLGPNGSGKSTLFDVFGFL 46 >gi|169796401|ref|YP_001714194.1| endonuclease [Acinetobacter baumannii AYE] gi|169149328|emb|CAM87212.1| hypothetical protein; putative endonuclease [Acinetobacter baumannii AYE] Length = 597 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +++I +FR F E I +D++ ++ G+N GKS+L A+ + Sbjct: 1 MHLKNLKIRNFRNF-ESIDIPLSDNI-VLLGENRTGKSNLIFAMRLVIDQNLSDSAR 55 >gi|126433478|ref|YP_001069169.1| hypothetical protein Mjls_0869 [Mycobacterium sp. JLS] gi|126233278|gb|ABN96678.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length = 1118 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F+ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHSIPFSAGGALIAGASGSGKSSLLDAI 48 >gi|108797838|ref|YP_638035.1| hypothetical protein Mmcs_0863 [Mycobacterium sp. MCS] gi|119866932|ref|YP_936884.1| hypothetical protein Mkms_0880 [Mycobacterium sp. KMS] gi|108768257|gb|ABG06979.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693021|gb|ABL90094.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length = 1120 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F+ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHSIPFSAGGALIAGASGSGKSSLLDAI 48 >gi|392776|gb|AAC43047.1| RecF protein [Caulobacter crescentus CB15] Length = 67 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 AR +LL + ++ FR + E ++E + G NG GK++L EAI Sbjct: 10 ARMASAELLSLTLADFRSY-ERARLETGGRSVYLFGANGAGKTNLLEAI 57 >gi|319950446|ref|ZP_08024361.1| chromosome partition protein [Dietzia cinnamea P4] gi|319435910|gb|EFV91115.1| chromosome partition protein [Dietzia cinnamea P4] Length = 226 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Query: 29 LLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L + + FRG E ++E + ++ G N GK+SL +A+E L H S Sbjct: 3 LHRLMLEDFRGVVREEVELE-PRGVLVIEGPNESGKTSLMDALEMLLE-------HKASS 54 Query: 88 KKRSIKTPMPMCMAVP 103 + IK P+ VP Sbjct: 55 GRAEIKAASPVGRDVP 70 >gi|331251290|ref|XP_003338244.1| hypothetical protein PGTG_19860 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317234|gb|EFP93825.1| hypothetical protein PGTG_19860 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 955 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + F Q +E + V G NG GKS++ AI L G+S+K Sbjct: 75 ISKVILVQFMCHR-YQVVELGPQINFVIGHNGSGKSAVLTAITLLLGAKASSTNRGNSLK 133 >gi|167035148|ref|YP_001670379.1| SMC domain-containing protein [Pseudomonas putida GB-1] gi|166861636|gb|ABZ00044.1| SMC domain protein [Pseudomonas putida GB-1] Length = 574 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + FR F + + + T++ G N GK++L A+ L Sbjct: 1 MLITRVVLKGFRNFADAT-VGLERN-TLIIGANNVGKTNLVYALRLLLD 47 >gi|306835832|ref|ZP_07468829.1| ATPase [Corynebacterium accolens ATCC 49726] gi|304568306|gb|EFM43874.1| ATPase [Corynebacterium accolens ATCC 49726] Length = 862 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +EI + RG + + + + +++G+N GKS++ EA++ + R G Sbjct: 1 MRIHSLEIKNVRGIEHLVLDDLPETGVVVIHGENEAGKSTIVEALDVVLTEKHTARPSG 59 >gi|294670485|ref|ZP_06735365.1| hypothetical protein NEIELOOT_02203 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307764|gb|EFE49007.1| hypothetical protein NEIELOOT_02203 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 360 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+ + +S ++ E++ +F +L I+ G NG GKS+ Sbjct: 3 KISSLTVSGYKSIRELKDFQFK-NLNILIGANGAGKSNFI 41 >gi|227501658|ref|ZP_03931707.1| ATP-binding protein [Corynebacterium accolens ATCC 49725] gi|227077683|gb|EEI15646.1| ATP-binding protein [Corynebacterium accolens ATCC 49725] Length = 862 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +EI + RG + + + + +++G+N GKS++ EA++ + R G Sbjct: 1 MRIHSLEIKNVRGIEHLVLDDLPETGVVVIHGENEAGKSTIVEALDVVLTEKHTARPSG 59 >gi|269859569|ref|XP_002649509.1| chromosome segregation ATPase [Enterocytozoon bieneusi H348] gi|220067060|gb|EED44528.1| chromosome segregation ATPase [Enterocytozoon bieneusi H348] Length = 917 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I + +++ F KI + + G NG GKS+ AI Sbjct: 1 MYIESISLQNYKSFKNYTKIHLT-SVNWILGTNGSGKSNFISAI 43 >gi|114327842|ref|YP_744999.1| hypothetical protein GbCGDNIH1_1178 [Granulibacter bethesdensis CGDNIH1] gi|114316016|gb|ABI62076.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 690 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ +EI +FR + + + T++ G+N GK+S++E L Sbjct: 1 MRIKGVEIENFRLLRD-VAVGLEERTTLIVGRNNSGKTSIAELFRRLLGE 49 >gi|327534571|gb|AEA93405.1| DNA repair protein RecN [Enterococcus faecalis OG1RF] Length = 557 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + +F ++EF +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQELSVKNF-AIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGG----RGSSDYIR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 + + K + +P+ + Sbjct: 57 QGANKCTLEGLFLMPKSQ 74 >gi|313893791|ref|ZP_07827357.1| hypothetical protein HMPREF9199_0266 [Veillonella sp. oral taxon 158 str. F0412] gi|313441355|gb|EFR59781.1| hypothetical protein HMPREF9199_0266 [Veillonella sp. oral taxon 158 str. F0412] Length = 960 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I F + + + + ++ G N GK+SL E + L +G T + Sbjct: 1 MNIKRIRFDEFGPYRDWSFTTGNNGVQLMYGPNESGKTSLLEGMRTLLFGGTHK 54 >gi|310658856|ref|YP_003936577.1| hypothetical protein CLOST_1552 [Clostridium sticklandii DSM 519] gi|308825634|emb|CBH21672.1| conserved protein of unknown function [Clostridium sticklandii] Length = 644 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL+++ + +F+G ++ +I+ D V G+NG GK+++ +A WL + + Sbjct: 1 MKLINLRLRNFKGIKDLSLEIDGKD--LNVYGENGTGKTTIFDAFMWLLFDKDSQNSSQF 58 Query: 86 SIK 88 ++K Sbjct: 59 NVK 61 >gi|238894648|ref|YP_002919382.1| high-affinity branched-chain amino acid ABC transport system ATP-binding component [Klebsiella pneumoniae NTUH-K2044] gi|330006531|ref|ZP_08305630.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella sp. MS 92-3] gi|238546964|dbj|BAH63315.1| high-affinity branched-chain amino acid ABC transport system ATP-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328535808|gb|EGF62243.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella sp. MS 92-3] Length = 265 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L +I +S F GF + + A L V G NG GK++L + I + + Sbjct: 24 VLQLENINVS-FDGFRALTDLSLAIGVGELRCVIGPNGAGKTTLMDVITGKTRPQSGKAL 82 Query: 83 HGDSI 87 + S+ Sbjct: 83 YDQSV 87 >gi|226309591|ref|YP_002769485.1| DNA replication and repair protein F [Brevibacillus brevis NBRC 100599] gi|254790466|sp|C0ZH40|RECF_BREBN RecName: Full=DNA replication and repair protein recF gi|226092539|dbj|BAH40981.1| DNA replication and repair protein F [Brevibacillus brevis NBRC 100599] Length = 372 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++ ++++R + E + F + + G N GK++ E+I L + R Sbjct: 1 MFLKNLSLTNYRNY-ETMSLSFDGPIQLFIGNNAQGKTNALESIYVLALAKSHRTPRDKE 59 Query: 87 IK 88 + Sbjct: 60 LI 61 >gi|206580895|ref|YP_002238595.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella pneumoniae 342] gi|262044362|ref|ZP_06017425.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288935582|ref|YP_003439641.1| urea ABC transporter ATP-binding protein [Klebsiella variicola At-22] gi|290509618|ref|ZP_06548989.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella sp. 1_1_55] gi|206569953|gb|ACI11729.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella pneumoniae 342] gi|259038250|gb|EEW39458.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288890291|gb|ADC58609.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella variicola At-22] gi|289779012|gb|EFD87009.1| urea ABC transporter, ATP-binding protein UrtD [Klebsiella sp. 1_1_55] Length = 265 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L +I +S F GF + + A L V G NG GK++L + I + + Sbjct: 24 VLQLENINVS-FDGFRALTDLSLAIGVGELRCVIGPNGAGKTTLMDVITGKTRPQSGKAL 82 Query: 83 HGDSI 87 + S+ Sbjct: 83 YDQSV 87 >gi|152970171|ref|YP_001335280.1| ATP-binding component of high-affinity branched-chain amino acid transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955020|gb|ABR77050.1| ATP-binding component of high-affinity branched-chain amino acid transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 265 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L +I +S F GF + + A L V G NG GK++L + I + + Sbjct: 24 VLQLENINVS-FDGFRALTDLSLAIGVGELRCVIGPNGAGKTTLMDVITGKTRPQSGKAL 82 Query: 83 HGDSI 87 + S+ Sbjct: 83 YDQSV 87 >gi|187479196|ref|YP_787221.1| DNA repair protein [Bordetella avium 197N] gi|115423783|emb|CAJ50334.1| DNA repair protein [Bordetella avium 197N] Length = 550 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I F E +I F T+ G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTEIHFGAGFTVFTGETGAGKSILIDALALALGERGDASV 54 >gi|90962341|ref|YP_536257.1| exonuclease [Lactobacillus salivarius UCC118] gi|90821535|gb|ABE00174.1| Exonuclease [Lactobacillus salivarius UCC118] Length = 1033 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + + +F + + EF + L +++G+ G GK+++ +A+ + + +T + Sbjct: 1 MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER 60 Query: 84 GDSIKKRSIKTP 95 + TP Sbjct: 61 DAKQMRSDFATP 72 >gi|163941763|ref|YP_001646647.1| SMC domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163863960|gb|ABY45019.1| SMC domain protein [Bacillus weihenstephanensis KBAB4] Length = 250 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 F ++T + G+NG GKS+L EAI + Sbjct: 38 FHPNVTFIIGENGTGKSTLLEAIAVALGFNAE 69 >gi|325498710|gb|EGC96569.1| DNA sulfur modification protein DndD [Escherichia fergusonii ECD227] Length = 666 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLRNFRVFNGTHTIDLAPRKRPHDLNPRPIVLFGGLNGAGKTSILSAIRIALYG 60 >gi|322390910|ref|ZP_08064418.1| hypothetical protein HMPREF8577_1888 [Streptococcus parasanguinis ATCC 903] gi|321142423|gb|EFX37893.1| hypothetical protein HMPREF8577_1888 [Streptococcus parasanguinis ATCC 903] Length = 679 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ I I H+R + +E + L+++ G+N GK+S+ +E +F + R Sbjct: 1 MEIKKIYIQHYRSLNDF-SLELKNDLSLIVGKNNCGKTSVLSVLEKIFNKNSNRNL 55 >gi|189199338|ref|XP_001936006.1| structural maintenance of chromosomes protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983105|gb|EDU48593.1| structural maintenance of chromosomes protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1128 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 L+ +++++F +T + L +V G NG GKS+L AI ++ G Sbjct: 71 LVRVKLTNFVTYTAAE-FHLGPSLNMVIGPNGTGKSTLVCAICLGLGWGSEHLGRAKQVG 129 Query: 85 DSIKKRSIKTPMPMCMA 101 + +K + + + +A Sbjct: 130 EYVKHGAAMATIEIELA 146 >gi|78044412|ref|YP_360538.1| M protein-like MukB domain-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996527|gb|ABB15426.1| MukB N-terminal domain/M protein repeat protein [Carboxydothermus hydrogenoformans Z-2901] Length = 1101 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Query: 32 IEISHFRGFTEIQKIEFA---------DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +++ +F+ I+ I + T++ G NG GKS++ +AI+++ ++ + Sbjct: 1 MKVENFKELRGIKLINWHYFQNETIKLKGATLLTGDNGSGKSTILDAIQYVLVADQRKVR 60 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCK 106 S + K + + RCK Sbjct: 61 FNSSAGEEHSKRDL---LGYVRCK 81 >gi|261880338|ref|ZP_06006765.1| recombination protein F [Prevotella bergensis DSM 17361] gi|270333029|gb|EFA43815.1| recombination protein F [Prevotella bergensis DSM 17361] Length = 375 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L +I I +++ + ++ F+ + G NG GK++L +AI +L Sbjct: 1 MVLKNISIINYKNISA-AQLAFSPKINCFIGNNGEGKTNLLDAIYYL 46 >gi|156376571|ref|XP_001630433.1| predicted protein [Nematostella vectensis] gi|156217454|gb|EDO38370.1| predicted protein [Nematostella vectensis] Length = 1054 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F T ++ + ++ + G+NG GKS++ A+ G G S+K Sbjct: 5 IEKVTLVNFMCHTMLE-VPLGPNVNFIIGRNGSGKSAIMTALVVGLGGKATVTSRGSSLK 63 >gi|145219448|ref|YP_001130157.1| hypothetical protein Cvib_0637 [Prosthecochloris vibrioformis DSM 265] gi|145205612|gb|ABP36655.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265] Length = 402 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ + + ++R +I + LT++ G NG GKS++ + +L Sbjct: 10 RVESLRVQNYRALKDIT-FKQLTPLTVLLGPNGSGKSTVFDVFAFL 54 >gi|226322988|ref|ZP_03798506.1| hypothetical protein COPCOM_00760 [Coprococcus comes ATCC 27758] gi|225208555|gb|EEG90909.1| hypothetical protein COPCOM_00760 [Coprococcus comes ATCC 27758] Length = 104 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 R+ + + I ++++ + + + + ++ + G +G GKS++ +AI+ + Y T R Sbjct: 4 RQPFWAISKICLNNWH-YIDRKILTLSEGINFFTGHSGSGKSTVIDAIQIVLYANTDGRG 62 >gi|218676547|ref|YP_002395366.1| predicted ATP-dependent endonuclease [Vibrio splendidus LGP32] gi|218324815|emb|CAV26524.1| predicted ATP-dependent endonuclease [Vibrio splendidus LGP32] Length = 590 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ + Sbjct: 1 MQLERIEISGFRGI-KRMSLAF-DELTTLIGENTWGKSSLLDALSVVL 46 >gi|218438832|ref|YP_002377161.1| hypothetical protein PCC7424_1861 [Cyanothece sp. PCC 7424] gi|218171560|gb|ACK70293.1| conserved hypothetical protein [Cyanothece sp. PCC 7424] Length = 353 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK------ 82 L D+ I ++RGF + I+ + ++ G N GK+S EAI L +R Sbjct: 2 LKDLRIQNYRGFEDFY-IDGLARVNLIVGDNNIGKTSFLEAIYLLVNQDEYKRLLEVIYN 60 Query: 83 HGDSIKKRSIKTPMPMCM 100 H D I++R++ P + Sbjct: 61 HDDLIEERNLGMPYQPNI 78 >gi|148981700|ref|ZP_01816499.1| predicted ATP-dependent endonuclease [Vibrionales bacterium SWAT-3] gi|145960772|gb|EDK26109.1| predicted ATP-dependent endonuclease [Vibrionales bacterium SWAT-3] Length = 573 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ + Sbjct: 1 MQLERIEISGFRGI-KRMSLAF-DELTTLIGENTWGKSSLLDALSVVL 46 >gi|118359750|ref|XP_001013113.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila] gi|89294880|gb|EAR92868.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1937 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 23/41 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + I I F+ ++ + +D++ I+ G+NG GKS+L Sbjct: 1 MSIKSISIEKFKSYSNCKIEGLSDNINILYGKNGSGKSNLL 41 >gi|86148316|ref|ZP_01066610.1| predicted ATP-dependent endonuclease [Vibrio sp. MED222] gi|85833871|gb|EAQ52035.1| predicted ATP-dependent endonuclease [Vibrio sp. MED222] Length = 590 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ + Sbjct: 1 MQLERIEISGFRGI-KRMSLAF-DELTTLIGENTWGKSSLLDALSVVL 46 >gi|84393525|ref|ZP_00992280.1| predicted ATP-dependent endonuclease [Vibrio splendidus 12B01] gi|84375878|gb|EAP92770.1| predicted ATP-dependent endonuclease [Vibrio splendidus 12B01] Length = 603 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L IEIS FRG + + F D LT + G+N +GKSSL +A+ + Sbjct: 1 MQLERIEISGFRGI-KRMSLAF-DELTTLIGENTWGKSSLLDALSVVL 46 >gi|319944470|ref|ZP_08018744.1| hemin ABC superfamily ATP binding cassette transporter, ABC protein [Lautropia mirabilis ATCC 51599] gi|319742431|gb|EFV94844.1| hemin ABC superfamily ATP binding cassette transporter, ABC protein [Lautropia mirabilis ATCC 51599] Length = 274 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 8/67 (11%) Query: 32 IEISHFRGFTEIQ------KIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYT-QRRKH 83 +E+ + ++F +T + G NG GK+SL A+ + R + Sbjct: 2 LEVENLHLHAGTHPVACGYSVQFHPGEVTAIIGPNGCGKTSLMRALFGELHPSAGHIRLN 61 Query: 84 GDSIKKR 90 GD +++ Sbjct: 62 GDDQREQ 68 >gi|316957977|gb|EFV47243.1| putative RecF/RecN/SMC N domain protein [Trichinella spiralis] Length = 193 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F +I +EF + + + G NG GKS+L A+ G ++ Sbjct: 21 IKRLRVRNFMCHRDID-LEFGERVNFIIGVNGSGKSALLSAVMVALGCRAVDTSRGSNLS 79 Query: 89 K 89 Sbjct: 80 D 80 >gi|311694467|gb|ADP97340.1| GTP-binding protein [marine bacterium HP15] Length = 882 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + I R F + ++ L +++G N GKS+L AI F+ + D Sbjct: 1 MKLQRMRIEQLRQFRKPFVLDNLQPGLNLIHGPNESGKSTLVRAIRAAFFERYRSTAVDD 60 >gi|301612259|ref|XP_002935632.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5-like [Xenopus (Silurana) tropicalis] Length = 1068 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I++ +F + + HL ++ G NG GKSS+ AI G T D + Sbjct: 31 ITRIKMENFLTYDHCEVFP-GPHLNMIVGANGTGKSSIVCAICLGLAGKTAFIGRADKV 88 >gi|294010393|ref|YP_003543853.1| putative ATP-dependent endonuclease of the OLD family [Sphingobium japonicum UT26S] gi|292673723|dbj|BAI95241.1| putative ATP-dependent endonuclease of the OLD family [Sphingobium japonicum UT26S] Length = 596 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQR 80 + ++ ++IS+F F+EI +E +++ ++ G+N GKS+ A++ + G ++R Sbjct: 1 MTVRISRVKISNFANFSEIN-LETGENI-VIVGENKVGKSNFIRALQLILDPGLSER 55 >gi|262195692|ref|YP_003266901.1| DNA repair protein RecN [Haliangium ochraceum DSM 14365] gi|262079039|gb|ACY15008.1| DNA repair protein RecN [Haliangium ochraceum DSM 14365] Length = 605 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRKHG 84 L + + +F ++ I+F + ++ G+ G GKS + EA+ L G R Sbjct: 2 LRHLRVINFAILSD-VAIDFGEGFNVLTGETGAGKSLIVEAVNLLRGGRASADIPRAGAD 60 Query: 85 DSIKKRSIKTPMPMCMAVPR 104 ++ + + P + + V R Sbjct: 61 QAVVEAIFEVPADLALGVRR 80 >gi|182433794|ref|YP_001821513.1| hypothetical protein SGR_1t [Streptomyces griseus subsp. griseus NBRC 13350] gi|182440929|ref|YP_001828648.1| hypothetical protein SGR_7138t [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462310|dbj|BAG16830.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469445|dbj|BAG23965.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 627 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 R+ L+IE + F +++ F LT + G+ G GKS+L EA+ W Sbjct: 9 RRQQMVALNIEFAVFEVGDGVEERRFNAPLTALTGETGSGKSTLLEAVWWTLG 61 >gi|20089872|ref|NP_615947.1| hypothetical protein MA0995 [Methanosarcina acetivorans C2A] gi|19914823|gb|AAM04427.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 251 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++Q + F +T + G+NG GKS++ E+I + YG+ + Sbjct: 36 DLQSLSFHPKVTFIIGENGSGKSTILESIA-VAYGFNAEGGTKN 78 >gi|321465331|gb|EFX76333.1| putative SMC5, structural maintenance of chromosome protein 5 [Daphnia pulex] Length = 1244 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ I + F + E++ I +L ++ G NG GKS++ AI Sbjct: 20 IVRIHLKDFMTYNEVELIP-GPNLNLILGPNGNGKSAIVSAI 60 >gi|297195706|ref|ZP_06913104.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|297152910|gb|EFH32050.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 1021 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Query: 34 ISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ F F Q+++F + + +++G G GK+S+ +A+ + YG Sbjct: 3 VTAFGPFGATQEVDFDALASSGIFLLHGPTGAGKTSVLDAVCFALYG 49 >gi|296454982|ref|YP_003662126.1| DNA repair ATPase [Bifidobacterium longum subsp. longum JDM301] gi|296184414|gb|ADH01296.1| ATPase for DNA repair [Bifidobacterium longum subsp. longum JDM301] Length = 495 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAI---EWLFYGY 77 + +L + + + R + ++F D +T + GQNG GK+++ +AI L G Sbjct: 1 MIRLQRLVLDNMRNISHGV-LDFDDLPAGGSVTGIYGQNGSGKTTVIDAIGILRALLSGN 59 Query: 78 TQRRKHGDSI 87 GD+I Sbjct: 60 MLPDTAGDAI 69 >gi|302918377|ref|XP_003052644.1| hypothetical protein NECHADRAFT_35358 [Nectria haematococca mpVI 77-13-4] gi|256733584|gb|EEU46931.1| hypothetical protein NECHADRAFT_35358 [Nectria haematococca mpVI 77-13-4] Length = 1092 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 ++ + + +F + E + HL +V G NG GKSSL AI GY+ + Sbjct: 76 IVRVSVENFVTY-EKAEFLPGPHLNMVVGPNGTGKSSLVCAI--CLGLGYSPKHL 127 >gi|239620936|ref|ZP_04663967.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516197|gb|EEQ56064.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 495 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAI---EWLFYGY 77 + +L + + + R + ++F D +T + GQNG GK+++ +AI L G Sbjct: 1 MIRLQRLVLDNMRNISHGV-LDFDDLPAGGSVTGIYGQNGSGKTTVIDAIGILRALLSGN 59 Query: 78 TQRRKHGDSI 87 GD+I Sbjct: 60 MLPDTAGDAI 69 >gi|119173068|ref|XP_001239047.1| hypothetical protein CIMG_10069 [Coccidioides immitis RS] Length = 1194 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 ++ I++S+F +T + + L +V G NG GKS+L AI Q Sbjct: 116 IVRIKLSNFVTYTSAE-LRPGPRLNLVIGPNGTGKSTLVCAICLGLGEGPQHLGRAKDAA 174 Query: 85 DSIKKRSIKTPMPMCMAVP 103 + IK + + + +A P Sbjct: 175 EYIKHGCREATIEIELAAP 193 >gi|27227809|emb|CAD59413.1| SMC6 protein [Oryza sativa] Length = 1040 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + ++K Sbjct: 5 ISRIRLENFMCHSSLH-IELGQHVNFITGQNGSGKSAVLTALCIAFGSRAKSTQRAAALK 63 Query: 89 K 89 Sbjct: 64 D 64 >gi|23465805|ref|NP_696408.1| hypothetical protein BL1243 [Bifidobacterium longum NCC2705] gi|23326498|gb|AAN25044.1| hypothetical protein with possible RecF domain [Bifidobacterium longum NCC2705] Length = 495 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAI---EWLFYGY 77 + +L + + + R + ++F D +T + GQNG GK+++ +AI L G Sbjct: 1 MIRLQRLVLDNMRNISHGV-LDFDDLPAGGSVTGIYGQNGSGKTTVIDAIGILRALLSGN 59 Query: 78 TQRRKHGDSI 87 GD+I Sbjct: 60 MLPDTAGDAI 69 >gi|194336535|ref|YP_002018329.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309012|gb|ACF43712.1| SMC domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 1171 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ +E+ F F+ Q ++F+ L IV G N GKSS A++ LF+G+ R Sbjct: 1 MKIKRLELKAFGPFSG-QLLDFSSPLPGLHIVYGPNEAGKSSAMRALQALFFGFPLR 56 >gi|330447547|ref|ZP_08311195.1| ATP-dependent endonuclease of the OLD family-like protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491738|dbj|GAA05692.1| ATP-dependent endonuclease of the OLD family-like protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 548 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL + I +F+G K+ D++ I+ G N KS++ +A E Sbjct: 1 MKLSALLIENFKGIKSEVKV-LIDNVVILIGPNNCRKSTVLDAYE 44 >gi|317969242|ref|ZP_07970632.1| putative DNA repair ATPase [Synechococcus sp. CB0205] Length = 895 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL + R ++Q + F LT+V G N GKS+L EA+ + + G Sbjct: 1 MHLLSCRLQRVRQHLDLQ-LNFGRQLTLVGGVNESGKSTLVEALHKTLFLRSTATGRG-- 57 Query: 87 IKKRSIKT-----PMPMCMAVPRCKYQLK 110 +++ +T + +C A ++ L+ Sbjct: 58 VEELRSRTHGGLPEVELCFAAQGERWTLR 86 >gi|307822993|ref|ZP_07653223.1| DNA sulfur modification protein DndD [Methylobacter tundripaludum SV96] gi|307735768|gb|EFO06615.1| DNA sulfur modification protein DndD [Methylobacter tundripaludum SV96] Length = 678 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 10/78 (12%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +IFK I +++ + + + + + I+ G+NG GK+S +++ LF G T Sbjct: 1 MIFK--TITLNNLFSYYGTHDFDLSPNPDGHRNIVIIMGRNGLGKTSFLNSVKLLFGGVT 58 Query: 79 QRRKHGDSIKKRSIKTPM 96 + S+++ S+ P Sbjct: 59 -KDLTA-SVQRGSVTQPK 74 >gi|303240103|ref|ZP_07326624.1| SMC protein-like protein [Acetivibrio cellulolyticus CD2] gi|302592372|gb|EFL62099.1| SMC protein-like protein [Acetivibrio cellulolyticus CD2] Length = 876 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +++ F F + I+F + +V G+N GKS++ I+ + Y + + Sbjct: 1 MKIEKLDLKGFGKFNNFE-IKFDEGFNVVYGENESGKSTIEAFIKAMLY--SLKGGR 54 >gi|289679652|ref|ZP_06500542.1| hypothetical protein PsyrpsF_40517 [Pseudomonas syringae pv. syringae FF5] Length = 590 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 8/86 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS-- 86 L I I +FR + + D T + GQN GKS++ +AI + + + Sbjct: 4 LSKIHIKNFRS-CKQVILPLGD-FTPLVGQNNAGKSTILDAIRLVLAPKAFAKTDANDQT 61 Query: 87 ----IKKRSIKTPMPMCMAVPRCKYQ 108 I + +P K+Q Sbjct: 62 QPIIISACVSGITEELIAQIPEAKHQ 87 >gi|242240951|ref|YP_002989132.1| hypothetical protein Dd703_3552 [Dickeya dadantii Ech703] gi|242133008|gb|ACS87310.1| conserved hypothetical protein [Dickeya dadantii Ech703] Length = 416 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 15/89 (16%) Query: 29 LLDIEISHFRGFTE--------IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT-- 78 + + I +FR + +K + LT V G+NG GKSSL +A +L T Sbjct: 4 IEGMRIKNFRTLRDVTLGKTLSNKKQKPLSPLTTVIGRNGSGKSSLFDAFGFLADCLTYG 63 Query: 79 -----QRRKHGDSIKKRSIKTPMPMCMAV 102 R G K +S + M V Sbjct: 64 VEDACHRNGRGGFTKLKSFGSEGDMEFEV 92 >gi|172051565|emb|CAQ34961.1| hypothetical protein [Photobacterium damselae subsp. piscicida] Length = 883 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAFG 305 >gi|297582149|ref|ZP_06944067.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297533669|gb|EFH72512.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 548 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL + I +F+G K+ D++ I+ G N KS++ +A E Sbjct: 1 MKLSALLIENFKGIKSEVKV-LIDNVVILIGPNNCRKSTVLDAYE 44 >gi|153821462|ref|ZP_01974129.1| ATPases involved in DNA repair [Vibrio cholerae B33] gi|229509121|ref|ZP_04398608.1| hypothetical protein VCE_000523 [Vibrio cholerae B33] gi|229608793|ref|YP_002879441.1| hypothetical protein VCD_003715 [Vibrio cholerae MJ-1236] gi|126521062|gb|EAZ78285.1| ATPases involved in DNA repair [Vibrio cholerae B33] gi|229353878|gb|EEO18813.1| hypothetical protein VCE_000523 [Vibrio cholerae B33] gi|229371448|gb|ACQ61871.1| hypothetical protein VCD_003715 [Vibrio cholerae MJ-1236] Length = 883 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAFG 305 >gi|21885316|gb|AAL59722.1| unknown [Vibrio cholerae] Length = 896 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 282 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAFG 318 >gi|20095134|gb|AAM08000.1| hypothetical protein [Providencia rettgeri] gi|262318146|dbj|BAI48472.1| hypothetical protein [Proteus mirabilis] Length = 883 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAFG 305 >gi|254850934|ref|ZP_05240284.1| ATPase [Vibrio cholerae MO10] gi|254846639|gb|EET25053.1| ATPase [Vibrio cholerae MO10] gi|259156296|gb|ACV96242.1| DNA repair ATPase [Vibrio cholerae Ind4] Length = 883 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 G+ + IE +DHL V G G GKS+L E I + F Sbjct: 269 GYLDSVDIELSDHLNAVIGGRGTGKSTLLECIRYAFG 305 >gi|301155920|emb|CBW15390.1| recombination and repair protein [Haemophilus parainfluenzae T3T1] Length = 558 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F +IEFA ++++ G+ G GKS +A+ + Sbjct: 2 LTQLTINNF-AIVRQLEIEFAKGMSVITGETGAGKSIAIDALGLCLGQRIETSM 54 >gi|302756115|ref|XP_002961481.1| hypothetical protein SELMODRAFT_60327 [Selaginella moellendorffii] gi|300170140|gb|EFJ36741.1| hypothetical protein SELMODRAFT_60327 [Selaginella moellendorffii] Length = 1038 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I + +F + I+F D++ + GQNG GKS++ A+ Sbjct: 4 IARIRVENFMCHS-NLSIDFVDNVNFITGQNGSGKSAILTAL 44 >gi|326315890|ref|YP_004233562.1| AAA ATPase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372726|gb|ADX44995.1| AAA ATPase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 251 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 21/30 (70%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +I +I+F ++T G+NG GKS++ EA+ Sbjct: 33 AQIDQIDFHPNVTFFVGENGAGKSTVLEAL 62 >gi|260428387|ref|ZP_05782366.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260422879|gb|EEX16130.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 568 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I +F+ F + IEF+ +T++ G N GKSS+ ++I Sbjct: 7 IENFKAFGDSGAIEFSP-ITVLCGVNSAGKSSIIKSI 42 >gi|255713132|ref|XP_002552848.1| KLTH0D02816p [Lachancea thermotolerans] gi|238934228|emb|CAR22410.1| KLTH0D02816p [Lachancea thermotolerans] Length = 1094 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + + +F + + + + L ++ G NG GKS+ A+ G + I+ Sbjct: 47 IVTLRLENFVTYA-LTEFHMSPSLNMIIGPNGSGKSTFVCAVCLGLAGKPEYIGRSTKIE 105 Query: 89 K 89 Sbjct: 106 D 106 >gi|228997242|ref|ZP_04156866.1| hypothetical protein bmyco0003_18250 [Bacillus mycoides Rock3-17] gi|228762516|gb|EEM11439.1| hypothetical protein bmyco0003_18250 [Bacillus mycoides Rock3-17] Length = 707 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQ------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L I + +FR F + ++ G+N GK+++ + I++L + Sbjct: 1 MYLKSISLYNFRQFGINDDGSPGITVHLNPKFNVLVGENDSGKTAIIDGIKYLLGSVS 58 >gi|198284866|ref|YP_002221187.1| hypothetical protein Lferr_2794 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667470|ref|YP_002427549.1| PHP domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249387|gb|ACH84980.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519683|gb|ACK80269.1| PHP domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 894 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 21/36 (58%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 GF + ++ F +L ++ G G GKS++ E++ + Sbjct: 283 GFLDGTRLHFNGNLNVLVGGRGTGKSTIIESLRYAL 318 >gi|167647332|ref|YP_001684995.1| AAA ATPase [Caulobacter sp. K31] gi|167349762|gb|ABZ72497.1| AAA ATPase [Caulobacter sp. K31] Length = 246 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCM 100 ++ + F +T + G+NG GKS+L EA+ + + + R+ +P+ + Sbjct: 33 RDLDTLAFHPRVTFLVGENGSGKSTLIEALAVAWGFNAEGGSRNFQLSTRASHSPLHQHL 92 Query: 101 AVPRC 105 RC Sbjct: 93 ---RC 94 >gi|157118735|ref|XP_001653235.1| ATP-binding cassette sub-family A member 3, putative [Aedes aegypti] gi|108875614|gb|EAT39839.1| ATP-binding cassette sub-family A member 3, putative [Aedes aegypti] Length = 1569 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 11/83 (13%) Query: 28 KLLDIEISHFRGFTEIQKIE--------FADHLTIVNGQNGYGKSSLSEAIEWLF---YG 76 K+ I+I + R + +KI F D +T++ G NG GK++ + +F G Sbjct: 429 KIAGIQIRNLRKEYDKKKIAVSGLSLNMFEDQITVLLGHNGAGKTTTMSMLTGIFAPTSG 488 Query: 77 YTQRRKHGDSIKKRSIKTPMPMC 99 + + S++ + +C Sbjct: 489 TAIINGYDITTDLDSVRGSLGLC 511 >gi|121606430|ref|YP_983759.1| ATPase-like protein [Polaromonas naphthalenivorans CJ2] gi|120595399|gb|ABM38838.1| ATPase-like protein [Polaromonas naphthalenivorans CJ2] Length = 426 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 38/99 (38%) Query: 29 LLDIEISHFRGFTEIQKI----------------------EFAD--HLTIVNGQNGYGKS 64 L++ +++FR F E Q + +F+D + ++ G N GKS Sbjct: 2 LIEFSVTNFRSFRERQTLSMVAAPRLRKRENVFKPESAGEKFSDLLKVAVIYGPNASGKS 61 Query: 65 SLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVP 103 +L +A+ D +++ + + P + +P Sbjct: 62 NLLKAL--------------DVVRRIAQREPSTRNIPLP 86 >gi|330895386|gb|EGH27724.1| hypothetical protein PSYJA_01284 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 564 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ I + +++ E + F D T ++G+N GK+S+ +A++ L Sbjct: 1 MKIKSIVVKNYKTL-ENVPLTFGDTFTSISGRNNAGKTSVIKALQGLL 47 >gi|330685913|gb|EGG97541.1| nuclease sbcCD subunit C family protein [Staphylococcus epidermidis VCU121] Length = 265 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + +++++F F I+F + L +++G+ G GK+ + +AI + YG + Sbjct: 1 MKPMMLKLNNFGPFLNET-IDFRNIDQNQLFLISGKTGSGKTMIFDAIVYALYGEASTKN 59 Query: 83 HGDS 86 ++ Sbjct: 60 RKEN 63 >gi|303324093|ref|XP_003072034.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111744|gb|EER29889.1| SMC family, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1194 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 ++ I++S+F +T + + L +V G NG GKS+L AI Q Sbjct: 116 IVRIKLSNFVTYTSAE-LRPGPRLNLVIGPNGTGKSTLVCAICLGLGEGPQHLGRAKDAA 174 Query: 85 DSIKKRSIKTPMPMCMAVP 103 + IK + + + +A P Sbjct: 175 EYIKHGCREATIEIELAAP 193 >gi|164686808|ref|ZP_02210836.1| hypothetical protein CLOBAR_00404 [Clostridium bartlettii DSM 16795] gi|164604198|gb|EDQ97663.1| hypothetical protein CLOBAR_00404 [Clostridium bartlettii DSM 16795] Length = 581 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I++FR F I IE D+ +V G N GK++ A+ +L ++ Sbjct: 3 LKKLDINNFRNFNSI-SIEL-DNKNVVFGMNDVGKTNFLYALRFLLDKDIRKNG 54 >gi|81428014|ref|YP_395013.1| Iron(III)-compound ABC transporter, ATP-binding subunit [Lactobacillus sakei subsp. sakei 23K] gi|78609655|emb|CAI54701.1| Iron(III)-compound ABC transporter, ATP-binding subunit [Lactobacillus sakei subsp. sakei 23K] Length = 267 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 15/78 (19%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 Y R+LI + L I+I +T + G NG GKS+L + L + Sbjct: 13 YNRRLIIQDLSIQIP-------------QGQITTLIGPNGSGKSTLIRTLAHLLKPSSGT 59 Query: 81 RKHGDSIKKRSIKTPMPM 98 D + + KTP M Sbjct: 60 VLLAD--QALATKTPKEM 75 >gi|268531906|ref|XP_002631081.1| Hypothetical protein CBG02854 [Caenorhabditis briggsae] Length = 1131 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +++ +F +Q I+F ++ + G NG GKS+L AI G G Sbjct: 28 RVASVKLQNFMCHANLQ-IDFNTKQNNCFYIGGPNGSGKSALFAAINLGLGGRGSDNDRG 86 Query: 85 DSIK 88 ++K Sbjct: 87 STVK 90 >gi|323352714|ref|ZP_08087684.1| DNA repair protein RecN [Streptococcus sanguinis VMC66] gi|322121750|gb|EFX93496.1| DNA repair protein RecN [Streptococcus sanguinis VMC66] Length = 552 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGASKAEIE 65 >gi|314936358|ref|ZP_07843705.1| DNA repair protein RecN [Staphylococcus hominis subsp. hominis C80] gi|313654977|gb|EFS18722.1| DNA repair protein RecN [Staphylococcus hominis subsp. hominis C80] Length = 557 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIHFSDGLTVLSGETGSGKSIIIDAI 42 >gi|294140878|ref|YP_003556856.1| hypothetical protein SVI_2107 [Shewanella violacea DSS12] gi|293327347|dbj|BAJ02078.1| hypothetical protein [Shewanella violacea DSS12] Length = 671 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 11/62 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLT-----------IVNGQNGYGKSSLSEAIEWLFYGY 77 + + I++FR F + +I+ A + + G NG GK+S+ A+ YG Sbjct: 3 IKSLVINNFRVFRGVHEIDLAPRINRKHQTTPSPIILFGGLNGSGKTSILTAVRVALYGR 62 Query: 78 TQ 79 Sbjct: 63 AA 64 >gi|288800759|ref|ZP_06406216.1| RecF protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332220|gb|EFC70701.1| RecF protein [Prevotella sp. oral taxon 299 str. F0039] Length = 369 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 L I + +++ +I ++ + + G NG GK+++ +A+ +L + + + Sbjct: 3 LKKITLLNYKNIEDIT-LDLSPKMNCFIGHNGVGKTNMLDAVYYLSFCRSSSNTVDSQV 60 >gi|242373819|ref|ZP_04819393.1| DNA repair protein RecN [Staphylococcus epidermidis M23864:W1] gi|242348373|gb|EES39975.1| DNA repair protein RecN [Staphylococcus epidermidis M23864:W1] Length = 558 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIHFSDGLTVLSGETGSGKSIIIDAI 42 >gi|255658839|ref|ZP_05404248.1| putative ATP-binding protein [Mitsuokella multacida DSM 20544] gi|260849238|gb|EEX69245.1| putative ATP-binding protein [Mitsuokella multacida DSM 20544] Length = 340 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + +E+ +F E+ ++F+ + + G+NG GK+ + +A+ Sbjct: 1 MYIKHLELENFTVLHELN-MDFSRGINVFIGENGMGKTHIMKAL 43 >gi|224476630|ref|YP_002634236.1| DNA repair protein RecN [Staphylococcus carnosus subsp. carnosus TM300] gi|222421237|emb|CAL28051.1| similar to DNA repair protein RecN [Staphylococcus carnosus subsp. carnosus TM300] Length = 559 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I FAD LT+++G+ G GKS + +AI Sbjct: 2 LQTLTIKQF-AIIDELEINFADGLTVLSGETGAGKSIIIDAI 42 >gi|118479365|ref|YP_896516.1| DNA repair protein [Bacillus thuringiensis str. Al Hakam] gi|118418590|gb|ABK87009.1| DNA replication and repair protein RecN [Bacillus thuringiensis str. Al Hakam] Length = 600 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 13 LSKSLTSYYARKLIFK------LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 ++K L R L++ L ++ I +F E I F LT+++G+ G GKS + Sbjct: 1 MNKELRKALNRGLVYNEVNGALLSELSIRNF-AIIESLNISFQKGLTVLSGETGAGKSII 59 Query: 67 SEAIEWLFYGYTQRRKHGDSIKKRSIKTPMP 97 +AI L G R + ++ + K + Sbjct: 60 IDAISLLVGG----RGSAEFVRYGTEKAEIE 86 >gi|70726397|ref|YP_253311.1| DNA repair protein [Staphylococcus haemolyticus JCSC1435] gi|68447121|dbj|BAE04705.1| DNA repair protein [Staphylococcus haemolyticus JCSC1435] Length = 561 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIHFSDGLTVLSGETGSGKSIIIDAI 42 >gi|332881951|ref|ZP_08449592.1| DNA repair protein RecN [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680077|gb|EGJ53033.1| DNA repair protein RecN [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 552 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + K++F + I+ G+ G GKS + +A+ + + + Sbjct: 2 LTALSIKNY-ALIDDLKVDFPEGFIIITGETGSGKSIMLDALSLILGKRADMSALRNKEE 60 Query: 89 KRSIKTPMPM 98 K I+ + Sbjct: 61 KCIIEAEFSL 70 >gi|311740656|ref|ZP_07714483.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304176|gb|EFQ80252.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 861 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHG 84 ++ +E+++ RG + E + + +++G+N GKS++ EA++ + ++ R K Sbjct: 1 MRIHRLELTNVRGIEHLVLDELPETGVVVIHGENEAGKSTIVEALDVVLTEKHSGRSKRI 60 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQLK 110 S++ + + +Y+ + Sbjct: 61 RSLQPVGKDVAPEITAELSVGEYRFR 86 >gi|32476874|ref|NP_869868.1| RecF protein [Rhodopirellula baltica SH 1] gi|32447422|emb|CAD79011.1| putative RecF protein [Rhodopirellula baltica SH 1] Length = 387 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I I+ +R + + + LT+V G NG GK++L ++ Sbjct: 2 IHRIAITGYRSIRSLT-VRLGE-LTVVTGPNGSGKTNLYRSLR 42 >gi|329570680|gb|EGG52397.1| conserved domain protein [Enterococcus faecalis TX1467] Length = 464 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K L + + +F + I+F L +++G+ G GK+++ + + + +G + + Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKL 59 Query: 83 HGDSIKKRSIKTPMP 97 + + P Sbjct: 60 RLGKEMRSTFADPSE 74 >gi|313902118|ref|ZP_07835529.1| hypothetical protein ThesuDRAFT_1632 [Thermaerobacter subterraneus DSM 13965] gi|313467636|gb|EFR63139.1| hypothetical protein ThesuDRAFT_1632 [Thermaerobacter subterraneus DSM 13965] Length = 1241 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 20/50 (40%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + F F + + + L+ N GKS+L + + +G Sbjct: 57 VRWHRLVLRGFGPFRDEVEFRCPEGLSHWVAPNESGKSTLLAGLVAVLFG 106 >gi|313893078|ref|ZP_07826655.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442431|gb|EFR60846.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 557 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I ++R ++ + F + + G+N GKS+ + +E + Sbjct: 1 MYIKWMHIENYRNLADVT-LSFHNDINYFVGENAVGKSNFLDLLEIVM 47 >gi|302545367|ref|ZP_07297709.1| ABC transporter, ATP-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302462985|gb|EFL26078.1| ABC transporter, ATP-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 554 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ + + F E I+ F + + V G NG GK++L + I+ L + K G Sbjct: 322 VEVENLSKAFGEKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETADAGKIKVG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|213962676|ref|ZP_03390937.1| DNA repair protein RecN [Capnocytophaga sputigena Capno] gi|213954671|gb|EEB65992.1| DNA repair protein RecN [Capnocytophaga sputigena Capno] Length = 552 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + K++F + I+ G+ G GKS + +A+ + + + Sbjct: 2 LTSLSIKNY-ALIDDLKVDFPEGFIIITGETGSGKSIMLDALSLILGKRADMASLRNKEE 60 Query: 89 KRSIKTPMPM 98 K I+ + Sbjct: 61 KCVIEAEFSL 70 >gi|88603148|ref|YP_503326.1| hypothetical protein Mhun_1890 [Methanospirillum hungatei JF-1] gi|88188610|gb|ABD41607.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 389 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +++ F+ I F + + G N GKS+ + +L Q D+ Sbjct: 1 MMIKRLLLKNWKNFSS-VDISFQSRM-FIVGPNASGKSNFLDVFRFLHDISKQGGSLFDA 58 Query: 87 IKKRS 91 +++R Sbjct: 59 LERRG 63 >gi|78187714|ref|YP_375757.1| ATP-dependent OLD family endonuclease [Chlorobium luteolum DSM 273] gi|78167616|gb|ABB24714.1| ATP-dependent endonuclease of the OLD family-like protein [Chlorobium luteolum DSM 273] Length = 595 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 ++ L I IS+FR Q+++FA T G N GKS+L AI W Sbjct: 1 MYTLSRISISNFRS---CQQVDFALAAFTPFVGYNNAGKSNLLAAIRWFI 47 >gi|332706943|ref|ZP_08427003.1| DNA replication and repair protein RecN [Lyngbya majuscula 3L] gi|332354208|gb|EGJ33688.1| DNA replication and repair protein RecN [Lyngbya majuscula 3L] Length = 608 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + I +F + ++EF L ++ G+ G GKS + +AI+ G R K Sbjct: 2 LVYLRIHNF-ALIDHLEVEFGAGLNVLTGETGAGKSIILDAIDIALGGKVTNRLIRTGTK 60 Query: 89 K 89 + Sbjct: 61 R 61 >gi|320037006|gb|EFW18944.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 1194 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH----G 84 ++ I++S+F +T + + L +V G NG GKS+L AI Q Sbjct: 116 IVRIKLSNFVTYTSAE-LRPGPRLNLVIGPNGTGKSTLVCAICLGLGEGPQHLGRAKDAA 174 Query: 85 DSIKKRSIKTPMPMCMAVP 103 + IK + + + +A P Sbjct: 175 EYIKHGCREATIEIELAAP 193 >gi|258591122|emb|CBE67417.1| DNA repair protein recN (Recombination protein N) [NC10 bacterium 'Dutch sediment'] Length = 571 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ I++F + ++EF L ++ G+ G GKS + +A+ Sbjct: 2 LRELCITNF-ALIDELRVEFGPGLNVLTGETGAGKSIIIDALGLALG 47 >gi|283833174|ref|ZP_06352915.1| urea ABC transporter, ATP-binding protein UrtD [Citrobacter youngae ATCC 29220] gi|291070805|gb|EFE08914.1| urea ABC transporter, ATP-binding protein UrtD [Citrobacter youngae ATCC 29220] Length = 265 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L I + +F GF + + L + G NG GK++L + I + R Sbjct: 24 VLQLEKINV-NFDGFQALTDLTLNIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGRAI 82 Query: 83 HGDSIKKRSIKT 94 + SI + + Sbjct: 83 YDQSIDLTTFDS 94 >gi|222641073|gb|EEE69205.1| hypothetical protein OsJ_28406 [Oryza sativa Japonica Group] Length = 1039 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + ++K Sbjct: 5 ISRIRLENFMCHSSLH-IELGQHVNFITGQNGSGKSAVLTALCIAFGSRAKSTQRAAALK 63 Query: 89 K 89 Sbjct: 64 D 64 >gi|156040445|ref|XP_001587209.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980] gi|154696295|gb|EDN96033.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1336 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Query: 38 RGFTEI--QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 R F + I F LT++ G NG GK+++ E +++ G Sbjct: 33 RSFDHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTG 73 >gi|59897261|gb|AAX12056.1| probable exonuclease subunit 2 [Enterobacteria phage T5] Length = 622 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ S+ + + I F + +T + G NG GKS+++ IE LFY R D Sbjct: 14 ITIKTLKFSNVMSYGKDIVIHFDKNPVTQLIGGNGLGKSTIATVIEELFYNKNSRGIKKD 73 Query: 86 SI 87 ++ Sbjct: 74 AL 75 >gi|29349663|ref|NP_813166.1| DNA repair protein RecF [Bacteroides thetaiotaomicron VPI-5482] gi|253569966|ref|ZP_04847375.1| DNA replication and repair protein recF [Bacteroides sp. 1_1_6] gi|298383927|ref|ZP_06993488.1| RecF protein [Bacteroides sp. 1_1_14] gi|51316448|sp|Q89ZW6|RECF_BACTN RecName: Full=DNA replication and repair protein recF gi|29341573|gb|AAO79360.1| DNA replication and repair protein RecF, ABC family ATPase [Bacteroides thetaiotaomicron VPI-5482] gi|251840347|gb|EES68429.1| DNA replication and repair protein recF [Bacteroides sp. 1_1_6] gi|298263531|gb|EFI06394.1| RecF protein [Bacteroides sp. 1_1_14] Length = 369 Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E +I F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVEIGFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSSGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|319948138|ref|ZP_08022301.1| AAA ATPase [Dietzia cinnamea P4] gi|319438206|gb|EFV93163.1| AAA ATPase [Dietzia cinnamea P4] Length = 239 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHGDSIKKRSIKTPMPMC 99 D LT++ G+NG GKS++ EA+ F G HG + + ++ P+ Sbjct: 42 DDLTVLVGENGAGKSTIVEAVAMAFGLGAEGGSVHG---RDVTWRSESPLN 89 >gi|301311842|ref|ZP_07217764.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300829944|gb|EFK60592.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 472 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L DI + FR + + I+ + T++ G N GK++L W R I+ Sbjct: 3 LADITLKGFRNYKD-AHIKLEKN-TLIIGANDVGKTNLI----WAMRLLLDRSLSDYDIE 56 Query: 89 KRSIK 93 RS Sbjct: 57 PRSSD 61 >gi|297822949|ref|XP_002879357.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp. lyrata] gi|297325196|gb|EFH55616.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp. lyrata] Length = 1234 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K + F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTG 53 >gi|283852709|ref|ZP_06369974.1| ATPase involved in DNA repair-like protein [Desulfovibrio sp. FW1012B] gi|283571887|gb|EFC19882.1| ATPase involved in DNA repair-like protein [Desulfovibrio sp. FW1012B] Length = 495 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK--HGDS 86 + + + F + A L ++ G N GKS++ EA+ L + HG + Sbjct: 2 ITRLTLLDFMAHA-RTVFDLAPGLNVLTGPNNTGKSAVVEALRCLARNPPPKHVIRHGAT 60 Query: 87 IKKRSIKTPMPMCMA-VPRCKYQL 109 + + +T + V R KY L Sbjct: 61 EARVTAETDDGTTVTWVRRPKYAL 84 >gi|302419513|ref|XP_003007587.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261353238|gb|EEY15666.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 937 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 + +++ +F + E + +L +V G NG GKSSL AI GY+ + Sbjct: 76 IRRVKVENFVTY-ERAEFFPGPNLNMVIGPNGTGKSSLVCAI--CLGLGYSPKHL 127 >gi|218201677|gb|EEC84104.1| hypothetical protein OsI_30422 [Oryza sativa Indica Group] Length = 1039 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + ++K Sbjct: 5 ISRIRLENFMCHSSLH-IELGQHVNFITGQNGSGKSAVLTALCIAFGSRAKSTQRAAALK 63 Query: 89 K 89 Sbjct: 64 D 64 >gi|145296809|ref|YP_001139630.1| hypothetical protein cgR_2712 [Corynebacterium glutamicum R] gi|140846729|dbj|BAF55728.1| hypothetical protein [Corynebacterium glutamicum R] Length = 249 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 21/31 (67%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + Q +EF +T++ G+NG GKS+L EA+ Sbjct: 36 YLHEQPLEFRAPITVITGENGVGKSTLVEAL 66 >gi|21325600|dbj|BAC00221.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum ATCC 13032] Length = 238 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 21/31 (67%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + Q +EF +T++ G+NG GKS+L EA+ Sbjct: 25 YLHEQPLEFRAPITVITGENGVGKSTLVEAL 55 >gi|19554016|ref|NP_602018.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum ATCC 13032] gi|62391664|ref|YP_227066.1| ABC-type transport system, ATPase component [Corynebacterium glutamicum ATCC 13032] gi|41327006|emb|CAF20850.1| ABC-type transport system, ATPase component [Corynebacterium glutamicum ATCC 13032] Length = 240 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 21/31 (67%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + Q +EF +T++ G+NG GKS+L EA+ Sbjct: 27 YLHEQPLEFRAPITVITGENGVGKSTLVEAL 57 >gi|118580982|ref|YP_902232.1| SMC domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503692|gb|ABL00175.1| SMC domain protein [Pelobacter propionicus DSM 2379] Length = 1230 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 6/63 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + ++ + + + G G GK+++ +AI YG T R Sbjct: 1 MKILRLSFRNLNSLAGDWDLDLTHPAYVSSGIFAITGPTGAGKTTILDAICLALYGQTPR 60 Query: 81 RKH 83 Sbjct: 61 LGR 63 >gi|312622197|ref|YP_004023810.1| SMC domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202664|gb|ADQ45991.1| SMC domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 631 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + +FR F +I + LT++ G+N GKSS + +F + +K Sbjct: 4 VYISKVVVENFRCFKG-TEIGLEEDLTLIVGENDSGKSSFLDVFRIIFSVNNKAKKQDKK 62 Query: 87 IK 88 ++ Sbjct: 63 LE 64 >gi|258517016|ref|YP_003193238.1| hypothetical protein Dtox_3922 [Desulfotomaculum acetoxidans DSM 771] gi|257780721|gb|ACV64615.1| hypothetical protein Dtox_3922 [Desulfotomaculum acetoxidans DSM 771] Length = 440 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLS 67 + ++ +EI+ F+ K+ F+ ++I+ G+NG GK++L Sbjct: 1 MIRINRVEITGFKDPIRDIKVNFSTYPISIIYGENGCGKTTLL 43 >gi|296127643|ref|YP_003634895.1| DNA repair protein RecN [Brachyspira murdochii DSM 12563] gi|296019459|gb|ADG72696.1| DNA repair protein RecN [Brachyspira murdochii DSM 12563] Length = 574 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L +EI +F + KI F+ ++ G+ G GKS + A+E + R G + Sbjct: 2 LKYLEIRNF-VLIDKLKINFSSGFNVLTGETGAGKSIIISALELITGEKGSIRMVGSN 58 >gi|212638792|ref|YP_002315312.1| DNA repair ATPase [Anoxybacillus flavithermus WK1] gi|212560272|gb|ACJ33327.1| ATPase involved in DNA repair [Anoxybacillus flavithermus WK1] Length = 576 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSLSFEKGLTVLTGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGETKAEIE 65 >gi|51512066|gb|AAU05265.1| probable exonuclease subunit 2 [Enterobacteria phage T5] Length = 612 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ S+ + + I F + +T + G NG GKS+++ IE LFY R D Sbjct: 4 ITIKTLKFSNVMSYGKDIVIHFDKNPVTQLIGGNGLGKSTIATVIEELFYNKNSRGIKKD 63 Query: 86 SI 87 ++ Sbjct: 64 AL 65 >gi|147673450|ref|YP_001217887.1| hypothetical protein VC0395_A1963 [Vibrio cholerae O395] gi|5830765|emb|CAB54591.1| putative ATP binding protein [Vibrio cholerae] gi|146315333|gb|ABQ19872.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 265 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L +I + ++ F++++ + TI+ G NG GKS++ E+I Sbjct: 62 IRLRNISLYDYKKFSKLKFTSSEKNTTIIIGNNGSGKSTILESISKCL 109 >gi|332524181|ref|ZP_08400408.1| AAA ATPase [Rubrivivax benzoatilyticus JA2] gi|332107517|gb|EGJ08741.1| AAA ATPase [Rubrivivax benzoatilyticus JA2] Length = 429 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I++ + +GF E T+ G NG GKS+L +AI G Sbjct: 1 MYIDRIQLRNVKGF-EKLSFNLVRPGGSHAGWTVFTGDNGAGKSTLLKAIALGLVGREVA 59 Query: 81 RKHGDSIKK 89 R ++++ Sbjct: 60 RSLQPNLQR 68 >gi|330835986|ref|YP_004410627.1| DNA replication and repair protein recF [Spirochaeta coccoides DSM 17374] gi|329747889|gb|AEC01245.1| DNA replication and repair protein recF [Spirochaeta coccoides DSM 17374] Length = 359 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L ++I FR ++ ++ G+NG GK++ EA+ L YG + R Sbjct: 1 MRILSLDIHCFRNIR-KASVDTDARSVMLVGENGQGKTNFLEALYVLCYGTSFR 53 >gi|326427583|gb|EGD73153.1| hypothetical protein PTSG_04865 [Salpingoeca sp. ATCC 50818] Length = 1087 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Query: 29 LLDIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAI 70 + + I R + IEF +T++ G NG GK++ + + Sbjct: 4 VEKLLIKGVRSYDPESHQVIEFLHPMTVIIGANGCGKTTKLDRL 47 >gi|260774539|ref|ZP_05883452.1| DNA recombination and repair protein RecF [Vibrio metschnikovii CIP 69.14] gi|260610445|gb|EEX35651.1| DNA recombination and repair protein RecF [Vibrio metschnikovii CIP 69.14] Length = 359 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR + + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLTRLVVQQFRNIKACD-MTLSSGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|254796587|ref|YP_003081423.1| putative DNA replication and repair protein RecF [Neorickettsia risticii str. Illinois] gi|254589828|gb|ACT69190.1| putative DNA replication and repair protein RecF [Neorickettsia risticii str. Illinois] Length = 349 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ + FR F ++ G+NG GK+S+ EAI L G R + Sbjct: 4 YITEVLLKDFRNHAFWTA-SFECRHVLLCGKNGAGKTSILEAISKLSPGLGLRSASNTEM 62 Query: 88 KKRSI 92 + Sbjct: 63 IRSGS 67 >gi|254416395|ref|ZP_05030148.1| ABC transporter, ATP-binding protein [Microcoleus chthonoplastes PCC 7420] gi|196176833|gb|EDX71844.1| ABC transporter, ATP-binding protein [Microcoleus chthonoplastes PCC 7420] Length = 379 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 13/79 (16%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I + D+ +S F GF + + F+ L ++ G NG GK++ + I L Sbjct: 5 ILAIEDLTVS-FDGFKALNTLNFSMDTGELRVIIGPNGAGKTTFLDVITGKVQPTRGRVL 63 Query: 74 FYGYTQRRKHGDSIKKRSI 92 F G RRK D I + I Sbjct: 64 FKGRNLRRKSEDVIVRMGI 82 >gi|158334047|ref|YP_001515219.1| urea/ branched-chain amino acid ABC transporter ATP-binding protein [Acaryochloris marina MBIC11017] gi|158304288|gb|ABW25905.1| urea/ branched-chain amino acid ABC transporter, ATP-binding protein [Acaryochloris marina MBIC11017] Length = 251 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 17/95 (17%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I ++ ++ +S F GF + ++ F+ L ++ G NG GK++ + I L Sbjct: 5 ILEIENLTVS-FEGFKALNQLNFSMDTGELRVIIGPNGAGKTTFLDVITGKVQPTTGRAL 63 Query: 74 FYGYTQRRKHGDSIKKRSI----KTPMPMCMAVPR 104 F G R + +I + I +TP PR Sbjct: 64 FKGKNLRSRSEHNISRLGIGRKFQTPRVYLQLTPR 98 >gi|92113276|ref|YP_573204.1| SMC protein-like protein [Chromohalobacter salexigens DSM 3043] gi|91796366|gb|ABE58505.1| SMC protein-like protein [Chromohalobacter salexigens DSM 3043] Length = 1101 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + +++ +++F L + G G GKS+L +A+ YG T R Sbjct: 1 MKILALRLANLASIPGPLELDFTAAPLRDAGLFAITGPTGAGKSTLLDALCLALYGGTPR 60 >gi|70606991|ref|YP_255861.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] gi|68567639|gb|AAY80568.1| ABC transporter [Sulfolobus acidocaldarius DSM 639] Length = 219 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + IE +T++ G NG GK++L + I Sbjct: 17 DNVNIELRPGITLILGPNGSGKTTLLKTI 45 >gi|93004836|ref|YP_579273.1| DNA replication and repair protein RecF [Psychrobacter cryohalolentis K5] gi|92392514|gb|ABE73789.1| DNA replication and repair protein RecF [Psychrobacter cryohalolentis K5] Length = 402 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++ISH R I + ++ G NG GK+SL EAI L G + R Sbjct: 2 IERLQISHLRNL---THINLSPAACNVIIGANGSGKTSLLEAIFLLSRGKSFR 51 >gi|332533042|ref|ZP_08408912.1| exonuclease SbcC [Pseudoalteromonas haloplanktis ANT/505] gi|332037521|gb|EGI73974.1| exonuclease SbcC [Pseudoalteromonas haloplanktis ANT/505] Length = 1216 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I + + + I+F L + G G GKS+ +AI Y T Sbjct: 1 MKITAVRIHNLASIVDAE-IDFTQAPLKDAGLFAITGDTGAGKSTFLDAICLALYTKTA- 58 Query: 81 RKHGDS 86 R GD Sbjct: 59 RLRGDK 64 >gi|325922072|ref|ZP_08183869.1| hypothetical protein XGA_2885 [Xanthomonas gardneri ATCC 19865] gi|325547456|gb|EGD18513.1| hypothetical protein XGA_2885 [Xanthomonas gardneri ATCC 19865] Length = 691 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++ +EI +FR + + T++ G+N GK+S++E L T Sbjct: 1 MRIKHVEIENFRLLR-KVSVGLEERTTLIVGRNNSGKTSIAELFRRLLSERT 51 >gi|325279482|ref|YP_004252024.1| DNA repair protein RecN [Odoribacter splanchnicus DSM 20712] gi|324311291|gb|ADY31844.1| DNA repair protein RecN [Odoribacter splanchnicus DSM 20712] Length = 555 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I I+++ + IE +++ G+ G GKS L AI D K Sbjct: 2 IENISINNY-ALIDHTHIELEKGFSVITGETGAGKSILLGAIGLTLGQRADSSAIMDKTK 60 Query: 89 KRSIKTP 95 K ++ Sbjct: 61 KCIVEIE 67 >gi|313890995|ref|ZP_07824616.1| ABC transporter, ATP-binding protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120619|gb|EFR43737.1| ABC transporter, ATP-binding protein [Streptococcus pseudoporcinus SPIN 20026] Length = 465 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Query: 30 LDIEISHFRGFTEIQKI-----EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I HF+ + I F + + GQNG GKS+ + G + G Sbjct: 272 ESITCLHFKKTYDKNTIFDFSVSFNTGINFIIGQNGVGKSTFINLLMGTIKGKGEVFYKG 331 Query: 85 DSIKKR 90 + +KKR Sbjct: 332 EKLKKR 337 >gi|309365041|emb|CAP23745.2| CBR-SMC-6 protein [Caenorhabditis briggsae AF16] Length = 1152 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +++ +F +Q I+F ++ + G NG GKS+L AI G G Sbjct: 49 RVASVKLQNFMCHANLQ-IDFNTKQNNCFYIGGPNGSGKSALFAAINLGLGGRGSDNDRG 107 Query: 85 DSIK 88 ++K Sbjct: 108 STVK 111 >gi|253752338|ref|YP_003025479.1| DNA repair protein [Streptococcus suis SC84] gi|253754164|ref|YP_003027305.1| DNA repair protein [Streptococcus suis P1/7] gi|253756098|ref|YP_003029238.1| DNA repair protein [Streptococcus suis BM407] gi|302024289|ref|ZP_07249500.1| DNA repair protein [Streptococcus suis 05HAS68] gi|330833275|ref|YP_004402100.1| putative DNA repair protein [Streptococcus suis ST3] gi|251816627|emb|CAZ52267.1| putative DNA repair protein [Streptococcus suis SC84] gi|251818562|emb|CAZ56395.1| putative DNA repair protein [Streptococcus suis BM407] gi|251820410|emb|CAR47043.1| putative DNA repair protein [Streptococcus suis P1/7] gi|319758739|gb|ADV70681.1| putative DNA repair protein [Streptococcus suis JS14] gi|329307498|gb|AEB81914.1| putative DNA repair protein [Streptococcus suis ST3] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F E + F + +TI++G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEVSIKNF-AIIEQVSLNFENGMTILSGETGAGKSIIIDAMNLMLG----ARATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGAAKAEIE 65 >gi|261417074|ref|YP_003250757.1| SMC domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373530|gb|ACX76275.1| SMC domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326883|gb|ADL26084.1| conserved hypothetical protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 427 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR----R 81 ++ + I +FRG + ++F++ + + G NG GK+++ A+++LF Y R + Sbjct: 1 MRVKKLRIENFRGIKNLD-LDFSNSKMVVFAGINGAGKTTVLVAMQFLFSWYVARLKSPK 59 Query: 82 KHGDSIKKRSIKTPMP 97 G S+ I P Sbjct: 60 GKGLSLSDCDITNGEP 75 >gi|228992921|ref|ZP_04152845.1| DNA repair protein recN [Bacillus pseudomycoides DSM 12442] gi|228998965|ref|ZP_04158547.1| DNA repair protein recN [Bacillus mycoides Rock3-17] gi|228760582|gb|EEM09546.1| DNA repair protein recN [Bacillus mycoides Rock3-17] gi|228766778|gb|EEM15417.1| DNA repair protein recN [Bacillus pseudomycoides DSM 12442] Length = 583 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIESLNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229006502|ref|ZP_04164148.1| DNA repair protein recN [Bacillus mycoides Rock1-4] gi|228754747|gb|EEM04146.1| DNA repair protein recN [Bacillus mycoides Rock1-4] Length = 447 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIESLNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229086748|ref|ZP_04218914.1| DNA repair protein recN [Bacillus cereus Rock3-44] gi|228696569|gb|EEL49388.1| DNA repair protein recN [Bacillus cereus Rock3-44] Length = 583 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIESLNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|227502605|ref|ZP_03932654.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium accolens ATCC 49725] gi|227076645|gb|EEI14608.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium accolens ATCC 49725] Length = 267 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Query: 43 IQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 ++F T + G NG GKS+L A+ + Sbjct: 31 NVSVDFPRGKFTCIIGPNGCGKSTLLRAVARVL 63 >gi|220905722|ref|YP_002481033.1| ABC transporter ATP-binding protein [Cyanothece sp. PCC 7425] gi|219862333|gb|ACL42672.1| ABC transport protein, ATP-binding subunit [Cyanothece sp. PCC 7425] Length = 382 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAI 70 +L I I FR +Q ++ +LT++ G NG GK+S +A+ Sbjct: 3 RLESISIKGFR---RLQHVDLEMRNLTVMIGANGAGKTSFLDAL 43 >gi|169622619|ref|XP_001804718.1| hypothetical protein SNOG_14536 [Phaeosphaeria nodorum SN15] gi|160704810|gb|EAT78076.2| hypothetical protein SNOG_14536 [Phaeosphaeria nodorum SN15] Length = 990 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F E + + + G NG GKS++ A+ G ++K Sbjct: 28 IEEIQCINFMCH-EHLTVTLGPLINFIIGHNGSGKSAVLTALTICLGGKATATNRAQNLK 86 >gi|152976578|ref|YP_001376095.1| DNA repair protein RecN [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025330|gb|ABS23100.1| DNA repair protein RecN [Bacillus cytotoxicus NVH 391-98] Length = 579 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIESLNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|126738625|ref|ZP_01754330.1| recombination protein F [Roseobacter sp. SK209-2-6] gi|126720424|gb|EBA17130.1| recombination protein F [Roseobacter sp. SK209-2-6] Length = 375 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + +SHFR ++ + G NG GK+++ EA+ G RR + Sbjct: 14 LTSLTLSHFRSHL-RAEMHLDGRPVALFGANGAGKTNILEAVSLFSPGRGIRRASAAEMT 72 Query: 89 KR 90 +R Sbjct: 73 RR 74 >gi|146311644|ref|YP_001176718.1| ABC transporter related [Enterobacter sp. 638] gi|145318520|gb|ABP60667.1| ABC transporter related protein [Enterobacter sp. 638] Length = 265 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L I + +F GF + + L V G NG GK++L + I + R Sbjct: 24 VLQLESINV-NFDGFQALTDLSLNIGVGELRCVIGPNGAGKTTLMDVITGKTRPQSGRAI 82 Query: 83 HGDSIKKRSIK 93 + SI + Sbjct: 83 YDQSIDLTGLD 93 >gi|223932929|ref|ZP_03624924.1| DNA repair protein RecN [Streptococcus suis 89/1591] gi|223898375|gb|EEF64741.1| DNA repair protein RecN [Streptococcus suis 89/1591] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F E + F + +TI++G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEVSIKNF-AIIEQVSLNFENGMTILSGETGAGKSIIIDAMNLMLG----ARATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGAAKAEIE 65 >gi|322434427|ref|YP_004216639.1| hypothetical protein AciX9_0790 [Acidobacterium sp. MP5ACTX9] gi|321162154|gb|ADW67859.1| hypothetical protein AciX9_0790 [Acidobacterium sp. MP5ACTX9] Length = 659 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL+ I +FR + ++ +T++ GQN GK+ +A+ Sbjct: 1 MKLIKARIINFRSIEDSNDVQIEPTVTVLVGQNDSGKTGFLQAL 44 >gi|261820281|ref|YP_003258387.1| recombination and repair protein [Pectobacterium wasabiae WPP163] gi|261604294|gb|ACX86780.1| DNA repair protein RecN [Pectobacterium wasabiae WPP163] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|253687128|ref|YP_003016318.1| DNA repair protein RecN [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753706|gb|ACT11782.1| DNA repair protein RecN [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|251793004|ref|YP_003007730.1| HmcB [Aggregatibacter aphrophilus NJ8700] gi|247534397|gb|ACS97643.1| HmcB [Aggregatibacter aphrophilus NJ8700] Length = 237 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 19/25 (76%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAI 70 +EF +TI+ G+NG GKS+L EAI Sbjct: 27 LEFNHPITIITGENGSGKSTLLEAI 51 >gi|227328445|ref|ZP_03832469.1| recombination and repair protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|227113542|ref|ZP_03827198.1| recombination and repair protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|156055804|ref|XP_001593826.1| hypothetical protein SS1G_05254 [Sclerotinia sclerotiorum 1980] gi|154703038|gb|EDO02777.1| hypothetical protein SS1G_05254 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1130 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +++++F + + +L +V G NG GKSSL A+ + D + Sbjct: 80 IVRVKLNNFVTYESAEFFP-GPNLNMVIGPNGTGKSSLVCALCLGLGSSPKHLGRADKV 137 >gi|50119783|ref|YP_048950.1| recombination and repair protein [Pectobacterium atrosepticum SCRI1043] gi|49610309|emb|CAG73753.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043] Length = 553 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQSGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|86142885|ref|ZP_01061307.1| DNA replication and repair protein RecF, ABC family ATPase [Leeuwenhoekiella blandensis MED217] gi|85830330|gb|EAQ48789.1| DNA replication and repair protein RecF, ABC family ATPase [Leeuwenhoekiella blandensis MED217] Length = 359 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +++ F E + + G NG GK+++ +A+ L +G + Sbjct: 3 LKALSLINYKNF-ESISFDLDAKINCFVGNNGVGKTNVLDAVYHLSFGKS 51 >gi|319942917|ref|ZP_08017200.1| ATPase [Lautropia mirabilis ATCC 51599] gi|319743459|gb|EFV95863.1| ATPase [Lautropia mirabilis ATCC 51599] Length = 390 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------FYGYTQ 79 ++ I+I ++R F ++ L + G NG GKS+L + +L Sbjct: 1 MQIESIKIQNYRTFR-HAHLDGLPRLVTLVGANGTGKSTLFDVFSFLKDALAHNVGKAVA 59 Query: 80 RRKHGDSIKKRSIKTP 95 RR ++ R + P Sbjct: 60 RRGSMRELRSRDQRGP 75 >gi|310286523|ref|YP_003937781.1| replication and repair protein recF [Bifidobacterium bifidum S17] gi|309250459|gb|ADO52207.1| replication and repair protein recF [Bifidobacterium bifidum S17] Length = 420 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + I+ G NG GK+++ EAIE L G + R Sbjct: 2 LDLTPGINILQGANGLGKTNIVEAIEVLSTGLSHR 36 >gi|310639966|ref|YP_003944724.1| smc protein-like protein [Paenibacillus polymyxa SC2] gi|309244916|gb|ADO54483.1| SMC protein-like protein [Paenibacillus polymyxa SC2] Length = 253 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 22/35 (62%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + +++F +T + G+NG GKS+L EAI Sbjct: 29 NLKALQQWNELKFHPSVTYIVGENGVGKSTLMEAI 63 >gi|224283954|ref|ZP_03647276.1| Recombinational DNA repair ATPase [Bifidobacterium bifidum NCIMB 41171] gi|313141106|ref|ZP_07803299.1| recombination protein RecF [Bifidobacterium bifidum NCIMB 41171] gi|313133616|gb|EFR51233.1| recombination protein RecF [Bifidobacterium bifidum NCIMB 41171] Length = 420 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ + I+ G NG GK+++ EAIE L G + R Sbjct: 2 LDLTPGINILQGANGLGKTNIVEAIEVLSTGLSHR 36 >gi|39995113|ref|NP_951064.1| recombination protein F [Geobacter sulfurreducens PCA] gi|81703762|sp|Q74H90|RECF_GEOSL RecName: Full=DNA replication and repair protein recF gi|39981875|gb|AAR33337.1| recF protein [Geobacter sulfurreducens PCA] gi|307634642|gb|ADI82866.2| DNA replication and repair protein RecF [Geobacter sulfurreducens KN400] Length = 365 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L I IS FR + +I F +++G NG GK+S+ EAI Sbjct: 1 MHLNAIAISAFRNI-DHVEISFDRRFNVLHGANGQGKTSVLEAI 43 >gi|114321461|ref|YP_743144.1| hypothetical protein Mlg_2314 [Alkalilimnicola ehrlichii MLHE-1] gi|114227855|gb|ABI57654.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1] Length = 376 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L ++ + I FR ++ +E L ++ G NG GKS+L E L Y R Sbjct: 7 LCSRISRVSIRGFRSLACVENLEL-PQLAVLIGANGSGKSNLIRFFEMLSYSLKGRNLQ 64 >gi|326633012|ref|YP_004306601.1| putative exonuclease subunit 2 [Enterobacteria phage SPC35] gi|321272206|gb|ADW80098.1| putative exonuclease subunit 2 [Enterobacteria phage SPC35] Length = 612 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ S+ + + I F + +T + G NG GKS+++ IE LFY R D Sbjct: 4 ITIKTLKFSNVMSYGKDIVIHFDKNPVTQLIGGNGLGKSTIATVIEELFYNKNSRGIKKD 63 Query: 86 SI 87 ++ Sbjct: 64 AL 65 >gi|238798384|ref|ZP_04641866.1| hypothetical protein ymoll0001_19630 [Yersinia mollaretii ATCC 43969] gi|238717769|gb|EEQ09603.1| hypothetical protein ymoll0001_19630 [Yersinia mollaretii ATCC 43969] Length = 575 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +EI +FR ++ + L + G GKS++ +AI+ + Sbjct: 4 VRHLEIENFRSIKKLVWCP-SPGLNCLIGTGDSGKSTILDAIDLCLGARRSYSFNDADFF 62 Query: 89 KRSIKTP 95 K ++ +P Sbjct: 63 KSNVNSP 69 >gi|15485436|emb|CAC67530.1| putative ATP/GTP-binding protein [Streptococcus thermophilus] Length = 573 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 28 KLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L ++I +++ + E D+ I+ GQN GKS+L ++IE L G R ++ Sbjct: 3 YLKSLKIKNYKHIGDSYVGFEKIDNFNILVGQNNIGKSTLLQSIELLISGNDSNRYITEN 62 Query: 87 IKKRSIKTPMP 97 K R P Sbjct: 63 TKVRFSFCPEE 73 >gi|46401864|ref|YP_006956.1| putative recombination endonuclease, subunit D13 [Enterobacteria phage T5] gi|119683|sp|P11109|EXO2_BPT5 RecName: Full=Probable exonuclease subunit 2; AltName: Full=D13 gi|45775042|gb|AAS77174.1| putative recombination endonuclease, subunit D13 [Enterobacteria phage T5] Length = 612 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ S+ + + I F + +T + G NG GKS+++ IE LFY R D Sbjct: 4 ITIKTLKFSNVMSYGKDIVIHFDKNPVTQLIGGNGLGKSTIATVIEELFYNKNSRGIKKD 63 Query: 86 SI 87 ++ Sbjct: 64 AL 65 >gi|330817980|ref|YP_004361685.1| hypothetical protein bgla_1g31210 [Burkholderia gladioli BSR3] gi|327370373|gb|AEA61729.1| hypothetical protein bgla_1g31210 [Burkholderia gladioli BSR3] Length = 395 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ IEI +FR F ++ L ++ G NG GK++L + +L Sbjct: 1 MQIEFIEIKNFRLFR-NTRLTNIPRLCVLVGANGTGKTTLFDVFSFL 46 >gi|323343966|ref|ZP_08084193.1| recombination protein F [Prevotella oralis ATCC 33269] gi|323095785|gb|EFZ38359.1| recombination protein F [Prevotella oralis ATCC 33269] Length = 372 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I ++R + + + + + G NG GK++ +A+ +L + + Sbjct: 3 LRKISILNYRNIRD-VSLTLSPKINCLIGHNGVGKTNFLDAVYYLSFCRSA 52 >gi|294637008|ref|ZP_06715327.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] gi|291089792|gb|EFE22353.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] Length = 554 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 F++ L ++G N GKSSL +++ + G + DS KK+ I T + + Sbjct: 21 TFNFSEGLNFIHGTNDTGKSSLIKSLYFCLGGDLR---LDDSWKKQEIITKLTL 71 >gi|289164295|ref|YP_003454433.1| hypothetical protein LLO_0948 [Legionella longbeachae NSW150] gi|288857468|emb|CBJ11296.1| hypothetical protein LLO_0948 [Legionella longbeachae NSW150] Length = 581 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +L I I +FR +IE D + ++ G N GKSS+ A E + Sbjct: 23 RLHKIIIQNFRSIGNIPIEIELDD-IVVLVGPNNAGKSSILRAYEIVM 69 >gi|258645185|ref|ZP_05732654.1| conserved hypothetical protein [Dialister invisus DSM 15470] gi|260402534|gb|EEW96081.1| conserved hypothetical protein [Dialister invisus DSM 15470] Length = 543 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + D+ I ++R F ++ F + G N GKS+ ++ + +GY R Sbjct: 1 MYISDVRIENYRTFQDVT-FHFDSRANYIVGDNNIGKSNFLSFLKTVTHGYGFR 53 >gi|242814543|ref|XP_002486389.1| DNA repair protein Rad18, putative [Talaromyces stipitatus ATCC 10500] gi|218714728|gb|EED14151.1| DNA repair protein Rad18, putative [Talaromyces stipitatus ATCC 10500] Length = 1139 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E ++ + + G+NG GKS++ A+ G S+K Sbjct: 99 IERVDCFNFMCH-EHFSVDLGPLINFIVGKNGSGKSAILTALTLCLGAKASVTNRGQSLK 157 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 158 -SFIKEGKESATIIVRIKNQ 176 >gi|254172927|ref|ZP_04879601.1| RecF/RecN/SMC N terminal domain, putative [Thermococcus sp. AM4] gi|214033083|gb|EEB73911.1| RecF/RecN/SMC N terminal domain, putative [Thermococcus sp. AM4] Length = 429 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 +L + + +F+ + + IE + ++ G N GK++L E Sbjct: 1 MRLKKLVVKNFKSLRDCE-IEL-NKFNVLIGPNASGKTNLVE 40 >gi|169344200|ref|ZP_02865182.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169297658|gb|EDS79758.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 922 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R ++ Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK-TLS 60 Query: 89 KRSIKTPM 96 RS TP+ Sbjct: 61 DRSKYTPL 68 >gi|149195222|ref|ZP_01872312.1| SMC domain protein [Caminibacter mediatlanticus TB-2] gi|149134655|gb|EDM23141.1| SMC domain protein [Caminibacter mediatlanticus TB-2] Length = 100 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ +++ + F +I+F L +++G G GK+++ ++I Y T R + Sbjct: 1 MRIKKLKLKNINSFKGEFEIDFEKFSGKLFLISGPTGSGKTTIIDSILASLYHKTPRLSN 60 Query: 84 GDSI 87 ++ Sbjct: 61 QVNM 64 >gi|94502203|ref|ZP_01308698.1| recombination protein F [Oceanobacter sp. RED65] gi|94425664|gb|EAT10677.1| recombination protein F [Oceanobacter sp. RED65] Length = 357 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + R + + + + ++ G+NG GK+S EAI +L Y + R + Sbjct: 1 MAIELLMLQGVRNLS-PTNVSPSPLVNLIYGENGSGKTSFLEAIYYLAYCKSFRTHKQKN 59 Query: 87 IKKRSIKTPMPMC 99 + + T C Sbjct: 60 LIQHGQNTMTGFC 72 >gi|88195071|ref|YP_499871.1| hypothetical protein SAOUHSC_01342 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87202629|gb|ABD30439.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 947 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|238794344|ref|ZP_04637956.1| Transcriptional regulator, Fis family [Yersinia intermedia ATCC 29909] gi|238726338|gb|EEQ17880.1| Transcriptional regulator, Fis family [Yersinia intermedia ATCC 29909] Length = 634 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I IS F+ F +++T + G NG GK++ +A+ Sbjct: 1 MELEVIRISGFQSFGPELTEVSLENITYLIGPNGSGKTATLQAL 44 >gi|283456010|ref|YP_003360574.1| ABC transporter ATP-binding protein [Bifidobacterium dentium Bd1] gi|283102644|gb|ADB09750.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium Bd1] Length = 212 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 + ++ F ++T + G+NG GKS+L EAI + + + + + + Sbjct: 26 SLRSLDELGFHKNITFLVGENGSGKSTLLEAIAVVCGFNAEGGTR--NYRFSTYDDTSDL 83 Query: 99 CMAV 102 A+ Sbjct: 84 AEAM 87 >gi|251788305|ref|YP_003003026.1| DNA replication and repair protein RecF [Dickeya zeae Ech1591] gi|247536926|gb|ACT05547.1| DNA replication and repair protein RecF [Dickeya zeae Ech1591] Length = 333 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +E+ + F E K +F + + + G+NG GK+ + + L Y Q+ + D + K+ Sbjct: 4 TLELENLGAFKE-AKFDFTNGINVFIGENGTGKTHVMK----LLYCLQQQGGNKDLLYKK 58 Query: 91 SIKTPMPMCMAVPR 104 P V R Sbjct: 59 IANVFRPAKGDVSR 72 >gi|256820672|ref|YP_003141951.1| Sigma 54 interacting domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256582255|gb|ACU93390.1| Sigma 54 interacting domain protein [Capnocytophaga ochracea DSM 7271] Length = 552 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + K++F I+ G+ G GKS + +A+ + + + Sbjct: 2 LNTLSIKNY-ALIDDLKVDFPKGFIIITGETGSGKSIMLDALSLVLGKRADMSALRNKDE 60 Query: 89 KRSIKTPMPM 98 K I+ + Sbjct: 61 KCVIEAEFSL 70 >gi|218438584|ref|YP_002376913.1| ATPase [Cyanothece sp. PCC 7424] gi|218171312|gb|ACK70045.1| ATPase [Cyanothece sp. PCC 7424] Length = 368 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 27 FKLLDIEISHFR-------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ I I +F+ F E +D ++ G NG GK++L +AI Sbjct: 1 MKVESISIQNFKRFDNLEVSFKNKTLNEVSDRF-LILGDNGSGKTTLLQAI 50 >gi|171742971|ref|ZP_02918778.1| hypothetical protein BIFDEN_02094 [Bifidobacterium dentium ATCC 27678] gi|171278585|gb|EDT46246.1| hypothetical protein BIFDEN_02094 [Bifidobacterium dentium ATCC 27678] Length = 221 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 + ++ F ++T + G+NG GKS+L EAI + + + + + + Sbjct: 35 SLRSLDELGFHKNITFLVGENGSGKSTLLEAIAVVCGFNAEGGTR--NYRFSTYDDTSDL 92 Query: 99 CMAV 102 A+ Sbjct: 93 AEAM 96 >gi|170719178|ref|YP_001784321.1| DNA repair protein RecN [Haemophilus somnus 2336] gi|168827307|gb|ACA32678.1| DNA repair protein RecN [Haemophilus somnus 2336] Length = 559 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + I++F IEFA ++++ G+ G GKS +A+ T+ D + Sbjct: 2 LVQLTINNF-AIVHHLDIEFAKGMSVITGETGAGKSIAIDALGLCLGQRTELSMLRDGQE 60 Query: 89 K 89 + Sbjct: 61 R 61 >gi|113460796|ref|YP_718863.1| DNA repair protein [Haemophilus somnus 129PT] gi|112822839|gb|ABI24928.1| DNA replication and repair protein RecN [Haemophilus somnus 129PT] Length = 559 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ + I++F IEFA ++++ G+ G GKS +A+ T+ D + Sbjct: 2 LVQLTINNF-AIVHHLDIEFAKGMSVITGETGAGKSIAIDALGLCLGQRTELSMLRDGQE 60 Query: 89 K 89 + Sbjct: 61 R 61 >gi|315187267|gb|EFU21023.1| hypothetical protein SpithDRAFT_0020 [Spirochaeta thermophila DSM 6578] Length = 716 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I + F F+E + E +T+ +G N GKS++ +A+ Sbjct: 1 MRLRGIRLIGFGKFSE-VRFELGP-VTVFHGPNEAGKSTVCDAL 42 >gi|307719853|ref|YP_003875385.1| hypothetical protein STHERM_c21830 [Spirochaeta thermophila DSM 6192] gi|306533578|gb|ADN03112.1| hypothetical protein STHERM_c21830 [Spirochaeta thermophila DSM 6192] Length = 716 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I + F F+E + E +T+ +G N GKS++ +A+ Sbjct: 1 MRLRGIRLIGFGKFSE-VRFELGP-VTVFHGPNEAGKSTVCDAL 42 >gi|299146317|ref|ZP_07039385.1| putative nuclease sbcCD, subunit C [Bacteroides sp. 3_1_23] gi|298516808|gb|EFI40689.1| putative nuclease sbcCD, subunit C [Bacteroides sp. 3_1_23] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|298483728|ref|ZP_07001902.1| nuclease sbcCD subunit C [Bacteroides sp. D22] gi|298270145|gb|EFI11732.1| nuclease sbcCD subunit C [Bacteroides sp. D22] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFTAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|293373534|ref|ZP_06619886.1| exonuclease SbcCD, C subunit [Bacteroides ovatus SD CMC 3f] gi|292631498|gb|EFF50124.1| exonuclease SbcCD, C subunit [Bacteroides ovatus SD CMC 3f] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|284052395|ref|ZP_06382605.1| hypothetical protein AplaP_13088 [Arthrospira platensis str. Paraca] Length = 382 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + ++R F +++ D + + G N GKS+ +A +L Sbjct: 3 ISYIILKNWRNFRA-VEVDLCDRI-FIVGPNACGKSNFLDAFRFL 45 >gi|260170997|ref|ZP_05757409.1| ATP-dependent exonuclease sbcC [Bacteroides sp. D2] gi|315919318|ref|ZP_07915558.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693193|gb|EFS30028.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|237722285|ref|ZP_04552766.1| ATP-dependent exonuclease sbcC [Bacteroides sp. 2_2_4] gi|229448095|gb|EEO53886.1| ATP-dependent exonuclease sbcC [Bacteroides sp. 2_2_4] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|157311335|ref|YP_001469378.1| endonuclease subunit [Enterobacteria phage Phi1] gi|149380539|gb|ABR24544.1| gp46 recombination endonuclease subunit [Enterobacteria phage Phi1] Length = 560 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 13/66 (19%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +I++ F+ T++ G NG GKS++ EA+ ++ +G R + Sbjct: 23 EIQLDGFKK-------------TLITGVNGAGKSTMIEALCFVLFGKPFRSIKKGQLINS 69 Query: 91 SIKTPM 96 K + Sbjct: 70 VHKKKL 75 >gi|160882444|ref|ZP_02063447.1| hypothetical protein BACOVA_00395 [Bacteroides ovatus ATCC 8483] gi|156112156|gb|EDO13901.1| hypothetical protein BACOVA_00395 [Bacteroides ovatus ATCC 8483] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|78188127|ref|YP_378465.1| ATPase [Chlorobium chlorochromatii CaD3] gi|78170326|gb|ABB27422.1| ATPase [Chlorobium chlorochromatii CaD3] Length = 565 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+I +FR + Q +E + +V G N GK++L +AI G + K Sbjct: 2 ITKIQIKNFRQIRD-QTLELK-QVAVVIGPNNGGKTTLLQAISLFALGLRAWGMQRINKK 59 Query: 89 KRSIK 93 ++ K Sbjct: 60 SKAQK 64 >gi|328851225|gb|EGG00382.1| hypothetical protein MELLADRAFT_118060 [Melampsora larici-populina 98AG31] Length = 1110 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ +F + ++F+ + G NG GKS++ I G S+K Sbjct: 76 IEQLEVFNFMCH-DYLSMDFSPQANFIIGNNGSGKSAILTGIMLALGGKASTTSRATSLK 134 Query: 89 K--RSIKTPMPMCMAVPRC 105 + K+ + + + C Sbjct: 135 GFIQHHKSRAEIKLQMSNC 153 >gi|329732954|gb|EGG69298.1| hypothetical protein SA21193_1300 [Staphylococcus aureus subsp. aureus 21193] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|329730914|gb|EGG67290.1| exonuclease SbcCD, C subunit [Staphylococcus aureus subsp. aureus 21189] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|330819124|ref|XP_003291614.1| hypothetical protein DICPUDRAFT_39291 [Dictyostelium purpureum] gi|325078179|gb|EGC31844.1| hypothetical protein DICPUDRAFT_39291 [Dictyostelium purpureum] Length = 307 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F I F ++ ++G+NG GKS++ A+ G I Sbjct: 109 IESITLENFMCHRHFH-ISFGSNVNFISGENGSGKSAVMIALIIALGAKASFTNRGSKIT 167 Query: 89 KR 90 Sbjct: 168 DL 169 >gi|315196809|gb|EFU27153.1| hypothetical protein CGSSa01_12167 [Staphylococcus aureus subsp. aureus CGS01] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|315225438|ref|ZP_07867252.1| recombination protein F [Capnocytophaga ochracea F0287] gi|314944711|gb|EFS96746.1| recombination protein F [Capnocytophaga ochracea F0287] Length = 374 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + L I + +++ Q F+ + G NG GK++L +AI Sbjct: 1 MMFLKQISVVNYKNILS-QAYVFSPTINCFVGDNGVGKTNLLDAI 44 >gi|311695975|gb|ADP98848.1| DNA repair protein RecN [marine bacterium HP15] Length = 559 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + +S++ E +++F+ +T + G+ G GKS + +A+ G Sbjct: 2 LTQLTVSNY-AIAERVELQFSKGMTALTGETGAGKSIVLDALGLAMGG 48 >gi|302333508|gb|ADL23701.1| large conserved outer membrane protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|298695111|gb|ADI98333.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED133] gi|323438862|gb|EGA96599.1| hypothetical protein SAO11_2317 [Staphylococcus aureus O11] gi|323441706|gb|EGA99351.1| hypothetical protein SAO46_2368 [Staphylococcus aureus O46] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|298385207|ref|ZP_06994766.1| conserved hypothetical protein [Bacteroides sp. 1_1_14] gi|298262351|gb|EFI05216.1| conserved hypothetical protein [Bacteroides sp. 1_1_14] Length = 575 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L DI + FR + + I+ + T++ G N GK++L W R I+ Sbjct: 3 LADITLKGFRNYKD-AHIKLEKN-TLIIGANDVGKTNLI----WAMRLLLDRSLSDYDIE 56 Query: 89 KRSIK 93 RS Sbjct: 57 PRSSD 61 >gi|282909160|ref|ZP_06316978.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282327424|gb|EFB57719.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WW2703/97] Length = 823 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|282917111|ref|ZP_06324869.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus D139] gi|283770927|ref|ZP_06343819.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus H19] gi|282319598|gb|EFB49950.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus D139] gi|283461074|gb|EFC08164.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus H19] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|282919604|ref|ZP_06327339.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus C427] gi|282317414|gb|EFB47788.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus C427] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|258423120|ref|ZP_05686014.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257846684|gb|EEV70704.1| conserved hypothetical protein [Staphylococcus aureus A9635] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|257428620|ref|ZP_05605018.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257275461|gb|EEV06948.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|257425955|ref|ZP_05602379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257271649|gb|EEV03795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|253735277|ref|ZP_04869442.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH130] gi|253726684|gb|EES95413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH130] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|253732499|ref|ZP_04866664.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253723780|gb|EES92509.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|253315174|ref|ZP_04838387.1| hypothetical protein SauraC_03188 [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|297588377|ref|ZP_06947020.1| probable DNA double-strand break repair ATPase [Finegoldia magna ATCC 53516] gi|297573750|gb|EFH92471.1| probable DNA double-strand break repair ATPase [Finegoldia magna ATCC 53516] Length = 750 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 K++ +++ F F IEF + ++ G N GK+++S+ IE +FYG+ Sbjct: 1 MKIIRLDLISFGRFNNYT-IEFGEKFNLIYGLNESGKTTISKFIEGVFYGF 50 >gi|209946178|gb|ACI97320.1| RAD50 [Drosophila melanogaster] Length = 633 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 I+F+ +T++ G+NG GK+++ E +++ G Sbjct: 1 IKFSSXVTLILGENGCGKTTVVECLKYALTG 31 >gi|163867417|ref|YP_001608614.1| recombination protein F [Bartonella tribocorum CIP 105476] gi|161017061|emb|CAK00619.1| DNA replication and repair protein [Bartonella tribocorum CIP 105476] Length = 377 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +++ +R ++ I F+ + G NG GK++L EA+ +L G RR Sbjct: 8 VSVRQLKLLRYRNYSFFN-IHFSGQHVVFTGHNGAGKTNLLEALSFLSPGRGLRRAAYSD 66 Query: 87 IKK 89 I Sbjct: 67 ISF 69 >gi|151221947|ref|YP_001332769.1| hypothetical protein NWMN_1735 [Staphylococcus aureus subsp. aureus str. Newman] gi|150374747|dbj|BAF68007.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|148268314|ref|YP_001247257.1| hypothetical protein SaurJH9_1896 [Staphylococcus aureus subsp. aureus JH9] gi|150394376|ref|YP_001317051.1| hypothetical protein SaurJH1_1930 [Staphylococcus aureus subsp. aureus JH1] gi|257793798|ref|ZP_05642777.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258420758|ref|ZP_05683697.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258447319|ref|ZP_05695466.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|258448198|ref|ZP_05696325.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258453369|ref|ZP_05701352.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|282928581|ref|ZP_06336180.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A10102] gi|295406149|ref|ZP_06815957.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A8819] gi|297244927|ref|ZP_06928804.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A8796] gi|147741383|gb|ABQ49681.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus JH9] gi|149946828|gb|ABR52764.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus JH1] gi|257787770|gb|EEV26110.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257843362|gb|EEV67772.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257853906|gb|EEV76862.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|257858437|gb|EEV81313.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257864461|gb|EEV87206.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|282589790|gb|EFB94875.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A10102] gi|285817523|gb|ADC38010.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus 04-02981] gi|294969146|gb|EFG45167.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A8819] gi|297178007|gb|EFH37255.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A8796] gi|315130513|gb|EFT86499.1| hypothetical protein CGSSa03_09720 [Staphylococcus aureus subsp. aureus CGS03] gi|329727342|gb|EGG63798.1| hypothetical protein SA21172_0706 [Staphylococcus aureus subsp. aureus 21172] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|57650632|ref|YP_186725.1| hypothetical protein SACOL1899 [Staphylococcus aureus subsp. aureus COL] gi|87160539|ref|YP_494475.1| hypothetical protein SAUSA300_1792 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195665|ref|YP_500471.1| hypothetical protein SAOUHSC_01974 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161510058|ref|YP_001575717.1| hypothetical protein USA300HOU_1835 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142174|ref|ZP_03566667.1| hypothetical protein SauraJ_11145 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452667|ref|ZP_05700666.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|262050136|ref|ZP_06022990.1| hypothetical protein SAD30_1100 [Staphylococcus aureus D30] gi|282924174|ref|ZP_06331849.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A9765] gi|284024889|ref|ZP_06379287.1| hypothetical protein Saura13_09875 [Staphylococcus aureus subsp. aureus 132] gi|294850271|ref|ZP_06791006.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A9754] gi|304380555|ref|ZP_07363230.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57284818|gb|AAW36912.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|87126513|gb|ABD21027.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203223|gb|ABD31033.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|160368867|gb|ABX29838.1| hypothetical protein USA300HOU_1835 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859642|gb|EEV82491.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|259161761|gb|EEW46349.1| hypothetical protein SAD30_1100 [Staphylococcus aureus D30] gi|269941314|emb|CBI49711.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282592969|gb|EFB97971.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A9765] gi|294822887|gb|EFG39321.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus A9754] gi|302751652|gb|ADL65829.1| large conserved outer membrane protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340884|gb|EFM06809.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320141307|gb|EFW33152.1| hypothetical protein HMPREF9528_00415 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143565|gb|EFW35345.1| hypothetical protein HMPREF9529_01000 [Staphylococcus aureus subsp. aureus MRSA177] gi|329314519|gb|AEB88932.1| DNA double-strand break repair ATPase [Staphylococcus aureus subsp. aureus T0131] gi|329729510|gb|EGG65912.1| hypothetical protein SA21189_0851 [Staphylococcus aureus subsp. aureus 21189] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|82751497|ref|YP_417238.1| hypothetical protein SAB1776c [Staphylococcus aureus RF122] gi|82657028|emb|CAI81465.1| conserved hypothetical protein [Staphylococcus aureus RF122] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|49484085|ref|YP_041309.1| hypothetical protein SAR1934 [Staphylococcus aureus subsp. aureus MRSA252] gi|257431257|ref|ZP_05607634.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433937|ref|ZP_05610295.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257436853|ref|ZP_05612897.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282904418|ref|ZP_06312306.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282906241|ref|ZP_06314096.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus Btn1260] gi|282911466|ref|ZP_06319268.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914638|ref|ZP_06322424.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282924984|ref|ZP_06332650.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus C101] gi|283958596|ref|ZP_06376047.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293503710|ref|ZP_06667557.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus 58-424] gi|293510731|ref|ZP_06669436.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus M809] gi|293537273|ref|ZP_06671953.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|295428421|ref|ZP_06821050.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590612|ref|ZP_06949250.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|49242214|emb|CAG40921.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257278205|gb|EEV08853.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257282030|gb|EEV12167.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284204|gb|EEV14327.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282313350|gb|EFB43746.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus C101] gi|282321819|gb|EFB52144.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282325161|gb|EFB55471.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282331533|gb|EFB61047.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596036|gb|EFC01000.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|283790745|gb|EFC29562.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920118|gb|EFD97186.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|291095376|gb|EFE25641.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus 58-424] gi|291466622|gb|EFF09143.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus M809] gi|295127821|gb|EFG57458.1| DNA double-strand break repair rad50 ATPase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575498|gb|EFH94214.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|312437692|gb|ADQ76763.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195754|gb|EFU26141.1| hypothetical protein CGSSa00_08855 [Staphylococcus aureus subsp. aureus CGS00] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|15924833|ref|NP_372367.1| hypothetical protein SAV1843 [Staphylococcus aureus subsp. aureus Mu50] gi|15927417|ref|NP_374950.1| hypothetical protein SA1661 [Staphylococcus aureus subsp. aureus N315] gi|21283513|ref|NP_646601.1| hypothetical protein MW1784 [Staphylococcus aureus subsp. aureus MW2] gi|49486660|ref|YP_043881.1| hypothetical protein SAS1764 [Staphylococcus aureus subsp. aureus MSSA476] gi|156980159|ref|YP_001442418.1| hypothetical protein SAHV_1828 [Staphylococcus aureus subsp. aureus Mu3] gi|255006631|ref|ZP_05145232.2| hypothetical protein SauraM_09180 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258413735|ref|ZP_05682008.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258438419|ref|ZP_05689703.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258443864|ref|ZP_05692203.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|269203480|ref|YP_003282749.1| hypothetical protein SAAV_1862 [Staphylococcus aureus subsp. aureus ED98] gi|282895141|ref|ZP_06303360.1| DNA double-strand break repair ATPase [Staphylococcus aureus A8117] gi|296276025|ref|ZP_06858532.1| hypothetical protein SauraMR_06737 [Staphylococcus aureus subsp. aureus MR1] gi|297207441|ref|ZP_06923878.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911526|ref|ZP_07128971.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|13701636|dbj|BAB42929.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247615|dbj|BAB58005.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204954|dbj|BAB95649.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49245103|emb|CAG43569.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|156722294|dbj|BAF78711.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257839522|gb|EEV63993.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257848463|gb|EEV72454.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257851270|gb|EEV75213.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|262075770|gb|ACY11743.1| hypothetical protein SAAV_1862 [Staphylococcus aureus subsp. aureus ED98] gi|282762485|gb|EFC02626.1| DNA double-strand break repair ATPase [Staphylococcus aureus A8117] gi|283471114|emb|CAQ50325.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ST398] gi|296887904|gb|EFH26800.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887158|gb|EFK82358.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|312830215|emb|CBX35057.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 978 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF + T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNKNFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|261212317|ref|ZP_05926602.1| ATP-dependent endonuclease [Vibrio sp. RC341] gi|260838248|gb|EEX64904.1| ATP-dependent endonuclease [Vibrio sp. RC341] Length = 543 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|256370827|ref|YP_003108651.1| DNA replication and repair protein RecF [Acidimicrobium ferrooxidans DSM 10331] gi|256007411|gb|ACU52978.1| DNA replication and repair protein RecF [Acidimicrobium ferrooxidans DSM 10331] Length = 346 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + I+ R ++ D + V G NG+GK+SL E++ + G + R ++ Sbjct: 1 MRSLRITGLRNL-DLTIDHVPDDIIAVVGSNGHGKTSLLESVSVVLAGRSFRTHDRSALV 59 Query: 89 KRSIK 93 + Sbjct: 60 RVGHD 64 >gi|255746678|ref|ZP_05420625.1| ATP-dependent endonuclease [Vibrio cholera CIRS 101] gi|262151204|ref|ZP_06028341.1| ATP-dependent endonuclease [Vibrio cholerae INDRE 91/1] gi|255736432|gb|EET91830.1| ATP-dependent endonuclease [Vibrio cholera CIRS 101] gi|262030971|gb|EEY49598.1| ATP-dependent endonuclease [Vibrio cholerae INDRE 91/1] Length = 543 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|229513286|ref|ZP_04402751.1| ATP-dependent endonuclease [Vibrio cholerae TMA 21] gi|229349696|gb|EEO14651.1| ATP-dependent endonuclease [Vibrio cholerae TMA 21] Length = 543 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|239815760|ref|YP_002944670.1| ABC transporter [Variovorax paradoxus S110] gi|239802337|gb|ACS19404.1| ABC transporter related [Variovorax paradoxus S110] Length = 247 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Query: 27 FKLLDIEISHFRGFTEIQKI--EFADH-LTIVNGQNGYGKSSLSEAI 70 +L ++ ++ +RG + + EFA LT + G NG GK+SL AI Sbjct: 6 IRLTNLTVA-YRGHPAVHHLSGEFAPGSLTAIVGPNGAGKTSLLAAI 51 >gi|254477354|ref|ZP_05090740.1| DNA replication and repair protein RecF [Ruegeria sp. R11] gi|214031597|gb|EEB72432.1| DNA replication and repair protein RecF [Ruegeria sp. R11] Length = 365 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + +SHFR + ++G NG GK+++ EA+ G RR Sbjct: 1 MLALTALTLSHFRSHL-RADLHLDGRPVAIHGANGAGKTNILEAVSLFSPGRGLRRASAA 59 Query: 86 SIKKRSIK 93 + +R + Sbjct: 60 DMARRPEE 67 >gi|153820237|ref|ZP_01972904.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126509220|gb|EAZ71814.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] Length = 204 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|90413730|ref|ZP_01221718.1| recombination protein F [Photobacterium profundum 3TCK] gi|90325199|gb|EAS41696.1| recombination protein F [Photobacterium profundum 3TCK] Length = 359 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + FR E + + + G NG GK+S+ EAI +L +G + R Sbjct: 1 MALTRLIVKDFRNI-EACDLALSPRFNFLVGANGSGKNSVLEAIHYLGHGRSFRSHLTSR 59 Query: 87 IKKRSIK 93 + + + Sbjct: 60 VIRHEQQ 66 >gi|78189920|ref|YP_380258.1| hypothetical protein Cag_1967 [Chlorobium chlorochromatii CaD3] gi|78172119|gb|ABB29215.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 844 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 28 KLLDI-EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 +L I + F+ F TI+ G NG GKSSL EA++ L RR Sbjct: 78 RLETIGPFNGFKRLGNSLVACFPKRATIIFGANGSGKSSLCEALKILASNDAPRR 132 >gi|49486190|ref|YP_043411.1| putative exonuclease [Staphylococcus aureus subsp. aureus MSSA476] gi|81827863|sp|Q6G9L2|SBCC_STAAS RecName: Full=Nuclease sbcCD subunit C gi|49244633|emb|CAG43064.1| putative exonuclease [Staphylococcus aureus subsp. aureus MSSA476] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|38505558|ref|NP_942179.1| hypothetical protein slr5023 [Synechocystis sp. PCC 6803] gi|38423582|dbj|BAD01793.1| slr5023 [Synechocystis sp. PCC 6803] Length = 393 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K++ I+I ++R F +I KI ++ G NG GKS+L + +L Sbjct: 1 MKIVSIKIKNYRVFEDI-KITNIPSFCVIIGANGTGKSTLFDVFGFL 46 >gi|147671695|ref|YP_001215318.1| hypothetical protein VC0395_0477 [Vibrio cholerae O395] gi|153212490|ref|ZP_01948259.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153800679|ref|ZP_01955265.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153827513|ref|ZP_01980180.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|229523040|ref|ZP_04412452.1| ATP-dependent endonuclease [Vibrio cholerae TM 11079-80] gi|229526847|ref|ZP_04416251.1| ATP-dependent endonuclease [Vibrio cholerae bv. albensis VL426] gi|229527609|ref|ZP_04417000.1| ATP-dependent endonuclease [Vibrio cholerae 12129(1)] gi|254285156|ref|ZP_04960122.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|262166956|ref|ZP_06034675.1| ATP-dependent endonuclease [Vibrio cholerae RC27] gi|262191044|ref|ZP_06049252.1| ATP-dependent endonuclease [Vibrio cholerae CT 5369-93] gi|297580336|ref|ZP_06942263.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124116527|gb|EAY35347.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124123814|gb|EAY42557.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|146314078|gb|ABQ18618.1| conserved hypothetical protein [Vibrio cholerae O395] gi|149738565|gb|EDM52920.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150425159|gb|EDN16936.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227015405|gb|ACP11614.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229333971|gb|EEN99456.1| ATP-dependent endonuclease [Vibrio cholerae 12129(1)] gi|229337005|gb|EEO02023.1| ATP-dependent endonuclease [Vibrio cholerae bv. albensis VL426] gi|229339890|gb|EEO04900.1| ATP-dependent endonuclease [Vibrio cholerae TM 11079-80] gi|262024597|gb|EEY43279.1| ATP-dependent endonuclease [Vibrio cholerae RC27] gi|262033065|gb|EEY51595.1| ATP-dependent endonuclease [Vibrio cholerae CT 5369-93] gi|297535982|gb|EFH74816.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|327485573|gb|AEA79979.1| Predicted ATP-dependent endonuclease of the OLD family [Vibrio cholerae LMA3894-4] Length = 543 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|15601303|ref|NP_232934.1| hypothetical protein VCA0544 [Vibrio cholerae O1 biovar eltor str. N16961] gi|153823761|ref|ZP_01976428.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227812113|ref|YP_002812123.1| hypothetical protein VCM66_A0503 [Vibrio cholerae M66-2] gi|229506285|ref|ZP_04395794.1| ATP-dependent endonuclease [Vibrio cholerae BX 330286] gi|229509595|ref|ZP_04399077.1| ATP-dependent endonuclease [Vibrio cholerae B33] gi|229516583|ref|ZP_04406030.1| ATP-dependent endonuclease [Vibrio cholerae RC9] gi|229605835|ref|YP_002876539.1| ATP-dependent endonuclease [Vibrio cholerae MJ-1236] gi|254849705|ref|ZP_05239055.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|298499343|ref|ZP_07009149.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657951|gb|AAF96446.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518719|gb|EAZ75942.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227011255|gb|ACP07466.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229346464|gb|EEO11435.1| ATP-dependent endonuclease [Vibrio cholerae RC9] gi|229353545|gb|EEO18483.1| ATP-dependent endonuclease [Vibrio cholerae B33] gi|229356636|gb|EEO21554.1| ATP-dependent endonuclease [Vibrio cholerae BX 330286] gi|229372321|gb|ACQ62743.1| ATP-dependent endonuclease [Vibrio cholerae MJ-1236] gi|254845410|gb|EET23824.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297541324|gb|EFH77375.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 554 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 12 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 57 >gi|315223794|ref|ZP_07865643.1| DNA repair protein RecN [Capnocytophaga ochracea F0287] gi|314946240|gb|EFS98240.1| DNA repair protein RecN [Capnocytophaga ochracea F0287] Length = 552 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + K++F I+ G+ G GKS + +A+ + + + Sbjct: 2 LNTLSIKNY-ALIDDLKVDFPKGFIIITGETGSGKSIMLDALSLVLGKRADMSALRNKDE 60 Query: 89 KRSIKTPMPM 98 K I+ + Sbjct: 61 KCVIEAEFSL 70 >gi|308510917|ref|XP_003117641.1| hypothetical protein CRE_00460 [Caenorhabditis remanei] gi|308238287|gb|EFO82239.1| hypothetical protein CRE_00460 [Caenorhabditis remanei] Length = 1031 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ +E+ +F + IEF ++ + G NG GKS+L AI G G Sbjct: 98 RIAKVELENFMCHKHLL-IEFNVRDNNCFYIGGANGSGKSALFAAIHLGLGGKASDNNRG 156 Query: 85 DSIKK 89 D++K+ Sbjct: 157 DNVKQ 161 >gi|293401680|ref|ZP_06645822.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304938|gb|EFE46185.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 449 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I+I +R F+ I F +HLT++ G NG GK+++ + Sbjct: 27 TRIKIEDWRQFS-NIDITFHEHLTVLTGANGAGKTTVLNLL 66 >gi|255532740|ref|YP_003093112.1| SMC domain-containing protein [Pedobacter heparinus DSM 2366] gi|255345724|gb|ACU05050.1| SMC domain protein [Pedobacter heparinus DSM 2366] Length = 423 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L I+I +F+ +++ IE + + G+NG GK+S+ EAI Sbjct: 2 LKSIKIKNFKSVQDLE-IELGR-VNVFIGENGCGKTSILEAI 41 >gi|227513560|ref|ZP_03943609.1| DNA repair ATPase [Lactobacillus buchneri ATCC 11577] gi|227083433|gb|EEI18745.1| DNA repair ATPase [Lactobacillus buchneri ATCC 11577] Length = 848 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHGDSIKKRSIK 93 +I F L ++ G N GKS++ + I + +G+ +R HG I K Sbjct: 17 TEISFNQSLEMIYGPNEAGKSTIIDFIISVLFGFQSKRQAIHGQYIPKNHQD 68 >gi|190341497|gb|ACE74825.1| RecN [Enterobacter aerogenes] Length = 543 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R D +++ + + Sbjct: 8 IDFHSGMTAITGETGAGKSIAIDALGLCLGG----RAEADMVRRGASR 51 >gi|255691924|ref|ZP_05415599.1| exonuclease SbcC [Bacteroides finegoldii DSM 17565] gi|260622330|gb|EEX45201.1| exonuclease SbcC [Bacteroides finegoldii DSM 17565] Length = 955 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFTAEPLCSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|145614600|ref|XP_001413872.1| hypothetical protein MGG_11387 [Magnaporthe oryzae 70-15] gi|145021504|gb|EDK05633.1| hypothetical protein MGG_11387 [Magnaporthe oryzae 70-15] Length = 1364 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 38 RGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 R F T Q + F LT++ G+NG GK+++ E +++ G G Sbjct: 69 RSFGPTNAQFVTFNTPLTLIVGENGSGKTTIIECLKYATTGEQPPNSKG 117 >gi|75908759|ref|YP_323055.1| ATPase-like protein [Anabaena variabilis ATCC 29413] gi|75702484|gb|ABA22160.1| ATPase-like protein [Anabaena variabilis ATCC 29413] Length = 419 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKHG 84 L + + +++ F + D LT++ G N GKS++ EA+E+L + G Sbjct: 2 LKQLILENWKSFRYAELP--LDPLTVLIGTNASGKSNVVEALEFLQRIARGENVEAALAG 59 Query: 85 DS 86 D Sbjct: 60 DK 61 >gi|329725396|gb|EGG61879.1| DNA repair protein RecN [Staphylococcus epidermidis VCU144] Length = 558 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELDINFSDGLTVMSGETGSGKSIIIDAI 42 >gi|329117151|ref|ZP_08245868.1| DNA repair protein RecN [Streptococcus parauberis NCFD 2020] gi|326907556|gb|EGE54470.1| DNA repair protein RecN [Streptococcus parauberis NCFD 2020] Length = 553 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F + +T++ G+ G GKS + +A+ + R + I+ Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNMMLG----ARASTEVIR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 HGQQKAEIE 65 >gi|319400856|gb|EFV89075.1| DNA repair protein RecN [Staphylococcus epidermidis FRI909] Length = 558 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELDINFSDGLTVMSGETGSGKSIIIDAI 42 >gi|242242788|ref|ZP_04797233.1| DNA repair protein RecN [Staphylococcus epidermidis W23144] gi|242233924|gb|EES36236.1| DNA repair protein RecN [Staphylococcus epidermidis W23144] Length = 558 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELDINFSDGLTVMSGETGSGKSIIIDAI 42 >gi|302751178|gb|ADL65355.1| exonuclease subunit SbcC [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|190360283|sp|Q2FYT3|SBCC_STAA8 RecName: Full=Nuclease sbcCD subunit C Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|218439002|ref|YP_002377331.1| ATPase [Cyanothece sp. PCC 7424] gi|218171730|gb|ACK70463.1| ATPase [Cyanothece sp. PCC 7424] Length = 399 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL-------F 74 ++ I ++ + + ++R +++ LT++ G NG GKS++ + +L Sbjct: 2 SKTSIPRIEYLRVQNYRALRDLELKNITP-LTVLLGPNGSGKSTIFDVFAFLSECFTLGL 60 Query: 75 YGYTQRRKHGDSIKKRSIK 93 +R ++ R Sbjct: 61 RKAWDKRGRFKELRTRGQD 79 >gi|87160359|ref|YP_493940.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|123486034|sp|Q2FH88|SBCC_STAA3 RecName: Full=Nuclease sbcCD subunit C gi|87126333|gb|ABD20847.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_FPR3757] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|27468118|ref|NP_764755.1| DNA repair protein [Staphylococcus epidermidis ATCC 12228] gi|57867000|ref|YP_188657.1| DNA repair protein RecN [Staphylococcus epidermidis RP62A] gi|251810932|ref|ZP_04825405.1| DNA repair protein RecN [Staphylococcus epidermidis BCM-HMP0060] gi|282876059|ref|ZP_06284926.1| DNA repair protein RecN [Staphylococcus epidermidis SK135] gi|293366524|ref|ZP_06613201.1| DNA repair protein RecN [Staphylococcus epidermidis M23864:W2(grey)] gi|27315664|gb|AAO04799.1|AE016748_33 DNA repair protein [Staphylococcus epidermidis ATCC 12228] gi|57637658|gb|AAW54446.1| DNA repair protein RecN [Staphylococcus epidermidis RP62A] gi|251805612|gb|EES58269.1| DNA repair protein RecN [Staphylococcus epidermidis BCM-HMP0060] gi|281295084|gb|EFA87611.1| DNA repair protein RecN [Staphylococcus epidermidis SK135] gi|291319293|gb|EFE59662.1| DNA repair protein RecN [Staphylococcus epidermidis M23864:W2(grey)] gi|329735262|gb|EGG71554.1| DNA repair protein RecN [Staphylococcus epidermidis VCU045] gi|329737397|gb|EGG73651.1| DNA repair protein RecN [Staphylococcus epidermidis VCU028] Length = 558 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELDINFSDGLTVMSGETGSGKSIIIDAI 42 >gi|325696379|gb|EGD38270.1| hypothetical protein HMPREF9384_2267 [Streptococcus sanguinis SK160] Length = 616 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + I ++ +I+F +T++ GQNG K+S+ +A YG T + GD Sbjct: 27 IEHIRFPKYKSLVPNSRIDFTYPITLLVGQNGGNKTSILQA----LYGSTDGKSIGDY 80 >gi|320140827|gb|EFW32674.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus MRSA131] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|284518892|gb|ADB92580.1| Sca3 [Streptomyces caelestis] Length = 547 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 7/73 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+++ +GF + I+ F + + + G NG GK++L + I+ + + K G Sbjct: 315 VEVNNLTKGFGDKLLIDDLSFTLPRNGIVGIIGPNGAGKTTLFKMIQGIEEPDSGAIKVG 374 Query: 85 DSIKKRSIKTPMP 97 D++K + Sbjct: 375 DTVKISYVDQSRE 387 >gi|312882233|ref|ZP_07741979.1| recombination protein F [Vibrio caribbenthicus ATCC BAA-2122] gi|309370077|gb|EFP97583.1| recombination protein F [Vibrio caribbenthicus ATCC BAA-2122] Length = 360 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + I FR IE + + G NG GK+S+ EAI L +G + + Sbjct: 1 MPLSRLIIQQFRNIKACD-IELSAGFNFLIGVNGSGKTSVLEAIYLLGHGRSFKS 54 >gi|255324488|ref|ZP_05365605.1| ATPase involved in DNA repair [Corynebacterium tuberculostearicum SK141] gi|255298394|gb|EET77694.1| ATPase involved in DNA repair [Corynebacterium tuberculostearicum SK141] Length = 861 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHG 84 ++ +E+++ RG + E + + +++G+N GKS++ EA++ + ++ R K Sbjct: 1 MRIHRLELTNVRGIEHLVLDELPETGVVVIHGENEAGKSTIVEALDVVLTEKHSGRSKRI 60 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQLK 110 S++ + + +Y+ + Sbjct: 61 RSLQPVGKDVAPEVTAELSVGEYRFR 86 >gi|190405425|gb|EDV08692.1| hypothetical protein SCRG_04323 [Saccharomyces cerevisiae RM11-1a] Length = 1114 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 81 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139 Query: 88 KKR 90 K Sbjct: 140 KDL 142 >gi|189200513|ref|XP_001936593.1| structural maintenance of chromosomes protein 6 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983692|gb|EDU49180.1| structural maintenance of chromosomes protein 6 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1139 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F E + + + G NG GKS++ A+ G ++K Sbjct: 93 IEEIQCINFMCH-EHLTVTLGPLINFIIGHNGSGKSAVLTALTICLGGKATATNRAQNLK 151 >gi|229916246|ref|YP_002884892.1| DNA repair protein RecN [Exiguobacterium sp. AT1b] gi|229467675|gb|ACQ69447.1| DNA repair protein RecN [Exiguobacterium sp. AT1b] Length = 565 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F + I F +T++ G+ G GKS L +AI L G R + ++ Sbjct: 2 LAELSIKQF-AIIDELNIPFNRGMTVLTGETGAGKSILLDAIGLLVGG----RGSSEFVR 56 Query: 89 KRSIKTPMP 97 K + Sbjct: 57 YGQDKAEIE 65 >gi|172040950|ref|YP_001800664.1| hypothetical protein cur_1270 [Corynebacterium urealyticum DSM 7109] gi|171852254|emb|CAQ05230.1| hypothetical protein cu1270 [Corynebacterium urealyticum DSM 7109] Length = 1116 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+L I++ ++ F + +E ++ G +G GKS+L +AI + Sbjct: 9 FRLSQIQVYNWGTFDNLHCVEVPREGFLITGPSGSGKSTLIDAISTIL 56 >gi|156084254|ref|XP_001609610.1| hypothetical protein [Babesia bovis T2Bo] gi|154796862|gb|EDO06042.1| hypothetical protein BBOV_II000820 [Babesia bovis] Length = 1307 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + ++ +T +++ + I+ NG GKS++ AI T GD+I+ Sbjct: 14 IDSITVENWMAYTGPVRLKALPGVNIIAAANGCGKSAIVCAIALGLGFDTNVLSRGDNIR 73 >gi|151940904|gb|EDN59286.1| structural maintenance of chromosomes [Saccharomyces cerevisiae YJM789] Length = 1114 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 81 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139 Query: 88 KKR 90 K Sbjct: 140 KDL 142 >gi|57650351|ref|YP_186235.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus COL] gi|151221470|ref|YP_001332292.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus str. Newman] gi|161509514|ref|YP_001575173.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451745|ref|ZP_05699769.1| nuclease sbcCD subunit C [Staphylococcus aureus A5948] gi|262051393|ref|ZP_06023616.1| hypothetical protein SA930_2115 [Staphylococcus aureus 930918-3] gi|282920614|ref|ZP_06328335.1| nuclease sbcCD subunit C [Staphylococcus aureus A9765] gi|284024348|ref|ZP_06378746.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus 132] gi|294848351|ref|ZP_06789098.1| nuclease sbcCD subunit C [Staphylococcus aureus A9754] gi|81859594|sp|Q5HG72|SBCC_STAAC RecName: Full=Nuclease sbcCD subunit C gi|190410902|sp|A6QGP8|SBCC_STAAE RecName: Full=Nuclease sbcCD subunit C gi|190410903|sp|A8Z219|SBCC_STAAT RecName: Full=Nuclease sbcCD subunit C gi|57284537|gb|AAW36631.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus COL] gi|150374270|dbj|BAF67530.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus str. Newman] gi|160368323|gb|ABX29294.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860576|gb|EEV83400.1| nuclease sbcCD subunit C [Staphylococcus aureus A5948] gi|259160768|gb|EEW45789.1| hypothetical protein SA930_2115 [Staphylococcus aureus 930918-3] gi|269940845|emb|CBI49227.1| putative exonuclease [Staphylococcus aureus subsp. aureus TW20] gi|282594276|gb|EFB99263.1| nuclease sbcCD subunit C [Staphylococcus aureus A9765] gi|294825151|gb|EFG41573.1| nuclease sbcCD subunit C [Staphylococcus aureus A9754] gi|315198602|gb|EFU28931.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus CGS01] gi|320143905|gb|EFW35677.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus MRSA177] gi|329314025|gb|AEB88438.1| Nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus T0131] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|6323415|ref|NP_013487.1| Smc6p [Saccharomyces cerevisiae S288c] gi|2500793|sp|Q12749|SMC6_YEAST RecName: Full=Structural maintenance of chromosomes protein 6; AltName: Full=DNA repair protein RHC18; AltName: Full=Rad18 homolog gi|609425|gb|AAB67273.1| Ylr383wp [Saccharomyces cerevisiae] gi|1150625|emb|CAA56902.1| RHC18 [Saccharomyces cerevisiae] gi|285813788|tpg|DAA09684.1| TPA: Smc6p [Saccharomyces cerevisiae S288c] Length = 1114 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 81 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139 Query: 88 KKR 90 K Sbjct: 140 KDL 142 >gi|21282962|ref|NP_646050.1| hypothetical protein MW1233 [Staphylococcus aureus subsp. aureus MW2] gi|297208000|ref|ZP_06924431.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912084|ref|ZP_07129527.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus TCH70] gi|81847821|sp|Q8NWV1|SBCC_STAAW RecName: Full=Nuclease sbcCD subunit C gi|21204401|dbj|BAB95098.1| MW1233 [Staphylococcus aureus subsp. aureus MW2] gi|296887243|gb|EFH26145.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886330|gb|EFK81532.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus TCH70] Length = 1009 Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|256269118|gb|EEU04453.1| Smc6p [Saccharomyces cerevisiae JAY291] Length = 1114 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 81 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139 Query: 88 KKR 90 K Sbjct: 140 KDL 142 >gi|227499719|ref|ZP_03929819.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227218186|gb|EEI83449.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 617 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F F + KI F + G+N GKS+++ IE L YG+ + + Sbjct: 4 IFIKELYLLSFGKFEDK-KIIFDRDFNLFYGKNESGKSTITAFIEGLLYGFDEGKNRKSF 62 Query: 87 IKKRSIKTPM 96 KK+ I P Sbjct: 63 SKKKEIYKPK 72 >gi|159030942|emb|CAO88632.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 268 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L ++I FRGF + + ++ G+N GK+S+ EAI Sbjct: 2 LQSLKIEGFRGFHNFEMANLGR-INLLVGKNNSGKTSILEAI 42 >gi|62320304|dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis thaliana] Length = 554 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 31 DIEISHFRGFTEIQK--IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + I R F K + F LT++ G NG GK+++ E ++ G Sbjct: 6 KMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTG 53 >gi|191168711|ref|ZP_03030490.1| DNA sulfur modification protein DndD [Escherichia coli B7A] gi|190901259|gb|EDV61029.1| DNA sulfur modification protein DndD [Escherichia coli B7A] Length = 666 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFNGTHTIDLAPRKRPHDLNPRPIVLFGGLNGAGKTSILSAIRIALYG 60 >gi|322834142|ref|YP_004214169.1| DNA repair protein RecN [Rahnella sp. Y9602] gi|321169343|gb|ADW75042.1| DNA repair protein RecN [Rahnella sp. Y9602] Length = 553 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS+F E++ I+F +T + G+ G GKS +A+ Sbjct: 2 LAQLTISNFAIVRELE-IDFHAGMTAITGETGAGKSIAIDALGLCLG 47 >gi|253731979|ref|ZP_04866144.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733407|ref|ZP_04867572.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus TCH130] gi|253724389|gb|EES93118.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728461|gb|EES97190.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus TCH130] Length = 1009 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|241762978|ref|ZP_04761040.1| putative exonuclease [Acidovorax delafieldii 2AN] gi|241367930|gb|EER62149.1| putative exonuclease [Acidovorax delafieldii 2AN] Length = 599 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 KL I I++FR F E+ D ++ G+N GKS+L A+ +F Sbjct: 1 MKLTRIYINNFRNFLELDVA--LDGSAVIVGENRVGKSNLLYALRLIFD 47 >gi|163731463|ref|ZP_02138910.1| molybdate ABC transporter, ATP-binding protein [Roseobacter litoralis Och 149] gi|161394917|gb|EDQ19239.1| molybdate ABC transporter, ATP-binding protein [Roseobacter litoralis Och 149] Length = 365 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F GFT E + +T++ G++G GK+++ A+ L Sbjct: 11 FAGFTLDASFEAPNGITVLYGRSGSGKTTIVNALAGLL 48 >gi|126740415|ref|ZP_01756103.1| ABC transporter, ATP-binding protein [Roseobacter sp. SK209-2-6] gi|126718551|gb|EBA15265.1| ABC transporter, ATP-binding protein [Roseobacter sp. SK209-2-6] Length = 261 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + F +T++ G+NG GKS+L EAI GY + Sbjct: 45 LRFTTPVTVIVGENGTGKSTLIEAIA-ALSGYDEAGGGKGY 84 >gi|15644017|ref|NP_229066.1| phosphate ABC transporter ATP-binding protein [Thermotoga maritima MSB8] gi|148270634|ref|YP_001245094.1| phosphate ABC transporter ATP-binding protein [Thermotoga petrophila RKU-1] gi|281412944|ref|YP_003347023.1| phosphate ABC transporter, ATPase subunit [Thermotoga naphthophila RKU-10] gi|34582493|sp|Q9X0Y8|PSTB_THEMA RecName: Full=Phosphate import ATP-binding protein PstB; AltName: Full=ABC phosphate transporter; AltName: Full=Phosphate-transporting ATPase gi|4981816|gb|AAD36335.1|AE001781_6 phosphate ABC transporter, ATP-binding protein [Thermotoga maritima MSB8] gi|147736178|gb|ABQ47518.1| phosphate ABC transporter, ATPase subunit [Thermotoga petrophila RKU-1] gi|281374047|gb|ADA67609.1| phosphate ABC transporter, ATPase subunit [Thermotoga naphthophila RKU-10] Length = 251 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 9/47 (19%) Query: 32 IEISHFRGFTEIQ--------KIEFADHLTIVNGQNGYGKSSLSEAI 70 IEI +F + + KI F + +T + G +G GK++L +I Sbjct: 5 IEIENFSAYYGEKIAVKNVTMKI-FKNQITAIIGPSGCGKTTLLRSI 50 >gi|242240370|ref|YP_002988551.1| exonuclease [Dickeya dadantii Ech703] gi|242132427|gb|ACS86729.1| putative exonuclease [Dickeya dadantii Ech703] Length = 659 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ +EI F+ F + + + T + G NG GK+++ A+ +F + R Sbjct: 1 MKITQMEIKGFKSFDNVGQTININSFTSLIGGNGTGKTAVLLALTRMFGVKSSDRI 56 >gi|183983067|ref|YP_001851358.1| hypothetical protein MMAR_3068 [Mycobacterium marinum M] gi|183176393|gb|ACC41503.1| conserved protein [Mycobacterium marinum M] Length = 1120 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F+ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHSIPFSVGGALIAGASGSGKSSLLDAI 48 >gi|168212804|ref|ZP_02638429.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|170715536|gb|EDT27718.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 922 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R ++ Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVDNKRGKK-TLS 60 Query: 89 KRSIKTPM 96 RS TP+ Sbjct: 61 DRSKFTPL 68 >gi|167623233|ref|YP_001673527.1| ATP-dependent OLD family endonuclease [Shewanella halifaxensis HAW-EB4] gi|167353255|gb|ABZ75868.1| ATP-dependent endonuclease of the OLD family-like protein [Shewanella halifaxensis HAW-EB4] Length = 415 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 +EI+H++ F E + D LTI+ G NG GK+++ Sbjct: 1 MHFKKLEINHWQQF-ETVDLAIHDRLTIITGSNGCGKTTILN 41 >gi|154418105|ref|XP_001582071.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] gi|121916304|gb|EAY21085.1| RecF/RecN/SMC N terminal domain containing protein [Trichomonas vaginalis G3] Length = 1053 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L I++ +F F + + ++ G NG GKSS+ AI F Sbjct: 30 ILKIKLKNFMAF-DKITVCPGPGTNLILGTNGSGKSSIIAAIGICFGASPA 79 >gi|118617825|ref|YP_906157.1| hypothetical protein MUL_2313 [Mycobacterium ulcerans Agy99] gi|118569935|gb|ABL04686.1| conserved protein [Mycobacterium ulcerans Agy99] Length = 1113 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F L +++ ++ F I F+ ++ G +G GKSSL +AI Sbjct: 5 FHLSRLQVINWGVFDGYHSIPFSVGGALIAGASGSGKSSLLDAI 48 >gi|329571823|gb|EGG53501.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1467] Length = 238 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLELKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|327535333|gb|AEA94167.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis OG1RF] Length = 238 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLELKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|317488598|ref|ZP_07947143.1| hypothetical protein HMPREF1023_00841 [Eggerthella sp. 1_3_56FAA] gi|325832013|ref|ZP_08165110.1| conserved domain protein [Eggerthella sp. HGA1] gi|316912340|gb|EFV33904.1| hypothetical protein HMPREF1023_00841 [Eggerthella sp. 1_3_56FAA] gi|325486334|gb|EGC88786.1| conserved domain protein [Eggerthella sp. HGA1] Length = 846 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 2 TRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGY 61 +R+R + C+ L +S T+ + + F ++ R +E + F+ + G G Sbjct: 277 SRIRTSDACSILPQSNTTKFLESVSF---NVWTDGGRQNSETITLPFSPGYNGIVGSRGS 333 Query: 62 GKSSLS 67 GK+ L+ Sbjct: 334 GKTLLA 339 >gi|256959174|ref|ZP_05563345.1| SMC domain-containing protein [Enterococcus faecalis DS5] gi|257084984|ref|ZP_05579345.1| SMC domain-containing protein [Enterococcus faecalis Fly1] gi|300860217|ref|ZP_07106304.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TUSoD Ef11] gi|256949670|gb|EEU66302.1| SMC domain-containing protein [Enterococcus faecalis DS5] gi|256993014|gb|EEU80316.1| SMC domain-containing protein [Enterococcus faecalis Fly1] gi|300849256|gb|EFK77006.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TUSoD Ef11] gi|315037180|gb|EFT49112.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0027] gi|315174826|gb|EFU18843.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1346] Length = 238 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLELKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|229549811|ref|ZP_04438536.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis ATCC 29200] gi|255972539|ref|ZP_05423125.1| SMC domain-containing protein [Enterococcus faecalis T1] gi|256762753|ref|ZP_05503333.1| SMC domain-containing protein [Enterococcus faecalis T3] gi|257079211|ref|ZP_05573572.1| SMC domain-containing protein [Enterococcus faecalis JH1] gi|294779425|ref|ZP_06744826.1| ABC transporter, ATP-binding protein [Enterococcus faecalis PC1.1] gi|307269582|ref|ZP_07550921.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX4248] gi|312951700|ref|ZP_07770595.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0102] gi|229305080|gb|EEN71076.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis ATCC 29200] gi|255963557|gb|EET96033.1| SMC domain-containing protein [Enterococcus faecalis T1] gi|256684004|gb|EEU23699.1| SMC domain-containing protein [Enterococcus faecalis T3] gi|256987241|gb|EEU74543.1| SMC domain-containing protein [Enterococcus faecalis JH1] gi|294453554|gb|EFG21955.1| ABC transporter, ATP-binding protein [Enterococcus faecalis PC1.1] gi|306514202|gb|EFM82778.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX4248] gi|310630417|gb|EFQ13700.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0102] gi|315147466|gb|EFT91482.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX4244] gi|315152279|gb|EFT96295.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0031] gi|315158279|gb|EFU02296.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0312] Length = 238 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E+ F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLELKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|27468393|ref|NP_765030.1| abortive phage resistance protein [Staphylococcus epidermidis ATCC 12228] gi|27315940|gb|AAO05074.1|AE016749_20 abortive phage resistance protein [Staphylococcus epidermidis ATCC 12228] Length = 443 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWL 73 +I + +E+ +++ F + +I+F + + + G+NG GKS++ +L Sbjct: 1 MIKLIKSVELKNYKSF-KKVEIDFTSNIQSENKFSFIYGENGSGKSNIISVFHFL 54 >gi|56963170|ref|YP_174898.1| hypothetical protein ABC1399 [Bacillus clausii KSM-K16] gi|56909410|dbj|BAD63937.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 670 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS-- 86 + + + +FR F + + L+ G+N GK++L + LF + R S Sbjct: 3 ISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKSDF 62 Query: 87 --IKKRSIKTPMPMCMAV 102 K+ ++T + +++ Sbjct: 63 HIPKQAKVETIKELQLSI 80 >gi|323702790|ref|ZP_08114450.1| DNA repair protein RecN [Desulfotomaculum nigrificans DSM 574] gi|323532307|gb|EGB22186.1| DNA repair protein RecN [Desulfotomaculum nigrificans DSM 574] Length = 564 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I +F + ++ F L IV G+ G GKS L +A++ Sbjct: 2 LHSLYIKNF-ALIDDVEVNFGGGLNIVTGETGAGKSMLIDALQVALG 47 >gi|315427317|dbj|BAJ48928.1| ABC transporter ATP-binding protein [Candidatus Caldiarchaeum subterraneum] gi|315428179|dbj|BAJ49763.1| ABC transporter ATP-binding protein [Candidatus Caldiarchaeum subterraneum] Length = 251 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 13/60 (21%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A L LT Y + I L D+ FRG +T V G NG GKS+L +A+ Sbjct: 4 AVLVDGLTVAYEK--IVALEDVSFKIFRG-----------SITAVVGPNGSGKSTLFKAL 50 >gi|307823122|ref|ZP_07653352.1| SMC domain protein [Methylobacter tundripaludum SV96] gi|307735897|gb|EFO06744.1| SMC domain protein [Methylobacter tundripaludum SV96] Length = 385 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + I + +F+ + +F + G NG GKS++ +AI+++ D + Sbjct: 2 IKSIAVRNFKSLAD---FDFKLSKFNCLIGMNGAGKSTVLQAIDFIA--QLMVGNVDDWL 56 Query: 88 KKRSIKTPMPMCMAVPRCKYQLK 110 +R T + + CK Q K Sbjct: 57 IRREW-TALELN-----CKLQSK 73 >gi|302551494|ref|ZP_07303836.1| ABC transporter ATP-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302469112|gb|EFL32205.1| ABC transporter ATP-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 554 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +EI++ + F E I+ F + + + G NG GK++L + I+ L + K G Sbjct: 322 VEINNLSKAFGEKVLIDDLSFTLPRNGIVGIIGPNGAGKTTLFKMIQGLEEPDSGSIKVG 381 Query: 85 DSIKKRSIKTPMP 97 D++K + Sbjct: 382 DTVKISYVDQSRE 394 >gi|295104261|emb|CBL01805.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3] Length = 401 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 21/75 (28%) Query: 29 LLDIEISHFRGFTEIQKIEFA--------------------DHLTIVNGQNGYGKSSLSE 68 L +F+ + + +F ++ V G NG GK++L + Sbjct: 2 LCQFSFQNFKSYKDETTFDFRAMAIPEFQDALIRQEKAEDLLPVSAVYGPNGGGKTNLLQ 61 Query: 69 AIEWLFYGYTQRRKH 83 A + + H Sbjct: 62 A-FFCLINLVVKPIH 75 >gi|295101100|emb|CBK98645.1| hypothetical protein FP2_10990 [Faecalibacterium prausnitzii L2-6] Length = 401 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 21/75 (28%) Query: 29 LLDIEISHFRGFTEIQKIEFA--------------------DHLTIVNGQNGYGKSSLSE 68 L +F+ + + +F ++ V G NG GK++L + Sbjct: 2 LCQFSFQNFKSYKDETTFDFRAMAIPEFQDALIRQEKAEDLLPVSAVYGPNGGGKTNLLQ 61 Query: 69 AIEWLFYGYTQRRKH 83 A + + H Sbjct: 62 A-FFCLINLVVKPIH 75 >gi|260887332|ref|ZP_05898595.1| DNA repair protein RecN [Selenomonas sputigena ATCC 35185] gi|330838915|ref|YP_004413495.1| DNA repair protein RecN [Selenomonas sputigena ATCC 35185] gi|260862968|gb|EEX77468.1| DNA repair protein RecN [Selenomonas sputigena ATCC 35185] gi|329746679|gb|AEC00036.1| DNA repair protein RecN [Selenomonas sputigena ATCC 35185] Length = 571 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F E KIEF L I+ G+ G GKS L +A+ + +R +I+ Sbjct: 2 LKTLTVWNF-ALLEHVKIEFGAGLNILTGETGAGKSILIDALGAVLG----KRLAATAIR 56 >gi|257094930|ref|YP_003168571.1| SMC domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047454|gb|ACV36642.1| SMC domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 489 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L I +++FR F E ++ L++ G+NG GK+++ + I Sbjct: 14 MRLKKITLNNFRCF-ESFEVTLHPRLSVFVGENGAGKTAVLDGIATALT 61 >gi|228987365|ref|ZP_04147485.1| DNA repair protein recN [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772337|gb|EEM20783.1| DNA repair protein recN [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 600 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 13 LSKSLTSYYARKLIFK------LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL 66 ++K L R L++ L ++ I +F E I F LT+++G+ G GKS + Sbjct: 1 MNKELRKALHRGLVYNEVNGALLSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSII 59 Query: 67 SEAIEWLFYGYTQRRKHGDSIKKRSIKTPMP 97 +AI L G R + ++ + K + Sbjct: 60 IDAISLLVGG----RGSAEFVRYGTEKAEIE 86 >gi|160944843|ref|ZP_02092070.1| hypothetical protein FAEPRAM212_02359 [Faecalibacterium prausnitzii M21/2] gi|158444027|gb|EDP21031.1| hypothetical protein FAEPRAM212_02359 [Faecalibacterium prausnitzii M21/2] Length = 401 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 21/75 (28%) Query: 29 LLDIEISHFRGFTEIQKIEFA--------------------DHLTIVNGQNGYGKSSLSE 68 L +F+ + + +F ++ V G NG GK++L + Sbjct: 2 LCQFSFQNFKSYKDETTFDFRAMAIPEFQDALIRQEKAEDLLPVSAVYGPNGGGKTNLLQ 61 Query: 69 AIEWLFYGYTQRRKH 83 A + + H Sbjct: 62 A-FFCLINLVVKPIH 75 >gi|159900189|ref|YP_001546436.1| hypothetical protein Haur_3672 [Herpetosiphon aurantiacus ATCC 23779] gi|159893228|gb|ABX06308.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC 23779] Length = 378 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +L + I +FRGF E +I + ++ G+N GK+SL EAI WL Sbjct: 4 LQLNSLIIQNFRGF-ENFQINQLGRVNLIVGKNNIGKTSLLEAI-WL 48 >gi|307322482|ref|ZP_07601833.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306891873|gb|EFN22708.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 675 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L I + +FR +++ + T++ G+N GK+SL+E ++ L + T Sbjct: 1 MQLHKISVKNFRLLHDVEVL-LEPRTTVIVGRNNCGKTSLTEVVKRLLHDKTA 52 >gi|293605730|ref|ZP_06688106.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815855|gb|EFF74960.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 625 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL I + FR F + ++ D L + G N GKS+++ AI F K D Sbjct: 1 MKLSRIALEEFRKFRQPLVLDGLQDGLNLFVGANEAGKSTVAAAIRAAFLERYSTSKVAD 60 Query: 86 SIK--KRSIKTPMPMCMAVPRCKYQLK 110 + + + + A +Y LK Sbjct: 61 LAPHGESGARPSVELSFAHAGHRYVLK 87 >gi|207342761|gb|EDZ70423.1| YLR383Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1067 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G S+ Sbjct: 34 YIKKVILRNFMCH-EHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 92 Query: 88 KKR 90 K Sbjct: 93 KDL 95 >gi|254372940|ref|ZP_04988429.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570667|gb|EDN36321.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 694 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 K+ ++I ++ I+ + G NG GKS++ EA+ ++F Sbjct: 1 MKITRLKIKGYKNLY--IDIKHESDIMAFIGLNGSGKSNVLEALSFIFRE 48 >gi|119485389|ref|ZP_01619717.1| DNA repair protein RecN [Lyngbya sp. PCC 8106] gi|119457145|gb|EAW38271.1| DNA repair protein RecN [Lyngbya sp. PCC 8106] Length = 576 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + I +F + +E L + G+ G GKS + +AI+ + G RR K Sbjct: 2 LLSLRIDNF-ALVDHLDLELGLGLNVFTGETGAGKSIILDAIDAVLGGKVDRRVIRTGAK 60 Query: 89 K 89 + Sbjct: 61 R 61 >gi|289772498|ref|ZP_06531876.1| iron-siderophore uptake system ATP-binding component [Streptomyces lividans TK24] gi|289702697|gb|EFD70126.1| iron-siderophore uptake system ATP-binding component [Streptomyces lividans TK24] Length = 282 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 R E +E D+ T++ G N GKS+L A+ + R S+ + Sbjct: 16 RVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVLLDGSVIQS 69 >gi|256788605|ref|ZP_05527036.1| iron-siderophore uptake system ATP-binding component [Streptomyces lividans TK24] Length = 301 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 R E +E D+ T++ G N GKS+L A+ + R S+ + Sbjct: 35 RVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVLLDGSVIQS 88 >gi|241664908|ref|YP_002983268.1| SMC domain-containing protein [Ralstonia pickettii 12D] gi|240866935|gb|ACS64596.1| SMC domain protein [Ralstonia pickettii 12D] Length = 249 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 +E +T + G+NG GKS+L EAI + + + + + + + R Sbjct: 35 TLELHPKVTFLVGENGSGKSTLMEAIAVALGFNAEGGSRNFNFSTHASHSELHAHLRIAR 94 >gi|21244664|ref|NP_644246.1| recombination-like protein [Xanthomonas axonopodis pv. citri str. 306] gi|21110350|gb|AAM38782.1| recombination related protein [Xanthomonas axonopodis pv. citri str. 306] Length = 61 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + ++ I++FR + F L ++ G N GK+++ +A+ L G+ + Sbjct: 1 MAELTITNFRKIN-NAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDE 50 >gi|21220277|ref|NP_626056.1| iron-siderophore uptake system ATP-binding protein [Streptomyces coelicolor A3(2)] gi|5738501|emb|CAB52849.1| putative iron-siderophore uptake system ATP-binding component [Streptomyces coelicolor A3(2)] Length = 301 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 R E +E D+ T++ G N GKS+L A+ + R S+ + Sbjct: 35 RVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVLLDGSVIQS 88 >gi|326941955|gb|AEA17851.1| dihydrolipoamide dehydrogenase [Bacillus thuringiensis serovar chinensis CT-43] Length = 176 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|324328088|gb|ADY23348.1| DNA repair protein RecN [Bacillus thuringiensis serovar finitimus YBT-020] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|323464091|gb|ADX76244.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] Length = 974 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +EI + F + K+EF + T + GQN GKS+L I + +G+ ++++ Sbjct: 1 MKIKSVEIYGYGQFVQR-KVEFDQYFTEIFGQNEAGKSTLQAFIHSILFGFPTKKEN 56 >gi|319892876|ref|YP_004149751.1| DNA double-strand break repair rad50 ATPase [Staphylococcus pseudintermedius HKU10-03] gi|317162572|gb|ADV06115.1| DNA double-strand break repair rad50 ATPase [Staphylococcus pseudintermedius HKU10-03] Length = 974 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +EI + F + K+EF + T + GQN GKS+L I + +G+ ++++ Sbjct: 1 MKIKSVEIYGYGQFVQR-KVEFDQYFTEIFGQNEAGKSTLQAFIHSILFGFPTKKEN 56 >gi|330905964|ref|XP_003295299.1| hypothetical protein PTT_00367 [Pyrenophora teres f. teres 0-1] gi|311333517|gb|EFQ96610.1| hypothetical protein PTT_00367 [Pyrenophora teres f. teres 0-1] Length = 1137 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I+ +F E + + + G NG GKS++ A+ G ++K Sbjct: 92 IEEIQCINFMCH-EHLTVTLGPLINFIIGHNGSGKSAVLTALTICLGGKATATNRAQNLK 150 >gi|307131657|ref|YP_003883673.1| hypothetical protein Dda3937_03955 [Dickeya dadantii 3937] gi|306529186|gb|ADM99116.1| hypothetical protein Dda3937_03955 [Dickeya dadantii 3937] Length = 1140 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 26/57 (45%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +L ++ + + F + + T++ G NG GKS+L + + L ++ + Sbjct: 30 IRLAELSVYTWGSFHGLHSAKIDPGGTLITGDNGAGKSTLIDGLMALLLPSSKASFN 86 >gi|283785220|ref|YP_003365085.1| ABC transporter ATP-binding protein [Citrobacter rodentium ICC168] gi|282948674|emb|CBG88266.1| putative ABC transport ATP-binding subunit [Citrobacter rodentium ICC168] Length = 265 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L +I +S F GF + + L + G NG GK++L + I + + Sbjct: 24 VLQLENINVS-FDGFQALTDLTLNIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGKAL 82 Query: 83 HGDSI 87 + SI Sbjct: 83 YDQSI 87 >gi|257465179|ref|ZP_05629550.1| ATP-dependent OLD family endonuclease [Actinobacillus minor 202] gi|257450839|gb|EEV24882.1| ATP-dependent OLD family endonuclease [Actinobacillus minor 202] Length = 586 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ IEI ++R E++ A L I+ GQN +GKS+L AI + F Sbjct: 1 MKIQSIEIKNWRSIKELKIA--AQDLMIIIGQNNHGKSNLLSAILFFFGEIKHHDL 54 >gi|238753938|ref|ZP_04615298.1| DNA repair protein recN [Yersinia ruckeri ATCC 29473] gi|238707926|gb|EEQ00284.1| DNA repair protein recN [Yersinia ruckeri ATCC 29473] Length = 553 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + IS+F E++ I+F LT + G+ G GKS +A+ Sbjct: 2 LAQLTISNFAIVRELE-IDFQPGLTTITGETGAGKSIAIDALGLCLG 47 >gi|228902692|ref|ZP_04066839.1| DNA repair protein recN [Bacillus thuringiensis IBL 4222] gi|228856879|gb|EEN01392.1| DNA repair protein recN [Bacillus thuringiensis IBL 4222] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|228910010|ref|ZP_04073830.1| DNA repair protein recN [Bacillus thuringiensis IBL 200] gi|228849527|gb|EEM94361.1| DNA repair protein recN [Bacillus thuringiensis IBL 200] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|228922929|ref|ZP_04086223.1| DNA repair protein recN [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836700|gb|EEM82047.1| DNA repair protein recN [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|228947891|ref|ZP_04110178.1| DNA repair protein recN [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811878|gb|EEM58212.1| DNA repair protein recN [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|228954460|ref|ZP_04116485.1| DNA repair protein recN [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805117|gb|EEM51711.1| DNA repair protein recN [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|228967215|ref|ZP_04128251.1| DNA repair protein recN [Bacillus thuringiensis serovar sotto str. T04001] gi|228792584|gb|EEM40150.1| DNA repair protein recN [Bacillus thuringiensis serovar sotto str. T04001] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|228941335|ref|ZP_04103887.1| DNA repair protein recN [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974267|ref|ZP_04134836.1| DNA repair protein recN [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228785317|gb|EEM33327.1| DNA repair protein recN [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818261|gb|EEM64334.1| DNA repair protein recN [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|228980860|ref|ZP_04141164.1| DNA repair protein recN [Bacillus thuringiensis Bt407] gi|228778796|gb|EEM27059.1| DNA repair protein recN [Bacillus thuringiensis Bt407] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229025636|ref|ZP_04182042.1| DNA repair protein recN [Bacillus cereus AH1272] gi|228735634|gb|EEL86223.1| DNA repair protein recN [Bacillus cereus AH1272] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|229031823|ref|ZP_04187811.1| DNA repair protein recN [Bacillus cereus AH1271] gi|228729441|gb|EEL80430.1| DNA repair protein recN [Bacillus cereus AH1271] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|229061864|ref|ZP_04199194.1| DNA repair protein recN [Bacillus cereus AH603] gi|228717425|gb|EEL69093.1| DNA repair protein recN [Bacillus cereus AH603] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229075882|ref|ZP_04208858.1| DNA repair protein recN [Bacillus cereus Rock4-18] gi|228707197|gb|EEL59394.1| DNA repair protein recN [Bacillus cereus Rock4-18] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229093233|ref|ZP_04224351.1| DNA repair protein recN [Bacillus cereus Rock3-42] gi|228690207|gb|EEL44001.1| DNA repair protein recN [Bacillus cereus Rock3-42] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229098646|ref|ZP_04229586.1| DNA repair protein recN [Bacillus cereus Rock3-29] gi|228684725|gb|EEL38663.1| DNA repair protein recN [Bacillus cereus Rock3-29] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229104802|ref|ZP_04235463.1| DNA repair protein recN [Bacillus cereus Rock3-28] gi|228678675|gb|EEL32891.1| DNA repair protein recN [Bacillus cereus Rock3-28] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229117671|ref|ZP_04247041.1| DNA repair protein recN [Bacillus cereus Rock1-3] gi|228665763|gb|EEL21235.1| DNA repair protein recN [Bacillus cereus Rock1-3] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229013392|ref|ZP_04170529.1| DNA repair protein recN [Bacillus mycoides DSM 2048] gi|229134996|ref|ZP_04263802.1| DNA repair protein recN [Bacillus cereus BDRD-ST196] gi|228648498|gb|EEL04527.1| DNA repair protein recN [Bacillus cereus BDRD-ST196] gi|228747804|gb|EEL97670.1| DNA repair protein recN [Bacillus mycoides DSM 2048] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|228960442|ref|ZP_04122093.1| DNA repair protein recN [Bacillus thuringiensis serovar pakistani str. T13001] gi|229047870|ref|ZP_04193446.1| DNA repair protein recN [Bacillus cereus AH676] gi|229111649|ref|ZP_04241199.1| DNA repair protein recN [Bacillus cereus Rock1-15] gi|229146749|ref|ZP_04275114.1| DNA repair protein recN [Bacillus cereus BDRD-ST24] gi|228636577|gb|EEK93042.1| DNA repair protein recN [Bacillus cereus BDRD-ST24] gi|228671784|gb|EEL27078.1| DNA repair protein recN [Bacillus cereus Rock1-15] gi|228723327|gb|EEL74696.1| DNA repair protein recN [Bacillus cereus AH676] gi|228799206|gb|EEM46172.1| DNA repair protein recN [Bacillus thuringiensis serovar pakistani str. T13001] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|229129454|ref|ZP_04258425.1| DNA repair protein recN [Bacillus cereus BDRD-Cer4] gi|229152376|ref|ZP_04280568.1| DNA repair protein recN [Bacillus cereus m1550] gi|228630984|gb|EEK87621.1| DNA repair protein recN [Bacillus cereus m1550] gi|228654059|gb|EEL09926.1| DNA repair protein recN [Bacillus cereus BDRD-Cer4] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|229157773|ref|ZP_04285848.1| DNA repair protein recN [Bacillus cereus ATCC 4342] gi|228625730|gb|EEK82482.1| DNA repair protein recN [Bacillus cereus ATCC 4342] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229163120|ref|ZP_04291076.1| DNA repair protein recN [Bacillus cereus R309803] gi|228620526|gb|EEK77396.1| DNA repair protein recN [Bacillus cereus R309803] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229168918|ref|ZP_04296635.1| DNA repair protein recN [Bacillus cereus AH621] gi|228614510|gb|EEK71618.1| DNA repair protein recN [Bacillus cereus AH621] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229174851|ref|ZP_04302371.1| DNA repair protein recN [Bacillus cereus MM3] gi|228608519|gb|EEK65821.1| DNA repair protein recN [Bacillus cereus MM3] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229186417|ref|ZP_04313581.1| DNA repair protein recN [Bacillus cereus BGSC 6E1] gi|228597044|gb|EEK54700.1| DNA repair protein recN [Bacillus cereus BGSC 6E1] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|229192386|ref|ZP_04319349.1| DNA repair protein recN [Bacillus cereus ATCC 10876] gi|228590963|gb|EEK48819.1| DNA repair protein recN [Bacillus cereus ATCC 10876] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|222097620|ref|YP_002531677.1| DNA repair protein recn [Bacillus cereus Q1] gi|229140908|ref|ZP_04269452.1| DNA repair protein recN [Bacillus cereus BDRD-ST26] gi|229198301|ref|ZP_04325008.1| DNA repair protein recN [Bacillus cereus m1293] gi|221241678|gb|ACM14388.1| DNA repair protein RecN [Bacillus cereus Q1] gi|228585180|gb|EEK43291.1| DNA repair protein recN [Bacillus cereus m1293] gi|228642484|gb|EEK98771.1| DNA repair protein recN [Bacillus cereus BDRD-ST26] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|218905310|ref|YP_002453144.1| DNA repair protein RecN [Bacillus cereus AH820] gi|218536540|gb|ACK88938.1| DNA repair protein RecN [Bacillus cereus AH820] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|206971339|ref|ZP_03232290.1| DNA repair protein RecN [Bacillus cereus AH1134] gi|229071681|ref|ZP_04204897.1| DNA repair protein recN [Bacillus cereus F65185] gi|229081433|ref|ZP_04213933.1| DNA repair protein recN [Bacillus cereus Rock4-2] gi|229180454|ref|ZP_04307796.1| DNA repair protein recN [Bacillus cereus 172560W] gi|206734111|gb|EDZ51282.1| DNA repair protein RecN [Bacillus cereus AH1134] gi|228602878|gb|EEK60357.1| DNA repair protein recN [Bacillus cereus 172560W] gi|228701848|gb|EEL54334.1| DNA repair protein recN [Bacillus cereus Rock4-2] gi|228711412|gb|EEL63371.1| DNA repair protein recN [Bacillus cereus F65185] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|222525285|ref|YP_002569756.1| SMC domain-containing protein [Chloroflexus sp. Y-400-fl] gi|222449164|gb|ACM53430.1| SMC domain protein [Chloroflexus sp. Y-400-fl] Length = 373 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 11/75 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWL-------FYGYT 78 +L I++ F+ E +EF+ L I+ G NG GKS++ +L Y Sbjct: 1 MQLQTIKVQGFKSIRE---LEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYV 57 Query: 79 QRRKHGDSIKKRSIK 93 R D I K Sbjct: 58 ARAGGADRILHFGQK 72 >gi|196046341|ref|ZP_03113567.1| DNA repair protein RecN [Bacillus cereus 03BB108] gi|225866156|ref|YP_002751534.1| DNA repair protein RecN [Bacillus cereus 03BB102] gi|196022811|gb|EDX61492.1| DNA repair protein RecN [Bacillus cereus 03BB108] gi|225790605|gb|ACO30822.1| DNA repair protein RecN [Bacillus cereus 03BB102] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|218899338|ref|YP_002447749.1| DNA repair protein RecN [Bacillus cereus G9842] gi|218543795|gb|ACK96189.1| DNA repair protein RecN [Bacillus cereus G9842] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|218231559|ref|YP_002368977.1| DNA repair protein RecN [Bacillus cereus B4264] gi|218159516|gb|ACK59508.1| DNA repair protein RecN [Bacillus cereus B4264] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|196034817|ref|ZP_03102224.1| DNA repair protein RecN [Bacillus cereus W] gi|196041535|ref|ZP_03108827.1| DNA repair protein RecN [Bacillus cereus NVH0597-99] gi|301055667|ref|YP_003793878.1| DNA repair protein [Bacillus anthracis CI] gi|195992356|gb|EDX56317.1| DNA repair protein RecN [Bacillus cereus W] gi|196027523|gb|EDX66138.1| DNA repair protein RecN [Bacillus cereus NVH0597-99] gi|300377836|gb|ADK06740.1| DNA repair protein [Bacillus cereus biovar anthracis str. CI] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|206976260|ref|ZP_03237168.1| DNA repair protein RecN [Bacillus cereus H3081.97] gi|217961664|ref|YP_002340234.1| DNA repair protein RecN [Bacillus cereus AH187] gi|206745456|gb|EDZ56855.1| DNA repair protein RecN [Bacillus cereus H3081.97] gi|217064009|gb|ACJ78259.1| DNA repair protein RecN [Bacillus cereus AH187] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|49478569|ref|YP_038235.1| DNA repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330125|gb|AAT60771.1| DNA repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|52141322|ref|YP_085507.1| DNA repair protein [Bacillus cereus E33L] gi|228916810|ref|ZP_04080375.1| DNA repair protein recN [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929220|ref|ZP_04092247.1| DNA repair protein recN [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935497|ref|ZP_04098315.1| DNA repair protein recN [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229123694|ref|ZP_04252889.1| DNA repair protein recN [Bacillus cereus 95/8201] gi|254721773|ref|ZP_05183562.1| DNA repair protein [Bacillus anthracis str. A1055] gi|51974791|gb|AAU16341.1| DNA repair protein [Bacillus cereus E33L] gi|228659829|gb|EEL15474.1| DNA repair protein recN [Bacillus cereus 95/8201] gi|228824249|gb|EEM70063.1| DNA repair protein recN [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830510|gb|EEM76120.1| DNA repair protein recN [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842997|gb|EEM88080.1| DNA repair protein recN [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|42783292|ref|NP_980539.1| DNA repair protein RecN [Bacillus cereus ATCC 10987] gi|42739220|gb|AAS43147.1| DNA repair protein RecN [Bacillus cereus ATCC 10987] Length = 583 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 6 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 60 Query: 89 KRSIKTPMP 97 + K + Sbjct: 61 YGTEKAEIE 69 >gi|30264249|ref|NP_846626.1| DNA repair protein RecN [Bacillus anthracis str. Ames] gi|47778289|ref|YP_021041.2| DNA repair protein RecN [Bacillus anthracis str. 'Ames Ancestor'] gi|49187076|ref|YP_030328.1| DNA repair protein RecN [Bacillus anthracis str. Sterne] gi|165873119|ref|ZP_02217736.1| DNA repair protein RecN [Bacillus anthracis str. A0488] gi|167633676|ref|ZP_02392000.1| DNA repair protein RecN [Bacillus anthracis str. A0442] gi|167641898|ref|ZP_02400136.1| DNA repair protein RecN [Bacillus anthracis str. A0193] gi|170709221|ref|ZP_02899644.1| DNA repair protein RecN [Bacillus anthracis str. A0389] gi|177654841|ref|ZP_02936598.1| DNA repair protein RecN [Bacillus anthracis str. A0174] gi|190566084|ref|ZP_03019003.1| DNA repair protein RecN [Bacillus anthracis Tsiankovskii-I] gi|227816950|ref|YP_002816959.1| DNA repair protein RecN [Bacillus anthracis str. CDC 684] gi|229602126|ref|YP_002868468.1| DNA repair protein RecN [Bacillus anthracis str. A0248] gi|254683938|ref|ZP_05147798.1| DNA repair protein RecN [Bacillus anthracis str. CNEVA-9066] gi|254736286|ref|ZP_05193992.1| DNA repair protein RecN [Bacillus anthracis str. Western North America USA6153] gi|254741324|ref|ZP_05199011.1| DNA repair protein RecN [Bacillus anthracis str. Kruger B] gi|254754042|ref|ZP_05206077.1| DNA repair protein RecN [Bacillus anthracis str. Vollum] gi|254757913|ref|ZP_05209940.1| DNA repair protein RecN [Bacillus anthracis str. Australia 94] gi|30258894|gb|AAP28112.1| DNA repair protein RecN [Bacillus anthracis str. Ames] gi|47551994|gb|AAT33516.2| DNA repair protein RecN [Bacillus anthracis str. 'Ames Ancestor'] gi|49181003|gb|AAT56379.1| DNA repair protein RecN [Bacillus anthracis str. Sterne] gi|164711133|gb|EDR16693.1| DNA repair protein RecN [Bacillus anthracis str. A0488] gi|167510141|gb|EDR85549.1| DNA repair protein RecN [Bacillus anthracis str. A0193] gi|167531082|gb|EDR93769.1| DNA repair protein RecN [Bacillus anthracis str. A0442] gi|170125883|gb|EDS94787.1| DNA repair protein RecN [Bacillus anthracis str. A0389] gi|172080502|gb|EDT65588.1| DNA repair protein RecN [Bacillus anthracis str. A0174] gi|190563003|gb|EDV16969.1| DNA repair protein RecN [Bacillus anthracis Tsiankovskii-I] gi|227004801|gb|ACP14544.1| DNA repair protein RecN [Bacillus anthracis str. CDC 684] gi|229266534|gb|ACQ48171.1| DNA repair protein RecN [Bacillus anthracis str. A0248] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|14798|emb|CAA38323.1| 18 [Enterobacteria phage BF23] Length = 545 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++ S+ + + I F + +T + G NG GKS+++ IE LFY R D Sbjct: 4 ITIKTLKFSNVMSYGKDIVIHFDKNPVTQLIGGNGLGKSTIATVIEELFYNKNSRGIKKD 63 Query: 86 SI 87 ++ Sbjct: 64 AL 65 >gi|163941932|ref|YP_001646816.1| DNA repair protein RecN [Bacillus weihenstephanensis KBAB4] gi|163864129|gb|ABY45188.1| DNA repair protein RecN [Bacillus weihenstephanensis KBAB4] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|120556271|ref|YP_960622.1| DNA repair protein RecN [Marinobacter aquaeolei VT8] gi|120326120|gb|ABM20435.1| DNA replication and repair protein RecN [Marinobacter aquaeolei VT8] Length = 559 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + +S++ E +++F +T + G+ G GKS + +A+ G Sbjct: 2 LTQLTVSNY-AIAERVELQFNRGMTALTGETGAGKSIVLDALGLAMGG 48 >gi|163847436|ref|YP_001635480.1| SMC domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|163668725|gb|ABY35091.1| SMC domain protein [Chloroflexus aurantiacus J-10-fl] Length = 379 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 11/75 (14%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWL-------FYGYT 78 +L I++ F+ E +EF+ L I+ G NG GKS++ +L Y Sbjct: 7 MQLQTIKVQGFKSIRE---LEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYV 63 Query: 79 QRRKHGDSIKKRSIK 93 R D I K Sbjct: 64 ARAGGADRILHFGQK 78 >gi|75761081|ref|ZP_00741078.1| DNA repair protein recN [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491423|gb|EAO54642.1| DNA repair protein recN [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 600 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 23 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 77 Query: 89 KRSIKTPMP 97 + K + Sbjct: 78 YGTEKAEIE 86 >gi|47570401|ref|ZP_00241040.1| DNA repair protein RecN [Bacillus cereus G9241] gi|47552925|gb|EAL11337.1| DNA repair protein RecN [Bacillus cereus G9241] Length = 579 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E I F LT+++G+ G GKS + +AI L G R + ++ Sbjct: 2 LSELSIRNF-AIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 YGTEKAEIE 65 >gi|258447482|ref|ZP_05695626.1| nuclease sbcCD subunit C [Staphylococcus aureus A6300] gi|257853673|gb|EEV76632.1| nuclease sbcCD subunit C [Staphylococcus aureus A6300] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|242240622|ref|YP_002988803.1| recombination and repair protein [Dickeya dadantii Ech703] gi|242132679|gb|ACS86981.1| DNA repair protein RecN [Dickeya dadantii Ech703] Length = 553 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQTGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|205372121|ref|ZP_03224937.1| ATP-dependent OLD family endonuclease [Bacillus coahuilensis m4-4] Length = 479 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++ ++ I +FR + I+ +D+ ++ G N GK++L +AI+ Sbjct: 3 IRIKELRIRNFRSYKS-ADIDLSDNCVLI-GANNVGKTTLLQAIQ 45 >gi|86136264|ref|ZP_01054843.1| hypothetical protein MED193_19114 [Roseobacter sp. MED193] gi|85827138|gb|EAQ47334.1| hypothetical protein MED193_19114 [Roseobacter sp. MED193] Length = 881 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I + + R FT+ +I L ++ N GKS++ +A+ +F+ Sbjct: 1 MKICAIRLENVRRFTDPVEITGIGSGLNVLAAPNEQGKSTIFDALHAVFF 50 >gi|331701591|ref|YP_004398550.1| hypothetical protein Lbuc_1232 [Lactobacillus buchneri NRRL B-30929] gi|329128934|gb|AEB73487.1| hypothetical protein Lbuc_1232 [Lactobacillus buchneri NRRL B-30929] Length = 860 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR--RKHGDS 86 + + I F + + QKI+ + L ++ G N GKS++ I+ + +G+T + HG Sbjct: 3 IKQLNIYGFGRWID-QKIDIKNPLQMIYGPNEAGKSTIIAFIKGILFGFTDKKHSIHGQY 61 Query: 87 IKKRS 91 K S Sbjct: 62 QPKGS 66 >gi|314933525|ref|ZP_07840890.1| exonuclease SbcC [Staphylococcus caprae C87] gi|313653675|gb|EFS17432.1| exonuclease SbcC [Staphylococcus caprae C87] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L++++++F F I F+ + L +++G+ G GK+ + +AI + +G + + Sbjct: 1 MKPLNLKLNNFGPFLNET-INFSQIENNELFLISGKTGSGKTMIFDAIVYSLFGEASTKN 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + ++ PM + Sbjct: 60 RKEGDLRSHFANGKEPMSV 78 >gi|300858238|ref|YP_003783221.1| hypothetical protein cpfrc_00820 [Corynebacterium pseudotuberculosis FRC41] gi|300685692|gb|ADK28614.1| hypothetical protein cpfrc_00820 [Corynebacterium pseudotuberculosis FRC41] gi|302205960|gb|ADL10302.1| ATP-binding protein [Corynebacterium pseudotuberculosis C231] gi|302330513|gb|ADL20707.1| ATP-binding protein [Corynebacterium pseudotuberculosis 1002] gi|308276195|gb|ADO26094.1| ATP-binding protein [Corynebacterium pseudotuberculosis I19] Length = 857 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRK 82 ++ IEI R ++ + + + +++G N GKS++ EAI ++ Sbjct: 1 MRIHAIEIQDMRSIGHLELQDLPEKGVIVISGDNELGKSTIMEAIAITLGEQHSTGKKNI 60 Query: 83 HGDSIKKRSIKTPMPMCMAV 102 + + T + + Sbjct: 61 RDIKPVDKDVPTKTSLTATI 80 >gi|297797105|ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arabidopsis lyrata subsp. lyrata] gi|297312272|gb|EFH42696.1| hypothetical protein ARALYDRAFT_496305 [Arabidopsis lyrata subsp. lyrata] Length = 1057 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L I++ +F + +Q IEF + + + GQNG GKS++ A+ F + + ++K Sbjct: 22 ILRIKVENFMCHSNLQ-IEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLK 80 Query: 89 K 89 Sbjct: 81 D 81 >gi|291167013|gb|EFE29059.1| ABC transporter, ATP-binding protein [Filifactor alocis ATCC 35896] Length = 239 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 F ++K+ F +T G+NG GKS+L EAI Sbjct: 27 FQNVEKLSFQKPVTFFVGENGSGKSTLLEAI 57 >gi|269202969|ref|YP_003282238.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ED98] gi|262075259|gb|ACY11232.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ED98] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|217421572|ref|ZP_03453076.1| SMC domain protein [Burkholderia pseudomallei 576] gi|217395314|gb|EEC35332.1| SMC domain protein [Burkholderia pseudomallei 576] Length = 497 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ + + + + + V G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELLQW-DYCQRITLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLECSGGRNYK 59 Query: 85 DSIKKRSIKT 94 + + T Sbjct: 60 TYARHANADT 69 >gi|237812763|ref|YP_002897214.1| SMC domain protein [Burkholderia pseudomallei MSHR346] gi|254197378|ref|ZP_04903800.1| conserved hypothetical protein [Burkholderia pseudomallei S13] gi|169654119|gb|EDS86812.1| conserved hypothetical protein [Burkholderia pseudomallei S13] gi|237505264|gb|ACQ97582.1| SMC domain protein [Burkholderia pseudomallei MSHR346] Length = 936 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ + + + + + V G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELLQW-DYCQRITLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLECSGGRNYK 59 Query: 85 DSIKKRSIKT 94 + + T Sbjct: 60 TYARHANADT 69 >gi|154487282|ref|ZP_02028689.1| hypothetical protein BIFADO_01126 [Bifidobacterium adolescentis L2-32] gi|154083800|gb|EDN82845.1| hypothetical protein BIFADO_01126 [Bifidobacterium adolescentis L2-32] Length = 238 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D +S I ++EF ++T + G+NG GKS+L E I + + + Sbjct: 16 LTDSYVSRIPSLRSIDELEFHKNVTFLVGENGSGKSTLLEGIAVACGFNAEGGTR--NYR 73 Query: 89 KRSIKTPMPMCMAV 102 + + A+ Sbjct: 74 FSTYDDTSDLAKAM 87 >gi|76809900|ref|YP_333935.1| hypothetical protein BURPS1710b_2543 [Burkholderia pseudomallei 1710b] gi|254179357|ref|ZP_04885956.1| putative RecF/RecN/SMC N terminal domain [Burkholderia pseudomallei 1655] gi|254189254|ref|ZP_04895765.1| putative RecF/RecN/SMC N terminal domain [Burkholderia pseudomallei Pasteur 52237] gi|76579353|gb|ABA48828.1| hypothetical protein BURPS1710b_2543 [Burkholderia pseudomallei 1710b] gi|157936933|gb|EDO92603.1| putative RecF/RecN/SMC N terminal domain [Burkholderia pseudomallei Pasteur 52237] gi|184209897|gb|EDU06940.1| putative RecF/RecN/SMC N terminal domain [Burkholderia pseudomallei 1655] Length = 936 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L +E+ + + + + + V G NG GK++L +A+ L + R + Sbjct: 1 MFHLQTLELLQW-DYCQRITLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLECSGGRNYK 59 Query: 85 DSIKKRSIKT 94 + + T Sbjct: 60 TYARHANADT 69 >gi|15924336|ref|NP_371870.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus Mu50] gi|15926927|ref|NP_374460.1| hypothetical protein SA1181 [Staphylococcus aureus subsp. aureus N315] gi|148267835|ref|YP_001246778.1| DNA repair ATPase-like protein [Staphylococcus aureus subsp. aureus JH9] gi|150393897|ref|YP_001316572.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus JH1] gi|156979666|ref|YP_001441925.1| hypothetical protein SAHV_1335 [Staphylococcus aureus subsp. aureus Mu3] gi|255006134|ref|ZP_05144735.2| hypothetical protein SauraM_06685 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795597|ref|ZP_05644576.1| nuclease sbcCD subunit C [Staphylococcus aureus A9781] gi|258413407|ref|ZP_05681683.1| nuclease sbcCD subunit C [Staphylococcus aureus A9763] gi|258420484|ref|ZP_05683426.1| nuclease sbcCD subunit C [Staphylococcus aureus A9719] gi|258434740|ref|ZP_05688814.1| nuclease sbcCD subunit C [Staphylococcus aureus A9299] gi|258444684|ref|ZP_05693013.1| nuclease sbcCD subunit C [Staphylococcus aureus A8115] gi|258449323|ref|ZP_05697426.1| nuclease sbcCD subunit C [Staphylococcus aureus A6224] gi|258454704|ref|ZP_05702668.1| nuclease sbcCD subunit C [Staphylococcus aureus A5937] gi|282892836|ref|ZP_06301071.1| nuclease sbcCD subunit C [Staphylococcus aureus A8117] gi|282929161|ref|ZP_06336741.1| nuclease sbcCD subunit C [Staphylococcus aureus A10102] gi|295406289|ref|ZP_06816096.1| nuclease sbcCD subunit C [Staphylococcus aureus A8819] gi|296275382|ref|ZP_06857889.1| hypothetical protein SauraMR_03520 [Staphylococcus aureus subsp. aureus MR1] gi|297244518|ref|ZP_06928401.1| nuclease sbcCD subunit C [Staphylococcus aureus A8796] gi|81832513|sp|Q7A5S6|SBCC_STAAN RecName: Full=Nuclease sbcCD subunit C gi|81855938|sp|Q99UD0|SBCC_STAAM RecName: Full=Nuclease sbcCD subunit C gi|190360278|sp|A7X203|SBCC_STAA1 RecName: Full=Nuclease sbcCD subunit C gi|190360279|sp|A6U1G7|SBCC_STAA2 RecName: Full=Nuclease sbcCD subunit C gi|190360281|sp|A5ISM9|SBCC_STAA9 RecName: Full=Nuclease sbcCD subunit C gi|13701144|dbj|BAB42439.1| SA1181 [Staphylococcus aureus subsp. aureus N315] gi|14247117|dbj|BAB57508.1| similar to exonuclease SbcC [Staphylococcus aureus subsp. aureus Mu50] gi|147740904|gb|ABQ49202.1| ATPase involved in DNA repair-like protein [Staphylococcus aureus subsp. aureus JH9] gi|149946349|gb|ABR52285.1| putative exonuclease SbcC [Staphylococcus aureus subsp. aureus JH1] gi|156721801|dbj|BAF78218.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257789569|gb|EEV27909.1| nuclease sbcCD subunit C [Staphylococcus aureus A9781] gi|257839971|gb|EEV64439.1| nuclease sbcCD subunit C [Staphylococcus aureus A9763] gi|257843432|gb|EEV67839.1| nuclease sbcCD subunit C [Staphylococcus aureus A9719] gi|257849101|gb|EEV73083.1| nuclease sbcCD subunit C [Staphylococcus aureus A9299] gi|257850177|gb|EEV74130.1| nuclease sbcCD subunit C [Staphylococcus aureus A8115] gi|257857311|gb|EEV80209.1| nuclease sbcCD subunit C [Staphylococcus aureus A6224] gi|257863087|gb|EEV85851.1| nuclease sbcCD subunit C [Staphylococcus aureus A5937] gi|282589264|gb|EFB94359.1| nuclease sbcCD subunit C [Staphylococcus aureus A10102] gi|282764833|gb|EFC04958.1| nuclease sbcCD subunit C [Staphylococcus aureus A8117] gi|294968877|gb|EFG44899.1| nuclease sbcCD subunit C [Staphylococcus aureus A8819] gi|297178548|gb|EFH37794.1| nuclease sbcCD subunit C [Staphylococcus aureus A8796] gi|312829743|emb|CBX34585.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131148|gb|EFT87132.1| hypothetical protein CGSSa03_06384 [Staphylococcus aureus subsp. aureus CGS03] gi|329727458|gb|EGG63914.1| exonuclease SbcCD, C subunit [Staphylococcus aureus subsp. aureus 21172] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|285817025|gb|ADC37512.1| Exonuclease SbcC [Staphylococcus aureus 04-02981] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|282877403|ref|ZP_06286226.1| DNA replication and repair protein RecF [Prevotella buccalis ATCC 35310] gi|281300455|gb|EFA92801.1| DNA replication and repair protein RecF [Prevotella buccalis ATCC 35310] Length = 405 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ ++ + F+ L + G NG GK++L +A+ +L + + Sbjct: 18 LKKISILNYKNI-QVADLTFSPKLNCLIGHNGEGKTNLLDAVYYLSFCRSA 67 >gi|254423499|ref|ZP_05037217.1| DNA repair protein RecN [Synechococcus sp. PCC 7335] gi|196190988|gb|EDX85952.1| DNA repair protein RecN [Synechococcus sp. PCC 7335] Length = 637 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ ++I +F + ++E L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LVSLKIENF-ALIDQLELELKPGLNVLTGETGAGKSIILDAIDAVLGGKASGR 53 >gi|121535547|ref|ZP_01667355.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1] gi|121305875|gb|EAX46809.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1] Length = 396 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 14/95 (14%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-------R 80 ++ ++ + ++R ++ ++ LT G NG GKS++ + +L ++ R Sbjct: 7 RIEELSVKNYRALKDL-RLNGITPLTAFLGPNGSGKSTVLDVFAFLAECFSSGLRKAWDR 65 Query: 81 RKHGDSIKKRSIKTPMPM------CMAVPRCKYQL 109 R ++ R P+ + PR Y L Sbjct: 66 RGRFKELRTRGASGPIVIELKYRENSQSPRITYHL 100 >gi|28867287|ref|NP_789906.1| hypothetical protein PSPTO_0046 [Pseudomonas syringae pv. tomato str. DC3000] gi|28850521|gb|AAO53601.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 661 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEI-QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +S FR F + + +T + G N GK++L A+ LF +R Sbjct: 1 MLIESAVLSGFRCFAPRPISVTISPKITTIVGPNAAGKTALLHALAKLFGVTRAQR 56 >gi|304398634|ref|ZP_07380506.1| DNA repair protein RecN [Pantoea sp. aB] gi|304353845|gb|EFM18220.1| DNA repair protein RecN [Pantoea sp. aB] Length = 553 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + IS+F E+ I+F +T + G+ G GKS +A+ D+ Sbjct: 2 LAQLTISNFAIVRELD-IDFQRGMTAITGETGAGKSIAIDALGLCLGD------RADADM 54 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 R + +C ++QLK Sbjct: 55 VRQGASRADLC-----ARFQLK 71 >gi|288802280|ref|ZP_06407720.1| RecF protein [Prevotella melaninogenica D18] gi|288335247|gb|EFC73682.1| RecF protein [Prevotella melaninogenica D18] Length = 368 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + L G NG GK++L +A+ +L + + Sbjct: 1 MQLEKLSIINYKNIQAAT-LNLSAKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VMRHDAD 66 >gi|254671011|emb|CBA07790.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 349 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +E+++F EF+++L ++ +NG GK+ L + + L + + Sbjct: 6 YIQSLELTNF-TVLPNDTFEFSENLNVIVAENGCGKTHLLKILYSLLEVTSNTKNR 60 >gi|238922637|ref|YP_002936150.1| hypothetical protein EUBREC_0212 [Eubacterium rectale ATCC 33656] gi|238874309|gb|ACR74016.1| hypothetical protein EUBREC_0212 [Eubacterium rectale ATCC 33656] gi|291526441|emb|CBK92028.1| ABC-type multidrug transport system, ATPase component [Eubacterium rectale DSM 17629] Length = 220 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-GDSIKKRSIK 93 I+F + + + G NG GKS++ + + + + + G IK+ + Sbjct: 21 SIKFENGIYGLIGPNGSGKSTIMNIMSDVLDMSSGKILYNGTDIKELDDR 70 >gi|121635740|ref|YP_975985.1| putative ATP-binding protein [Neisseria meningitidis FAM18] gi|161869110|ref|YP_001598276.1| ATP-binding protein [Neisseria meningitidis 053442] gi|120867446|emb|CAM11218.1| putative ATP-binding protein [Neisseria meningitidis FAM18] gi|161594663|gb|ABX72323.1| ATP-binding protein [Neisseria meningitidis 053442] gi|254673452|emb|CBA08820.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|325131325|gb|EGC54036.1| hypothetical protein NMBM6190_2007 [Neisseria meningitidis M6190] gi|325137354|gb|EGC59942.1| hypothetical protein NMBES14902_1984 [Neisseria meningitidis ES14902] gi|325141358|gb|EGC63841.1| hypothetical protein NMB9615945_2024 [Neisseria meningitidis 961-5945] gi|325199173|gb|ADY94629.1| conserved hypothetical protein [Neisseria meningitidis G2136] gi|325206986|gb|ADZ02439.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 349 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +E+++F EF+++L ++ +NG GK+ L + + L + + Sbjct: 6 YIQSLELTNF-TVLPNDTFEFSENLNVIVAENGCGKTHLLKILYSLLEVTSNTKNR 60 >gi|49481979|gb|AAT66701.1| DNA repair and genetic recombination protein [Geobacillus thermoglucosidasius] Length = 573 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ +F E + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LAELSXKNF-AINESLSVSFDKGLTVLTGETGAGKSIIIDAIQLLIGG 48 >gi|15677905|ref|NP_275073.1| hypothetical protein NMB2085 [Neisseria meningitidis MC58] gi|218767347|ref|YP_002341859.1| putative ATP-binding protein [Neisseria meningitidis Z2491] gi|304388716|ref|ZP_07370774.1| probable ATP-binding protein [Neisseria meningitidis ATCC 13091] gi|7227347|gb|AAF42402.1| hypothetical protein NMB2085 [Neisseria meningitidis MC58] gi|121051355|emb|CAM07646.1| putative ATP-binding protein [Neisseria meningitidis Z2491] gi|304337280|gb|EFM03456.1| probable ATP-binding protein [Neisseria meningitidis ATCC 13091] gi|308390184|gb|ADO32504.1| hypothetical protein NMBB_2397 [Neisseria meningitidis alpha710] gi|316983975|gb|EFV62954.1| ATP-binding protein [Neisseria meningitidis H44/76] gi|319409607|emb|CBY89906.1| putative ATP-binding protein [Neisseria meningitidis WUE 2594] gi|325127359|gb|EGC50294.1| hypothetical protein NMXN1568_1953 [Neisseria meningitidis N1568] gi|325129293|gb|EGC52131.1| hypothetical protein NMBOX9930304_1906 [Neisseria meningitidis OX99.30304] gi|325133260|gb|EGC55926.1| hypothetical protein NMBM13399_2083 [Neisseria meningitidis M13399] gi|325135313|gb|EGC57934.1| hypothetical protein NMBM0579_1979 [Neisseria meningitidis M0579] gi|325139405|gb|EGC61945.1| hypothetical protein NMBCU385_1819 [Neisseria meningitidis CU385] gi|325143496|gb|EGC65817.1| hypothetical protein NMBM01240013_2037 [Neisseria meningitidis M01-240013] gi|325201130|gb|ADY96585.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325201280|gb|ADY96734.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325208934|gb|ADZ04386.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 349 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +E+++F EF+++L ++ +NG GK+ L + + L + + Sbjct: 6 YIQSLELTNF-TVLPNDTFEFSENLNVIVAENGCGKTHLLKILYSLLEVTSNTKNR 60 >gi|323441130|gb|EGA98837.1| exonuclease [Staphylococcus aureus O11] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|297806795|ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] Length = 1063 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ I + +F + ++ IEF D + + GQNG GKS++ A+ F + + ++K Sbjct: 22 IVRIRLENFMCHSNLE-IEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLK 80 Query: 89 K 89 Sbjct: 81 D 81 >gi|226314387|ref|YP_002774283.1| hypothetical protein BBR47_48020 [Brevibacillus brevis NBRC 100599] gi|226097337|dbj|BAH45779.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 731 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 11/72 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++ + F + + FA + + N GKS++ + I YG Sbjct: 1 MKIEELVLGSFGKWQD-ASFRFAPGINLFYAPNESGKSTILQGIFAALYG---------- 49 Query: 87 IKKRSIKTPMPM 98 +K+ +KT + Sbjct: 50 MKRDYVKTARYL 61 >gi|323443998|gb|EGB01609.1| exonuclease [Staphylococcus aureus O46] Length = 1009 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|315122996|ref|YP_004065002.1| exonuclease sbcCD subunit C [Pseudoalteromonas sp. SM9913] gi|315016756|gb|ADT70093.1| exonuclease sbcCD subunit C [Pseudoalteromonas sp. SM9913] Length = 1216 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 8/66 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I + + + I+F L + G G GKS++ +AI Y T Sbjct: 1 MKITAVRIHNLASIADAE-IDFLASPLKDAGLFAITGDTGAGKSTVLDAICLALYTKTA- 58 Query: 81 RKHGDS 86 R GD Sbjct: 59 RLKGDK 64 >gi|315504934|ref|YP_004083821.1| hypothetical protein ML5_4162 [Micromonospora sp. L5] gi|315411553|gb|ADU09670.1| hypothetical protein ML5_4162 [Micromonospora sp. L5] Length = 663 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 16/41 (39%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + F LT + N GK+S E I W G + G Sbjct: 67 TTLRFGSGLTALVAHNLKGKTSALELITWCLRGRHRDDLQG 107 >gi|257064761|ref|YP_003144433.1| predicted ATPase [Slackia heliotrinireducens DSM 20476] gi|256792414|gb|ACV23084.1| predicted ATPase [Slackia heliotrinireducens DSM 20476] Length = 236 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + FA ++T G+NG GKS+L EAI F Sbjct: 23 VRGIPAIASMGTVNFAGNVTFFVGENGSGKSTLLEAIAMAFG 64 >gi|257060274|ref|YP_003138162.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 8802] gi|256590440|gb|ACV01327.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 8802] Length = 661 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 12/81 (14%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYG-----Y 77 ++ + +F + I + + G NG GK++L +AI YG Sbjct: 4 TELVLENFGPYAGKNIINLRPEANNNPCPIILFGGMNGGGKTTLMDAIRLALYGPRAQCS 63 Query: 78 TQRRKHGDSIKKRSIKTPMPM 98 T+ + +++ T P+ Sbjct: 64 TRNNLSYNDFLTQAVNTQTPI 84 >gi|218247196|ref|YP_002372567.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 8801] gi|218167674|gb|ACK66411.1| DNA sulfur modification protein DndD [Cyanothece sp. PCC 8801] Length = 661 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 12/81 (14%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYG-----Y 77 ++ + +F + I + + G NG GK++L +AI YG Sbjct: 4 TELVLENFGPYAGKNIINLRPEANNNPCPIILFGGMNGGGKTTLMDAIRLALYGPRAQCS 63 Query: 78 TQRRKHGDSIKKRSIKTPMPM 98 T+ + +++ T P+ Sbjct: 64 TRNNLSYNDFLTQAVNTQTPI 84 >gi|189346160|ref|YP_001942689.1| DNA repair protein RecN [Chlorobium limicola DSM 245] gi|189340307|gb|ACD89710.1| DNA repair protein RecN [Chlorobium limicola DSM 245] Length = 568 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I +F E+ +EF+ L I+ G+ G GKS L A+ + + Sbjct: 2 LSSLYIRNFALIRELT-VEFSRGLCIITGETGAGKSMLIGALSLVLGERSSSDL 54 >gi|302346673|ref|YP_003814971.1| DNA replication and repair protein RecF [Prevotella melaninogenica ATCC 25845] gi|302150770|gb|ADK97031.1| DNA replication and repair protein RecF [Prevotella melaninogenica ATCC 25845] Length = 368 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + L G NG GK++L +A+ +L + + Sbjct: 1 MQLEKLSIINYKNIQAAT-LNLSAKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VMRHDAD 66 >gi|237807926|ref|YP_002892366.1| hypothetical protein Tola_1158 [Tolumonas auensis DSM 9187] gi|237500187|gb|ACQ92780.1| conserved hypothetical protein [Tolumonas auensis DSM 9187] Length = 487 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+ + + F+G + I + +T++ G N GKS++ A+ +L+ R Sbjct: 1 MKIKSLIVGGFKGVQDKVIIPLS-SITLLFGANSTGKSTVLHALLYLYEVIVARN 54 >gi|332982818|ref|YP_004464259.1| AAA ATPase [Mahella australiensis 50-1 BON] gi|332700496|gb|AEE97437.1| AAA ATPase [Mahella australiensis 50-1 BON] Length = 539 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVN-GQNGYGKSSLSEAIEWLFYG---YTQRRK 82 +L I I H+R E ++ + +V G N GKS++ AI L Sbjct: 1 MRLEAILIKHYRSI-ERVALKLPQNKPLVLFGPNNAGKSNILSAINRLLGERYPTYIEML 59 Query: 83 HGDSIKKRSIKTP 95 D K+ + P Sbjct: 60 ESDYFKRNQSEYP 72 >gi|302188071|ref|ZP_07264744.1| hypothetical protein Psyrps6_17078 [Pseudomonas syringae pv. syringae 642] Length = 784 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRRKHG 84 ++ +EI++FR +I+ + T++ G N GKSS A+ G + R Sbjct: 1 MQIKHLEIANFRKLHS-VRIDLSAETTLLVGANNSGKSSAMLALRKFLGGKASAIRLQD 58 >gi|282919058|ref|ZP_06326793.1| nuclease sbcCD subunit [Staphylococcus aureus subsp. aureus C427] gi|282316868|gb|EFB47242.1| nuclease sbcCD subunit [Staphylococcus aureus subsp. aureus C427] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|227510551|ref|ZP_03940600.1| DNA repair ATPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190203|gb|EEI70270.1| DNA repair ATPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 848 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR--KHG 84 + ++I + + + +I F L ++ G N GKS++ + I + +G+ +R HG Sbjct: 1 MTIDYLKIYGYGKWID-TEISFNQSLEMIYGPNEAGKSTIIDFIISVLFGFQSKRQAIHG 59 Query: 85 DSIKKRSIK 93 I K Sbjct: 60 QYIPKNHQD 68 >gi|225574746|ref|ZP_03783356.1| hypothetical protein RUMHYD_02823 [Blautia hydrogenotrophica DSM 10507] gi|225038037|gb|EEG48283.1| hypothetical protein RUMHYD_02823 [Blautia hydrogenotrophica DSM 10507] Length = 106 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ-RRKHGDSIKK 89 ++++ FR ++ QKI+ +T + G N GKS++ + ++ + K+G +I Sbjct: 4 ELQLDDFR-ISKNQKIKLGKAITAIAGHNATGKSTILG----ILGNSSELKSKYGTTITD 58 Query: 90 RSIKTP 95 + KT Sbjct: 59 KQFKTE 64 >gi|170590488|ref|XP_001900004.1| SMC family, C-terminal domain containing protein [Brugia malayi] gi|158592636|gb|EDP31234.1| SMC family, C-terminal domain containing protein [Brugia malayi] Length = 1098 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ IE+ +F E KI F + + G NG GKS+L A+ G + + G Sbjct: 44 RIASIELFNFMCH-ESLKINFDLSNRNCFFIGGSNGSGKSALFAALNMGLGGRGSQNERG 102 Query: 85 DSIKK 89 +++K+ Sbjct: 103 NAMKQ 107 >gi|160902942|ref|YP_001568523.1| ATP-dependent OLD family endonuclease [Petrotoga mobilis SJ95] gi|160360586|gb|ABX32200.1| ATP-dependent endonuclease of the OLD family [Petrotoga mobilis SJ95] Length = 573 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ I I +FR + + D ++ G N GKS++ A+ +FY + + D Sbjct: 1 MKIKSITIHNFRSLKD-AMFDLYD-YNVLVGANNVGKSNVLTALR-IFYENEKYNEKFDF 57 Query: 87 IKKRSIKTP 95 K ++ Sbjct: 58 PKFQTDDNE 66 >gi|118471016|ref|YP_887298.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118172303|gb|ABK73199.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 270 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 A L + L ++ F+ + F L + G NG GK+++ +AI Sbjct: 22 AEYLEVRGLTVDFDGFKAVNGVDLTLFQGDLRFLIGPNGAGKTTVIDAIT 71 >gi|116872490|ref|YP_849271.1| hypothetical protein lwe1074 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741368|emb|CAK20492.1| hypothetical protein lwe1074 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 627 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 31 DIEISHFR--GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + FR G + F L ++G GK+++ E I++ + I+ Sbjct: 2 KLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKS----YIE 57 Query: 89 KRSIKTPMPMCMAVPRCKYQLK 110 T + + + + Y++K Sbjct: 58 VGQKCTDIELEIILDNTTYKIK 79 >gi|77360161|ref|YP_339736.1| DNA repair protein recN [Pseudoalteromonas haloplanktis TAC125] gi|76875072|emb|CAI86293.1| DNA repair protein recN [Pseudoalteromonas haloplanktis TAC125] Length = 557 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ +EI +F E+ + +T + G+ G GKS +A+ + Sbjct: 2 LIGLEIKNF-AIVSNLSTEWQNGMTAITGETGAGKSIAIDALSLCLGERAEAS 53 >gi|327192780|gb|EGE59709.1| DNA replication and repair protein [Rhizobium etli CNPAF512] Length = 442 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + + ++ G NG GK++L EA+ L G RR +GD Sbjct: 73 VSLSRLKLTDFRNYAA-VSLALDGRHAVLTGNNGAGKTNLMEAVSLLSPGRGLRRAAYGD 131 >gi|282899814|ref|ZP_06307776.1| ATPase [Cylindrospermopsis raciborskii CS-505] gi|281195296|gb|EFA70231.1| ATPase [Cylindrospermopsis raciborskii CS-505] Length = 353 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 8/77 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT-------IVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +++ F+ F +F D T ++ G NG GK+SL + I T Sbjct: 1 MKIQSLDLRSFKKFRSST-FDFTDPETGLARDIIVLIGMNGAGKTSLLQVIAATVGTATG 59 Query: 80 RRKHGDSIKKRSIKTPM 96 R K ++ + Sbjct: 60 RLKKPSDLEWAGFNYEL 76 >gi|266626153|ref|ZP_06119088.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288861939|gb|EFC94237.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 198 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + RK KL I+I + G E E ++G+NG GK+S+ +AI + R Sbjct: 3 HRRKSSVKLTKIKIKNLFGIKE---YEADGQSVELSGRNGAGKTSVIDAIRLALTNRSDR 59 >gi|271499341|ref|YP_003332366.1| DNA repair protein RecN [Dickeya dadantii Ech586] gi|270342896|gb|ACZ75661.1| DNA repair protein RecN [Dickeya dadantii Ech586] Length = 553 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQAGMSVITGETGAGKSIAIDALGLCLGNRSDANM 54 >gi|223043119|ref|ZP_03613166.1| hypothetical protein STACA0001_1594 [Staphylococcus capitis SK14] gi|222443330|gb|EEE49428.1| hypothetical protein STACA0001_1594 [Staphylococcus capitis SK14] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L++++++F F I F+ + L +++G+ G GK+ + +AI + +G + + Sbjct: 1 MKPLNLKLNNFGPFLNET-INFSQIENNELFLISGKTGSGKTMIFDAIVYSLFGEASTKN 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + ++ PM + Sbjct: 60 RKEGDLRSHFASGKEPMSV 78 >gi|242809237|ref|XP_002485327.1| structural maintenance of chromosome complex subunit SmcA [Talaromyces stipitatus ATCC 10500] gi|218715952|gb|EED15374.1| structural maintenance of chromosome complex subunit SmcA [Talaromyces stipitatus ATCC 10500] Length = 1234 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +++ F +T + F L ++ G NG GKS+L AI Sbjct: 143 IVRMKLKDFVTYT-NVEYHFGSQLNMIIGPNGTGKSTLVCAI 183 >gi|212537423|ref|XP_002148867.1| structural maintenance of chromosome complex subunit SmcA [Penicillium marneffei ATCC 18224] gi|210068609|gb|EEA22700.1| structural maintenance of chromosome complex subunit SmcA [Penicillium marneffei ATCC 18224] Length = 1184 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +++ F +T + F L ++ G NG GKS+L AI Sbjct: 98 IVRMKLKDFVTYT-NVEYHFGSQLNMIIGPNGTGKSTLVCAI 138 >gi|327534650|gb|AEA93484.1| DNA repair protein RecN [Enterococcus faecalis OG1RF] Length = 628 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 31 DIEISHFR--GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ + FR G + ++ F L +++G GK+++ E I++ F + + K Sbjct: 2 NLFLKTFRLVGIEKNYEVNFIKGLNVISGPTSTGKTTIFELIDYAFGAKSHKSYIEVGTK 61 Query: 89 KRSIKTPMPMCMAVPRCKYQL 109 ++ + + R K L Sbjct: 62 CTDVELEFEIKNKLYRIKRTL 82 >gi|190889810|ref|YP_001976352.1| DNA replication and repair protein [Rhizobium etli CIAT 652] gi|226737822|sp|B3PXG8|RECF_RHIE6 RecName: Full=DNA replication and repair protein recF gi|190695089|gb|ACE89174.1| DNA replication and repair protein [Rhizobium etli CIAT 652] Length = 374 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + + ++ G NG GK++L EA+ L G RR +GD Sbjct: 5 VSLSRLKLTDFRNYAA-VSLALDGRHAVLTGNNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|170043308|ref|XP_001849335.1| structural maintenance of chromosomes protein 6 [Culex quinquefasciatus] gi|167866691|gb|EDS30074.1| structural maintenance of chromosomes protein 6 [Culex quinquefasciatus] Length = 1121 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I++ +F + +EF ++ G NG GKS++ A+ S+ Sbjct: 68 KILKIQLKNFMCHRNMV-VEFNKRANLLVGNNGSGKSAVLAALTIGLGCSASATNRSSSL 126 Query: 88 KKR 90 K+ Sbjct: 127 KQL 129 >gi|166365355|ref|YP_001657628.1| hypothetical protein MAE_26140 [Microcystis aeruginosa NIES-843] gi|166087728|dbj|BAG02436.1| hypothetical protein MAE_26140 [Microcystis aeruginosa NIES-843] Length = 394 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY--------GYT 78 K++ I+I ++R F + I ++ G NG GKS+L + +L Sbjct: 1 MKIVSIKIKNYRMF-KNIHIRDIPPFCVIIGANGTGKSTLFDIFGFLRDALKNNIRQALQ 59 Query: 79 QRRKHGDSIKKRSIKTPMPMCMAVP 103 R + + I + + + + + P Sbjct: 60 IRGGYREIITRGQEQEDIEIELQFP 84 >gi|145295309|ref|YP_001138130.1| DNA repair ATPase [Corynebacterium glutamicum R] gi|140845229|dbj|BAF54228.1| hypothetical protein [Corynebacterium glutamicum R] Length = 876 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 ++ +I I +FR ++ + D + +++G N GKSS+ EAI+ + Sbjct: 1 MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVL 49 >gi|82750940|ref|YP_416681.1| exonuclease [Staphylococcus aureus RF122] gi|82656471|emb|CAI80893.1| exonuclease [Staphylococcus aureus RF122] Length = 990 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|19552391|ref|NP_600393.1| DNA repair ATPase [Corynebacterium glutamicum ATCC 13032] gi|62390055|ref|YP_225457.1| DNA repair ATPase [Corynebacterium glutamicum ATCC 13032] gi|21323934|dbj|BAB98560.1| ATPase involved in DNA repair [Corynebacterium glutamicum ATCC 13032] gi|41325391|emb|CAF19871.1| ATPase involved in DNA repair [Corynebacterium glutamicum ATCC 13032] Length = 876 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 ++ +I I +FR ++ + D + +++G N GKSS+ EAI+ + Sbjct: 1 MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVL 49 >gi|169347061|ref|ZP_02866003.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169296744|gb|EDS78873.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 579 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K +EI +FR F E I D+ ++ G N GK++ AI +L ++ Sbjct: 1 MKFKSLEIKNFRNF-ECININL-DNKNVIFGMNDIGKTNFLYAIRFLLDKDVRKN 53 >gi|17232411|ref|NP_488959.1| hypothetical protein alr4919 [Nostoc sp. PCC 7120] gi|17134057|dbj|BAB76618.1| alr4919 [Nostoc sp. PCC 7120] Length = 662 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 13/81 (16%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 L++ + +F ++ Q I + ++ G NG GK++L ++I YG + Sbjct: 4 LELVLQNFGPYSGRQVINLDPRSEDNPHPIILLGGMNGGGKTTLMDSIRLALYGQRAQCS 63 Query: 82 -----KHGDSIKKRSIKTPMP 97 +GD + + P Sbjct: 64 TRGNLSYGDFLTQCVNSQANP 84 >gi|15240258|ref|NP_200954.1| MIM (hypersensitive to MMS, irradiation and MMC); ATP binding [Arabidopsis thaliana] gi|10177176|dbj|BAB10445.1| SMC-like protein [Arabidopsis thaliana] gi|332010088|gb|AED97471.1| protein MIM [Arabidopsis thaliana] Length = 1057 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L I++ +F + +Q IEF + + + GQNG GKS++ A+ F + + ++K Sbjct: 22 ILRIKVENFMCHSNLQ-IEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLK 80 Query: 89 K 89 Sbjct: 81 D 81 >gi|288869967|ref|ZP_06112422.2| hypothetical protein CLOSTHATH_00514 [Clostridium hathewayi DSM 13479] gi|288868972|gb|EFD01271.1| hypothetical protein CLOSTHATH_00514 [Clostridium hathewayi DSM 13479] Length = 484 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 RK KL I+I + G E E ++G+NG GK+S+ +AI + R Sbjct: 5 RKSSVKLTKIKIKNLFGIKE---YEADGQSVELSGRNGAGKTSVIDAIRLALTNRSDR 59 >gi|258566539|ref|XP_002584014.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907715|gb|EEP82116.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 978 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ +F E +E + + G+NG GKS++ A+ G S+K Sbjct: 83 IERVDCYNFMCH-EHLSMELGPLINFIVGKNGSGKSAVLTALTLCLGAKASTTNRGQSLK 141 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 IK + R K Q Sbjct: 142 -SFIKEGKETATIIVRIKNQ 160 >gi|168209004|ref|ZP_02634629.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170712884|gb|EDT25066.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] Length = 675 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 ++ I + +++ F + KI L + GQN GKS++ +A++ + +++ Sbjct: 1 MNIVGIRVKNYKSFLDSGKIPVDKKLFSLIGQNNTGKSAIMDAVQ-CVFPSSKKSV 55 >gi|170289340|ref|YP_001739578.1| phosphate ABC transporter, ATPase subunit [Thermotoga sp. RQ2] gi|222100286|ref|YP_002534854.1| Phosphate import ATP-binding protein pstB [Thermotoga neapolitana DSM 4359] gi|170176843|gb|ACB09895.1| phosphate ABC transporter, ATPase subunit [Thermotoga sp. RQ2] gi|221572676|gb|ACM23488.1| Phosphate import ATP-binding protein pstB [Thermotoga neapolitana DSM 4359] Length = 251 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 7/46 (15%) Query: 32 IEISHFRGFT-EIQKIE------FADHLTIVNGQNGYGKSSLSEAI 70 IEI +F + + ++ F + +T + G +G GK++L +I Sbjct: 5 IEIENFSAYYGDKVAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSI 50 >gi|33620623|ref|NP_891605.1| recombination endonuclease subunit [Enterobacteria phage RB49] gi|33438522|gb|AAL87829.2|AF410869_1 recombination endonuclease subunit [Enterobacteria phage RB49] Length = 560 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 13/66 (19%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +I++ F+ T++ G NG GKS++ EA+ ++ +G R + Sbjct: 23 EIQLDGFKK-------------TLITGVNGAGKSTMIEALCFVLFGKPFRSIKKGQLINS 69 Query: 91 SIKTPM 96 K + Sbjct: 70 VNKKKL 75 >gi|91775128|ref|YP_544884.1| DNA repair protein RecN [Methylobacillus flagellatus KT] gi|91709115|gb|ABE49043.1| DNA replication and repair protein RecN [Methylobacillus flagellatus KT] Length = 552 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I F + ++EF+ T++ G+ G GKS L +A+ + Sbjct: 2 LQTLSIRDF-VIVDKLELEFSPGFTVLTGETGAGKSILIDALSLVLG 47 >gi|78214193|ref|YP_382972.1| DNA repair protein RecN [Synechococcus sp. CC9605] gi|78198652|gb|ABB36417.1| DNA repair protein RecN [Synechococcus sp. CC9605] Length = 560 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +++ + E +++F+ T++ G+ G GKS L +A++ + G Sbjct: 2 LTGLQLQNI-ALIESLELDFSSGFTVLTGETGAGKSILLDALDAVLGG 48 >gi|49481863|gb|AAT66643.1| DNA repair and genetic recombination protein [Geobacillus stearothermophilus] Length = 573 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E + F LT++ G+ G GKS + +AI L G Sbjct: 2 LAELSIKNF-AIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGG 48 >gi|15615339|ref|NP_243642.1| DNA repair and genetic recombination [Bacillus halodurans C-125] gi|11134697|sp|Q9K974|RECN_BACHD RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|10175397|dbj|BAB06495.1| DNA repair and genetic recombination [Bacillus halodurans C-125] Length = 565 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+++ I F E + F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LVELSIKQF-AIIEQLTVSFDKGLTVLTGETGAGKSIIIDAIGLLLGG----RGSAEYVR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 YGEKRAEIE 65 >gi|331010187|gb|EGH90243.1| AAA ATPase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 589 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I I +FR + + D T + GQN GKS++ +AI + Sbjct: 4 LSKIHIKNFRS-CKQVILPLGD-FTPLVGQNNAGKSTILDAIRLVL 47 >gi|325270881|ref|ZP_08137468.1| recombination protein F [Prevotella multiformis DSM 16608] gi|324986678|gb|EGC18674.1| recombination protein F [Prevotella multiformis DSM 16608] Length = 368 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + L G+NG GK++L +A+ +L + + Sbjct: 1 MQLDKLSIINYKNIQAAT-LNLSARLNCFIGRNGEGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VIRHDSD 66 >gi|289166200|ref|YP_003456338.1| hypothetical protein LLO_2870 [Legionella longbeachae NSW150] gi|288859373|emb|CBJ13309.1| hypothetical protein LLO_2870 [Legionella longbeachae NSW150] Length = 874 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 L I I +F+ + + +++ + + ++ G N GKS+L A+ + + + D Sbjct: 1 MLLTSISIQNFQQYNKPFELKGLSAGINVIYGDNEAGKSTLLRALRAILFDRFNGKGAED 60 Query: 86 SI 87 + Sbjct: 61 FV 62 >gi|264680644|ref|YP_003280554.1| ATP-binding subunit [Comamonas testosteroni CNB-2] gi|262211160|gb|ACY35258.1| putative ATP-binding subunit [Comamonas testosteroni CNB-2] Length = 291 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I L D+ +S F+ + ++ A L + G NG GK+++ + I + Sbjct: 50 ILYLEDVHVSFDGFKAINGLN-LDIAPGELRCIIGPNGAGKTTMMDIITGKTRPDSGTVF 108 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQ 108 G +I K P M + R K+Q Sbjct: 109 FGSTIDLLRYKEPEIAAMGIGR-KFQ 133 >gi|258424802|ref|ZP_05687676.1| nuclease sbcCD subunit C [Staphylococcus aureus A9635] gi|257844966|gb|EEV69006.1| nuclease sbcCD subunit C [Staphylococcus aureus A9635] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|257486717|ref|ZP_05640758.1| hypothetical protein PsyrptA_25805 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 589 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L I I +FR + + D T + GQN GKS++ +AI + Sbjct: 4 LSKIHIKNFRS-CKQVILPLGD-FTPLVGQNNAGKSTILDAIRLVL 47 >gi|190360298|sp|Q2YXX0|SBCC_STAAB RecName: Full=Nuclease sbcCD subunit C Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|189466079|ref|ZP_03014864.1| hypothetical protein BACINT_02449 [Bacteroides intestinalis DSM 17393] gi|189434343|gb|EDV03328.1| hypothetical protein BACINT_02449 [Bacteroides intestinalis DSM 17393] Length = 1140 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I + + I+F + L ++ G+ G GK++L +AI Y T R Sbjct: 1 MKLQKLTIKNLASIEDAV-IDFENGPLSEESLFLICGETGAGKTTLLDAICLALYNETPR 59 Query: 81 RKHGDSIKKRSIKT 94 + ++ K R I Sbjct: 60 MERAENEKYRDIGQ 73 >gi|221070047|ref|ZP_03546152.1| urea ABC transporter, ATP-binding protein UrtD [Comamonas testosteroni KF-1] gi|220715070|gb|EED70438.1| urea ABC transporter, ATP-binding protein UrtD [Comamonas testosteroni KF-1] Length = 291 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I L D+ +S F+ + ++ A L + G NG GK+++ + I + Sbjct: 50 ILYLEDVHVSFDGFKAINGLN-LDIAPGELRCIIGPNGAGKTTMMDIITGKTRPDSGTVF 108 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQ 108 G +I K P M + R K+Q Sbjct: 109 FGSTIDLLRYKEPEIAAMGIGR-KFQ 133 >gi|90022400|ref|YP_528227.1| hypothetical protein Sde_2755 [Saccharophagus degradans 2-40] gi|89952000|gb|ABD82015.1| SMC protein-like protein [Saccharophagus degradans 2-40] Length = 370 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ I F+ +++++ D L ++ G NG GKS+ L +R Sbjct: 7 INNLTIQGFKSIKDLKQLRL-DSLNVLIGANGVGKSNFVSYFR-LLGEMLDKRLQ 59 >gi|49483538|ref|YP_040762.1| exonuclease [Staphylococcus aureus subsp. aureus MRSA252] gi|257425413|ref|ZP_05601838.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 55/2053] gi|257428073|ref|ZP_05604471.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 65-1322] gi|257430704|ref|ZP_05607086.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 68-397] gi|257433464|ref|ZP_05609822.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus E1410] gi|257436305|ref|ZP_05612352.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus M876] gi|282903927|ref|ZP_06311815.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus C160] gi|282905692|ref|ZP_06313547.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus Btn1260] gi|282908660|ref|ZP_06316481.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910929|ref|ZP_06318732.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus WBG10049] gi|282914136|ref|ZP_06321923.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus M899] gi|282924241|ref|ZP_06331915.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus C101] gi|283958111|ref|ZP_06375562.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus A017934/97] gi|293501164|ref|ZP_06667015.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 58-424] gi|293510125|ref|ZP_06668833.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus M809] gi|293526716|ref|ZP_06671401.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus M1015] gi|295427861|ref|ZP_06820493.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591178|ref|ZP_06949816.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus MN8] gi|81828026|sp|Q6GH60|SBCC_STAAR RecName: Full=Nuclease sbcCD subunit C gi|49241667|emb|CAG40355.1| putative exonuclease [Staphylococcus aureus subsp. aureus MRSA252] gi|257271870|gb|EEV04008.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 55/2053] gi|257274914|gb|EEV06401.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 65-1322] gi|257278832|gb|EEV09451.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 68-397] gi|257281557|gb|EEV11694.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus E1410] gi|257284587|gb|EEV14707.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus M876] gi|282313628|gb|EFB44021.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus C101] gi|282322204|gb|EFB52528.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus M899] gi|282325534|gb|EFB55843.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus WBG10049] gi|282327478|gb|EFB57770.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330984|gb|EFB60498.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus Btn1260] gi|282595545|gb|EFC00509.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus C160] gi|283790260|gb|EFC29077.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus A017934/97] gi|290920788|gb|EFD97851.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus M1015] gi|291096169|gb|EFE26430.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 58-424] gi|291467069|gb|EFF09587.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus M809] gi|295128219|gb|EFG57853.1| nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576064|gb|EFH94780.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus MN8] gi|312438253|gb|ADQ77324.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus TCH60] gi|315194264|gb|EFU24657.1| putative exonuclease [Staphylococcus aureus subsp. aureus CGS00] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|332020697|gb|EGI61102.1| Structural maintenance of chromosomes protein 6 [Acromyrmex echinatior] Length = 1222 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I + +F + +I +++ + GQNG GKS++ A+ G S+ Sbjct: 42 KVKKIRLHNFMCH-DALEITLNENVNFIVGQNGSGKSAILTALTVGLGARANVTSRGTSV 100 Query: 88 KK 89 K+ Sbjct: 101 KE 102 >gi|319638240|ref|ZP_07993003.1| ferrichrome transport ATP-binding protein FhuC [Neisseria mucosa C102] gi|317400513|gb|EFV81171.1| ferrichrome transport ATP-binding protein FhuC [Neisseria mucosa C102] Length = 241 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 YYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + R L ++ D + EI +++ +T++ G NG GKS+L A+ Sbjct: 5 FQIRNLSVRVQD------KTLLEIDQLDIPHGITVIIGPNGAGKSTLLRAL 49 >gi|302332963|gb|ADL23156.1| exonuclease subunit SbcC [Staphylococcus aureus subsp. aureus JKD6159] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|296119740|ref|ZP_06838294.1| ABC-type transport system, ATPase component [Corynebacterium ammoniagenes DSM 20306] gi|295966894|gb|EFG80165.1| ABC-type transport system, ATPase component [Corynebacterium ammoniagenes DSM 20306] Length = 269 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + F+ +T++ G NG GKS+ E++ ++G+S Sbjct: 22 KHINSRGGLRFSQPVTLIAGDNGSGKSTFLESVALNLGFSVIGGRYGNS 70 >gi|283470561|emb|CAQ49772.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ST398] Length = 1009 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|255020613|ref|ZP_05292676.1| DNA repair protein RecN [Acidithiobacillus caldus ATCC 51756] gi|254969998|gb|EET27497.1| DNA repair protein RecN [Acidithiobacillus caldus ATCC 51756] Length = 560 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L +EI +F E ++E A +T+V G+ G GKS + +AI + Sbjct: 2 LTRLEIRNF-ALIEALELELAPGMTVVTGETGAGKSIVVDAIAQILGDKASADL 54 >gi|256832789|ref|YP_003161516.1| hypothetical protein Jden_1565 [Jonesia denitrificans DSM 20603] gi|256686320|gb|ACV09213.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603] Length = 1151 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 23/40 (57%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 +++ ++ G+ + F T+++G +G GKS+L +A Sbjct: 23 ESMQLVNWGGYHGYHTVPFHPDGTLLSGASGSGKSTLLDA 62 >gi|166367523|ref|YP_001659796.1| DNA replication and repair protein [Microcystis aeruginosa NIES-843] gi|166089896|dbj|BAG04604.1| DNA replication and repair protein [Microcystis aeruginosa NIES-843] Length = 60 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE---WLFYGY 77 L + + +F+ + E +T + G N GKS+ EAI WL G Sbjct: 2 LTSLTLRNFKSYQEATLS--LAAITFLIGANASGKSNALEAIRLLSWLAKGS 51 >gi|152996480|ref|YP_001341315.1| SMC domain-containing protein [Marinomonas sp. MWYL1] gi|150837404|gb|ABR71380.1| SMC domain protein [Marinomonas sp. MWYL1] Length = 250 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 19/34 (55%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 IEF +TI G+NG GKS+L EAI + Sbjct: 38 IEFDKAVTIFVGENGSGKSTLLEAIAVSMGFNAE 71 >gi|310658644|ref|YP_003936365.1| factor for double strand breaks DNA repair and genetic recombination [Clostridium sticklandii DSM 519] gi|308825422|emb|CBH21460.1| factor for double strand breaks DNA repair and genetic recombination [Clostridium sticklandii] Length = 559 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F + KI F + I G+ G GKS + +A+ + +R I+ Sbjct: 2 LKELCIKDF-ALIDYSKINFFEGFNIFTGETGAGKSIVIDALLFALG----KRADKSFIR 56 Query: 89 KRSIKTPMP 97 K KT + Sbjct: 57 KNKSKTTIE 65 >gi|282916608|ref|ZP_06324366.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus D139] gi|283770414|ref|ZP_06343306.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus H19] gi|282319095|gb|EFB49447.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus D139] gi|283460561|gb|EFC07651.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus H19] Length = 1009 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|254498986|ref|ZP_05111687.1| multidrug transporter [Legionella drancourtii LLAP12] gi|254351791|gb|EET10625.1| multidrug transporter [Legionella drancourtii LLAP12] Length = 1203 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +D + + G G GK+++ +AI YG T R Sbjct: 8 SDGIFAIIGPTGSGKTTILDAICLALYGRTPR 39 >gi|238694914|ref|YP_002922108.1| recombination endonuclease subunit [Enterobacteria phage JSE] gi|220029050|gb|ACL77985.1| recombination endonuclease subunit [Enterobacteria phage JSE] Length = 560 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 13/66 (19%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +I++ F+ T++ G NG GKS++ EA+ ++ +G R + Sbjct: 23 EIQLDGFKK-------------TLITGVNGAGKSTMIEALCFVLFGKPFRSIKKGQLINS 69 Query: 91 SIKTPM 96 K + Sbjct: 70 VNKKKL 75 >gi|296139509|ref|YP_003646752.1| ATPase AAA [Tsukamurella paurometabola DSM 20162] gi|296027643|gb|ADG78413.1| AAA ATPase [Tsukamurella paurometabola DSM 20162] Length = 279 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 R + I+ LT V G+NG GKS+L EA+ +G R Sbjct: 27 RPLFDGAAIDLTAPLTFVVGENGSGKSTLVEAVA-EQFGLDARGGRAS 73 >gi|197264514|ref|ZP_03164588.1| DNA sulfur modification protein DndD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242769|gb|EDY25389.1| DNA sulfur modification protein DndD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 669 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFCGTHTIDLAPRKRPHEVNPRPIVLFGGLNGAGKTSILSAIRLALYG 60 Query: 77 YTQRRKHGDSIKKRSI 92 R G +++++ Sbjct: 61 ---RLAFGPAMQQQEY 73 >gi|15920330|ref|NP_375999.1| hypothetical protein ST0153 [Sulfolobus tokodaii str. 7] gi|15621112|dbj|BAB65108.1| 339aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 339 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +IEI +FRG + K+E + I+ G+N GKS++ EAI ++ Sbjct: 2 INEIEIQNFRGI-KYCKLESLSQINILIGRNNSGKSTILEAIYFI 45 >gi|117924329|ref|YP_864946.1| ABC transporter ATPase [Magnetococcus sp. MC-1] gi|117608085|gb|ABK43540.1| ABC transporter related protein [Magnetococcus sp. MC-1] Length = 255 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLF 74 TS+ LI L + +S F GF + + F L + G NG GK+++ + + Sbjct: 6 TSHRPDNLILYLDAVSVS-FDGFKALNALSFYVGRGELRAIIGPNGAGKTTMMDVVTGKT 64 Query: 75 YGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 GD + + + + R K+Q Sbjct: 65 RPDVGSVVFGDRVDLTKLDEAEIANLGIGR-KFQ 97 >gi|326569861|gb|EGE19911.1| hypothetical protein E9U_06096 [Moraxella catarrhalis BC8] Length = 458 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 +++ FR ++ + I+ D +T+V G NG GKS+LS+ + W++ T + D ++ Sbjct: 8 LKVEDFRAISQAE-IKL-DGITVVAGVNGCGKSTLSKLLYWVYRSATDFKVLADIQFRKD 65 Query: 92 IKTPMPMCM 100 ++ + M Sbjct: 66 LEVVNKLVM 74 >gi|323359377|ref|YP_004225773.1| ATPase [Microbacterium testaceum StLB037] gi|323275748|dbj|BAJ75893.1| predicted ATPase [Microbacterium testaceum StLB037] Length = 253 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ F EF +T + G+NG GKS+L E I Sbjct: 37 VAQFLEVAADDGWEFGPGVTFLVGENGSGKSTLIEGI 73 >gi|322420367|ref|YP_004199590.1| hypothetical protein GM18_2870 [Geobacter sp. M18] gi|320126754|gb|ADW14314.1| hypothetical protein GM18_2870 [Geobacter sp. M18] Length = 656 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 KL+ + + ++R + ++ + +LT + G+N GK++L A+ Sbjct: 1 MKLIKVRVQNYRSVEDSEEFDIG-NLTCLVGKNEAGKTALLSALR 44 >gi|300933602|ref|ZP_07148858.1| hypothetical protein CresD4_05987 [Corynebacterium resistens DSM 45100] Length = 1011 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ +EI +F G E KIE +T+V+G N GKS+ EA + L +R Sbjct: 26 LQIYRLEIWNFAG-VEHAKIEPQIPGVTVVHGPNESGKSTFVEAFQLLLNPNYRRDTQAK 84 Query: 86 SIKKRSIKTP 95 + K K Sbjct: 85 DVTKYKSKGK 94 >gi|296282365|ref|ZP_06860363.1| recombination protein F [Citromicrobium bathyomarinum JL354] Length = 361 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L I I FR +E ++ G NG GK+++ EA+ L G RR Sbjct: 1 MALDRISILDFRNHR-QTALEDTARFNLLVGANGAGKTNVLEALSLLAPGRGLRRAKLPE 59 Query: 87 IKK 89 + + Sbjct: 60 MAR 62 >gi|294675560|ref|YP_003576175.1| DNA replication and repair protein RecF [Rhodobacter capsulatus SB 1003] gi|294474380|gb|ADE83768.1| DNA replication and repair protein RecF [Rhodobacter capsulatus SB 1003] Length = 352 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D+ + FR + + G NG GK+S+ EA+ L G RR + + Sbjct: 2 LRDLTLLQFRSHR-RAVLALDARPVALYGPNGAGKTSVLEAVSLLSPGRGLRRASAEELI 60 Query: 89 KRSIK 93 +R + Sbjct: 61 RRQEQ 65 >gi|256027930|ref|ZP_05441764.1| SMC domain-containing protein [Fusobacterium sp. D11] gi|289765877|ref|ZP_06525255.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289717432|gb|EFD81444.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 325 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLF-YGYTQRRKHG 84 F + IEI +FR F + I F ++ G N GK++L AI+ +F Y + Sbjct: 4 FYIKKIEIKNFRNF---ENISFQTREKNVIIGMNDVGKTNLLYAIKLVFSYKFRNIDLLD 60 Query: 85 DSIKKRSIKTPMPMCMAV 102 K++I P + +++ Sbjct: 61 SDFHKQNISKPFEIFISM 78 >gi|254567115|ref|XP_002490668.1| Structural maintenance of chromosomes protein [Pichia pastoris GS115] gi|238030464|emb|CAY68388.1| Structural maintenance of chromosomes protein [Pichia pastoris GS115] gi|328351054|emb|CCA37454.1| hypothetical protein PP7435_Chr1-1336 [Pichia pastoris CBS 7435] Length = 1076 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + + ++ ++ + G NG GKS++ A+ G + K Sbjct: 52 ITKVTMINFMAY-DNFEVLLGPQISFITGNNGQGKSTILSALTVGLGARAGETDRGSNFK 110 >gi|296123575|ref|YP_003631353.1| hypothetical protein Plim_3341 [Planctomyces limnophilus DSM 3776] gi|296015915|gb|ADG69154.1| conserved hypothetical protein [Planctomyces limnophilus DSM 3776] Length = 1047 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ +I I F + + + + LT+ G NG GK++L + + YG+T Sbjct: 1 MKISNIHIDRFGVWEDFDQTIKPNGLTVFYGTNGTGKTTLLRFLRSMLYGFTI 53 >gi|119475238|ref|ZP_01615591.1| recombination protein F [marine gamma proteobacterium HTCC2143] gi|119451441|gb|EAW32674.1| recombination protein F [marine gamma proteobacterium HTCC2143] Length = 366 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + + +EI+ R T + + I+ G NG GK+S+ EAI L + + G Sbjct: 1 MVLIRRLEIAGVRNLTS-VSLPLLSTINILYGDNGAGKTSVLEAIHLL---SSAKSFRGH 56 Query: 86 SIK 88 +K Sbjct: 57 KLK 59 >gi|256848553|ref|ZP_05553994.1| exonuclease SbcC [Lactobacillus coleohominis 101-4-CHN] gi|256714605|gb|EEU29585.1| exonuclease SbcC [Lactobacillus coleohominis 101-4-CHN] Length = 1040 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + L + + +F + + I+F + +V+G G GK+++ +A+ + +G T + Sbjct: 1 MQPLKLHLQYFGPYKDEV-IDFQKLTGTAVFLVSGNTGSGKTTIFDAMCYALFGQTTNDQ 59 Query: 83 HGDSIKKRSIKTPM 96 D+ RS P Sbjct: 60 DRDATALRSDFAPK 73 >gi|312110526|ref|YP_003988842.1| SMC domain protein [Geobacillus sp. Y4.1MC1] gi|311215627|gb|ADP74231.1| SMC domain protein [Geobacillus sp. Y4.1MC1] Length = 475 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K++ +E+ HF+ T EF + G N GK+S+ +AI + YG T Sbjct: 1 MKIISLELRHFKNHT-QAFFEFKE-TNHFFGDNFTGKTSIGDAIVFALYGVT 50 >gi|256826169|ref|YP_003150129.1| hypothetical protein Ksed_23970 [Kytococcus sedentarius DSM 20547] gi|256689562|gb|ACV07364.1| hypothetical protein Ksed_23970 [Kytococcus sedentarius DSM 20547] Length = 874 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ +E+ FRG + ++E + + +V G N GKS+L A++ L +K Sbjct: 1 MRIHALEVKDFRGI-DHYRLEVPEAGVLVVEGPNEAGKSTLVRALDMLLTEKATAKKQ 57 >gi|254417660|ref|ZP_05031393.1| hypothetical protein MC7420_649 [Microcoleus chthonoplastes PCC 7420] gi|196175552|gb|EDX70583.1| hypothetical protein MC7420_649 [Microcoleus chthonoplastes PCC 7420] Length = 356 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +IEI++FR F E KI + ++ GQN GK++L EA+ Sbjct: 2 LKNIEITNFRCF-EATKISGFKRVNLIGGQNNAGKTALLEAV 42 >gi|148284348|ref|YP_001248438.1| recombination protein F [Orientia tsutsugamushi str. Boryong] gi|146739787|emb|CAM79662.1| DNA replication and repair protein [Orientia tsutsugamushi str. Boryong] Length = 383 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 I ++ + + ++R TE+ D + ++ G+NG GK++L E+I G R Sbjct: 12 ICRITKLVLHNYRNLTELTVSPKCDKI-LIIGKNGSGKTNLLESISLFAPGRGLRGAKYS 70 Query: 86 SIKKR 90 I ++ Sbjct: 71 DILRK 75 >gi|110680118|ref|YP_683125.1| molybdate ABC transporter, ATP-binding protein [Roseobacter denitrificans OCh 114] gi|109456234|gb|ABG32439.1| molybdate ABC transporter, ATP-binding protein [Roseobacter denitrificans OCh 114] Length = 365 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F GF E + +T++ G++G GK+++ A+ L Sbjct: 10 GFAGFDLDASFEAPNGITMLYGRSGSGKTTIVNALAGLL 48 >gi|322389037|ref|ZP_08062605.1| DNA repair protein RecN [Streptococcus parasanguinis ATCC 903] gi|321144260|gb|EFX39670.1| DNA repair protein RecN [Streptococcus parasanguinis ATCC 903] Length = 552 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|315224518|ref|ZP_07866345.1| ATPase [Capnocytophaga ochracea F0287] gi|314945539|gb|EFS97561.1| ATPase [Capnocytophaga ochracea F0287] Length = 240 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 Y R L + + F TE + I +T + G NG GKSSL EAI + Sbjct: 2 YIRSL--NITTDRVQGFPYNTEAVRYAKHINLDQPVTFIVGDNGVGKSSLIEAIAYKLR 58 >gi|312864596|ref|ZP_07724827.1| DNA repair protein RecN [Streptococcus downei F0415] gi|311099723|gb|EFQ57936.1| DNA repair protein RecN [Streptococcus downei F0415] Length = 551 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|312867169|ref|ZP_07727379.1| DNA repair protein RecN [Streptococcus parasanguinis F0405] gi|311097298|gb|EFQ55532.1| DNA repair protein RecN [Streptococcus parasanguinis F0405] Length = 552 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|296876931|ref|ZP_06900976.1| DNA repair protein RecN [Streptococcus parasanguinis ATCC 15912] gi|296432062|gb|EFH17864.1| DNA repair protein RecN [Streptococcus parasanguinis ATCC 15912] Length = 552 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|295697511|ref|YP_003590749.1| hypothetical protein Btus_2978 [Bacillus tusciae DSM 2912] gi|295413113|gb|ADG07605.1| conserved hypothetical protein [Bacillus tusciae DSM 2912] Length = 830 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 29 LLDIEISHFRGFTEIQK---IEF-ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L ++I FRG + F + + V NG GKSS+ EA+ + G R Sbjct: 6 LSRVKIEGFRGINNESNPLDVRFRTNAVNSVFAANGVGKSSIFEALSYAIRGKVPR 61 >gi|218440059|ref|YP_002378388.1| DNA repair protein RecN [Cyanothece sp. PCC 7424] gi|218172787|gb|ACK71520.1| DNA repair protein RecN [Cyanothece sp. PCC 7424] Length = 586 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I +F + ++EF L ++ G+ G GKS + +AI+ + G R Sbjct: 2 LSVLRIQNF-TLIDQLELEFGTKLNVLTGETGAGKSIILDAIDVVLGGKANYRL 54 >gi|114798067|ref|YP_759290.1| DNA replication and repair protein RecF [Hyphomonas neptunium ATCC 15444] gi|114738241|gb|ABI76366.1| DNA replication and repair protein RecF [Hyphomonas neptunium ATCC 15444] Length = 370 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + ++ FR + + + + G NG GK++L EA+ G R + Sbjct: 4 LTRLSLTDFRNYAGLT-LRLDARPVCLYGSNGAGKTNLLEAVSQFGPGRGLRSAQLSEMT 62 Query: 89 KR 90 +R Sbjct: 63 RR 64 >gi|67458427|ref|YP_246051.1| recombination protein F [Rickettsia felis URRWXCal2] gi|67003960|gb|AAY60886.1| DNA replication and repair protein RecF [Rickettsia felis URRWXCal2] Length = 420 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 S ++ ++ K IF L + + ++R F ++ ++ + I+ G+NG GK+++ EAI Sbjct: 48 SLTIILFHKMKNIF-LHSLTLENYRNFKNLE-LKTDNTPIILIGENGSGKTNILEAISLF 105 Query: 74 FYGYTQRRKHGDSIKKRSIKT 94 + G R I K S Sbjct: 106 YPGRGLRSAKLADICKASEDQ 126 >gi|20090716|ref|NP_616791.1| hypothetical protein MA1866 [Methanosarcina acetivorans C2A] gi|19915770|gb|AAM05271.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 613 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKH 83 + + +FR EI +E L ++ G N GK+S+ +++ G R + Sbjct: 1 MHVKNFRCIKEIN-LELNSGLNVIIGANNSGKTSILDSLRLALGIGSYSRSIY 52 >gi|89092266|ref|ZP_01165220.1| DNA replication and repair protein RecF [Oceanospirillum sp. MED92] gi|89083354|gb|EAR62572.1| DNA replication and repair protein RecF [Oceanospirillum sp. MED92] Length = 363 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 + +++I + R + I FA + I+ G+NG GK+S+ EAI Sbjct: 1 MSISNLQIKNLRNISS---ISFAPSSAINIICGENGSGKTSILEAI 43 >gi|327538827|gb|EGF25473.1| SMC domain protein [Rhodopirellula baltica WH47] Length = 387 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I I+ +R + + + LT+V G NG GK++L ++ Sbjct: 2 IHRIAIAGYRSIRSLT-VRLGE-LTVVTGPNGSGKTNLYRSLR 42 >gi|294661473|ref|YP_003579926.1| gp46 recombination endonuclease subunit [Klebsiella phage KP15] gi|292660634|gb|ADE34882.1| gp46 recombination endonuclease subunit [Klebsiella phage KP15] Length = 565 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 T++ G+NG GKS++ EA+ + +G + R Sbjct: 31 TLITGKNGGGKSTMIEALTYALFGKSFRDLK 61 >gi|291529305|emb|CBK94891.1| DNA replication and repair protein RecN [Eubacterium rectale M104/1] Length = 558 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + + + ++EF+D L I++G+ G GKS + +I Q+ D+ K Sbjct: 2 LQNLHVKNL-ALIDECEVEFSDGLNILSGETGAGKSIIIGSINLALGEKVQKEMLRDNEK 60 >gi|291525236|emb|CBK90823.1| DNA replication and repair protein RecN [Eubacterium rectale DSM 17629] Length = 558 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + + + ++EF+D L I++G+ G GKS + +I Q+ D+ K Sbjct: 2 LQNLHVKNL-ALIDECEVEFSDGLNILSGETGAGKSIIIGSINLALGEKVQKEMLRDNEK 60 >gi|288800632|ref|ZP_06406090.1| hypothetical protein HMPREF0669_01030 [Prevotella sp. oral taxon 299 str. F0039] gi|288332845|gb|EFC71325.1| hypothetical protein HMPREF0669_01030 [Prevotella sp. oral taxon 299 str. F0039] Length = 626 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +IEI F+ F +E +L ++ G+NG GKSS+ A+ L Sbjct: 4 IKEIEIEGFKAFPNKFNLELGKNL-LMYGENGSGKSSIYYALHALL 48 >gi|254585009|ref|XP_002498072.1| ZYRO0G01584p [Zygosaccharomyces rouxii] gi|238940966|emb|CAR29139.1| ZYRO0G01584p [Zygosaccharomyces rouxii] Length = 1088 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ---RRKHGD 85 ++ + + +F +T + + + + L ++ G NG GKS+ A+ G + R K + Sbjct: 36 IVKMRLENFVTYT-LTEFDLSPSLNMIIGPNGSGKSTFVCAVCLGLAGKPEFIKRSKRVE 94 Query: 86 SIKKRSIK 93 K Sbjct: 95 DFIKNGED 102 >gi|238924563|ref|YP_002938079.1| DNA repair ATPase [Eubacterium rectale ATCC 33656] gi|238876238|gb|ACR75945.1| DNA repair ATPase [Eubacterium rectale ATCC 33656] Length = 558 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ + + + ++EF+D L I++G+ G GKS + +I Q+ D+ K Sbjct: 2 LQNLHVKNL-ALIDECEVEFSDGLNILSGETGAGKSIIIGSINLALGEKVQKEMLRDNEK 60 >gi|227519449|ref|ZP_03949498.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis TX0104] gi|227073061|gb|EEI11024.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis TX0104] Length = 452 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 8/52 (15%) Query: 26 IFKLLDIEISHFRGFT-------EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + K +++ +FR + E + + F +T + G NG GKS+L +AI Sbjct: 235 VVKQPMLQLKNFRLYQGKRVLLEEKEALLFK-GITTLTGPNGAGKSTLLKAI 285 >gi|256375045|ref|YP_003098705.1| ATPase AAA [Actinosynnema mirum DSM 43827] gi|255919348|gb|ACU34859.1| AAA ATPase [Actinosynnema mirum DSM 43827] Length = 247 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 18/28 (64%) Query: 43 IQKIEFADHLTIVNGQNGYGKSSLSEAI 70 Q +EF +T + G NG GKS+L EAI Sbjct: 32 EQGLEFTHPVTFLVGDNGSGKSTLVEAI 59 >gi|293333792|ref|NP_001169562.1| hypothetical protein LOC100383441 [Zea mays] gi|224030099|gb|ACN34125.1| unknown [Zea mays] Length = 1040 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + S+K Sbjct: 6 ISRIRLENFMCHSSLH-IELDKHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRAASLK 64 Query: 89 K 89 Sbjct: 65 D 65 >gi|215741288|dbj|BAG97783.1| unnamed protein product [Oryza sativa Japonica Group] Length = 119 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + ++K Sbjct: 5 ISRIRLENFMCHSSLH-IELGQHVNFITGQNGSGKSAVLTALCIAFGSRAKSTQRAAALK 63 Query: 89 K 89 Sbjct: 64 D 64 >gi|149909153|ref|ZP_01897811.1| putative ATP-dependent dsDNA exonuclease [Moritella sp. PE36] gi|149807904|gb|EDM67849.1| putative ATP-dependent dsDNA exonuclease [Moritella sp. PE36] Length = 1223 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + + ++ F ++ L + G G GK+++ +AI Y T R Sbjct: 1 MKIKRLSFKNINSLKGEWQLNFDQEPFLSNGLFAITGPTGAGKTTILDAICLALYHETPR 60 >gi|323464394|gb|ADX76547.1| DNA repair protein RecN [Staphylococcus pseudintermedius ED99] Length = 560 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQSLSIKQF-AIIDTLDIQFSDGLTVLSGETGAGKSIIIDAI 42 >gi|319892504|ref|YP_004149379.1| DNA repair protein RecN [Staphylococcus pseudintermedius HKU10-03] gi|317162200|gb|ADV05743.1| DNA repair protein RecN [Staphylococcus pseudintermedius HKU10-03] Length = 560 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + I+F+D LT+++G+ G GKS + +AI Sbjct: 2 LQSLSIKQF-AIIDTLDIQFSDGLTVLSGETGAGKSIIIDAI 42 >gi|291569106|dbj|BAI91378.1| DNA repair protein RecN [Arthrospira platensis NIES-39] Length = 592 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I +F + +E L + G+ G GKS + +A++ + G RR Sbjct: 2 LISLRIENF-ALIDHLDLELGPGLNVFTGETGAGKSIILDAVDAVLGGKVDRR 53 >gi|284051026|ref|ZP_06381236.1| DNA repair protein RecN [Arthrospira platensis str. Paraca] Length = 622 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ + I +F + +E L + G+ G GKS + +A++ + G RR Sbjct: 32 LISLRIENF-ALIDHLDLELGPGLNVFTGETGAGKSIILDAVDAVLGGKVDRR 83 >gi|237736478|ref|ZP_04566959.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229421520|gb|EEO36567.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 232 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 13/53 (24%) Query: 15 KSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 K+LT Y +K +FK LD+EI + D +T++ G++G GK++L Sbjct: 8 KNLTKIYEKKEVFKNLDLEIKN-------------DEITVILGKSGCGKTTLM 47 >gi|256005439|ref|ZP_05430402.1| DNA repair protein RecN [Clostridium thermocellum DSM 2360] gi|281417534|ref|ZP_06248554.1| DNA repair protein RecN [Clostridium thermocellum JW20] gi|255990579|gb|EEU00698.1| DNA repair protein RecN [Clostridium thermocellum DSM 2360] gi|281408936|gb|EFB39194.1| DNA repair protein RecN [Clostridium thermocellum JW20] gi|316940435|gb|ADU74469.1| DNA repair protein RecN [Clostridium thermocellum DSM 1313] Length = 570 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI + + +IE D L ++ G+ G GKS + ++I + +R + D I+ Sbjct: 2 LQRLEIQNV-AIIDKVEIELGDGLNVLTGETGAGKSIIIDSINAILG----QRLYKDLIR 56 >gi|160938798|ref|ZP_02086149.1| hypothetical protein CLOBOL_03692 [Clostridium bolteae ATCC BAA-613] gi|158437761|gb|EDP15521.1| hypothetical protein CLOBOL_03692 [Clostridium bolteae ATCC BAA-613] Length = 1130 Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + + + F D + G +G GKS++ +A++ + Y T R Sbjct: 13 LSRICLNNWH-YITKRTLSFNDEINFFTGHSGSGKSTVIDAMQIVLYANTDGRG 65 >gi|311032179|ref|ZP_07710269.1| ferrichrome import ABC transporter, ATP-binding protein FhuC [Bacillus sp. m3-13] Length = 281 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 13/65 (20%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +K L Y +LI K L IEI +T + G NG GKS+L +AI + Sbjct: 6 TKDLNIGYGERLIIKDLSIEIP-------------DKQITTIIGSNGCGKSTLLKAITRI 52 Query: 74 FYGYT 78 + Sbjct: 53 ISHQS 57 >gi|307129652|ref|YP_003881668.1| recombination and repair protein [Dickeya dadantii 3937] gi|306527181|gb|ADM97111.1| recombination and repair protein [Dickeya dadantii 3937] Length = 553 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQAGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|302338050|ref|YP_003803256.1| DNA repair protein RecN [Spirochaeta smaragdinae DSM 11293] gi|301635235|gb|ADK80662.1| DNA repair protein RecN [Spirochaeta smaragdinae DSM 11293] Length = 562 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%) Query: 32 IEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +E RG+ + ++F++HLT+++G+ G GKS L A+ L G + +SI+ Sbjct: 2 LETLTIRGYALIDSANLDFSEHLTVLSGETGAGKSILIGALSLLLGG----KGDTESIRI 57 Query: 90 RSIKTPMPMCMAVPRC 105 S + + + V C Sbjct: 58 GSEEAEITAMVRVDSC 73 >gi|251790874|ref|YP_003005595.1| recombination and repair protein [Dickeya zeae Ech1591] gi|247539495|gb|ACT08116.1| DNA repair protein RecN [Dickeya zeae Ech1591] Length = 553 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + IS+F E++ I+F ++++ G+ G GKS +A+ + Sbjct: 2 LAQLTISNFAIVRELE-IDFQAGMSVITGETGAGKSIAIDALGLCLGNRSDASM 54 >gi|229918306|ref|YP_002886952.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] gi|229469735|gb|ACQ71507.1| DNA sulfur modification protein DndD [Exiguobacterium sp. AT1b] Length = 670 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-----HLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 K+ I + + + + Q +F + ++ ++ G+NG GK++ A+ YG Sbjct: 1 MKIESIVLKNIGAY-KNQTFDFKNENSNKNVILIGGKNGAGKTTFLNALRTGLYGSQA 57 >gi|225164247|ref|ZP_03726520.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224801152|gb|EEG19475.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 504 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 19/39 (48%) Query: 31 DIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 I +++F F L I+ G NG GKS+L EA Sbjct: 88 QIHLTNFLSFGPDAPPIPLRSLNIIIGPNGSGKSNLIEA 126 >gi|154498372|ref|ZP_02036750.1| hypothetical protein BACCAP_02361 [Bacteroides capillosus ATCC 29799] gi|150272683|gb|EDM99861.1| hypothetical protein BACCAP_02361 [Bacteroides capillosus ATCC 29799] Length = 256 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 20/30 (66%) Query: 41 TEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++++EF +T G+NG GKS+L EAI Sbjct: 33 ARLKRLEFRRPVTFFVGENGSGKSTLLEAI 62 >gi|111026981|ref|YP_708959.1| hypothetical protein RHA1_ro11154 [Rhodococcus jostii RHA1] gi|110825520|gb|ABH00801.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 488 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 L IEIS FRG ++ ++ +T ++G NG GKS++++ Sbjct: 27 LQSIEISGFRGIQHLE-LDLKSPITAISGLNGTGKSTIAQ 65 >gi|94311762|ref|YP_584972.1| hypothetical protein Rmet_2830 [Cupriavidus metallidurans CH34] gi|93355614|gb|ABF09703.1| hypothetical protein Rmet_2830 [Cupriavidus metallidurans CH34] Length = 676 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 29 LLDIEISHFRGFTEIQK-----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++I ++ + +++ I+ A LT+V G NG GKS+L + + G Sbjct: 7 IESLQIRNYGLYPGLERNGVFDIDLAPGLTVVLGANGLGKSTLVNILFRMLTG 59 >gi|300856103|ref|YP_003781087.1| putative ATP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436218|gb|ADK15985.1| predicted ATP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 249 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 27 FKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 +L +I F + + ++F +T + G+NG GKS++ EAI + G+ Sbjct: 13 IELRRDKIKSFSTYPFCLPVIKNLSSLKFHPKVTFIVGENGTGKSTILEAIA-VLSGFNA 71 Query: 80 RRKHGD 85 + Sbjct: 72 EGGTKN 77 >gi|298694647|gb|ADI97869.1| exonuclease [Staphylococcus aureus subsp. aureus ED133] Length = 1009 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|297625141|ref|YP_003706575.1| DNA repair protein RecN [Truepera radiovictrix DSM 17093] gi|297166321|gb|ADI16032.1| DNA repair protein RecN [Truepera radiovictrix DSM 17093] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L+ +E+ F + ++EFA L ++ G+ G GKS L +A+ L G Sbjct: 2 LVALELRDF-AIIDALRLEFAPGLNVLTGETGAGKSILVDALALLIGG 48 >gi|227540038|ref|ZP_03970087.1| ABC superfamily ATP binding cassette transporter, ABC protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240113|gb|EEI90128.1| ABC superfamily ATP binding cassette transporter, ABC protein [Sphingobacterium spiritivorum ATCC 33300] Length = 241 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 17/27 (62%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAI 70 +K F +T + G+NG GKS+ E+I Sbjct: 30 EKFRFRQPVTFIVGENGSGKSTFIESI 56 >gi|152982918|ref|YP_001352697.1| hypothetical protein mma_1007 [Janthinobacterium sp. Marseille] gi|151282995|gb|ABR91405.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 936 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRKHG 84 +F L IE+ + + + + + V G NG GK++L +A+ L + R + Sbjct: 1 MFHLQSIELLQW-DYCQRLTLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLDCSGGRSYK 59 Query: 85 DSIKKRSIKT 94 + + T Sbjct: 60 TYARHANSDT 69 >gi|125973332|ref|YP_001037242.1| DNA repair protein RecN [Clostridium thermocellum ATCC 27405] gi|125713557|gb|ABN52049.1| DNA replication and repair protein RecN [Clostridium thermocellum ATCC 27405] Length = 570 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L +EI + + +IE D L ++ G+ G GKS + ++I + +R + D I+ Sbjct: 2 LQRLEIQNV-AIIDKVEIELGDGLNVLTGETGAGKSIIIDSINAILG----QRLYKDLIR 56 >gi|317121622|ref|YP_004101625.1| hypothetical protein Tmar_0783 [Thermaerobacter marianensis DSM 12885] gi|315591602|gb|ADU50898.1| hypothetical protein Tmar_0783 [Thermaerobacter marianensis DSM 12885] Length = 1188 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + F F F + L+ N GKS+L + + +G Sbjct: 46 HRLVLRGFGPFQGTVAFRFPEGLSHWVAPNETGKSTLVAGLVAVLFG 92 >gi|303249848|ref|ZP_07336052.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251672|ref|ZP_07533577.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651415|gb|EFL81567.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860869|gb|EFM92877.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 523 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQKIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|219117049|ref|XP_002179319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409210|gb|EEC49142.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1335 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 12/97 (12%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQN--------GYGKSSLSEA 69 S K +L + + F F + L ++ G N G GKSSL+ + Sbjct: 615 SMSGNKTDVELYSLTVEGFGPFRQPVTYPLLERGLVLLRGSNKDGGSDSNGSGKSSLAMS 674 Query: 70 IEWLFYGYTQRR-KHGDSIKKRSIKTPMPMCMAVPRC 105 W F G R + + + +PRC Sbjct: 675 ALWAFTGSIDPRPLQDSKVSDVVHDSCK--VIGLPRC 709 >gi|149186139|ref|ZP_01864453.1| recombinational DNA repair ATPase [Erythrobacter sp. SD-21] gi|148830170|gb|EDL48607.1| recombinational DNA repair ATPase [Erythrobacter sp. SD-21] Length = 359 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I ++ FR E ++ ++ G+NG GK+++ EA+ L G RR + I Sbjct: 2 LDRISLTRFRNH-EATELGATARFNLLVGENGAGKTNVLEALSLLAPGRGLRRANLADIV 60 Query: 89 KRSIK 93 + + Sbjct: 61 QHGVD 65 >gi|148651962|ref|YP_001279055.1| DNA repair protein RecN [Psychrobacter sp. PRwf-1] gi|148571046|gb|ABQ93105.1| DNA repair protein RecN [Psychrobacter sp. PRwf-1] Length = 603 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + +F ++ D ++ G+ G GKS L +A+ G Sbjct: 2 LTSLTLQNF-ALINHHELSLYDGFNVITGETGAGKSLLLDALSLCIGG 48 >gi|88603016|ref|YP_503194.1| hypothetical protein Mhun_1754 [Methanospirillum hungatei JF-1] gi|88188478|gb|ABD41475.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 405 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 10/80 (12%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL---------FYGYT 78 ++ +E+ ++R ++ + LTI G NG GKS++ + +L Sbjct: 11 QIEKLEVKNYRVLRHLELSKLTP-LTIFIGPNGSGKSTIFDVFAFLSECFTQPGGLRTAW 69 Query: 79 QRRKHGDSIKKRSIKTPMPM 98 ++R ++ R P+ + Sbjct: 70 EKRGRFKHLRSRGSTDPISI 89 >gi|325922761|ref|ZP_08184495.1| DNA replication and repair protein RecF [Xanthomonas gardneri ATCC 19865] gi|325546757|gb|EGD17877.1| DNA replication and repair protein RecF [Xanthomonas gardneri ATCC 19865] Length = 368 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + I R F ++ A L ++ G NG GK+S+ EA+ + YG + R + D Sbjct: 1 MHVVRLSIHRLRRFQTVELYP-ASSLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDG 59 Query: 87 IKKRSIK 93 + ++ Sbjct: 60 LIQQGAD 66 >gi|325977775|ref|YP_004287491.1| DNA repair protein recN [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177703|emb|CBZ47747.1| DNA repair protein recN [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|320546354|ref|ZP_08040671.1| DNA repair protein RecN [Streptococcus equinus ATCC 9812] gi|320449008|gb|EFW89734.1| DNA repair protein RecN [Streptococcus equinus ATCC 9812] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|306830875|ref|ZP_07464037.1| DNA repair protein RecN [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426898|gb|EFM30008.1| DNA repair protein RecN [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|306833006|ref|ZP_07466138.1| DNA repair protein RecN [Streptococcus bovis ATCC 700338] gi|304424905|gb|EFM28039.1| DNA repair protein RecN [Streptococcus bovis ATCC 700338] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|288904843|ref|YP_003430065.1| DNA repair and genetic recombination protein RecN [Streptococcus gallolyticus UCN34] gi|288731569|emb|CBI13124.1| DNA repair and genetic recombination protein RecN [Streptococcus gallolyticus UCN34] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|241760496|ref|ZP_04758589.1| ferrichrome transport ATP-binding protein FhuC [Neisseria flavescens SK114] gi|241319000|gb|EER55502.1| ferrichrome transport ATP-binding protein FhuC [Neisseria flavescens SK114] Length = 241 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + EI +++ +T++ G NG GKS+L A+ Sbjct: 17 KTLLEIDQLDIPSGMTVIIGPNGAGKSTLLRAL 49 >gi|225076190|ref|ZP_03719389.1| hypothetical protein NEIFLAOT_01225 [Neisseria flavescens NRL30031/H210] gi|224952533|gb|EEG33742.1| hypothetical protein NEIFLAOT_01225 [Neisseria flavescens NRL30031/H210] Length = 241 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + EI +++ +T++ G NG GKS+L A+ Sbjct: 17 KTLLEIDQLDIPSGMTVIIGPNGAGKSTLLRAL 49 >gi|171778670|ref|ZP_02919766.1| hypothetical protein STRINF_00618 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282627|gb|EDT48051.1| hypothetical protein STRINF_00618 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 552 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|329910248|ref|ZP_08275266.1| Exonuclease SbcC [Oxalobacteraceae bacterium IMCC9480] gi|327546234|gb|EGF31272.1| Exonuclease SbcC [Oxalobacteraceae bacterium IMCC9480] Length = 1240 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + ++F L ++G G GKS+L +A+ Y T R Sbjct: 1 MKILAIRGRNLASLAGDFTVDFEQEPLKSAGLFAISGPTGAGKSTLLDALCMALYEETPR 60 >gi|308051213|ref|YP_003914779.1| ATPase AAA [Ferrimonas balearica DSM 9799] gi|307633403|gb|ADN77705.1| AAA ATPase [Ferrimonas balearica DSM 9799] Length = 483 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L IE+ RG++ Q+++ + + + G+NG GKS++ +A ++ + + + Sbjct: 23 LEWIELDGLRGWSG-QRVDLSFPIVAICGENGAGKSTIIQAAASIYDSTSDEKHYASD 79 >gi|270293693|ref|ZP_06199895.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275160|gb|EFA21020.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 436 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 22/83 (26%) Query: 29 LLDIEISHFRGFTEIQKIE---------FADHLT------------IVNGQNGYGKSSLS 67 +L + + +F F + + + ++H+T V G NG GKS+L Sbjct: 2 ILRVILKNFLSFNDEVQFDMFPNMKRTTLSNHITMLDGKLPVLKMAAVYGANGAGKSNLL 61 Query: 68 EAIEWLFYGYTQRR-KHGDSIKK 89 + I +L T + +GDS+ + Sbjct: 62 KGINFLKAIATNKNFLNGDSVGR 84 >gi|270263651|ref|ZP_06191920.1| hypothetical protein SOD_e02760 [Serratia odorifera 4Rx13] gi|270042535|gb|EFA15630.1| hypothetical protein SOD_e02760 [Serratia odorifera 4Rx13] Length = 666 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLHNFRVFNGTHTIDLAPRKRRHDDNPRPIILFGGLNGAGKTSILSAIRLALYG 60 >gi|228918563|ref|ZP_04082005.1| hypothetical protein bthur0012_56990 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841088|gb|EEM86288.1| hypothetical protein bthur0012_56990 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 521 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I K+ +I+I +++ + + F + L + G N GKS++ EA+ Sbjct: 6 IMKIQEIKIFNYKTTVDFEFNCFKNGLNVFIGTNNVGKSNILEAL 50 >gi|322701334|gb|EFY93084.1| structural maintenance of chromosomes 5 smc5 [Metarhizium acridum CQMa 102] Length = 1119 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 ++ + + +F + E + HL +V G NG GKSSL AI GY+ + Sbjct: 77 IVRVSVQNFVTY-EKAEFFPGPHLNMVIGPNGTGKSSLVCAI--CLGLGYSPKHL 128 >gi|320588482|gb|EFX00951.1| DNA repair protein [Grosmannia clavigera kw1407] Length = 1225 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + +F T + E L + G+NG GKS++ AI G S+K Sbjct: 183 IERVTCVNFMCHT-RLECELGPLLNFIVGENGSGKSAILTAITLCLGAKASATNRGGSLK 241 >gi|302385757|ref|YP_003821579.1| ATP-dependent OLD family endonuclease [Clostridium saccharolyticum WM1] gi|302196385|gb|ADL03956.1| ATP-dependent OLD family endonuclease [Clostridium saccharolyticum WM1] Length = 618 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 ++ + I +F+ +++ I+ ++ I+ G+N GK+ + +AI Y Sbjct: 1 MQITSVHIKNFKSIRDME-IQGVENALILVGKNNTGKTGILDAIRAAAGAY 50 >gi|289548973|ref|YP_003473961.1| SMC domain protein [Thermocrinis albus DSM 14484] gi|289182590|gb|ADC89834.1| SMC domain protein [Thermocrinis albus DSM 14484] Length = 501 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL + I FR + ++ F+ L ++ G+ G GKS A+ +L Sbjct: 2 LLRLSIESFRLLKD-VELNFSPGLNVITGETGSGKSMTFSAVRFLAG 47 >gi|281421324|ref|ZP_06252323.1| putative RecF/RecN/SMC N domain protein [Prevotella copri DSM 18205] gi|281404396|gb|EFB35076.1| putative RecF/RecN/SMC N domain protein [Prevotella copri DSM 18205] Length = 362 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + +++ F + D L I+ G N GKS++ +A +L Sbjct: 2 ITKIRLQNWKSFKDSTIY--IDSLGILIGTNASGKSNVLDAFAFL 44 >gi|50542984|ref|XP_499658.1| YALI0A01562p [Yarrowia lipolytica] gi|49645523|emb|CAG83578.1| YALI0A01562p [Yarrowia lipolytica] Length = 1117 Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I + + + + + F L V G NG GKS++ AI Sbjct: 72 ILQIYMKNVMSY-DECLVNFGPTLNFVIGPNGSGKSTMLAAI 112 >gi|328769187|gb|EGF79231.1| hypothetical protein BATDEDRAFT_89546 [Batrachochytrium dendrobatidis JAM81] Length = 1142 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ I++++F ++ ++ +L +V G NG GKS++ AI G Sbjct: 111 IVRIKLTNFLTYSAVEFYP-GPNLNMVVGPNGTGKSTVVCAIALGLCG 157 >gi|307289309|ref|ZP_07569265.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0109] gi|306500018|gb|EFM69379.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0109] gi|315163923|gb|EFU07940.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1302] Length = 238 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIE---------FADHLTIVNGQNGYGKSSLSEAI 70 L +E+ F + KIE F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLELKAFEEDSVFSKIEGLNKFNLLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|300820009|ref|ZP_07100189.1| conserved domain protein [Escherichia coli MS 107-1] gi|300527458|gb|EFK48520.1| conserved domain protein [Escherichia coli MS 107-1] Length = 78 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFTHDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|300919013|ref|ZP_07135562.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300413862|gb|EFJ97172.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 520 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFTHDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|300837015|ref|YP_003754069.1| hypothetical protein pKP048_p076 [Klebsiella pneumoniae] gi|299474819|gb|ADJ18643.1| hypothetical protein [Klebsiella pneumoniae] Length = 520 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFTHDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|297564697|ref|YP_003683669.1| ABC transporter-like protein [Meiothermus silvanus DSM 9946] gi|296849146|gb|ADH62161.1| ABC transporter related protein [Meiothermus silvanus DSM 9946] Length = 234 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIE-WLFYGYTQRRKHGDSIKKRSIKTPMPMCM 100 + F LT V G +G GK++L + + + R G + + S + + Sbjct: 22 DHFSFRFPPGLTAVVGPSGSGKTTLLNLLAGFDVPTEGEVRLDGTVLSRLSEDARSEVRL 81 >gi|227548531|ref|ZP_03978580.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] gi|227079360|gb|EEI17323.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] Length = 239 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI---KKRSIKT 94 + E+ ++E A +T++ G NG GKS+L AI + +G+ + + Sbjct: 29 KHLRELGRLELAQPVTVITGDNGVGKSTLLNAIARGYGYSVIGGTYGNGAPGPRDPLYRA 88 Query: 95 PMPMCMAVPRCKYQLK 110 C P+ Y L+ Sbjct: 89 VRLECSVRPKQGYFLR 104 >gi|152973641|ref|YP_001338681.1| hypothetical protein KPN_pKPN4p07072 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|294496717|ref|YP_003560410.1| hypothetical protein pKpQIL_p033 [Klebsiella pneumoniae] gi|150958423|gb|ABR80451.1| hypothetical protein KPN_pKPN4p07072 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|293339426|gb|ADE43980.1| hypothetical protein [Klebsiella pneumoniae] Length = 236 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F E+ + F I+ G N GKS++ A++ + R Sbjct: 4 ITRLMLQNFKKFPELD-LRFTHDRNILVGDNESGKSTILLALDLVLSDSRHR 54 >gi|88857856|ref|ZP_01132498.1| DNA repair protein recN [Pseudoalteromonas tunicata D2] gi|88819473|gb|EAR29286.1| DNA repair protein recN [Pseudoalteromonas tunicata D2] Length = 556 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ +E+++F +E++ E+ +T + G+ G GKS +A+ + Sbjct: 2 LIALEVNNFAIVSELET-EWQPGMTTITGETGAGKSIAIDALSLCLGERAEASM 54 >gi|310639444|ref|YP_003944203.1| hypothetical protein EIO_3106 [Ketogulonicigenium vulgare Y25] gi|308753020|gb|ADO44164.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25] Length = 686 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 ++I +FR + +I F D T++ G+N GK+S++E L T Sbjct: 1 MKIENFRLLQD-VEIGFEDRTTLIVGRNNSGKTSIAELFRRLLSEKT 46 >gi|262382196|ref|ZP_06075334.1| pgaA protein [Bacteroides sp. 2_1_33B] gi|262297373|gb|EEY85303.1| pgaA protein [Bacteroides sp. 2_1_33B] Length = 432 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + +I + +FR +TE+ I + ++ G N GK+S+ A +++ Sbjct: 1 MKEIRLENFRCYTEL-SIPLKSRVNLLVGDNATGKTSVLRACKFVL 45 >gi|257869061|ref|ZP_05648714.1| DNA repair protein RecN [Enterococcus gallinarum EG2] gi|257803225|gb|EEV32047.1| DNA repair protein RecN [Enterococcus gallinarum EG2] Length = 556 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F + F + +T + G+ G GKS + +A+ L G R D ++ Sbjct: 2 LLELTIQNF-AIISHLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGG----RGSTDYLR 56 Query: 89 KRSIKTPMP 97 + + K + Sbjct: 57 QGAEKCRLE 65 >gi|167771438|ref|ZP_02443491.1| hypothetical protein ANACOL_02804 [Anaerotruncus colihominis DSM 17241] gi|167666078|gb|EDS10208.1| hypothetical protein ANACOL_02804 [Anaerotruncus colihominis DSM 17241] Length = 454 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + KL+ + + + ++F +T + G NG GK+++ E + G + Sbjct: 1 MTVKLIRLVVKGLHESYDYA-VDFNQDVTFIYGTNGCGKTTILNITEAIITGQLYK 55 >gi|281491379|ref|YP_003353359.1| cobalamin/Fe3+-siderophores ABC transporter ATPase [Lactococcus lactis subsp. lactis KF147] gi|161702143|gb|ABX75610.1| ABC-type cobalamin/Fe3+-siderophores transporter, ATPase component [Lactococcus lactis subsp. lactis KF147] Length = 259 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 13/60 (21%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 A L+ +LT Y +K+I LDI F +H++++ G NG GKS+L + + Sbjct: 5 ALLAHNLTLSYQKKIIIDSLDI------SF-------LKNHISVIIGPNGCGKSTLLKGL 51 >gi|17228003|ref|NP_484551.1| hypothetical protein alr0507 [Nostoc sp. PCC 7120] gi|17129852|dbj|BAB72465.1| alr0507 [Nostoc sp. PCC 7120] Length = 394 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 K++ I+I ++R F E +I+ ++ G NG GKS+L + Sbjct: 1 MKIVSIKIKNYRAF-ESLEIKEIPTFCVIIGANGTGKSTLFD 41 >gi|308067255|ref|YP_003868860.1| ATPase [Paenibacillus polymyxa E681] gi|305856534|gb|ADM68322.1| Predicted ATPase [Paenibacillus polymyxa E681] Length = 253 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 22/35 (62%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + +++F +T + G+NG GKS+L EAI Sbjct: 29 NLKALHQWNELKFHPSVTYIIGENGVGKSTLMEAI 63 >gi|225018817|ref|ZP_03708009.1| hypothetical protein CLOSTMETH_02767 [Clostridium methylpentosum DSM 5476] gi|224948377|gb|EEG29586.1| hypothetical protein CLOSTMETH_02767 [Clostridium methylpentosum DSM 5476] Length = 556 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 E IEF + + + G+ G GKS + +AI + G + Sbjct: 14 EKVYIEFDNGMNVFTGETGAGKSIVIDAINAILGGRCSKEL 54 >gi|221142082|ref|ZP_03566575.1| exodeoxyribonuclease SbcC [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 799 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|217979344|ref|YP_002363491.1| DNA replication and repair protein RecF [Methylocella silvestris BL2] gi|217504720|gb|ACK52129.1| DNA replication and repair protein RecF [Methylocella silvestris BL2] Length = 398 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + ++ FR + + +E ++ G NG GK+++ EA+ L G RR Sbjct: 23 VRRLTLADFRSYASLD-MEILAQTVVLTGDNGAGKTNVLEALSLLTPGRGLRR 74 >gi|171058643|ref|YP_001790992.1| hypothetical protein Lcho_1960 [Leptothrix cholodnii SP-6] gi|170776088|gb|ACB34227.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 522 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + + +F+ F ++ +EF L I+ G N GKSS+ +A+E + + Sbjct: 1 MVTIRRLVLKNFKRFRTLE-LEFDGELNILVGGNEAGKSSVLQAMEIVLSASRSK 54 >gi|189091834|ref|XP_001929750.1| hypothetical protein [Podospora anserina S mat+] gi|27803028|emb|CAD60731.1| unnamed protein product [Podospora anserina] gi|188219270|emb|CAP49250.1| unnamed protein product [Podospora anserina S mat+] Length = 1191 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 19/42 (45%) Query: 47 EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 E L V G+NG GKS++ AI G G S+K Sbjct: 163 ELGPLLNFVVGENGSGKSAVLTAITLCLGGKASSTNRGGSLK 204 >gi|113475598|ref|YP_721659.1| hypothetical protein Tery_1931 [Trichodesmium erythraeum IMS101] gi|110166646|gb|ABG51186.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 660 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 13/81 (16%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 L++ + +F + Q I + + G NG GK++L +AI YG+ + Sbjct: 4 LELVLQNFGPYFGKQTINLRPTLSDRPCPIILFGGMNGGGKTTLLDAIRLALYGHRAQCS 63 Query: 82 -----KHGDSIKKRSIKTPMP 97 +GD + + + P Sbjct: 64 TRGNLTYGDFLSQCVNRNTPP 84 >gi|330718764|ref|ZP_08313364.1| DNA repair ATPase [Leuconostoc fallax KCTC 3537] Length = 803 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ IEI F G Q L + G N GKS++ I + +GY ++ H + Sbjct: 1 MRIKAIEIIGF-GRWSKQNFLVDRQLQVFTGPNESGKSTIRAFIVGVLFGYPSKKAHQN 58 >gi|320583658|gb|EFW97871.1| Protein involved in recombination repair [Pichia angusta DL-1] Length = 756 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 K++F + + G+NG GKS++ I G+S+K Sbjct: 7 KLDFGEQTNFIIGRNGSGKSAILTGISVALGAKASDTDRGNSLK 50 >gi|319787256|ref|YP_004146731.1| DNA repair protein RecN [Pseudoxanthomonas suwonensis 11-1] gi|317465768|gb|ADV27500.1| DNA repair protein RecN [Pseudoxanthomonas suwonensis 11-1] Length = 580 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + + F ++EF +T+++G+ G GKS L +A+ +L Sbjct: 2 LTHLALKDF-AVVRATELEFGPGMTVISGETGAGKSLLVDALGFLSG 47 >gi|227543911|ref|ZP_03973960.1| DNA repair ATPase [Lactobacillus reuteri CF48-3A] gi|300909658|ref|ZP_07127119.1| exopolyphosphatase [Lactobacillus reuteri SD2112] gi|227186112|gb|EEI66183.1| DNA repair ATPase [Lactobacillus reuteri CF48-3A] gi|300893523|gb|EFK86882.1| exopolyphosphatase [Lactobacillus reuteri SD2112] Length = 830 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ + I F + + Q +F + I+ G N GK++L + + +G+ R Sbjct: 1 MKIKKVRIDGFGKWHD-QDFDFTANPQIIYGPNEAGKTTLMAFLVSILFGFADGRGK 56 >gi|218708100|ref|YP_002415721.1| recombination protein F [Vibrio splendidus LGP32] gi|254790499|sp|B7VGI6|RECF_VIBSL RecName: Full=DNA replication and repair protein recF gi|218321119|emb|CAV17069.1| DNA replication and repair protein recF [Vibrio splendidus LGP32] Length = 359 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR E I+ + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIVKQFRNI-EACDIQPSSGFNFLIGANGSGKTSVLEAVYLLGHGRSFKS 54 >gi|166365936|ref|YP_001658209.1| hypothetical protein MAE_31950 [Microcystis aeruginosa NIES-843] gi|166088309|dbj|BAG03017.1| hypothetical protein MAE_31950 [Microcystis aeruginosa NIES-843] Length = 395 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ I ++ ++ + ++R +++ ++ LT+ G NG GKS++ + +L Sbjct: 2 SKNSIPRIENLRVQNYRALQDLE-LKSITPLTVFLGPNGSGKSTIFDVFAFL 52 >gi|166365891|ref|YP_001658164.1| ATPase [Microcystis aeruginosa NIES-843] gi|166088264|dbj|BAG02972.1| predicted ATPase [Microcystis aeruginosa NIES-843] Length = 395 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 ++ I ++ ++ + ++R +++ ++ LT+ G NG GKS++ + +L Sbjct: 2 SKNSIPRIENLRVQNYRALQDLE-LKSITPLTVFLGPNGSGKSTIFDVFAFL 52 >gi|50553286|ref|XP_504054.1| YALI0E17193p [Yarrowia lipolytica] gi|49649923|emb|CAG79647.1| YALI0E17193p [Yarrowia lipolytica] Length = 1117 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L I + + + + + F L V G NG GKS++ AI Sbjct: 72 ILQIYMKNVMSY-DECLVNFGPTLNFVIGPNGSGKSTMLAAI 112 >gi|84394123|ref|ZP_00992857.1| recombination protein F [Vibrio splendidus 12B01] gi|84375269|gb|EAP92182.1| recombination protein F [Vibrio splendidus 12B01] Length = 359 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + FR E I+ + + G NG GK+S+ EA+ L +G + + Sbjct: 1 MPLSRLIVKQFRNI-EACDIQPSSGFNFLIGANGSGKTSVLEAVYLLGHGRSFKS 54 >gi|83945629|ref|ZP_00957975.1| ABC transporter, ATP-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83850995|gb|EAP88854.1| ABC transporter, ATP-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 527 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 12/60 (20%) Query: 11 ACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ACLS + S + + F + F+ +T + G NG GKS+L +A+ Sbjct: 3 ACLSANSLSLHTPD-----HTCLLEGF-------TLSFSTEVTGIVGPNGAGKSTLLKAL 50 >gi|66803272|ref|XP_635479.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|60463799|gb|EAL61975.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1131 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ I++++F +++ + L ++ G NG GKSS+ AI Sbjct: 70 IVRIKLNNFVTYSD-VEFRPGPRLNVIIGPNGSGKSSIVCAI 110 >gi|327482927|gb|AEA77334.1| DNA recombination and repair protein RecF [Vibrio cholerae LMA3894-4] Length = 357 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 2 IQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 48 >gi|319641268|ref|ZP_07995967.1| hypothetical protein HMPREF9011_01564 [Bacteroides sp. 3_1_40A] gi|317387141|gb|EFV68021.1| hypothetical protein HMPREF9011_01564 [Bacteroides sp. 3_1_40A] Length = 666 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+IS+F+ + + + ++ G NG GK++L EAI YG K Sbjct: 1 MLIQKIKISNFKTYLSLDLDLTVDDDRPIILIGGSNGGGKTTLFEAISGALYGLKIESK 59 >gi|284048219|ref|YP_003398558.1| DNA repair protein RecN [Acidaminococcus fermentans DSM 20731] gi|283952440|gb|ADB47243.1| DNA repair protein RecN [Acidaminococcus fermentans DSM 20731] Length = 574 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +E+ +F + +++F + G+ G GKS L +A + Sbjct: 2 LNSLEVHNF-ALIDRLRVDFTPGFNVFTGETGAGKSILIDAFSIVLG 47 >gi|257092809|ref|YP_003166450.1| urea ABC transporter ATP-binding protein UrtD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045333|gb|ACV34521.1| urea ABC transporter, ATP-binding protein UrtD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 280 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIE 71 + K+I L DI +S F GF + K+ A L + G NG GK+++ + I Sbjct: 35 SHKVILYLEDITVS-FDGFRALNKLSLTIDAGELRCIIGPNGAGKTTMMDVIT 86 >gi|255746804|ref|ZP_05420750.1| DNA recombination and repair protein RecF [Vibrio cholera CIRS 101] gi|262155883|ref|ZP_06029005.1| DNA recombination and repair protein RecF [Vibrio cholerae INDRE 91/1] gi|262167102|ref|ZP_06034817.1| DNA recombination and repair protein RecF [Vibrio cholerae RC27] gi|255735561|gb|EET90960.1| DNA recombination and repair protein RecF [Vibrio cholera CIRS 101] gi|262024488|gb|EEY43174.1| DNA recombination and repair protein RecF [Vibrio cholerae RC27] gi|262030335|gb|EEY48977.1| DNA recombination and repair protein RecF [Vibrio cholerae INDRE 91/1] Length = 357 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 I FR I + + G NG GK+S+ EAI L +G + + Sbjct: 2 IQQFRNIKACD-IRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKS 48 >gi|319901304|ref|YP_004161032.1| DNA replication and repair protein RecF [Bacteroides helcogenes P 36-108] gi|319416335|gb|ADV43446.1| DNA replication and repair protein RecF [Bacteroides helcogenes P 36-108] Length = 369 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +AI +L + + Sbjct: 3 LKRISILNYKNL-EQVELSFSAKLNCFFGQNGMGKTNLLDAIYFLSFCKSA 52 >gi|219120977|ref|XP_002185720.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582569|gb|ACI65190.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 220 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ + +F ++ ++ ++GQNG GKS++ AI+ R ++K Sbjct: 66 IKEVYVENFMCHP-KLRVTLCRNVNFIHGQNGSGKSAILAAIQICLGASASRTHRARNLK 124 Query: 89 KRSIKTPMPMCMAVPR 104 K P A R Sbjct: 125 GLVRKDAGPNATAKVR 140 >gi|253698659|ref|YP_003019848.1| DNA replication and repair protein RecF [Geobacter sp. M21] gi|259563661|sp|C6E7Q7|RECF_GEOSM RecName: Full=DNA replication and repair protein recF gi|251773509|gb|ACT16090.1| DNA replication and repair protein RecF [Geobacter sp. M21] Length = 364 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL+ ++++ FR Q IE A + G NG GK++L E+I L + ++ Sbjct: 1 MKLIKLKLASFRNL---QNIELAPGKKFNVFYGNNGQGKTNLLESIYLLATMKSFKQARN 57 Query: 85 DSIK 88 + Sbjct: 58 AELI 61 >gi|170016842|ref|YP_001727761.1| DNA repair protein RecN [Leuconostoc citreum KM20] gi|169803699|gb|ACA82317.1| DNA repair protein RecN [Leuconostoc citreum KM20] Length = 565 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F E ++F D +T++ G+ G GKS + A+ L G Sbjct: 6 LENLVIENF-AIIEKIDLQFEDGMTVLTGETGAGKSIIIGALLLLTGG 52 >gi|154249514|ref|YP_001410339.1| hypothetical protein Fnod_0829 [Fervidobacterium nodosum Rt17-B1] gi|154153450|gb|ABS60682.1| hypothetical protein Fnod_0829 [Fervidobacterium nodosum Rt17-B1] Length = 817 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L +I+ F + Q F + IV G N GK++L+ I + + Sbjct: 1 MFLKKAKINGFGKLIDRQ-FNFTPGMNIVFGPNESGKTTLARFILYTLSNPSNEALK 56 >gi|186684606|ref|YP_001867802.1| hypothetical protein Npun_F4493 [Nostoc punctiforme PCC 73102] gi|186467058|gb|ACC82859.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 661 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 8/59 (13%) Query: 30 LDIEISHFRGFTEIQKIEFAD--------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F ++ Q I + ++ G NG GK++L +AI YG + Sbjct: 4 LELVLQNFGPYSGKQVINLNPKIDEETSHPIILLGGMNGGGKTTLMDAIRLALYGARAQ 62 >gi|332522831|ref|ZP_08399083.1| DNA repair protein RecN [Streptococcus porcinus str. Jelinkova 176] gi|332314095|gb|EGJ27080.1| DNA repair protein RecN [Streptococcus porcinus str. Jelinkova 176] Length = 553 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F + +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLSFDNGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|325124294|gb|ADY83817.1| protein used in recombination and DNA repair [Acinetobacter calcoaceticus PHEA-2] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|313896559|ref|ZP_07830108.1| DNA repair protein RecN [Selenomonas sp. oral taxon 137 str. F0430] gi|312974744|gb|EFR40210.1| DNA repair protein RecN [Selenomonas sp. oral taxon 137 str. F0430] Length = 574 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + +F E +EF L I+ G+ G GKS L +A+ + +R D+I+ Sbjct: 2 LKSLHVRNF-ALLEDVSVEFGAGLNILTGETGAGKSILIDALGAILG----QRVSTDAIR 56 >gi|307943927|ref|ZP_07659269.1| urea ABC transporter, ATP-binding protein UrtD [Roseibium sp. TrichSKD4] gi|307772768|gb|EFO31987.1| urea ABC transporter, ATP-binding protein UrtD [Roseibium sp. TrichSKD4] Length = 249 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L + +S F GF I ++ FA L + G NG GK+++ + I + + K Sbjct: 7 LLELDKVSVS-FDGFKAINELSFAIGSAELRAIIGPNGAGKTTMMDIITGKTRADSGQVK 65 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQ 108 +GD + + A K+Q Sbjct: 66 YGDHAIDLQNLSESAIAQAGIGRKFQ 91 >gi|299771796|ref|YP_003733822.1| ATPase [Acinetobacter sp. DR1] gi|298701884|gb|ADI92449.1| ATPase [Acinetobacter sp. DR1] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|293610122|ref|ZP_06692423.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827354|gb|EFF85718.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|262280746|ref|ZP_06058529.1| DNA repair protein RecN [Acinetobacter calcoaceticus RUH2202] gi|262257646|gb|EEY76381.1| DNA repair protein RecN [Acinetobacter calcoaceticus RUH2202] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|260556312|ref|ZP_05828531.1| DNA repair protein RecN [Acinetobacter baumannii ATCC 19606] gi|260410367|gb|EEX03666.1| DNA repair protein RecN [Acinetobacter baumannii ATCC 19606] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|260550509|ref|ZP_05824719.1| recombination and DNA repair protein [Acinetobacter sp. RUH2624] gi|260406424|gb|EEW99906.1| recombination and DNA repair protein [Acinetobacter sp. RUH2624] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|255722149|ref|XP_002546009.1| hypothetical protein CTRG_00790 [Candida tropicalis MYA-3404] gi|240136498|gb|EER36051.1| hypothetical protein CTRG_00790 [Candida tropicalis MYA-3404] Length = 1073 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--QRRKHGDS 86 + ++++ +F ++ + + L ++ G NG GKS+L +I G +RK+ S Sbjct: 26 IRNVKVWNFTTYS-YTEFCLSPTLNMIIGPNGSGKSTLVASICIGLAGNITLIKRKNLKS 84 Query: 87 IKKRSIKT 94 + K ++ Sbjct: 85 MIKTGHES 92 >gi|239500944|ref|ZP_04660254.1| DNA repair protein RecN [Acinetobacter baumannii AB900] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|215484858|ref|YP_002327097.1| DNA repair protein RecN [Acinetobacter baumannii AB307-0294] gi|332854388|ref|ZP_08435340.1| DNA repair protein RecN [Acinetobacter baumannii 6013150] gi|332867603|ref|ZP_08437751.1| DNA repair protein RecN [Acinetobacter baumannii 6013113] gi|213988549|gb|ACJ58848.1| DNA repair protein RecN [Acinetobacter baumannii AB307-0294] gi|332728064|gb|EGJ59455.1| DNA repair protein RecN [Acinetobacter baumannii 6013150] gi|332733877|gb|EGJ65023.1| DNA repair protein RecN [Acinetobacter baumannii 6013113] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|193076170|gb|ABO10785.2| recombination and DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|184156657|ref|YP_001844996.1| ATPase [Acinetobacter baumannii ACICU] gi|332873065|ref|ZP_08441022.1| DNA repair protein RecN [Acinetobacter baumannii 6014059] gi|183208251|gb|ACC55649.1| ATPase [Acinetobacter baumannii ACICU] gi|323516423|gb|ADX90804.1| ATPase [Acinetobacter baumannii TCDC-AB0715] gi|332738577|gb|EGJ69447.1| DNA repair protein RecN [Acinetobacter baumannii 6014059] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|169634565|ref|YP_001708301.1| protein used in recombination and DNA repair [Acinetobacter baumannii SDF] gi|169153357|emb|CAP02474.1| protein used in recombination and DNA repair [Acinetobacter baumannii] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|169797420|ref|YP_001715213.1| protein used in recombination and DNA repair [Acinetobacter baumannii AYE] gi|213155766|ref|YP_002317811.1| DNA repair protein RecN [Acinetobacter baumannii AB0057] gi|301345139|ref|ZP_07225880.1| DNA repair protein RecN [Acinetobacter baumannii AB056] gi|301510700|ref|ZP_07235937.1| DNA repair protein RecN [Acinetobacter baumannii AB058] gi|301594960|ref|ZP_07239968.1| DNA repair protein RecN [Acinetobacter baumannii AB059] gi|169150347|emb|CAM88244.1| protein used in recombination and DNA repair [Acinetobacter baumannii AYE] gi|213054926|gb|ACJ39828.1| DNA repair protein RecN [Acinetobacter baumannii AB0057] Length = 555 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F + I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|159030487|emb|CAO91391.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 394 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 K++ I+I ++R F + I ++ G NG GKS+L + Sbjct: 1 MKIVSIKIKNYRMF-KNIHIRNIPPFCVIIGANGTGKSTLFD 41 >gi|89070494|ref|ZP_01157787.1| molybdate ABC transporter, ATP-binding protein [Oceanicola granulosus HTCC2516] gi|89043898|gb|EAR50089.1| molybdate ABC transporter, ATP-binding protein [Oceanicola granulosus HTCC2516] Length = 359 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 F GF E +T++ G++G GKS++ +A+ L Sbjct: 11 FGGFALDVAFEAPAGITVLFGRSGSGKSTIVDAVAGLLR 49 >gi|322705493|gb|EFY97078.1| structural maintenance of chromosome complex subunit SmcA [Metarhizium anisopliae ARSEF 23] Length = 1119 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY-GYTQRRK 82 ++ + + +F + E + HL +V G NG GKSSL AI GY+ + Sbjct: 77 IVRVSVQNFVTY-EKAEFFPGPHLNMVIGPNGTGKSSLVCAI--CLGLGYSPKHL 128 >gi|291458158|ref|ZP_06597548.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419241|gb|EFE92960.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 573 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 KL+++ I F F + + +D L ++ G+N GKS+L + +FYG Sbjct: 1 MKLIELRIHGFGKFHDYT-LPLSDGLNLIYGRNEAGKSTLHHFLRSMFYG 49 >gi|259418051|ref|ZP_05741970.1| recombination protein F [Silicibacter sp. TrichCH4B] gi|259346957|gb|EEW58771.1| recombination protein F [Silicibacter sp. TrichCH4B] Length = 365 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + L + +SHFR + ++G NG GK+++ EA+ G RR Sbjct: 1 MLALTSLFMSHFRSHL-RADLHLDARPVAIHGNNGAGKTNILEAVSLFSPGRGIRRASAA 59 Query: 86 SIKKR 90 + +R Sbjct: 60 DMARR 64 >gi|255319899|ref|ZP_05361100.1| ATP-dependent dsDNA exonuclease [Acinetobacter radioresistens SK82] gi|262379206|ref|ZP_06072362.1| ATP-dependent dsDNA exonuclease [Acinetobacter radioresistens SH164] gi|255303032|gb|EET82248.1| ATP-dependent dsDNA exonuclease [Acinetobacter radioresistens SK82] gi|262298663|gb|EEY86576.1| ATP-dependent dsDNA exonuclease [Acinetobacter radioresistens SH164] Length = 1200 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K++ +++ + Q+I F L + G G GKS+L +A+ + R Sbjct: 1 MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60 Query: 81 -RKHGDSIKKRS 91 + H +K S Sbjct: 61 LKTHEGKLKDVS 72 >gi|269954916|ref|YP_003324705.1| ABC transporter-like protein [Xylanimonas cellulosilytica DSM 15894] gi|269303597|gb|ACZ29147.1| ABC transporter related protein [Xylanimonas cellulosilytica DSM 15894] Length = 302 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 52 LTIVNGQNGYGKSSLSEAI---------EWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 +T + G NG GK++L I W F G + K G ++ + + + A+ Sbjct: 56 ITALIGPNGAGKTTLFNLITGFDQANHGTWSFDGKSIAGKSGAAVARSGMVRTFQLTKAL 115 Query: 103 PR 104 R Sbjct: 116 SR 117 >gi|97180901|sp|Q4UNG8|RECF_RICFE RecName: Full=DNA replication and repair protein recF Length = 364 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R F ++ ++ + I+ G+NG GK+++ EAI + G R Sbjct: 4 IFLHSLTLENYRNFKNLE-LKTDNTPIILIGENGSGKTNILEAISLFYPGRGLRSAKLAD 62 Query: 87 IKKRSIKT 94 I K S Sbjct: 63 ICKASEDQ 70 >gi|14590094|ref|NP_142158.1| hypothetical protein PH0155 [Pyrococcus horikoshii OT3] gi|3256541|dbj|BAA29224.1| 317aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 317 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + I + FRG E++ + ++ G+N GKS+L EA+ LF G + G+ Sbjct: 2 IDSIRVEGFRGLKELELSSLRR-INVIVGRNNSGKSTLLEALS-LFLGSSDPGTFGN 56 >gi|332366061|gb|EGJ43817.1| DNA repair protein RecN [Streptococcus sanguinis SK1059] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|332363442|gb|EGJ41225.1| DNA repair protein RecN [Streptococcus sanguinis SK355] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|332362903|gb|EGJ40696.1| DNA repair protein RecN [Streptococcus sanguinis SK49] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|332361745|gb|EGJ39549.1| DNA repair protein RecN [Streptococcus sanguinis SK1056] Length = 559 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|329737322|gb|EGG73576.1| hypothetical protein SEVCU028_2379 [Staphylococcus epidermidis VCU028] Length = 979 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|327489510|gb|EGF21303.1| DNA repair protein RecN [Streptococcus sanguinis SK1058] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|327469002|gb|EGF14474.1| DNA repair protein RecN [Streptococcus sanguinis SK330] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|327461657|gb|EGF07988.1| DNA repair protein RecN [Streptococcus sanguinis SK1] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|327458740|gb|EGF05088.1| DNA repair protein RecN [Streptococcus sanguinis SK1057] Length = 559 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|325697094|gb|EGD38981.1| DNA repair protein RecN [Streptococcus sanguinis SK160] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|325694098|gb|EGD36016.1| DNA repair protein RecN [Streptococcus sanguinis SK150] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|325688245|gb|EGD30264.1| DNA repair protein RecN [Streptococcus sanguinis SK72] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|324993382|gb|EGC25302.1| DNA repair protein RecN [Streptococcus sanguinis SK405] gi|324995305|gb|EGC27217.1| DNA repair protein RecN [Streptococcus sanguinis SK678] gi|325690174|gb|EGD32178.1| DNA repair protein RecN [Streptococcus sanguinis SK115] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|324990644|gb|EGC22580.1| DNA repair protein RecN [Streptococcus sanguinis SK353] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|322385060|ref|ZP_08058710.1| DNA repair protein RecN [Streptococcus cristatus ATCC 51100] gi|321270970|gb|EFX53880.1| DNA repair protein RecN [Streptococcus cristatus ATCC 51100] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|319401109|gb|EFV89328.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] Length = 979 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|303235228|ref|ZP_07321846.1| conserved hypothetical protein [Finegoldia magna BVS033A4] gi|302493542|gb|EFL53330.1| conserved hypothetical protein [Finegoldia magna BVS033A4] Length = 518 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + I + +F+ F + L I+ G N GKSS+ EAIE + G +R Sbjct: 1 MTITIEKIRLINFKRFKDYTICPNGR-LNILVGDNEVGKSSVLEAIELVSSGNVRR 55 >gi|294792205|ref|ZP_06757353.1| hypothetical protein HMPREF0874_00653 [Veillonella sp. 6_1_27] gi|294457435|gb|EFG25797.1| hypothetical protein HMPREF0874_00653 [Veillonella sp. 6_1_27] Length = 564 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I ++R ++ + F + + G+N GKS+ + +E + Sbjct: 10 MYIKWMHIENYRNLADVT-LSFHNDINYFVGENAVGKSNFLDLLEIIM 56 >gi|294794069|ref|ZP_06759206.1| hypothetical protein HMPREF0873_00663 [Veillonella sp. 3_1_44] gi|294455639|gb|EFG24011.1| hypothetical protein HMPREF0873_00663 [Veillonella sp. 3_1_44] Length = 564 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I ++R ++ + F + + G+N GKS+ + +E + Sbjct: 10 MYIKWMHIENYRNLADVT-LSFHNDINYFVGENAVGKSNFLDLLEIIM 56 >gi|282850579|ref|ZP_06259958.1| hypothetical protein HMPREF1035_1912 [Veillonella parvula ATCC 17745] gi|282580072|gb|EFB85476.1| hypothetical protein HMPREF1035_1912 [Veillonella parvula ATCC 17745] Length = 555 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I ++R ++ + F + + G+N GKS+ + +E + Sbjct: 1 MYIKWMHIENYRNLADVT-LSFHNDINYFVGENAVGKSNFLDLLEIIM 47 >gi|296126564|ref|YP_003633816.1| abortive infection protein [Brachyspira murdochii DSM 12563] gi|296018380|gb|ADG71617.1| abortive infection protein [Brachyspira murdochii DSM 12563] Length = 392 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 21/81 (25%) Query: 29 LLDIEISHFRGFTEIQKI----------------EFADHLTIVNGQNGYGKSSLSEAIEW 72 L IS++R F + ++ E+ L ++ G NG GKS+L A+++ Sbjct: 2 LKRFTISNYRSFYDEAELNLIADKDTIYTKKINNEYISKLCLLYGYNGCGKSNLLNALKY 61 Query: 73 LFY---GYTQRRKHGDSIKKR 90 +FY GY DSIK+ Sbjct: 62 IFYSNNGYIISS--DDSIKRL 80 >gi|125717534|ref|YP_001034667.1| DNA repair and genetic recombination [Streptococcus sanguinis SK36] gi|125497451|gb|ABN44117.1| DNA repair and genetic recombination, putative [Streptococcus sanguinis SK36] gi|327473377|gb|EGF18797.1| DNA repair protein RecN [Streptococcus sanguinis SK408] Length = 552 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFEQGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|27468442|ref|NP_765079.1| hypothetical protein SE1524 [Staphylococcus epidermidis ATCC 12228] gi|57867318|ref|YP_188948.1| hypothetical protein SERP1379 [Staphylococcus epidermidis RP62A] gi|293366179|ref|ZP_06612865.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|27315989|gb|AAO05123.1|AE016749_69 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637976|gb|AAW54764.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|291319701|gb|EFE60061.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 979 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|332291066|ref|YP_004429675.1| DNA repair protein RecN [Krokinobacter diaphorus 4H-3-7-5] gi|332169152|gb|AEE18407.1| DNA repair protein RecN [Krokinobacter diaphorus 4H-3-7-5] Length = 550 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + ++ F T++ G+ G GKS L A+ + GD+ + Sbjct: 2 LTSLSIKNY-ALIQSVQLRFDKGFTVITGETGAGKSILLGALGLITGKRADMSSAGDATQ 60 Query: 89 KRSIK 93 K ++ Sbjct: 61 KCIVE 65 >gi|319403603|emb|CBI77188.1| DNA replication and repair protein [Bartonella rochalimae ATCC BAA-1498] Length = 370 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +++ ++R + + H+ + G+NG GK++L EA+ +L G RR Sbjct: 1 MAVRQLKLENYRNYCSLVLHLLGHHV-VFTGRNGAGKTNLLEALSFLSPGRGLRR 54 >gi|299143895|ref|ZP_07036975.1| hypothetical protein HMPREF0629_00759 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518380|gb|EFI42119.1| hypothetical protein HMPREF0629_00759 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 772 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ +I + F F I+ D L ++ G N GKS++ I + YG+ + K+ Sbjct: 1 MKIKEIGLVEFGKFH-KHIIKLNDGLNLIEGPNESGKSTIFSFINGILYGFAKPSKN 56 >gi|251811185|ref|ZP_04825658.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875774|ref|ZP_06284641.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|251805313|gb|EES57970.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294799|gb|EFA87326.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] Length = 979 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|237730237|ref|ZP_04560718.1| SMC domain-containing protein [Citrobacter sp. 30_2] gi|226905776|gb|EEH91694.1| SMC domain-containing protein [Citrobacter sp. 30_2] Length = 534 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I+IS +R + ++ +E L ++ G N GKS+L EAI G + D + Sbjct: 2 IKKIKISGYRIYKQLI-LEPNSKLNLIVGGNEVGKSTLMEAIALALTGRINGKGANDELN 60 Query: 89 KRSIKTP----------MPMCMAVPRCKYQL 109 T +++P K +L Sbjct: 61 PYWFNTELVADFVERRQRGENISLPEIKIEL 91 >gi|91790852|ref|YP_551803.1| PHP-like [Polaromonas sp. JS666] gi|91700732|gb|ABE46905.1| PHP-like [Polaromonas sp. JS666] Length = 894 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 GF + Q I F+ +L + G G GKS+ EA+ G Sbjct: 282 GFLKGQSIHFSRNLNCIIGGRGTGKSTTFEAVR-CLTGS 319 >gi|118577347|ref|YP_899587.1| hypothetical protein Ppro_3743 [Pelobacter propionicus DSM 2379] gi|118504852|gb|ABL01334.1| hypothetical protein Ppro_3743 [Pelobacter propionicus DSM 2379] Length = 288 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 ++I RG + F L I+ G NG GKS++ A Sbjct: 33 VDIKSVRG----KTFRFKPGLNILVGPNGTGKSTVLRA 66 >gi|242048726|ref|XP_002462109.1| hypothetical protein SORBIDRAFT_02g019360 [Sorghum bicolor] gi|241925486|gb|EER98630.1| hypothetical protein SORBIDRAFT_02g019360 [Sorghum bicolor] Length = 1039 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + + IE H+ + GQNG GKS++ A+ F + + S+K Sbjct: 6 ISRIRLENFMCHSSLH-IELDQHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRAASLK 64 Query: 89 K 89 Sbjct: 65 D 65 >gi|223453032|gb|ACM89780.1| RecN [Cronobacter sakazakii] Length = 310 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 1 TGIDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 46 >gi|196013089|ref|XP_002116406.1| hypothetical protein TRIADDRAFT_60486 [Trichoplax adhaerens] gi|190580997|gb|EDV21076.1| hypothetical protein TRIADDRAFT_60486 [Trichoplax adhaerens] Length = 951 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 18/45 (40%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 K F + +V G NG GKSS+ A+ G IK Sbjct: 19 KFRFGPKMNLVAGPNGSGKSSIVCAVCLGLAGSPSVLGRAKQIKD 63 >gi|329733570|gb|EGG69898.1| putative nuclease sbcCD subunit C [Staphylococcus aureus subsp. aureus 21193] Length = 793 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|303232198|ref|ZP_07318901.1| DNA repair protein RecN [Veillonella atypica ACS-049-V-Sch6] gi|302513304|gb|EFL55343.1| DNA repair protein RecN [Veillonella atypica ACS-049-V-Sch6] Length = 554 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I +F E I F D +TI G+ G GKS L +A L Sbjct: 2 LTQMCIRNF-ALIEQMNISFKDGITIFTGETGAGKSILMDAFSILLGE 48 >gi|295087619|emb|CBK69142.1| ATPase involved in DNA repair [Bacteroides xylanisolvens XB1A] Length = 955 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGMVEVDFTAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|162449701|ref|YP_001612068.1| hypothetical protein sce1430 [Sorangium cellulosum 'So ce 56'] gi|161160283|emb|CAN91588.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 465 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAI 70 L + + + R F Q ++ ++ T++ G NG GK++L +A+ Sbjct: 28 VYFLSLTLENVRCFGPAQTLDLSNGEGKPRQWTVILGNNGVGKTTLLKAL 77 >gi|94971109|ref|YP_593157.1| ATP-dependent OLD family endonuclease [Candidatus Koribacter versatilis Ellin345] gi|94553159|gb|ABF43083.1| ATP-dependent endonuclease of the OLD family [Candidatus Koribacter versatilis Ellin345] Length = 566 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 +L + + +FRG ++ F+ T++ G+N GKS + EA+ + + Sbjct: 1 MQLHSVLVENFRGIR-RAEVSFSRD-TVLIGENDSGKSRVIEALCLVLNSSS 50 >gi|83591841|ref|YP_425593.1| hypothetical protein Rru_A0502 [Rhodospirillum rubrum ATCC 11170] gi|83574755|gb|ABC21306.1| hypothetical protein Rru_A0502 [Rhodospirillum rubrum ATCC 11170] Length = 1325 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 18/85 (21%) Query: 28 KLLDIEISHFRGFT----------EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL+ I+ FRG + ++E + T+ G NG GK+SL A+ W G Sbjct: 101 KLVRIDAHRFRGLHRHCAEGGIDPKPFELELSAPATLFRGFNGAGKTSLVSAVCWCLTGL 160 Query: 78 TQRRKHGDSIKKRSIKTPMPMCMAV 102 R + + P+ C+AV Sbjct: 161 GHRS--------QGLPAPLHECIAV 177 >gi|110347357|ref|YP_666173.1| SMC protein-like [Mesorhizobium sp. BNC1] gi|110287533|gb|ABG65590.1| SMC protein-like [Chelativorans sp. BNC1] Length = 671 Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 8/63 (12%) Query: 29 LLDIEISHFRGFTEIQKIEF--------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I + F + + ++ + ++ G+NG GK++L EA+ YG Sbjct: 3 LRSIRLEDFGLYAGVTDLDLVPRQRLGGPTPIILIGGKNGAGKTTLLEAVRLALYGRRAL 62 Query: 81 RKH 83 Sbjct: 63 GAR 65 >gi|228475337|ref|ZP_04060060.1| exonuclease SbcC [Staphylococcus hominis SK119] gi|314936499|ref|ZP_07843846.1| exonuclease SbcC [Staphylococcus hominis subsp. hominis C80] gi|228270649|gb|EEK12068.1| exonuclease SbcC [Staphylococcus hominis SK119] gi|313655118|gb|EFS18863.1| exonuclease SbcC [Staphylococcus hominis subsp. hominis C80] Length = 1011 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K + + + +F F + I+F D L +++G+ G GK+ + +AI + +G Sbjct: 1 MKPIKLTLHNFGPFL-HEMIDFTQIKNDQLFLISGKTGSGKTMIFDAIVFSLFGKASTEG 59 Query: 83 HGDS-IKKRSIKTPMPM 98 ++ ++ + PM Sbjct: 60 RSEAGLRSHFAEAKSPM 76 >gi|218458186|ref|ZP_03498277.1| recombination protein F [Rhizobium etli Kim 5] Length = 152 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR-KHGD 85 L ++++ FR + + ++ G NG GK++L EA+ L G RR +GD Sbjct: 7 LSRLKLTDFRNYAA-VSLALDGRHAVLTGNNGAGKTNLMEAVSLLSPGRGLRRAAYGD 63 >gi|322392005|ref|ZP_08065468.1| DNA repair protein RecN [Streptococcus peroris ATCC 700780] gi|321145103|gb|EFX40501.1| DNA repair protein RecN [Streptococcus peroris ATCC 700780] Length = 555 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG----ARATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGAAKAEIE 65 >gi|253316486|ref|ZP_04839699.1| hypothetical protein SauraC_10141 [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 793 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|242243065|ref|ZP_04797510.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] gi|242233523|gb|EES35835.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] Length = 979 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|218261829|ref|ZP_03476536.1| hypothetical protein PRABACTJOHN_02207 [Parabacteroides johnsonii DSM 18315] gi|218223748|gb|EEC96398.1| hypothetical protein PRABACTJOHN_02207 [Parabacteroides johnsonii DSM 18315] Length = 421 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I+F +++ G+ G GKS + A+ + +R G SIK Sbjct: 2 LKSLFIRNF-VLIDSLDIKFDKGFSVITGETGAGKSIILGALSLVLG----QRADGKSIK 56 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 S K + V R K + Sbjct: 57 NGSEKCVIEAVFDVSRYKLE 76 >gi|154492226|ref|ZP_02031852.1| hypothetical protein PARMER_01860 [Parabacteroides merdae ATCC 43184] gi|154087451|gb|EDN86496.1| hypothetical protein PARMER_01860 [Parabacteroides merdae ATCC 43184] Length = 554 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I+F +++ G+ G GKS + A+ + +R G SIK Sbjct: 2 LKSLFIRNF-VLIDSLDIKFDKGFSVITGETGAGKSIILGALSLVLG----QRADGKSIK 56 Query: 89 KRSIKTPMPMCMAVPRCKYQ 108 S K + V R K + Sbjct: 57 NGSEKCVIEAVFDVSRYKLE 76 >gi|75907635|ref|YP_321931.1| hypothetical protein Ava_1413 [Anabaena variabilis ATCC 29413] gi|75701360|gb|ABA21036.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 396 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 8/60 (13%) Query: 12 CLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 C+S S A K++ L I I +FRGF + + + ++ G+N GK+S+ EAI+ Sbjct: 13 CVSSS-----ASKIM--LKSIRIENFRGFHSFELQQLGR-VNLLVGKNNTGKTSILEAIQ 64 >gi|302336552|ref|YP_003801758.1| DNA replication and repair protein RecF [Spirochaeta smaragdinae DSM 11293] gi|301633737|gb|ADK79164.1| DNA replication and repair protein RecF [Spirochaeta smaragdinae DSM 11293] Length = 358 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + G+NG GKS+L EAI L +G + R + + +R Sbjct: 26 VFLVGENGQGKSNLLEAIYLLSFGSSFRTRRDQELIRRG 64 >gi|291526937|emb|CBK92523.1| ABC-type multidrug transport system, ATPase component [Eubacterium rectale M104/1] Length = 220 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I+F + + + G NG GKS++ + + + + + Sbjct: 21 SIKFENGIYGLIGPNGSGKSTIMNIMSDVLDMSSGKILY 59 >gi|228476135|ref|ZP_04060843.1| DNA repair protein RecN [Staphylococcus hominis SK119] gi|228269958|gb|EEK11438.1| DNA repair protein RecN [Staphylococcus hominis SK119] Length = 557 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + +I F+D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEIHFSDGLTVLSGETGAGKSIIIDAI 42 >gi|227510473|ref|ZP_03940522.1| DNA repair protein RecN [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190125|gb|EEI70192.1| DNA repair protein RecN [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 564 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL++ I+ F E IEF +T++ G+ G GKS + +A+ L G Sbjct: 2 LLELSITDF-AIIEHLDIEFQSGMTVLTGETGAGKSIIIDAVGLLVGG 48 >gi|227524624|ref|ZP_03954673.1| DNA repair protein RecN [Lactobacillus hilgardii ATCC 8290] gi|227088108|gb|EEI23420.1| DNA repair protein RecN [Lactobacillus hilgardii ATCC 8290] Length = 564 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL++ I+ F E IEF +T++ G+ G GKS + +A+ L G Sbjct: 2 LLELSITDF-AIIEHLDIEFQSGMTVLTGETGAGKSIIIDAVGLLVGG 48 >gi|227513482|ref|ZP_03943531.1| DNA repair protein RecN [Lactobacillus buchneri ATCC 11577] gi|227083355|gb|EEI18667.1| DNA repair protein RecN [Lactobacillus buchneri ATCC 11577] Length = 564 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL++ I+ F E IEF +T++ G+ G GKS + +A+ L G Sbjct: 2 LLELSITDF-AIIEHLDIEFQSGMTVLTGETGAGKSIIIDAVGLLVGG 48 >gi|104773357|ref|YP_618337.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422438|emb|CAI96991.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 451 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F + + I R E +++ +T++ G NG GKSSL +A+ L G Sbjct: 239 FVMKNFAIKQGRPLLEQKELSIPKGKVTLITGPNGSGKSSLFKAMTKLLDYQGSLTWKGK 298 Query: 86 SIKKRSIKT 94 + K +T Sbjct: 299 EVAKLKERT 307 >gi|54027231|ref|YP_121473.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] gi|54018739|dbj|BAD60109.1| putative ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152] Length = 292 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-- 74 +TS Y L + L + F+ T++ L + G NG GK++L +AI L Sbjct: 24 MTSEY---LEIRGLSVSFDGFKAVTDVDLTVLQGDLRFLIGPNGAGKTTLIDAITGLVPA 80 Query: 75 YGYTQRRK 82 G Q+ Sbjct: 81 TGSAQKSG 88 >gi|323137241|ref|ZP_08072320.1| DNA replication and repair protein RecF [Methylocystis sp. ATCC 49242] gi|322397599|gb|EFY00122.1| DNA replication and repair protein RecF [Methylocystis sp. ATCC 49242] Length = 391 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + + +S FR + + + L ++G+NG GK+++ EA+ G RR Sbjct: 26 VRRLTLSDFRSYA-QARCDIEARLVALSGENGAGKTNVLEALSMFSPGRGLRR 77 >gi|320010764|gb|ADW05614.1| ABC transporter related protein [Streptomyces flavogriseus ATCC 33331] Length = 554 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ + + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 322 VEVENLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGAIKVG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|70606001|ref|YP_254871.1| hypothetical protein Saci_0157 [Sulfolobus acidocaldarius DSM 639] gi|68566649|gb|AAY79578.1| conserved protein [Sulfolobus acidocaldarius DSM 639] Length = 495 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL++ +++FR + ++ L I+ G NGYGK++L AI +LF + Sbjct: 1 MKLIEFYVNNFRSISSVKLTGLG-GLNIIVGYNGYGKTNLLTAI-YLFIKNLGAGLEKRN 58 Query: 87 IKKRSIK 93 I+ R+ + Sbjct: 59 IEDRNGE 65 >gi|52144393|ref|YP_082436.1| ATPase involved in DNA repair [Bacillus cereus E33L] gi|228930921|ref|ZP_04093883.1| ATPase involved in DNA repair [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|51977862|gb|AAU19412.1| possible ATPase involved in DNA repair [Bacillus cereus E33L] gi|228828735|gb|EEM74409.1| ATPase involved in DNA repair [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 663 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIE---WLFYGYT 78 + +E+ + +TE + + + ++ G+NG GK++ +I+ + +GY Sbjct: 1 MLIEQLELENIGAYTERNTFDLSISSPKKKVILIGGENGAGKTTFLNSIKLGLFGCFGYG 60 Query: 79 QRRKHGDSIKK 89 + ++ D K+ Sbjct: 61 YKTENNDYYKR 71 >gi|315644963|ref|ZP_07898091.1| AAA ATPase [Paenibacillus vortex V453] gi|315279674|gb|EFU42976.1| AAA ATPase [Paenibacillus vortex V453] Length = 184 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++F +T + G+NG GKS+L EAI Sbjct: 39 LDFHPKVTYIVGENGMGKSTLLEAIATALG 68 >gi|197116405|ref|YP_002136832.1| DNA replication/repair protein RecF [Geobacter bemidjiensis Bem] gi|226737801|sp|B5E7P8|RECF_GEOBB RecName: Full=DNA replication and repair protein recF gi|197085765|gb|ACH37036.1| DNA replication and repair protein RecF [Geobacter bemidjiensis Bem] Length = 364 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 KL+ ++++ FR Q IE A + G NG GK++L E+I L + ++ Sbjct: 1 MKLIKLKLASFRNL---QNIELAPGKKFNVFYGNNGQGKTNLLESIYLLATMKSFKQARN 57 Query: 85 DSIK 88 + Sbjct: 58 AELI 61 >gi|75675058|ref|YP_317479.1| hypothetical protein Nwi_0863 [Nitrobacter winogradskyi Nb-255] gi|74419928|gb|ABA04127.1| hypothetical protein Nwi_0863 [Nitrobacter winogradskyi Nb-255] Length = 223 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I+I +FR + + + G GKSS+ +AI++ +R Sbjct: 3 RIRIIDIRNFRCLKSFI-WRPSGGINCLIGPGDAGKSSVLDAIDYCLG--ARRNLSFSDA 59 Query: 88 KKRSIKTPMPMCMAV 102 + P+ ++V Sbjct: 60 DFHGLDVSAPISISV 74 >gi|75910561|ref|YP_324857.1| ABC transporter-like protein [Anabaena variabilis ATCC 29413] gi|75704286|gb|ABA23962.1| urea ABC transporter ATP-binding protein [Anabaena variabilis ATCC 29413] Length = 246 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 17/95 (17%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I + ++ +S F GF + ++ F+ L +V G NG GK++ + I L Sbjct: 5 ILETENVTVS-FDGFKALNQLNFSMDVGELRVVIGPNGAGKTTFLDVITGKVQPTIGRVL 63 Query: 74 FYGYTQRRKHGDSIKKRSI----KTPMPMCMAVPR 104 F G R I +R I +TP PR Sbjct: 64 FKGKNLRSLREHQIARRGIGRKFQTPRVYLNLTPR 98 >gi|17229440|ref|NP_485988.1| ATP-binding protein of ABC transporter [Nostoc sp. PCC 7120] gi|17131038|dbj|BAB73647.1| ATP-binding protein of ABC transporter [Nostoc sp. PCC 7120] Length = 246 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 17/95 (17%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I + ++ +S F GF + ++ F+ L +V G NG GK++ + I L Sbjct: 5 ILETENVTVS-FDGFKALNQLNFSMDVGELRVVIGPNGAGKTTFLDVITGKVQPTIGRVL 63 Query: 74 FYGYTQRRKHGDSIKKRSI----KTPMPMCMAVPR 104 F G R I +R I +TP PR Sbjct: 64 FKGKNLRSLREHQIARRGIGRKFQTPRVYLNLTPR 98 >gi|332296672|ref|YP_004438594.1| DNA replication and repair protein recF [Treponema brennaborense DSM 12168] gi|332179775|gb|AEE15463.1| DNA replication and repair protein recF [Treponema brennaborense DSM 12168] Length = 362 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + ++FR + KI+ G+NG GKS+L EA+ + Y + R + Sbjct: 1 MPFLSLSCTNFRNL-KNDKIDLLSKEVYFVGENGQGKSNLLEALYYASYASSFRTHNEQE 59 Query: 87 IKKRSIK 93 + + K Sbjct: 60 LVRYDEK 66 >gi|284108602|ref|ZP_06386420.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] gi|283829882|gb|EFC34171.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] Length = 369 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 L + I F+ +++ EF L ++ G NG GKS+L Sbjct: 5 LNRLTIRGFKSIRQLEDFEFK-SLNVLIGANGGGKSNLI 42 >gi|269104453|ref|ZP_06157149.1| hypothetical ATP-dependent endonuclease of the OLD family [Photobacterium damselae subsp. damselae CIP 102761] gi|268161093|gb|EEZ39590.1| hypothetical ATP-dependent endonuclease of the OLD family [Photobacterium damselae subsp. damselae CIP 102761] Length = 566 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEIS FRG + + F D L+++ G+N +GKSSL +A+ Sbjct: 1 MHLERIEISGFRGI-KRLSLTF-DELSVLIGENAWGKSSLLDALSIAL 46 >gi|262403587|ref|ZP_06080145.1| ATP-dependent endonuclease [Vibrio sp. RC586] gi|262350091|gb|EEY99226.1| ATP-dependent endonuclease [Vibrio sp. RC586] Length = 543 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVAL 46 >gi|237715938|ref|ZP_04546419.1| ATP-dependent exonuclease sbcC [Bacteroides sp. D1] gi|262407549|ref|ZP_06084097.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646790|ref|ZP_06724411.1| exonuclease SbcCD, C subunit [Bacteroides ovatus SD CC 2a] gi|294806083|ref|ZP_06764938.1| exonuclease SbcCD, C subunit [Bacteroides xylanisolvens SD CC 1b] gi|229443585|gb|EEO49376.1| ATP-dependent exonuclease sbcC [Bacteroides sp. D1] gi|262354357|gb|EEZ03449.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292637735|gb|EFF56132.1| exonuclease SbcCD, C subunit [Bacteroides ovatus SD CC 2a] gi|294446722|gb|EFG15334.1| exonuclease SbcCD, C subunit [Bacteroides xylanisolvens SD CC 1b] Length = 955 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L I + + + +++F + + ++G G GKS+L +A+ Y R Sbjct: 1 MKILAIRLKNLTSIEGMVEVDFTAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 >gi|289207190|ref|YP_003459256.1| DNA replication and repair protein RecF [Thioalkalivibrio sp. K90mix] gi|288942821|gb|ADC70520.1| DNA replication and repair protein RecF [Thioalkalivibrio sp. K90mix] Length = 357 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + R +E Q E + + + G NG GK+S+ EA L G + R + Sbjct: 2 LEGLWWRGVRNLSE-QTFEPGEGINRLVGPNGAGKTSVLEACHVLAAGRSFRTPQLRRVV 60 Query: 89 KRSIK 93 + K Sbjct: 61 RSGEK 65 >gi|163761690|ref|ZP_02168759.1| molybdate ABC transporter, ATP-binding protein [Hoeflea phototrophica DFL-43] gi|162281113|gb|EDQ31415.1| molybdate ABC transporter, ATP-binding protein [Hoeflea phototrophica DFL-43] Length = 362 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 31 DIEISH-FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + I+H F GF E +T + G++G GK+++ AI L + + D + Sbjct: 4 SVRIAHDFGGFALDVNFEAPSGVTALFGRSGSGKTTVINAIAGLLRPQSGQISLDDQVLF 63 >gi|120610526|ref|YP_970204.1| ATPase-like protein [Acidovorax citrulli AAC00-1] gi|120588990|gb|ABM32430.1| ATPase-like protein [Acidovorax citrulli AAC00-1] Length = 409 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 KL +E H E ++ + +T++ G N GK++ +E+L Sbjct: 1 MKLTRVEARHCFSL-EDVGVDLSPGVTVLVGPNATGKTNFVRTLEFL 46 >gi|52425445|ref|YP_088582.1| hypothetical protein MS1390 [Mannheimia succiniciproducens MBEL55E] gi|52307497|gb|AAU37997.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 610 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +E LT + G NG GK+ L + ++ F G+T+++ Sbjct: 22 LELRSALTFIVGPNGSGKTHLLKGLKESFSGFTEKKVR 59 >gi|116193581|ref|XP_001222603.1| hypothetical protein CHGG_06508 [Chaetomium globosum CBS 148.51] gi|88182421|gb|EAQ89889.1| hypothetical protein CHGG_06508 [Chaetomium globosum CBS 148.51] Length = 1069 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +++ +F + E + +L +V G NG GKSSL AI Sbjct: 92 IVRVKVENFVTY-EEAEFFLGPNLNMVIGPNGTGKSSLVCAI 132 >gi|84686349|ref|ZP_01014243.1| DNA repair protein RecN [Maritimibacter alkaliphilus HTCC2654] gi|84665532|gb|EAQ12008.1| DNA repair protein RecN [Rhodobacterales bacterium HTCC2654] Length = 550 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMA 101 + ++EF L ++ G+ G GKS L +++ ++ R D +++ + + + A Sbjct: 14 DRLELEFRPGLNVLTGETGAGKSILLDSLGFVLGW----RGRADLVRQGADEGEVTAVFA 69 Query: 102 VP 103 +P Sbjct: 70 LP 71 >gi|256422513|ref|YP_003123166.1| ATP-dependent endonuclease of the OLD family-like protein [Chitinophaga pinensis DSM 2588] gi|256037421|gb|ACU60965.1| ATP-dependent endonuclease of the OLD family-like protein [Chitinophaga pinensis DSM 2588] Length = 582 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE--WLFYGYTQRRKHG 84 L +I I +FR + I F + I+ G+N GK+++ +AI + Y + + K Sbjct: 3 LEEISIQNFRSIKDET-ITFPHNCLILLGKNEAGKTNVLKAIAALFNLYKVSGKDKRK 59 >gi|254435019|ref|ZP_05048526.1| hypothetical protein NOC27_2082 [Nitrosococcus oceani AFC27] gi|207088130|gb|EDZ65402.1| hypothetical protein NOC27_2082 [Nitrosococcus oceani AFC27] Length = 1064 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR----RKHGDSIKKRS 91 +D + + G G GK+++ +AI YG T R K G+ I R Sbjct: 2 SDGIFAITGPTGAGKTTILDAICMALYGRTPRLNKVTKRGNEIMSRQ 48 >gi|163816420|ref|ZP_02207784.1| hypothetical protein COPEUT_02609 [Coprococcus eutactus ATCC 27759] gi|158448120|gb|EDP25115.1| hypothetical protein COPEUT_02609 [Coprococcus eutactus ATCC 27759] Length = 752 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ I F G +I+F D L +NG+GKS+ + + +FYG+ K + Sbjct: 1 MRLISCYIEGF-GKLRKLEIKFEDGLNCFVKENGWGKSTFAAFLRVMFYGFEGETKRNEF 59 Query: 87 IKKRSIKTP 95 +R P Sbjct: 60 ENERKYYRP 68 >gi|27379819|ref|NP_771348.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352972|dbj|BAC49973.1| bll4708 [Bradyrhizobium japonicum USDA 110] Length = 255 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 F + ++ F +TI+ G+NG GKS++ E I GY + Sbjct: 39 FPDDFELSFDAAITIIVGENGTGKSTILEGIA-ALAGYDDAGGGKGYM 85 >gi|86131758|ref|ZP_01050355.1| DNA repair protein RecN [Dokdonia donghaensis MED134] gi|85817580|gb|EAQ38754.1| DNA repair protein RecN [Dokdonia donghaensis MED134] Length = 550 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I ++ + +++F T++ G+ G GKS L A+ + GD+ + Sbjct: 2 LTSLSIKNY-ALIQSVQLQFDKGFTVITGETGAGKSILLGALGLITGKRADMSSAGDASQ 60 Query: 89 KRSIK 93 K ++ Sbjct: 61 KCVVE 65 >gi|301300707|ref|ZP_07206893.1| conserved domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851712|gb|EFK79410.1| conserved domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 247 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 27 FKLLDIEISHFRGFTEIQK--IEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K L + + +F + + EF + L +++G+ G GK+++ +A+ + + +T + Sbjct: 1 MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER 60 Query: 84 GDSIKKRSIKTP 95 + TP Sbjct: 61 DAKQMRSDFATP 72 >gi|294777973|ref|ZP_06743408.1| putative DNA sulfur modification protein DndD [Bacteroides vulgatus PC510] gi|294448182|gb|EFG16747.1| putative DNA sulfur modification protein DndD [Bacteroides vulgatus PC510] Length = 666 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+IS+F+ + + + ++ G NG GK++L EAI YG K Sbjct: 1 MLIQRIKISNFKTYLSLDLDLTVDDDRPIILIGGSNGGGKTTLFEAISGALYGLKIESK 59 >gi|291545453|emb|CBL18561.1| DNA replication and repair protein RecN [Ruminococcus sp. SR1/5] Length = 403 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + + + E ++EF L I+ G+ G GKS L +I+ + G T R Sbjct: 2 LVHLHVKNL-ALIEESEVEFGPGLNILTGETGAGKSILLGSIQLILGGKTSRSM 54 >gi|259046422|ref|ZP_05736823.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259036967|gb|EEW38222.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 809 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + IEI HF G E + F +L +V G N GK+++ IE + + + Q++ Sbjct: 1 MYISKIEIDHF-GKWEHETFTFHPNLQVVQGLNESGKTTIRRFIEQMLFDFKQKK 54 >gi|256005229|ref|ZP_05430196.1| ATPase-like protein [Clostridium thermocellum DSM 2360] gi|255990780|gb|EEU00895.1| ATPase-like protein [Clostridium thermocellum DSM 2360] Length = 388 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 16/64 (25%) Query: 29 LLDIEISHFRGFTEIQKIEF-------------ADHL---TIVNGQNGYGKSSLSEAIEW 72 L I + +F+ F I+F + + G N GKS++ AI + Sbjct: 2 LAKIIMKNFKSFKNETVIDFTRINYKFLENNVSNNGVLKGVAFYGANASGKSNVLWAIRF 61 Query: 73 LFYG 76 L Sbjct: 62 LLDE 65 >gi|229543907|ref|ZP_04432966.1| DNA repair protein RecN [Bacillus coagulans 36D1] gi|229325046|gb|EEN90722.1| DNA repair protein RecN [Bacillus coagulans 36D1] Length = 567 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F + + F LT++ G+ G GKS + +AI+ L G Sbjct: 2 LQELSIKNF-AIIDALTLSFEAGLTVLTGETGAGKSIIIDAIQLLTGG 48 >gi|78060542|ref|YP_367117.1| ABC efflux pump, ATPase subunit [Burkholderia sp. 383] gi|77965092|gb|ABB06473.1| ABC efflux pump, ATPase subunit [Burkholderia sp. 383] Length = 337 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + +D+ FR + +T + G NG GK++L E + G T R Sbjct: 43 RAIDVAAGDFRFSARHVRFRLG-AITAIVGPNGSGKTTLLETLLGFRRGGTDVRVLDVPA 101 Query: 88 KKRSIKTP 95 + TP Sbjct: 102 TRFMRDTP 109 >gi|117924586|ref|YP_865203.1| hypothetical protein Mmc1_1286 [Magnetococcus sp. MC-1] gi|117608342|gb|ABK43797.1| hypothetical protein Mmc1_1286 [Magnetococcus sp. MC-1] Length = 633 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 19/37 (51%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 GF E K+EF L V G G GK+++ E I + Sbjct: 24 GFLEGGKLEFLPGLNCVIGGRGTGKTTILEFIRYTLG 60 >gi|117925997|ref|YP_866614.1| hypothetical protein Mmc1_2715 [Magnetococcus sp. MC-1] gi|117609753|gb|ABK45208.1| hypothetical protein Mmc1_2715 [Magnetococcus sp. MC-1] Length = 633 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 19/37 (51%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 GF E K+EF L V G G GK+++ E I + Sbjct: 24 GFLEGGKLEFLPGLNCVIGGRGTGKTTILEFIRYTLG 60 >gi|117924658|ref|YP_865275.1| hypothetical protein Mmc1_1358 [Magnetococcus sp. MC-1] gi|117608414|gb|ABK43869.1| hypothetical protein Mmc1_1358 [Magnetococcus sp. MC-1] Length = 633 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 19/37 (51%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 GF E K+EF L V G G GK+++ E I + Sbjct: 24 GFLEGGKLEFLPGLNCVIGGRGTGKTTILEFIRYTLG 60 >gi|288924856|ref|ZP_06418793.1| RecF protein [Prevotella buccae D17] gi|288338643|gb|EFC76992.1| RecF protein [Prevotella buccae D17] Length = 372 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + I +++ + ++ + + + G NG GK++ +A+ +L + + Sbjct: 1 MVLRKLSIVNYKNIR-VANVDLSPKMNCLIGHNGVGKTNFLDAVYYLSFCRSA 52 >gi|209885961|ref|YP_002289818.1| iron(III) dicitrate transport ATP-binding protein FecE [Oligotropha carboxidovorans OM5] gi|209874157|gb|ACI93953.1| iron(III) dicitrate transport ATP-binding protein FecE [Oligotropha carboxidovorans OM5] Length = 262 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 +T + G NG GK++L AI L HG ++ + +P+ Sbjct: 36 QVTALVGPNGAGKTTLLRAIAGLLRASGSALVHGKNLLTMGYGERSALVSYMPQ 89 >gi|33355825|gb|AAQ16246.1| unknown [Enterococcus faecalis] Length = 263 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K + I +FR F + +++ ++ I G N GK++ A+ ++F ++ Sbjct: 8 MKFEKVVIKNFRNF-DNVELDLSNK-NIFFGLNDVGKTNFLYALRYVFDKDIRKQNLLDS 65 Query: 86 SIKKRSIKTPMPMCMAV 102 + + P+ + + + Sbjct: 66 DFHNKQLDKPIEIVVTI 82 >gi|46201752|ref|ZP_00054423.2| COG3910: Predicted ATPase [Magnetospirillum magnetotacticum MS-1] Length = 208 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++F +TI+ G+NG GKS+L E I Sbjct: 41 LDFGSAITILVGENGSGKSTLIEGIASCAG 70 >gi|323140949|ref|ZP_08075861.1| DNA repair protein RecN [Phascolarctobacterium sp. YIT 12067] gi|322414552|gb|EFY05359.1| DNA repair protein RecN [Phascolarctobacterium sp. YIT 12067] Length = 566 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F E +F + G+ G GKS L +A + G + Sbjct: 2 LQSLHVHNF-ALLEDAHADFTPGFNVFTGETGAGKSILIDAFGMVLGGRS 50 >gi|218459881|ref|ZP_03499972.1| hypothetical protein RetlK5_10429 [Rhizobium etli Kim 5] Length = 229 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 F + I+ G+NG GKS++++ I + G R D+ + S Sbjct: 24 FHRGVNIIRGENGSGKSTIADFIFYGLGGEFDR--WKDAAQNCS 65 >gi|260904133|ref|ZP_05912455.1| hypothetical protein BlinB_02302 [Brevibacterium linens BL2] Length = 1124 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 28 KLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +L +I+I+++ F +I +I + ++ G +G GKSSL + I + Sbjct: 32 RLSEIQIANWGTFDADIHRIPVSHKGHLITGPSGSGKSSLLDGIAAVLT 80 >gi|134298736|ref|YP_001112232.1| ATP-dependent OLD family endonuclease [Desulfotomaculum reducens MI-1] gi|134051436|gb|ABO49407.1| ATP-dependent endonuclease of the OLD family-like protein [Desulfotomaculum reducens MI-1] Length = 591 Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL +EI +FR E +I + + + G N YGKSS+ AI+ L Sbjct: 1 MKLSKVEIKNFRR-VEHAEINLSPA-SFIIGPNNYGKSSILRAIDALL 46 >gi|311032425|ref|ZP_07710515.1| hypothetical protein Bm3-1_18108 [Bacillus sp. m3-13] Length = 386 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 28/58 (48%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ + I F + + + ++ ++ G+N GKS++ I+ + +G+ + + Sbjct: 1 MKITSLHIYGFGKLENVVIEDLSPNIQVIYGENEAGKSTVMAFIQAILFGFPAKNQQD 58 >gi|258515773|ref|YP_003191995.1| DNA repair protein RecN [Desulfotomaculum acetoxidans DSM 771] gi|257779478|gb|ACV63372.1| DNA repair protein RecN [Desulfotomaculum acetoxidans DSM 771] Length = 562 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L+ + + +F G E +EF L ++ G+ G GKS + +A+ G Sbjct: 2 LITLTVQNF-GIIENLLMEFDRGLNVLTGETGAGKSIVLDALSAALGG 48 >gi|291286739|ref|YP_003503555.1| ABC transporter related protein [Denitrovibrio acetiphilus DSM 12809] gi|290883899|gb|ADD67599.1| ABC transporter related protein [Denitrovibrio acetiphilus DSM 12809] Length = 258 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 38 RGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 + + I F ++T V G NG GKS+L + + L ++ + D + Sbjct: 16 KPIIKNISISFGQSNITSVIGPNGSGKSTLLKTMGRLIKPFSGKVYINDKTIDSYSAQEI 75 Query: 97 PMCMAV 102 M + Sbjct: 76 ACNMGI 81 >gi|255505613|ref|ZP_05347185.3| putative RecF protein [Bryantella formatexigens DSM 14469] gi|255266923|gb|EET60128.1| putative RecF protein [Bryantella formatexigens DSM 14469] Length = 445 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 16/110 (14%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 M R+++K C + K+ + I F+ + KI F D +T + N Sbjct: 6 MIRIQRKKGC--------------MDMKIQAVLIDGFKNLS-NVKISF-DKITALVALNN 49 Query: 61 YGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKYQLK 110 +GKS++ AI++ + + + P+ CM K++++ Sbjct: 50 FGKSNVLAAIDFGLAFMKAAIEDKADMMANANLIPINCCMFGRNYKFEME 99 >gi|323497205|ref|ZP_08102225.1| ATP-dependent endonuclease [Vibrio sinaloensis DSM 21326] gi|323317780|gb|EGA70771.1| ATP-dependent endonuclease [Vibrio sinaloensis DSM 21326] Length = 542 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MLLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|326779295|ref|ZP_08238560.1| ATP-binding cassette protein, ChvD family [Streptomyces cf. griseus XylebKG-1] gi|326659628|gb|EGE44474.1| ATP-binding cassette protein, ChvD family [Streptomyces cf. griseus XylebKG-1] Length = 554 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ H + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 322 VEVEHLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGSVKIG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|260777651|ref|ZP_05886544.1| ATP-dependent endonuclease [Vibrio coralliilyticus ATCC BAA-450] gi|260605664|gb|EEX31949.1| ATP-dependent endonuclease [Vibrio coralliilyticus ATCC BAA-450] Length = 543 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEIS FRG + I F D LT + G+N +GKSSL +A+ Sbjct: 1 MLLERIEISGFRGI-KRLSIAF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|227552656|ref|ZP_03982705.1| conserved hypothetical protein [Enterococcus faecium TX1330] gi|257896992|ref|ZP_05676645.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293378654|ref|ZP_06624813.1| conserved hypothetical protein [Enterococcus faecium PC4.1] gi|227178282|gb|EEI59254.1| conserved hypothetical protein [Enterococcus faecium TX1330] gi|257833557|gb|EEV59978.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|292642694|gb|EFF60845.1| conserved hypothetical protein [Enterococcus faecium PC4.1] Length = 906 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPIYGEFAVERYKQQ 90 >gi|182438646|ref|YP_001826365.1| putative ABC transporter ATP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467162|dbj|BAG21682.1| putative ABC transporter ATP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 547 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ H + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 315 VEVEHLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGSVKIG 374 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 375 DTVKISYVDQSR 386 >gi|169334429|ref|ZP_02861622.1| hypothetical protein ANASTE_00829 [Anaerofustis stercorihominis DSM 17244] gi|169259146|gb|EDS73112.1| hypothetical protein ANASTE_00829 [Anaerofustis stercorihominis DSM 17244] Length = 565 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 LL + I+++ + I+F + L I+ G+ G GKS + A+ + + Sbjct: 2 LLSLNINNY-AIIDKLSIDFDEGLNIITGETGAGKSIIIGALSLVLGEHA 50 >gi|153829654|ref|ZP_01982321.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148874882|gb|EDL73017.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 565 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGY----TQRR 81 + + I+++R F E LT+V G+N GK++ A+ G Q+R Sbjct: 1 MYIRKVTINNYRSFR---TFEAKLQQLTVVIGENDTGKTNFFTALSLPLSGNLIDFNQKR 57 Query: 82 KHGDSIKKRSI 92 I K S+ Sbjct: 58 LSVSDINKDSV 68 >gi|146328663|ref|YP_001209950.1| DNA repair protein RecN [Dichelobacter nodosus VCS1703A] gi|146232133|gb|ABQ13111.1| DNA repair protein RecN [Dichelobacter nodosus VCS1703A] Length = 552 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR---RKHGD 85 L + I F + +I F +++G+ G GKS L +AI L Q R H D Sbjct: 2 LNRLCIQQF-ALIDYSEIAFGAGFNVISGETGAGKSILIDAIALLLGERAQAAMIRPHAD 60 Query: 86 SIKKRSIKTPMP 97 + + + +P Sbjct: 61 TAEICAQFDALP 72 >gi|125623964|ref|YP_001032447.1| nuclease sbcCD subunit C [Lactococcus lactis subsp. cremoris MG1363] gi|124492772|emb|CAL97727.1| nuclease sbcCD subunit C [Lactococcus lactis subsp. cremoris MG1363] gi|300070737|gb|ADJ60137.1| nuclease sbcCD subunit C [Lactococcus lactis subsp. cremoris NZ9000] Length = 1046 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 32 IEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +E+++F E ++F + +++G G GKS++ +A+ + +G T Sbjct: 6 LEMNYFGPH-EKSIVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTT-GDRDAKE 63 Query: 88 KKRSIKTPMPMCMAV 102 + TP + V Sbjct: 64 MRSQFATPDNLTSVV 78 >gi|34496942|ref|NP_901157.1| iron transport system ATP-binding protein [Chromobacterium violaceum ATCC 12472] gi|34102798|gb|AAQ59162.1| probable iron transport system ATP-binding protein [Chromobacterium violaceum ATCC 12472] Length = 255 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 +T + G NG GKS+L A+ L G R G + ++ Sbjct: 33 VTALLGPNGSGKSTLLRALAGLQGGDGLVRLRGRPLSRQ 71 >gi|257888117|ref|ZP_05667770.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257824171|gb|EEV51103.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] Length = 906 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPIYGEFAVERYKQQ 90 >gi|168485681|ref|ZP_02710189.1| conserved hypothetical protein [Streptococcus pneumoniae CDC1087-00] gi|183571126|gb|EDT91654.1| conserved hypothetical protein [Streptococcus pneumoniae CDC1087-00] Length = 610 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 24/43 (55%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I H++ + +I F +T++ G+NG K+S+ +A+ Sbjct: 26 YIDYIRFPHYKSLSLNSRINFNFPITLLVGRNGVNKTSILQAL 68 >gi|154250461|ref|YP_001411285.1| DNA replication and repair protein RecF [Parvibaculum lavamentivorans DS-1] gi|154154411|gb|ABS61628.1| DNA replication and repair protein RecF [Parvibaculum lavamentivorans DS-1] Length = 412 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +L + ++ FR + ++ ++ G+NG GK++L EA+ L G R G Sbjct: 34 RLSRLVVTDFRSYA-RAELALDGRPVVLTGENGAGKTNLLEAVSLLSPG---RGLRG 86 >gi|50308365|ref|XP_454184.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643319|emb|CAG99271.1| KLLA0E05303p [Kluyveromyces lactis] Length = 1098 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +I++++F + + L + G NG GKS++ AI G S+K Sbjct: 64 IKEIKLTNFMCHS-NFSLRLGPRLNFIVGNNGSGKSAILTAITIGLGAKATTTNRGTSLK 122 Query: 89 KR 90 Sbjct: 123 DL 124 >gi|327394501|dbj|BAK11923.1| ferric enterobactin transport ATP-binding protein FepC [Pantoea ananatis AJ13355] Length = 263 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 +T++ G NG GKS+L A+ L G + +G+ + + + +P+ Sbjct: 34 ITVLLGPNGCGKSTLLRALAGLNKGQGELWLNGEDLMTQPFAQRARQVVYLPQ 86 >gi|306829636|ref|ZP_07462826.1| DNA repair protein RecN [Streptococcus mitis ATCC 6249] gi|304428722|gb|EFM31812.1| DNA repair protein RecN [Streptococcus mitis ATCC 6249] Length = 555 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLGARAA 51 >gi|302389859|ref|YP_003825680.1| DNA repair protein RecN [Thermosediminibacter oceani DSM 16646] gi|302200487|gb|ADL08057.1| DNA repair protein RecN [Thermosediminibacter oceani DSM 16646] Length = 576 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL + I F + +I+F L I+ G+ G GKS + +AI + Sbjct: 2 LLKLIIKDF-ALIDDIEIDFKRGLNILTGETGAGKSIIIDAIGMILGE 48 >gi|291618102|ref|YP_003520844.1| FepC [Pantoea ananatis LMG 20103] gi|291153132|gb|ADD77716.1| FepC [Pantoea ananatis LMG 20103] Length = 263 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 +T++ G NG GKS+L A+ L G + +G+ + + + +P+ Sbjct: 34 ITVLLGPNGCGKSTLLRALAGLNKGQGELWLNGEDLMTQPFAQRARQVVYLPQ 86 >gi|187734837|ref|YP_001876949.1| hypothetical protein Amuc_0328 [Akkermansia muciniphila ATCC BAA-835] gi|187424889|gb|ACD04168.1| hypothetical protein Amuc_0328 [Akkermansia muciniphila ATCC BAA-835] Length = 671 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 29 LLDIEISHFRGFTE--IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 LL I I ++ + +F + +V G NG GK++ I + G ++ Sbjct: 10 LLSINIKNYTLYPNGLDYTFDFVKGVNLVLGGNGMGKTTFVNIIRYAILGLYKK 63 >gi|89073526|ref|ZP_01160049.1| Putative zinc ABC transporter, ATP-binding protein [Photobacterium sp. SKA34] gi|89050790|gb|EAR56271.1| Putative zinc ABC transporter, ATP-binding protein [Photobacterium sp. SKA34] Length = 254 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 26 IFKLLDIEIS-HFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +L I +S R + ++ +T + G NG GKS+L + I L + Sbjct: 4 LIELQSITVSFGERDVLDNITLKLERGEITTLIGPNGAGKSTLVKVITGLSKATKGKVVR 63 Query: 84 GDSIKKRSIKTPMPMCMAVP 103 I+ + + + +P Sbjct: 64 KKGIRIGYVPQKLRLNNTLP 83 >gi|315126871|ref|YP_004068874.1| DNA repair protein recN [Pseudoalteromonas sp. SM9913] gi|315015385|gb|ADT68723.1| DNA repair protein recN [Pseudoalteromonas sp. SM9913] Length = 557 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L+ +EI +F E+ +T + G+ G GKS +A+ + Sbjct: 2 LIGLEIKNF-AIVSNLSTEWHSGMTAITGETGAGKSIAIDALSLCLGERAEAS 53 >gi|297183138|gb|ADI19281.1| ATPase involved in DNA repair [uncultured delta proteobacterium HF0200_39L23] Length = 564 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+ ++I +F E++ ++F +I+ G+ G GKS L +AI L R ++ Sbjct: 2 LIHLKIRNFATIKELE-VDFGPGFSILTGETGAGKSILIDAIMLLRGE----RGRTSLVR 56 Query: 89 KRSIKTPMPMCMAVPRCK 106 ++ + +++ R + Sbjct: 57 SGEDQSEVEAVLSLERAE 74 >gi|262369109|ref|ZP_06062438.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046] gi|262316787|gb|EEY97825.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046] Length = 1198 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L I I + + I+F L + G+ G GKS++ +A+ + R Sbjct: 1 MNILSIRIKNLASLSGEHLIDFESDPLASAGLIAIVGKTGAGKSTILDAMCLALFNRIPR 60 Query: 81 RKHGD 85 K D Sbjct: 61 LKDSD 65 >gi|284036606|ref|YP_003386536.1| SMC domain protein [Spirosoma linguale DSM 74] gi|283815899|gb|ADB37737.1| SMC domain protein [Spirosoma linguale DSM 74] Length = 378 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + + +F+ F E ++FA +T++ G N GKSSL AI + Sbjct: 1 MLINSLSLKNFKCF-EELDVKFAP-ITLLTGANSSGKSSLINAILAVL 46 >gi|254477838|ref|ZP_05091223.1| hemin import ATP-binding protein HmuV [Ruegeria sp. R11] gi|214028423|gb|EEB69259.1| hemin import ATP-binding protein HmuV [Ruegeria sp. R11] Length = 260 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 LT + G NG GKS+L AI + +G I+ P +A R Sbjct: 30 LTAIVGPNGSGKSTLLGAITATLPYTGRVTLNG-----CDIQQQKPWQLAAQR 77 >gi|167765194|ref|ZP_02437307.1| hypothetical protein BACSTE_03580 [Bacteroides stercoris ATCC 43183] gi|167696822|gb|EDS13401.1| hypothetical protein BACSTE_03580 [Bacteroides stercoris ATCC 43183] Length = 378 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EQVELAFSPKLNTFFGQNGMGKTNLLDAVYFLSFCKSA 52 >gi|156083559|ref|XP_001609263.1| hypothetical protein [Babesia bovis T2Bo] gi|154796514|gb|EDO05695.1| hypothetical protein BBOV_IV000970 [Babesia bovis] Length = 171 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K++ +++ +F E + + +L ++ G NG GKS++ + + F GY ++ Sbjct: 32 KVIRVQLVNFLNH-ENLVVNCSPYLNMIFGMNGQGKSAIVQGMALCFGGYGHSAGRDTAL 90 >gi|91088617|ref|XP_974026.1| PREDICTED: similar to SMC2 protein [Tribolium castaneum] Length = 1156 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 D + G NG GKS++ ++I ++ +++ K+ Sbjct: 12 NDGFNAITGLNGSGKSNILDSICFVLGISNLSHVRVGNLQDLIYKS 57 >gi|75908427|ref|YP_322723.1| hypothetical protein Ava_2210 [Anabaena variabilis ATCC 29413] gi|75702152|gb|ABA21828.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 662 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 13/81 (16%) Query: 30 LDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR- 81 L++ + +F + Q I + ++ G NG GK++L ++I YG + Sbjct: 4 LELVLQNFGPYVGRQVINLDPRTEDNPHPIILLGGMNGGGKTTLMDSIRLALYGQRAQCS 63 Query: 82 -----KHGDSIKKRSIKTPMP 97 +GD + + P Sbjct: 64 TRGNLSYGDFLTQCVNSQANP 84 >gi|117926509|ref|YP_867126.1| hypothetical protein Mmc1_3230 [Magnetococcus sp. MC-1] gi|117610265|gb|ABK45720.1| hypothetical protein Mmc1_3230 [Magnetococcus sp. MC-1] Length = 113 Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L + + H+R F +++ I+ + + ++ G NG GKSS+ E + T R Sbjct: 22 MRLTRVTLEHYRRFKQLE-IQLGNAPIVVLIGNNGAGKSSILEGVAKGLSWLTAR 75 >gi|298369283|ref|ZP_06980601.1| ferrichrome transport ATP-binding protein FhuC [Neisseria sp. oral taxon 014 str. F0314] gi|298283286|gb|EFI24773.1| ferrichrome transport ATP-binding protein FhuC [Neisseria sp. oral taxon 014 str. F0314] Length = 248 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 19 SYYARKLIFKLLDI--EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 S+ A + +F++ ++ I + EI ++ T V G NG GKS+L A+ Sbjct: 4 SFIAMQPVFRIRNLSVRIKG-KTLLEIDALDIPAGSTAVIGPNGAGKSTLLRAL 56 >gi|270011692|gb|EFA08140.1| hypothetical protein TcasGA2_TC005757 [Tribolium castaneum] Length = 1164 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 D + G NG GKS++ ++I ++ +++ K+ Sbjct: 12 NDGFNAITGLNGSGKSNILDSICFVLGISNLSHVRVGNLQDLIYKS 57 >gi|251793335|ref|YP_003008063.1| RecF/RecN/SMC N domain [Aggregatibacter aphrophilus NJ8700] gi|247534730|gb|ACS97976.1| RecF/RecN/SMC N domain, putative [Aggregatibacter aphrophilus NJ8700] Length = 409 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 K+ ++IS F+ + +I+ ++ G NG GKS+ +A+ +L Sbjct: 1 MKINYLKISGFKSI-QNVEIKDVSSFMVLAGANGTGKSNFVDALAFL 46 >gi|118576410|ref|YP_876153.1| ABC-type branched-chain amino acid transport system, ATPase component [Cenarchaeum symbiosum A] gi|118194931|gb|ABK77849.1| ABC-type branched-chain amino acid transport system, ATPase component [Cenarchaeum symbiosum A] Length = 223 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 14/57 (24%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +KSL S Y +K+I + +D E + +T+V G NG GKS++ +++ Sbjct: 6 TKSLHSGYGKKVILQGVD--------------FEAGNGITVVVGANGSGKSTVLKSM 48 >gi|6822086|emb|CAB70951.1| putative ATP-binding subunit [Nostoc sp. PCC 7120] Length = 263 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 17/95 (17%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAI---------EWL 73 I + ++ +S F GF + ++ F+ L +V G NG GK++ + I L Sbjct: 5 ILETENVTVS-FDGFKALNQLNFSMDVGELRVVIGPNGAGKTTFLDVITGKVQPTIGRVL 63 Query: 74 FYGYTQRRKHGDSIKKRSI----KTPMPMCMAVPR 104 F G R I +R I +TP PR Sbjct: 64 FKGKNLRSLREHQIARRGIGRKFQTPRVYLNLTPR 98 >gi|78044098|ref|YP_360799.1| DNA repair protein RecN [Carboxydothermus hydrogenoformans Z-2901] gi|77996213|gb|ABB15112.1| DNA repair protein RecN [Carboxydothermus hydrogenoformans Z-2901] Length = 552 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL + + +F G E +EF L ++ G+ G GKS L +A+ L ++ GD ++ Sbjct: 2 LLALTVENF-GLIERVNMEFTPGLNVLTGETGAGKSMLIDALLLLLG----QKARGDMVR 56 Query: 89 K 89 K Sbjct: 57 K 57 >gi|77361976|ref|YP_341550.1| exonuclease sbcCD subunit C [Pseudoalteromonas haloplanktis TAC125] gi|76876887|emb|CAI89104.1| exonuclease sbcCD subunit C [Pseudoalteromonas haloplanktis TAC125] Length = 1217 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 9/73 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I + + + I+F L + G G GKS++ +AI Y T R Sbjct: 1 MKITAVRIHNLASIVDAE-IDFLAAPLKDAGLFAITGDTGAGKSTILDAICLALYAKTAR 59 Query: 81 RK--HGDSIKKRS 91 G+ ++ + Sbjct: 60 LGGDRGNKVEFQG 72 >gi|330965953|gb|EGH66213.1| chromosome partition protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 596 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ ++ I +FRG + ++F H ++ G N GK++L EA+ + Sbjct: 1 MRVANLRIENFRG-VKTGFVQFGKHPVLI-GDNNTGKTTLIEAMTLVLG 47 >gi|225018094|ref|ZP_03707286.1| hypothetical protein CLOSTMETH_02031 [Clostridium methylpentosum DSM 5476] gi|224949091|gb|EEG30300.1| hypothetical protein CLOSTMETH_02031 [Clostridium methylpentosum DSM 5476] Length = 446 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL+ +E G+ + I+F D +TI++G NG GK+++ + I +F Sbjct: 1 MKLVRVEFKKLFGYFDY-SIDFHDTVTILHGLNGCGKTTMLQTINAVF 47 >gi|218185967|gb|EEC68394.1| hypothetical protein OsI_36551 [Oryza sativa Indica Group] Length = 923 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +++IE+S+F + L +V G NG GKSSL AI + Sbjct: 39 IVEIELSNFMTYH-RLACRPGPRLNLVLGPNGSGKSSLVCAIAFAL 83 >gi|212224576|ref|YP_002307812.1| ABC-type iron(III)-siderophore transport system, ATPase component [Thermococcus onnurineus NA1] gi|212009533|gb|ACJ16915.1| ABC-type iron(III)-siderophore transport system, ATPase component [Thermococcus onnurineus NA1] Length = 240 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 39 GFTEIQ---KIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSI 92 + E Q ++EF+ L + G NG GKS+L +++ + + +G + Sbjct: 8 SYGERQILKRVEFSADKGELLAIIGPNGAGKSTLLKSLVGILKPIGHVKLNGIDVLSLKP 67 Query: 93 KTPMPMCMAVPRCKY 107 K + VP+ Y Sbjct: 68 KERAKLITYVPQSSY 82 >gi|146310135|ref|YP_001175209.1| SMC domain-containing protein [Enterobacter sp. 638] gi|145317011|gb|ABP59158.1| SMC domain protein [Enterobacter sp. 638] Length = 666 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD----------HLTIVNGQNGYGKSSLSEAIEWLFYG 76 + + + +FR F I+ A + + G NG GK+S+ AI YG Sbjct: 1 MLIKQLVLRNFRVFNGTHVIDLAPRKRQNDDNSRPIVLFGGLNGAGKTSILSAIRLALYG 60 >gi|15898520|ref|NP_343125.1| hypothetical protein SSO1710 [Sulfolobus solfataricus P2] gi|15898588|ref|NP_343193.1| hypothetical protein SSO1789 [Sulfolobus solfataricus P2] gi|284175705|ref|ZP_06389674.1| hypothetical protein Ssol98_13763 [Sulfolobus solfataricus 98/2] gi|13814957|gb|AAK41915.1| Hypothetical protein SSO1710 [Sulfolobus solfataricus P2] gi|13815037|gb|AAK41983.1| Hypothetical protein SSO1789 [Sulfolobus solfataricus P2] gi|261603021|gb|ACX92624.1| hypothetical protein Ssol_2488 [Sulfolobus solfataricus 98/2] Length = 464 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 I IS+FR F + + I + ++ G+N GK+++ EAI G + + Sbjct: 204 IRISNFRRFRDFKMIFPEFKIGVILGKNNVGKTTILEAI--AMLGKNEDKIRK 254 >gi|307700777|ref|ZP_07637802.1| DNA repair protein RecN [Mobiluncus mulieris FB024-16] gi|307613772|gb|EFN93016.1| DNA repair protein RecN [Mobiluncus mulieris FB024-16] Length = 573 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I + G ++ F+ T++ G+ G GK+ L ++ WL + Sbjct: 2 IESLRIENL-GTISHAELGFSPGFTVITGETGAGKTMLLTSLNWLLGAQPRASL 54 >gi|310722617|ref|YP_003969440.1| recombination endonuclease subunit [Aeromonas phage phiAS5] gi|306021460|gb|ADM79994.1| recombination endonuclease subunit [Aeromonas phage phiAS5] Length = 769 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 18/30 (60%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 T+V G NG GKS+ EAI ++ YG R Sbjct: 31 TLVTGTNGAGKSTFIEAITFMLYGKAFRDV 60 >gi|306818923|ref|ZP_07452644.1| DNA repair protein RecN [Mobiluncus mulieris ATCC 35239] gi|304648325|gb|EFM45629.1| DNA repair protein RecN [Mobiluncus mulieris ATCC 35239] Length = 578 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I + G ++ F+ T++ G+ G GK+ L ++ WL + Sbjct: 7 IESLRIENL-GTISHAELGFSPGFTVITGETGAGKTMLLTSLNWLLGAQPRASL 59 >gi|303237205|ref|ZP_07323775.1| DNA replication and repair protein RecF [Prevotella disiens FB035-09AN] gi|302482592|gb|EFL45617.1| DNA replication and repair protein RecF [Prevotella disiens FB035-09AN] Length = 371 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + L G NG GK++L +A+ +L + + Sbjct: 1 MRLDKLSIINYKNIQAAT-LNLSAKLNCFIGHNGVGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 I 87 + Sbjct: 60 V 60 >gi|296100985|ref|YP_003611131.1| ATP-dependent OLD family endonuclease [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055444|gb|ADF60182.1| ATP-dependent OLD family endonuclease [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 579 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 KL IEI +FRG I ++ T + G N GKS++ +AI+ L Sbjct: 1 MKLERIEIQNFRGIG-TASINL-ENFTTLIGSNNIGKSTVLKAIKILVDTT 49 >gi|269977142|ref|ZP_06184115.1| DNA repair protein RecN [Mobiluncus mulieris 28-1] gi|269934445|gb|EEZ91006.1| DNA repair protein RecN [Mobiluncus mulieris 28-1] Length = 573 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I + G ++ F+ T++ G+ G GK+ L ++ WL + Sbjct: 2 IESLRIENL-GTISHAELGFSPGFTVITGETGAGKTMLLTSLNWLLGAQPRASL 54 >gi|227875614|ref|ZP_03993753.1| possible DNA repair protein RecN [Mobiluncus mulieris ATCC 35243] gi|227843799|gb|EEJ53969.1| possible DNA repair protein RecN [Mobiluncus mulieris ATCC 35243] Length = 578 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + I + G ++ F+ T++ G+ G GK+ L ++ WL + Sbjct: 7 IESLRIENL-GTISHAELGFSPGFTVITGETGAGKTMLLTSLNWLLGAQPRASL 59 >gi|162447342|ref|YP_001620474.1| DNA repair protein ATPase [Acholeplasma laidlawii PG-8A] gi|161985449|gb|ABX81098.1| DNA repair protein, ATPase [Acholeplasma laidlawii PG-8A] Length = 547 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L +E+ +F + IEF LT + G+ G GKS L E+++ LF + Sbjct: 2 LNYLEVKNF-ALIDDLNIEFKHGLTSLTGETGSGKSILLESLQLLFGKRS 50 >gi|89893821|ref|YP_517308.1| hypothetical protein DSY1075 [Desulfitobacterium hafniense Y51] gi|89333269|dbj|BAE82864.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 251 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGF-------TEIQKIEFADHLTIVNGQNGYGKSSL 66 SKSL+ Y +L + + F + + + +T + G+NG GKS++ Sbjct: 4 SKSLSPYIK---YIELDRVRVPSFSRYPFHLPAVRNLDTLALHPQVTFLVGENGSGKSTI 60 Query: 67 SEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPM 98 EAI + YG+ + S +T + Sbjct: 61 LEAIA-VAYGFNAEGGTK-NFNFSSRRTHSDL 90 >gi|37528709|ref|NP_932054.1| hypothetical protein plu4903 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788148|emb|CAE17275.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 887 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKHGDSIK 88 G+ + IE +DHL V G G GKS+L E I + F +G + +H +K Sbjct: 272 GYLDGMDIELSDHLNAVIGGRGTGKSTLLECIRYAFDLEPFGKASKAQHDAIVK 325 >gi|315650025|ref|ZP_07903105.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487795|gb|EFU78098.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 476 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ I+I + G E + AD ++ ++G+NG GK+S+ +AI + + R D Sbjct: 1 MRVTKIKIKNLFGIKEYE----ADGKSVELSGKNGVGKTSVIDAIRYALTNKSSR----D 52 Query: 86 SIKKRS 91 I + Sbjct: 53 YIVRNG 58 >gi|315282233|ref|ZP_07870687.1| DNA repair protein RecN [Listeria marthii FSL S4-120] gi|313614135|gb|EFR87825.1| DNA repair protein RecN [Listeria marthii FSL S4-120] Length = 324 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|313608924|gb|EFR84681.1| DNA repair protein RecN [Listeria monocytogenes FSL F2-208] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|300907182|ref|ZP_07124845.1| RecF/RecN/SMC protein [Escherichia coli MS 84-1] gi|301303609|ref|ZP_07209731.1| RecF/RecN/SMC protein [Escherichia coli MS 124-1] gi|300401057|gb|EFJ84595.1| RecF/RecN/SMC protein [Escherichia coli MS 84-1] gi|300841108|gb|EFK68868.1| RecF/RecN/SMC protein [Escherichia coli MS 124-1] gi|315257839|gb|EFU37807.1| RecF/RecN/SMC protein [Escherichia coli MS 85-1] Length = 399 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I++ +F+ F +++ ++ G NG GK++L + +L Sbjct: 1 MLIEAIKLKNFKSFQDLEMNNIPK-FCVIVGANGVGKTTLFDVFGFL 46 >gi|284801753|ref|YP_003413618.1| DNA repair and genetic recombination [Listeria monocytogenes 08-5578] gi|284994895|ref|YP_003416663.1| DNA repair and genetic recombination [Listeria monocytogenes 08-5923] gi|284057315|gb|ADB68256.1| DNA repair and genetic recombination [Listeria monocytogenes 08-5578] gi|284060362|gb|ADB71301.1| DNA repair and genetic recombination [Listeria monocytogenes 08-5923] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|262377006|ref|ZP_06070232.1| DNA repair protein RecN [Acinetobacter lwoffii SH145] gi|262308044|gb|EEY89181.1| DNA repair protein RecN [Acinetobacter lwoffii SH145] Length = 553 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F E I+ ++ G+ G GKS L +A+ T Sbjct: 2 LTHLTLINF-ALAEHLAIDIDKGFNVLTGETGAGKSLLLDALSACLGERT 50 >gi|258611435|ref|ZP_05711507.1| LOW QUALITY PROTEIN: DNA repair protein RecN [Listeria monocytogenes FSL N3-165] gi|258600007|gb|EEW13332.1| LOW QUALITY PROTEIN: DNA repair protein RecN [Listeria monocytogenes FSL N3-165] Length = 479 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|217964486|ref|YP_002350164.1| DNA repair protein RecN [Listeria monocytogenes HCC23] gi|217333756|gb|ACK39550.1| DNA repair protein RecN [Listeria monocytogenes HCC23] gi|307570950|emb|CAR84129.1| DNA repair protein [Listeria monocytogenes L99] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|254829875|ref|ZP_05234530.1| DNA repair and genetic recombination [Listeria monocytogenes 10403S] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|148264835|ref|YP_001231541.1| SMC domain-containing protein [Geobacter uraniireducens Rf4] gi|146398335|gb|ABQ26968.1| SMC domain protein [Geobacter uraniireducens Rf4] Length = 378 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 L + I F+ ++ E + +L ++ G NG GKS+ + Sbjct: 5 LDKLTIKGFKSIRSLEDFELS-NLNVLIGGNGAGKSNFID 43 >gi|153953563|ref|YP_001394328.1| ATP-binding protein [Clostridium kluyveri DSM 555] gi|219854185|ref|YP_002471307.1| hypothetical protein CKR_0842 [Clostridium kluyveri NBRC 12016] gi|146346444|gb|EDK32980.1| Predicted ATP-binding protein [Clostridium kluyveri DSM 555] gi|219567909|dbj|BAH05893.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 244 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 20/29 (68%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ +EF +T + G+NG GKS++ EAI Sbjct: 35 DLSMLEFHPKVTYIVGENGTGKSTILEAI 63 >gi|311977950|ref|YP_003987070.1| uncharacterized hydrolase [Acanthamoeba polyphaga mimivirus] gi|82050870|sp|Q5UR33|YR555_MIMIV RecName: Full=Uncharacterized protein R555 gi|55417169|gb|AAV50819.1| putative DNA repair protein [Acanthamoeba polyphaga mimivirus] gi|308204903|gb|ADO18704.1| uncharacterized hydrolase [Acanthamoeba polyphaga mimivirus] Length = 1351 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 +LL++ S+ + + I+F + + + N YGKS++ + I + + R Sbjct: 426 RLLELRFSNALSYGKDNVIDFRNYDPNKIIGIFAPNHYGKSAVLDIILFCLFDKCSRGDR 485 Query: 84 GDSIKKRSIKTPMPMCMAVPRCKYQLK 110 D + K + +++ +Y ++ Sbjct: 486 RDILNKNEKNMSCSILLSIGSQQYYIE 512 >gi|46907594|ref|YP_013983.1| DNA repair protein RecN [Listeria monocytogenes serotype 4b str. F2365] gi|226223969|ref|YP_002758076.1| DNA repair and genetic recombination protein RecN [Listeria monocytogenes Clip81459] gi|254993063|ref|ZP_05275253.1| DNA repair and genetic recombination protein RecN [Listeria monocytogenes FSL J2-064] gi|255521542|ref|ZP_05388779.1| DNA repair and genetic recombination protein RecN [Listeria monocytogenes FSL J1-175] gi|46880862|gb|AAT04160.1| DNA repair protein RecN [Listeria monocytogenes serotype 4b str. F2365] gi|225876431|emb|CAS05140.1| DNA repair and genetic recombination protein RecN [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328467506|gb|EGF38575.1| DNA repair and genetic recombination protein RecN [Listeria monocytogenes 1816] gi|332311809|gb|EGJ24904.1| DNA repair protein RecN [Listeria monocytogenes str. Scott A] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|54302573|ref|YP_132566.1| ATP-dependent endonuclease [Photobacterium profundum SS9] gi|46915995|emb|CAG22766.1| hypothetical ATP-dependent endonuclease of the OLD family [Photobacterium profundum SS9] Length = 548 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L IE+S FRG + + F + L+++ G+N +GKSSL +A+ T+ Sbjct: 1 MHLERIEVSGFRGI-KRLSLSF-NQLSVLIGENAWGKSSLLDALSIALAVNTE 51 >gi|69244420|ref|ZP_00602836.1| conserved hypothetical protein [Enterococcus faecium DO] gi|257882124|ref|ZP_05661777.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|260562429|ref|ZP_05832943.1| conserved hypothetical protein [Enterococcus faecium C68] gi|293560741|ref|ZP_06677220.1| conserved hypothetical protein [Enterococcus faecium E1162] gi|293566176|ref|ZP_06678579.1| conserved hypothetical protein [Enterococcus faecium E1071] gi|294618801|ref|ZP_06698328.1| conserved hypothetical protein [Enterococcus faecium E1679] gi|294621235|ref|ZP_06700419.1| conserved hypothetical protein [Enterococcus faecium U0317] gi|314938538|ref|ZP_07845822.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314940883|ref|ZP_07847789.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314950053|ref|ZP_07853342.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314952020|ref|ZP_07855043.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314991901|ref|ZP_07857356.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314995159|ref|ZP_07860273.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68196361|gb|EAN10789.1| conserved hypothetical protein [Enterococcus faecium DO] gi|257817782|gb|EEV45110.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|260073353|gb|EEW61694.1| conserved hypothetical protein [Enterococcus faecium C68] gi|291590102|gb|EFF21894.1| conserved hypothetical protein [Enterococcus faecium E1071] gi|291594989|gb|EFF26339.1| conserved hypothetical protein [Enterococcus faecium E1679] gi|291599189|gb|EFF30222.1| conserved hypothetical protein [Enterococcus faecium U0317] gi|291605332|gb|EFF34787.1| conserved hypothetical protein [Enterococcus faecium E1162] gi|313590568|gb|EFR69413.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593485|gb|EFR72330.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313595810|gb|EFR74655.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313600241|gb|EFR79084.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313642095|gb|EFS06675.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313643619|gb|EFS08199.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 906 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPVYGEFAVERYKQQ 90 >gi|16803408|ref|NP_464893.1| DNA repair and genetic recombination [Listeria monocytogenes EGD-e] gi|47095951|ref|ZP_00233554.1| DNA repair protein RecN [Listeria monocytogenes str. 1/2a F6854] gi|224501689|ref|ZP_03669996.1| DNA repair and genetic recombination [Listeria monocytogenes FSL R2-561] gi|254898467|ref|ZP_05258391.1| DNA repair and genetic recombination [Listeria monocytogenes J0161] gi|254912042|ref|ZP_05262054.1| DNA repair protein RecN [Listeria monocytogenes J2818] gi|254936369|ref|ZP_05268066.1| DNA repair protein RecN [Listeria monocytogenes F6900] gi|16410784|emb|CAC99446.1| DNA repair and genetic recombination [Listeria monocytogenes EGD-e] gi|47015697|gb|EAL06627.1| DNA repair protein RecN [Listeria monocytogenes str. 1/2a F6854] gi|258608960|gb|EEW21568.1| DNA repair protein RecN [Listeria monocytogenes F6900] gi|293590008|gb|EFF98342.1| DNA repair protein RecN [Listeria monocytogenes J2818] Length = 563 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSADFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|330040360|ref|XP_003239874.1| structural maintenance of chromosomes 3 [Cryptomonas paramecium] gi|327206799|gb|AEA38976.1| structural maintenance of chromosomes 3 [Cryptomonas paramecium] Length = 1033 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++++++ +F+ + K + + + G NG GK+SL EAI +F R K Sbjct: 1 MHIIEVKLFNFKSYRHYIFKKHLSPGINVFTGYNGSGKTSLLEAIGVIFINQKFREKKNT 60 Query: 86 SIKKRSIKTPMPMCM 100 K R + CM Sbjct: 61 LFKSRFLFCKEESCM 75 >gi|300871438|ref|YP_003786311.1| ATPase [Brachyspira pilosicoli 95/1000] gi|300689139|gb|ADK31810.1| ATPase involved in DNA repair [Brachyspira pilosicoli 95/1000] Length = 717 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT--------QRRKH 83 +++++F F E +D +T+ G N GK+++ +++ +LF + ++ Sbjct: 3 LKLNNFGKFKNK-SFEISDFITLFYGANESGKTTIFDSLMYLFSENKKNLGFSKMIKNRY 61 Query: 84 GDSIKKRSI 92 GD I S+ Sbjct: 62 GDEIDVESV 70 >gi|282866771|ref|ZP_06275810.1| ABC transporter related protein [Streptomyces sp. ACTE] gi|282558399|gb|EFB63962.1| ABC transporter related protein [Streptomyces sp. ACTE] Length = 569 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ H + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 337 VEVEHLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGSIKVG 396 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 397 DTVKISYVDQSR 408 >gi|237731476|ref|ZP_04561957.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907015|gb|EEH92933.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 265 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + +L I + +F GF + + L + G NG GK++L + I + R Sbjct: 24 VLQLEKINV-NFDGFQALTDLSLNIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGRAI 82 Query: 83 HGDS 86 + S Sbjct: 83 YDQS 86 >gi|77163565|ref|YP_342090.1| RecF protein [Nitrosococcus oceani ATCC 19707] gi|97180823|sp|Q3JF36|RECF_NITOC RecName: Full=DNA replication and repair protein recF gi|76881879|gb|ABA56560.1| DNA replication and repair protein RecF [Nitrosococcus oceani ATCC 19707] Length = 363 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + ++I +FR + IE + I++G N GK+S EAI L G + R Sbjct: 1 MMHITHLDIRNFRNL---KHIELHPSKGVNILSGANSSGKTSFLEAIYLLGLGRSFRTVQ 57 >gi|34496735|ref|NP_900950.1| hypothetical protein CV_1280 [Chromobacterium violaceum ATCC 12472] gi|34102590|gb|AAQ58955.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 364 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + ++ FR +E D L +V G NG GKS+L ++I+ Sbjct: 1 MPIHSLSLAGFRSIR-KLTLEL-DALNVVVGANGCGKSNLYKSIQ 43 >gi|330878212|gb|EGH12361.1| ABC transporter family protein 61 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 543 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 LI K L + + R F+ T + G NG GKS L++ Sbjct: 8 LIIKDLTLRLPDGRSLFSGLNATFSKQFTGIVGPNGSGKSMLAQ 51 >gi|328471736|gb|EGF42613.1| hypothetical protein VP10329_01235 [Vibrio parahaemolyticus 10329] Length = 663 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++ I ++R + + TI+ G+N GK+S +EA + ++ D Sbjct: 1 MKIKNVRIKNYRLLKD-VSFSIDEKTTIIVGRNNTGKTSFAEAFRSFLNHAGPKVRYEDF 59 Query: 87 IKKR 90 + Sbjct: 60 NQSC 63 >gi|298246443|ref|ZP_06970249.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] gi|297553924|gb|EFH87789.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] Length = 1293 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + FR E+ I F ++ G N GKS+L E+I + YG Sbjct: 1 MIILKHLTVERFRLLREVN-IHFPQRGSILIQGPNESGKSALLESIYFALYGEPIASDRK 59 >gi|291444648|ref|ZP_06584038.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291347595|gb|EFE74499.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 547 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ + + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 315 VEVENLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGSVKIG 374 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 375 DTVKISYVDQSR 386 >gi|284045052|ref|YP_003395392.1| ATPase-like protein [Conexibacter woesei DSM 14684] gi|283949273|gb|ADB52017.1| ATPase-like protein [Conexibacter woesei DSM 14684] Length = 416 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 L I I F+ + ++E L ++ G N GKS++ +A + L TQR Sbjct: 2 LQRIHIRGFKSLVD-VELELPR-LAVLAGPNAAGKSNVLDAFQMLARSGTQRTLAD 55 >gi|257899548|ref|ZP_05679201.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257837460|gb|EEV62534.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 906 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI 92 K Sbjct: 60 YTPKDGS 66 >gi|257885315|ref|ZP_05664968.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|293556275|ref|ZP_06674860.1| conserved hypothetical protein [Enterococcus faecium E1039] gi|257821171|gb|EEV48301.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|291601534|gb|EFF31801.1| conserved hypothetical protein [Enterococcus faecium E1039] Length = 906 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPVYGEFAVERYKQQ 90 >gi|257453528|ref|ZP_05618818.1| DNA repair protein RecN [Enhydrobacter aerosaccus SK60] gi|257448986|gb|EEV23939.1| DNA repair protein RecN [Enhydrobacter aerosaccus SK60] Length = 568 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + + +IE I+ G+ G GKS L +A+ G + Sbjct: 2 LTQLTLQNL-ALVTNAEIEMNAGFNIITGETGAGKSLLLDALTLCVGGRSDAGL 54 >gi|239941207|ref|ZP_04693144.1| putative ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987682|ref|ZP_04708346.1| putative ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 11379] Length = 554 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ + + F + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 322 VEVENLSKAFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLETPDSGSVKIG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|254520245|ref|ZP_05132301.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913994|gb|EEH99195.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 915 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR----KHG 84 + I I F G + IE +D ++ G+N GKS++ I YG +R K+ Sbjct: 3 INKIHIISFAGLKDKI-IELSDETNLIYGENEKGKSTIQNFIRIWLYGMNAKRSKDIKNN 61 Query: 85 DSIKKRSIKTPM 96 D ++ I Sbjct: 62 DRMRFMPIDGDK 73 >gi|153000394|ref|YP_001366075.1| hypothetical protein Shew185_1869 [Shewanella baltica OS185] gi|160876489|ref|YP_001555805.1| hypothetical protein Sbal195_3383 [Shewanella baltica OS195] gi|151365012|gb|ABS08012.1| conserved hypothetical protein [Shewanella baltica OS185] gi|160862011|gb|ABX50545.1| conserved hypothetical protein [Shewanella baltica OS195] gi|315268681|gb|ADT95534.1| hypothetical protein Sbal678_3392 [Shewanella baltica OS678] Length = 569 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ----RRK 82 + +EI ++R F KI+ + L+++ G+N GK++L +A+ +R Sbjct: 1 MYIRTVEIENYRAFKSF-KIKLSP-LSLIIGENEAGKTNLFDALALPLNSNDISFNKKRL 58 Query: 83 HGDSIKKRSIK 93 I + +IK Sbjct: 59 SVSDINREAIK 69 >gi|325264321|ref|ZP_08131052.1| hypothetical protein HMPREF0240_03328 [Clostridium sp. D5] gi|324030392|gb|EGB91676.1| hypothetical protein HMPREF0240_03328 [Clostridium sp. D5] Length = 557 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ ++ + +F F++ + D + + G+N YGKS++ I + +G + R Sbjct: 1 MEIKELYLENFGKFSDK-RFYIKDGIHVFYGENEYGKSTVYAFIRAMLFGLERGRGR 56 >gi|320100561|ref|YP_004176153.1| SMC domain-containing protein [Desulfurococcus mucosus DSM 2162] gi|319752913|gb|ADV64671.1| SMC domain protein [Desulfurococcus mucosus DSM 2162] Length = 826 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ + + + R F + + +T+++G G GK+S+ ++ +G +R+ D Sbjct: 1 MRIYGLMLENIRSFRKEYVVFPNKGVTVIHGATGSGKTSILMSVSAALFGL--QRESRDP 58 Query: 87 IKKRSIKTPMPMCMA 101 + + T + A Sbjct: 59 FRAFAYPTGRDLVRA 73 >gi|303249305|ref|ZP_07335536.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] gi|302489273|gb|EFL49232.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] Length = 453 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + + ++ F EFA L ++ G N GKS++ E + Sbjct: 2 MRRLVLTDFMAHA-HTVFEFAPGLNVLTGPNNTGKSAVVEGLR 43 >gi|300112750|ref|YP_003759325.1| DNA replication and repair protein RecF [Nitrosococcus watsonii C-113] gi|299538687|gb|ADJ27004.1| DNA replication and repair protein RecF [Nitrosococcus watsonii C-113] Length = 362 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ +FR + ++ A + +++G N GK+S EAI L G + R Sbjct: 1 MYITHLDVRNFRNL-KHTELHPAKGVNVLSGANSSGKTSFLEAIYLLGLGRSFRTVQ 56 >gi|260773716|ref|ZP_05882631.1| ATP-dependent endonuclease [Vibrio metschnikovii CIP 69.14] gi|260610677|gb|EEX35881.1| ATP-dependent endonuclease [Vibrio metschnikovii CIP 69.14] Length = 543 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L IEIS FRG + F D LT + G+N +GKSSL +A+ Sbjct: 1 MHLERIEISGFRGIR-RLSLAF-DELTTLIGENTWGKSSLLDAL 42 >gi|261209197|ref|ZP_05923589.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566114|ref|ZP_06446549.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|294614165|ref|ZP_06694085.1| hypothetical protein EfmE1636_0275 [Enterococcus faecium E1636] gi|260076743|gb|EEW64478.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289162059|gb|EFD09924.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291592941|gb|EFF24530.1| hypothetical protein EfmE1636_0275 [Enterococcus faecium E1636] Length = 906 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPVYGEFAVERYKQQ 90 >gi|218245353|ref|YP_002370724.1| AAA ATPase [Cyanothece sp. PCC 8801] gi|218165831|gb|ACK64568.1| AAA ATPase [Cyanothece sp. PCC 8801] Length = 369 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-------HLTIVNGQNGYGKSSLSEAI 70 K+ I I +F+ F + ++ F + + ++ G NG GK++L +AI Sbjct: 1 MKVESITIQNFKRF-DNIEVSFKNKTLQEVTNRFLILGDNGTGKTTLLQAI 50 >gi|326431243|gb|EGD76813.1| hypothetical protein PTSG_08161 [Salpingoeca sp. ATCC 50818] Length = 950 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFYG 76 ++ +++ +F + +EF L +V G NG GKSS+ A+ G Sbjct: 57 IVRMKLENFVTYN---HVEFRPGPSLNVVIGPNGTGKSSIVCAMALALAG 103 >gi|291437983|ref|ZP_06577373.1| AAA ATPase [Streptomyces ghanaensis ATCC 14672] gi|291340878|gb|EFE67834.1| AAA ATPase [Streptomyces ghanaensis ATCC 14672] Length = 241 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 13/64 (20%) Query: 48 FADHLTIVNGQNGYGKSSLSEAI-------------EWLFYGYTQRRKHGDSIKKRSIKT 94 F +T V G+NG GKS+L EA+ EW + + + G+ I+ + Sbjct: 41 FTAPVTFVVGENGSGKSTLVEALAEGFGLDPWGGSHEWRYASHRAKSLLGERIRFDAAPR 100 Query: 95 PMPM 98 M Sbjct: 101 GRRM 104 >gi|312112798|ref|YP_004010394.1| DNA replication and repair protein RecF [Rhodomicrobium vannielii ATCC 17100] gi|311217927|gb|ADP69295.1| DNA replication and repair protein RecF [Rhodomicrobium vannielii ATCC 17100] Length = 400 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + + ++ FR + + + ++ G NG GK++ EA+ L G R Sbjct: 7 IAIAKLTLTDFRNYRAVTLVT-GLGPVVLAGANGAGKTNCLEAVSLLTAGRGLRSL 61 >gi|266622785|ref|ZP_06115720.1| putative RecF/RecN/SMC N domain protein [Clostridium hathewayi DSM 13479] gi|288865461|gb|EFC97759.1| putative RecF/RecN/SMC N domain protein [Clostridium hathewayi DSM 13479] Length = 1123 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + + + F + G +G GKS++ +A++ + Y T R Sbjct: 9 LSRICLNNWH-YINRKTLSFNREINFFTGHSGSGKSTVIDAMQIVLYANTDGRG 61 >gi|260554961|ref|ZP_05827182.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|260411503|gb|EEX04800.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] Length = 271 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + +EI ++ QKI+F+ +LT++ G N GKSS+ +++ Sbjct: 2 IKQLEIKGYKSIV-NQKIDFS-NLTLLAGLNNSGKSSIIQSLR 42 >gi|239929661|ref|ZP_04686614.1| putative ABC transporter [Streptomyces ghanaensis ATCC 14672] Length = 235 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 13/64 (20%) Query: 48 FADHLTIVNGQNGYGKSSLSEAI-------------EWLFYGYTQRRKHGDSIKKRSIKT 94 F +T V G+NG GKS+L EA+ EW + + + G+ I+ + Sbjct: 35 FTAPVTFVVGENGSGKSTLVEALAEGFGLDPWGGSHEWRYASHRAKSLLGERIRFDAAPR 94 Query: 95 PMPM 98 M Sbjct: 95 GRRM 98 >gi|227544386|ref|ZP_03974435.1| DNA repair protein RecN [Lactobacillus reuteri CF48-3A] gi|300909753|ref|ZP_07127214.1| DNA repair protein RecN [Lactobacillus reuteri SD2112] gi|227185649|gb|EEI65720.1| DNA repair protein RecN [Lactobacillus reuteri CF48-3A] gi|300893618|gb|EFK86977.1| DNA repair protein RecN [Lactobacillus reuteri SD2112] Length = 559 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVP 103 + FAD +T++ G+ G GKS + +A+ L G R + I++ K + A+P Sbjct: 17 TLTFADQMTVLTGETGAGKSIIIDAVGLLAGG----RGSQEFIRRGEEKLSLQGQFAIP 71 >gi|190341511|gb|ACE74832.1| RecN [Enterobacter cowanii] Length = 541 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 17/35 (48%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I+F +T + G+ G GKS +A+ G + Sbjct: 6 IDFNSGMTAITGETGAGKSIAIDALGLCLGGRAEA 40 >gi|194466512|ref|ZP_03072499.1| DNA repair protein RecN [Lactobacillus reuteri 100-23] gi|194453548|gb|EDX42445.1| DNA repair protein RecN [Lactobacillus reuteri 100-23] Length = 559 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVP 103 + FAD +T++ G+ G GKS + +A+ L G R + I++ K + A+P Sbjct: 17 TLTFADQMTVLTGETGAGKSIIIDAVGLLAGG----RGSQEFIRRGEEKLSLQGQFAIP 71 >gi|88602031|ref|YP_502209.1| hypothetical protein Mhun_0737 [Methanospirillum hungatei JF-1] gi|88187493|gb|ABD40490.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 1282 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 K+ +++I F K F +TI+ G+N GK++ E + + +G+ R Sbjct: 1 MKIEELDIKGFGTLINR-KFSFPRTGVTILTGKNEAGKTTFLEFVRRMLFGFPTGRV 56 >gi|39997162|ref|NP_953113.1| DNA repair protein RecN [Geobacter sulfurreducens PCA] gi|39984052|gb|AAR35440.1| DNA repair protein RecN [Geobacter sulfurreducens PCA] gi|298506175|gb|ADI84898.1| DNA repair ATPase RecN [Geobacter sulfurreducens KN400] Length = 558 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L D+ I + + + F LT++ G+ G GKS + +A+ + G Sbjct: 2 LTDLSIRNL-AIIDSLHVSFDRGLTVLTGETGAGKSIIIDAVNLIMGGRASAEL 54 >gi|148544402|ref|YP_001271772.1| DNA repair protein RecN [Lactobacillus reuteri DSM 20016] gi|184153765|ref|YP_001842106.1| DNA repair protein RecN [Lactobacillus reuteri JCM 1112] gi|227363173|ref|ZP_03847307.1| DNA repair protein RecN [Lactobacillus reuteri MM2-3] gi|325682722|ref|ZP_08162238.1| DNA repair protein RecN [Lactobacillus reuteri MM4-1A] gi|148531436|gb|ABQ83435.1| DNA replication and repair protein RecN [Lactobacillus reuteri DSM 20016] gi|183225109|dbj|BAG25626.1| DNA repair protein RecN [Lactobacillus reuteri JCM 1112] gi|227071779|gb|EEI10068.1| DNA repair protein RecN [Lactobacillus reuteri MM2-3] gi|324977072|gb|EGC14023.1| DNA repair protein RecN [Lactobacillus reuteri MM4-1A] Length = 559 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 45 KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVP 103 + FAD +T++ G+ G GKS + +A+ L G R + I++ K + A+P Sbjct: 17 TLTFADQMTVLTGETGAGKSIIIDAVGLLAGG----RGSQEFIRRGEEKLSLQGQFAIP 71 >gi|194335819|ref|YP_002017613.1| DNA repair protein RecN [Pelodictyon phaeoclathratiforme BU-1] gi|194308296|gb|ACF42996.1| DNA repair protein RecN [Pelodictyon phaeoclathratiforme BU-1] Length = 567 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I +F + + F LTI+ G+ G GKS L A+ + + Sbjct: 2 LVSLYIRNF-ALIQELTVSFNPGLTIITGETGAGKSILVGALSLVLGERSSSDL 54 >gi|325568275|ref|ZP_08144642.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus ATCC 12755] gi|325158044|gb|EGC70197.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus ATCC 12755] Length = 896 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + ++L EI+ F + E Q F ++ G N GKS+L + I + +G+ ++ Sbjct: 5 VMRILKAEITGFGKYHE-QSFAFHPQNQLLFGHNEIGKSTLYQFIAAILFGFPKKTAKKK 63 Query: 86 S 86 Sbjct: 64 D 64 >gi|326782588|ref|YP_004323040.1| recombination endonuclease subunit [Synechococcus phage S-SM1] gi|310002802|gb|ADO97201.1| recombination endonuclease subunit [Synechococcus phage S-SM1] Length = 573 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + +I+ + T++ G NG GKS++ +A+ + + R+ + Sbjct: 1 MIIFESIRWKNFLSTGDQWTEIDLNEYSSTLIVGTNGAGKSTMLDALCFGLFNKPFRKIN 60 Query: 84 GDSIKKR--SIKTPMPMCMAVPRCKYQL 109 + T + +C ++ + +Y++ Sbjct: 61 RGQLVNSINEKSTKVEVCFSIGKDEYRV 88 >gi|284006726|emb|CBA71983.1| DNA repair protein RecN [Arsenophonus nasoniae] Length = 562 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L+ + I++F +I+F +T + G+ G GKS +A+ Sbjct: 11 LIQLTINNF-AIVRKLEIDFYPGMTTITGETGAGKSIAIDALGLCLG 56 >gi|255527619|ref|ZP_05394481.1| ATP-binding protein [Clostridium carboxidivorans P7] gi|296187662|ref|ZP_06856056.1| hypothetical protein CLCAR_3159 [Clostridium carboxidivorans P7] gi|255508691|gb|EET85069.1| ATP-binding protein [Clostridium carboxidivorans P7] gi|296047619|gb|EFG87059.1| hypothetical protein CLCAR_3159 [Clostridium carboxidivorans P7] Length = 56 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + IE+ +F F + ++ F+ + I+ G+NG GK+ L +AI Sbjct: 1 MSIKSIELRNFTVF-KNFRVNFSKGINIITGENGTGKTQLLKAI 43 >gi|190894002|ref|YP_001984296.1| probable overcoming lysogenization defect protein [Rhizobium etli CIAT 652] gi|190699663|gb|ACE93746.1| probable overcoming lysogenization defect protein [Rhizobium etli CIAT 652] Length = 603 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ I I +FR F + + + L + G+N GK+++ AI+ Sbjct: 1 MRVARIVIKNFRTF-QRLDVNVENDLCCIIGENNTGKTAILRAIQICLD 48 >gi|187250642|ref|YP_001875124.1| putative ATP-dependent endonuclease [Elusimicrobium minutum Pei191] gi|186970802|gb|ACC97787.1| putative ATP-dependent endonuclease [Elusimicrobium minutum Pei191] Length = 578 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ ++ I +FR + +F + +I+ G+N GK++ A+ +FY + K D Sbjct: 1 MKIKNVHIHNFRSILDA---DFPLESYSILAGENNSGKTTFINALR-VFYEDIKFNKAED 56 Query: 86 SIKKRSIKTP 95 K + Sbjct: 57 FPKMETSDVE 66 >gi|159043124|ref|YP_001531918.1| hemin importer ATP-binding subunit [Dinoroseobacter shibae DFL 12] gi|157910884|gb|ABV92317.1| hemin import ATP-binding protein hmuV [Dinoroseobacter shibae DFL 12] Length = 260 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 10/86 (11%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 S +AR + +L ++ FT LT + G NG GK++L A+ Sbjct: 2 SLHARNITVRLGRRDVLSGVDFTAQ-----PGALTAIVGPNGSGKTTLLRALVGEIGASG 56 Query: 79 QRRKHGDSIKKRSIKTPMPMCMAVPR 104 R +G + P +A R Sbjct: 57 DVRLNG-----LQTASAKPWALAAMR 77 >gi|49481963|gb|AAT66693.1| DNA repair and genetic recombination protein [Bacillus sp. BGSC W9A87] Length = 573 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E F LT++ G+ G GKS + +AI L G R + ++ Sbjct: 2 LAELSIKNF-AIIESLSXSFDKGLTVLXGETGAGKSIIIDAIHLLIGG----RGSAEFVR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 FGAEKAEIE 65 >gi|19553994|ref|NP_601996.1| hypothetical protein NCgl2706 [Corynebacterium glutamicum ATCC 13032] gi|62391639|ref|YP_227041.1| DNA repair ATPase [Corynebacterium glutamicum ATCC 13032] gi|21325577|dbj|BAC00198.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41326981|emb|CAF20825.1| ATPase involved in DNA repair [Corynebacterium glutamicum ATCC 13032] Length = 1111 Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 F+L I++ ++ F I +V G +G GKS+L +AI + Sbjct: 15 FRLSRIQLINWGTFHGTVDIPVTREGILVTGGSGSGKSTLIDAITAVL 62 >gi|330506977|ref|YP_004383405.1| hypothetical protein MCON_0794 [Methanosaeta concilii GP-6] gi|328927785|gb|AEB67587.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 449 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + I + F+ E IE LTI+ G N GKSS+ + + Sbjct: 5 ITRISVKGFKSLAEECSIEV-RPLTILAGANSSGKSSIMQPL 45 >gi|319651485|ref|ZP_08005613.1| DNA repair protein [Bacillus sp. 2_A_57_CT2] gi|317396800|gb|EFV77510.1| DNA repair protein [Bacillus sp. 2_A_57_CT2] Length = 560 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L +I I +F E + F LT++ G+ G GKS + +AI L G Sbjct: 2 LNEISIRNF-AIIEALSVSFEKGLTVLTGETGAGKSIIIDAIHLLAGG 48 >gi|309800465|ref|ZP_07694621.1| DNA repair protein RecN [Streptococcus infantis SK1302] gi|308115906|gb|EFO53426.1| DNA repair protein RecN [Streptococcus infantis SK1302] Length = 555 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIESISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|291451379|ref|ZP_06590769.1| ABC transporter ATP-binding protein [Streptomyces albus J1074] gi|291354328|gb|EFE81230.1| ABC transporter ATP-binding protein [Streptomyces albus J1074] Length = 547 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ H + F + I+ F + + + G NG GK++L + I+ L + K G Sbjct: 315 VEVEHLSKAFGDKVLIDDLSFTLPRNGIVGIIGPNGAGKTTLFKMIQGLEEADSGSIKVG 374 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 375 DTVKISYVDQSR 386 >gi|239979511|ref|ZP_04702035.1| putative ABC transporter ATP-binding protein [Streptomyces albus J1074] Length = 554 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+ H + F + I+ F + + + G NG GK++L + I+ L + K G Sbjct: 322 VEVEHLSKAFGDKVLIDDLSFTLPRNGIVGIIGPNGAGKTTLFKMIQGLEEADSGSIKVG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|15807275|ref|NP_296005.1| manganese ABC transporter ATP-binding protein [Deinococcus radiodurans R1] gi|6460091|gb|AAF11830.1|AE002060_9 manganese ABC transporter, ATP-binding protein, putative [Deinococcus radiodurans R1] Length = 239 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 E + F T V G NG GKS+L A+ L Y R Sbjct: 18 ENATLRFEAGQFTAVIGPNGAGKSTLLRALAGLLTDYEGR 57 >gi|169335380|ref|ZP_02862573.1| hypothetical protein ANASTE_01792 [Anaerofustis stercorihominis DSM 17244] gi|169258118|gb|EDS72084.1| hypothetical protein ANASTE_01792 [Anaerofustis stercorihominis DSM 17244] Length = 244 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 14 SKSLTSYYARKLIFKLLDIE----ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 +K + + R + K DI+ + + +++ F ++T +G+NG GKS+L EA Sbjct: 4 NKMMNDLFIRGVKIKFDDIKESSYVKEIQSIKNTKELTFNKNVTFFSGENGSGKSTLLEA 63 Query: 70 I 70 I Sbjct: 64 I 64 >gi|110801164|ref|YP_696838.1| hypothetical protein CPF_2415 [Clostridium perfringens ATCC 13124] gi|110675811|gb|ABG84798.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124] Length = 922 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R ++ Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK-TLS 60 Query: 89 KRSIKTPM 96 R+ TP+ Sbjct: 61 DRAKYTPL 68 >gi|27379743|ref|NP_771272.1| hypothetical protein bll4632 [Bradyrhizobium japonicum USDA 110] gi|27352896|dbj|BAC49897.1| bll4632 [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ + IS+FRG + T++ G N GKS++ EA++ + Sbjct: 29 VKVKRLTISNFRGVA--HGVVHLAGHTLLVGGNNVGKSTVCEALDLVLG 75 >gi|332796182|ref|YP_004457682.1| ATPase-like protein [Acidianus hospitalis W1] gi|332693917|gb|AEE93384.1| ATPase-like protein [Acidianus hospitalis W1] Length = 496 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL---FYGYTQRRKH 83 +LL+ ++FR +++ + L +V G NGYGK++ +I ++R Sbjct: 1 MRLLEFYTNNFRSLSDVSIKDIG-GLNVVVGFNGYGKTNFLSSIYLFIKNLNAGIEKRSF 59 Query: 84 GDS-----IKKRSIKTPMPMCMA 101 D+ + + T + + Sbjct: 60 EDNNQEYLLLWQGYDTSKEITLG 82 >gi|295110067|emb|CBL24020.1| hypothetical protein [Ruminococcus obeum A2-162] Length = 190 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 32 IEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +EI+++R T I F D L + G+N GK+++ E I Sbjct: 7 VEINNYRNLTGKT-ITFNDTLNFLIGENNIGKTNILELINICL 48 >gi|238922298|ref|YP_002935812.1| hypothetical protein EUBELI_20534 [Eubacterium eligens ATCC 27750] gi|238873970|gb|ACR73678.1| Hypothetical protein EUBELI_20534 [Eubacterium eligens ATCC 27750] Length = 619 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ + I +F+ E++ + D + I+ G+N GKS + +AI G + Sbjct: 1 MRIEYLLIRNFKSIRELEINDIED-VLILVGRNNAGKSVVLDAIR-AVTGDYEVSLRD 56 >gi|257066520|ref|YP_003152776.1| DNA repair protein RecN [Anaerococcus prevotii DSM 20548] gi|256798400|gb|ACV29055.1| DNA repair protein RecN [Anaerococcus prevotii DSM 20548] Length = 562 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL++ I +F + I F + ++ G+ G GKS + +AI R DSI Sbjct: 2 LLELFIDNF-VIIKRNHIYFEEGFNVLTGETGSGKSLILQAINLCLG----ARADKDSIG 56 Query: 89 KRSIKT 94 + + KT Sbjct: 57 RFADKT 62 >gi|152986081|ref|YP_001350903.1| urea ABC transporter ATP-binding protein UrtD [Pseudomonas aeruginosa PA7] gi|150961239|gb|ABR83264.1| urea ABC transporter, ATP-binding protein UrtD [Pseudomonas aeruginosa PA7] Length = 285 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I L DI +S F+ ++ L + G NG GK++L + I + Sbjct: 44 ILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYF 103 Query: 84 GDSI 87 GD++ Sbjct: 104 GDTL 107 >gi|121998262|ref|YP_001003049.1| DNA repair protein RecN [Halorhodospira halophila SL1] gi|121589667|gb|ABM62247.1| DNA replication and repair protein RecN [Halorhodospira halophila SL1] Length = 556 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +I I F E +EF + + ++ G+ G GKS L +A+ Sbjct: 2 LREIHIRDF-AIVERLDLEFGEGMHVLTGETGAGKSILLDALGLCLG 47 >gi|254238418|ref|ZP_04931741.1| hypothetical protein PACG_04559 [Pseudomonas aeruginosa C3719] gi|126170349|gb|EAZ55860.1| hypothetical protein PACG_04559 [Pseudomonas aeruginosa C3719] Length = 285 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I L DI +S F+ ++ L + G NG GK++L + I + Sbjct: 44 ILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYF 103 Query: 84 GDSI 87 GD++ Sbjct: 104 GDTL 107 >gi|115525320|ref|YP_782231.1| hypothetical protein RPE_3318 [Rhodopseudomonas palustris BisA53] gi|115519267|gb|ABJ07251.1| hypothetical protein RPE_3318 [Rhodopseudomonas palustris BisA53] Length = 1279 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKSSLSE 68 ++ S T+ A+ ++L +E F G +F I+ G NG GKSSL Sbjct: 76 IAASETTTTAQSGPWRLQKMETDGFGGLNICNGPTFSHDFDGESLILQGSNGSGKSSLVG 135 Query: 69 AIEWLFYGYTQR 80 A+ W G R Sbjct: 136 AVIWALTGERPR 147 >gi|116053010|ref|YP_793328.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296391695|ref|ZP_06881170.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|115588231|gb|ABJ14246.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 285 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I L DI +S F+ ++ L + G NG GK++L + I + Sbjct: 44 ILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYF 103 Query: 84 GDSI 87 GD++ Sbjct: 104 GDTL 107 >gi|15600054|ref|NP_253548.1| ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107103960|ref|ZP_01367878.1| hypothetical protein PaerPA_01005032 [Pseudomonas aeruginosa PACS2] gi|218893956|ref|YP_002442825.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254244242|ref|ZP_04937564.1| hypothetical protein PA2G_05091 [Pseudomonas aeruginosa 2192] gi|9951133|gb|AAG08246.1|AE004899_7 probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126197620|gb|EAZ61683.1| hypothetical protein PA2G_05091 [Pseudomonas aeruginosa 2192] gi|218774184|emb|CAW30001.1| probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 285 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I L DI +S F+ ++ L + G NG GK++L + I + Sbjct: 44 ILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYF 103 Query: 84 GDSI 87 GD++ Sbjct: 104 GDTL 107 >gi|331005322|ref|ZP_08328709.1| DNA repair protein RecN [gamma proteobacterium IMCC1989] gi|330420861|gb|EGG95140.1| DNA repair protein RecN [gamma proteobacterium IMCC1989] Length = 557 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I++F E ++ +T + G+ G GKS L +A+ R D ++ Sbjct: 2 LTHITINNF-TLVEHLDLDLKTGMTAITGETGTGKSILLDALAMTLGE----RADADRVR 56 Query: 89 KRSIK 93 S + Sbjct: 57 FGSKR 61 >gi|325298207|ref|YP_004258124.1| ATP-binding protein [Bacteroides salanitronis DSM 18170] gi|324317760|gb|ADY35651.1| ATP-binding protein [Bacteroides salanitronis DSM 18170] Length = 345 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + I ++ F F + F + + ++ G+NG GK+ + + + Sbjct: 2 INSITLAGFTSFIDN-SFSFVNGVNVLIGKNGTGKTHVLKCLASAL 46 >gi|319654284|ref|ZP_08008372.1| ferrichrome ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317393984|gb|EFV74734.1| ferrichrome ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 281 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 13/58 (22%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 Y+ +LI K L ++I +T + G NG GKS+L +AI + + Sbjct: 13 YSERLIVKDLSVQIP-------------DKKITTIIGPNGCGKSTLLKAITRIISHQS 57 >gi|288556610|ref|YP_003428545.1| ferrichrome ABC transporter ATP-binding protein [Bacillus pseudofirmus OF4] gi|288547770|gb|ADC51653.1| Ferrichrome ABC transporter (ATP-binding protein) [Bacillus pseudofirmus OF4] Length = 282 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 45 KIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYT 78 I D +T + G NG GKS+L +AI + + Sbjct: 23 SINIPDGKITTIIGPNGCGKSTLLKAITRVISSQS 57 >gi|253687915|ref|YP_003017105.1| ABC transporter related [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754493|gb|ACT12569.1| ABC transporter related [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 283 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 14/91 (15%) Query: 2 TRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGY 61 TR+ N A S+SLT Y ++++ LDI + A ++++ G NG Sbjct: 8 TRIPHTNREAIASQSLTLSYEKQIVIDALDITLP-------------ARKISVLVGSNGC 54 Query: 62 GKSSLSEAIEWLFYGYTQR-RKHGDSIKKRS 91 GKS+L ++ L + +G I ++S Sbjct: 55 GKSTLLKSFARLLKPTSGTIIVNGADIHRQS 85 >gi|125974760|ref|YP_001038670.1| hypothetical protein Cthe_2275 [Clostridium thermocellum ATCC 27405] gi|125714985|gb|ABN53477.1| hypothetical protein Cthe_2275 [Clostridium thermocellum ATCC 27405] Length = 315 Score = 38.4 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 16/64 (25%) Query: 29 LLDIEISHFRGFTEIQKIEF-------------ADHL---TIVNGQNGYGKSSLSEAIEW 72 L I + +F+ F I+F + + G N GKS++ AI + Sbjct: 2 LAKIIMKNFKSFKNETVIDFTRINYKFLENNVSNNGVLKGVAFYGANASGKSNVLWAIRF 61 Query: 73 LFYG 76 L Sbjct: 62 LLDE 65 >gi|254423980|ref|ZP_05037698.1| ABC transporter, ATP-binding protein, putative [Synechococcus sp. PCC 7335] gi|196191469|gb|EDX86433.1| ABC transporter, ATP-binding protein, putative [Synechococcus sp. PCC 7335] Length = 255 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 17/100 (17%) Query: 26 IFKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAI---------EWL 73 + ++ ++ +S F GF I + F L ++ G NG GK++ + I L Sbjct: 10 LLEIDNVTVS-FDGFKAINGLNFTLAERGLRVIIGPNGAGKTTFLDVITGKVQPTTGRAL 68 Query: 74 FYGYTQRRKHGDSIKKRSI----KTPMPMCMAVPRCKYQL 109 F G + +I + I +TP PR +L Sbjct: 69 FKGKDIKSLPEHAIARLGIGRKFQTPRVYLNLTPRENLEL 108 >gi|170053090|ref|XP_001862515.1| structural maintenance of chromosomes 5 smc5 [Culex quinquefasciatus] gi|167873770|gb|EDS37153.1| structural maintenance of chromosomes 5 smc5 [Culex quinquefasciatus] Length = 1046 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ K+ + F + ++ +HL I+ G NG GKS++ A+ G+ + Sbjct: 4 IVGKIKSTAVKDFVTY-DVAIFYPDEHLNIIIGPNGTGKSTIVAAVVLGMGGHCKLLSRS 62 Query: 85 DSIKK 89 SI+ Sbjct: 63 SSIED 67 >gi|119510679|ref|ZP_01629807.1| ATP binding protein [Nodularia spumigena CCY9414] gi|119464633|gb|EAW45542.1| ATP binding protein [Nodularia spumigena CCY9414] Length = 423 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ +++ FRG ++ ++F + TI+ G NG GKSS+ E + L +T Sbjct: 1 MKVKRLKMQSFRGIGDLT-LDFNQNEPTILIGINGVGKSSIIECLAILLSRFT 52 >gi|331035445|gb|AEC53002.1| endonuclease [Synechococcus phage S-CRM01] Length = 574 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 26 IFKLLDIEISHFRGF-TEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +F G + IE H T+++G NG GKS++ +A+ + YG R+ + Sbjct: 1 MIIFKKLTYKNFLGVGNQPVSIELNKHKTTLIHGTNGSGKSTILDALCYSLYGKPFRKIN 60 >gi|319744557|gb|EFV96910.1| DNA repair protein RecN [Streptococcus agalactiae ATCC 13813] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|308050511|ref|YP_003914077.1| SMC domain protein [Ferrimonas balearica DSM 9799] gi|307632701|gb|ADN77003.1| SMC domain protein [Ferrimonas balearica DSM 9799] Length = 1243 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K++ I + I+ AD L + G G GKS+L +A+ Y T R Sbjct: 1 MKIVAIRGENLASLARPFDIDLADGPLAQSGLFAITGPTGSGKSTLLDALCLALYDQTPR 60 Query: 81 RKHG 84 G Sbjct: 61 YTTG 64 >gi|302129641|ref|NP_001180470.1| structural maintenance of chromosomes protein 5 [Danio rerio] Length = 1073 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I + +F + + L ++ G NG GKSS+ AI G T GD + Sbjct: 42 IVRITMHNFLTYDHSEVFP-GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKV 99 >gi|237728394|ref|ZP_04558875.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226909872|gb|EEH95790.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 575 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I I +FR + + L + G GKS++ +AI+ + +R Sbjct: 4 IRHISIQNFRAVRQAEWCP-GPSLNCLIGPGDSGKSTIIDAIDLVLG--ARRSFTFSDAD 60 Query: 89 KRSIKTPMPMCMAV 102 + T P+C+++ Sbjct: 61 FHLMNTATPICISI 74 >gi|116334397|ref|YP_795924.1| ABC-type cobalt transport system, ATPase component [Lactobacillus brevis ATCC 367] gi|116099744|gb|ABJ64893.1| ABC-type cobalt transport system, ATPase component [Lactobacillus brevis ATCC 367] Length = 469 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 48 FADHLTIVNGQNGYGKSSLSEAI 70 FA +T++ G NG GKS+L A+ Sbjct: 276 FAHQITLITGPNGSGKSTLLRAL 298 >gi|121596364|ref|YP_988260.1| hypothetical protein Ajs_4080 [Acidovorax sp. JS42] gi|120608444|gb|ABM44184.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 397 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + +++ ++R F + +++ D + V G N GKS+L + +L Sbjct: 14 ISRLQLQNWRNF-KKIEVDLRDRV-FVIGPNASGKSNLLDVFRFL 56 >gi|91783264|ref|YP_558470.1| ATP-dependent endonuclease [Burkholderia xenovorans LB400] gi|91687218|gb|ABE30418.1| Predicted ATP-dependent endonuclease of the OLD family [Burkholderia xenovorans LB400] Length = 613 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGY---TQRRK 82 +L I I +FR F + + +V G+N GK++L A+ + + RR Sbjct: 1 MRLSRIVIKNFRNF---KHFDVRLGEHAVVLGENKVGKTNLLFALRLILDPALPDSSRRL 57 Query: 83 HGDS 86 D Sbjct: 58 RIDD 61 >gi|22536680|ref|NP_687531.1| DNA repair protein RecN [Streptococcus agalactiae 2603V/R] gi|22533520|gb|AAM99403.1|AE014214_17 DNA repair protein RecN [Streptococcus agalactiae 2603V/R] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|77405269|ref|ZP_00782365.1| DNA repair protein RecN [Streptococcus agalactiae H36B] gi|77176064|gb|EAO78837.1| DNA repair protein RecN [Streptococcus agalactiae H36B] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|77409327|ref|ZP_00786030.1| DNA repair protein RecN [Streptococcus agalactiae COH1] gi|77172059|gb|EAO75225.1| DNA repair protein RecN [Streptococcus agalactiae COH1] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|76799067|ref|ZP_00781259.1| DNA repair protein RecN [Streptococcus agalactiae 18RS21] gi|76585582|gb|EAO62148.1| DNA repair protein RecN [Streptococcus agalactiae 18RS21] Length = 502 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|25010616|ref|NP_735011.1| DNA repair protein RecN [Streptococcus agalactiae NEM316] gi|76788066|ref|YP_329234.1| DNA repair protein RecN [Streptococcus agalactiae A909] gi|77412382|ref|ZP_00788692.1| DNA repair protein RecN [Streptococcus agalactiae CJB111] gi|77414001|ref|ZP_00790173.1| DNA repair protein RecN [Streptococcus agalactiae 515] gi|23094970|emb|CAD46191.1| Unknown [Streptococcus agalactiae NEM316] gi|76563123|gb|ABA45707.1| DNA repair protein RecN [Streptococcus agalactiae A909] gi|77159927|gb|EAO71066.1| DNA repair protein RecN [Streptococcus agalactiae 515] gi|77161570|gb|EAO72571.1| DNA repair protein RecN [Streptococcus agalactiae CJB111] Length = 552 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEEISLNFETGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|229830191|ref|ZP_04456260.1| hypothetical protein GCWU000342_02298 [Shuttleworthia satelles DSM 14600] gi|229791489|gb|EEP27603.1| hypothetical protein GCWU000342_02298 [Shuttleworthia satelles DSM 14600] Length = 899 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L+ I+ F + I F L + +NG+GK++ ++ +FYG R Sbjct: 1 MRLISCYIAGFGTIRDRNFI-FKPGLNAILEENGWGKTTFCVFLKAMFYGMEYSRGTKTL 59 Query: 87 IKKRSIK 93 +++ + Sbjct: 60 HERQRYE 66 >gi|221632725|ref|YP_002521946.1| DNA replication and repair protein recF [Thermomicrobium roseum DSM 5159] gi|254790496|sp|B9KZ04|RECF_THERP RecName: Full=DNA replication and repair protein recF gi|221155632|gb|ACM04759.1| DNA replication and repair protein recF [Thermomicrobium roseum DSM 5159] Length = 396 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + +E+ FR F + + L +V G NG GK+SL EA+ L + R Sbjct: 1 MLVRSLELEEFRCFRHLHLVLPDRGLRLV-GANGSGKTSLIEALYMLATTKSFRASLERH 59 Query: 87 IKKRSIKTPM 96 + RS + + Sbjct: 60 LVHRSSGSEL 69 >gi|160939291|ref|ZP_02086642.1| hypothetical protein CLOBOL_04185 [Clostridium bolteae ATCC BAA-613] gi|158438254|gb|EDP16014.1| hypothetical protein CLOBOL_04185 [Clostridium bolteae ATCC BAA-613] Length = 685 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 7/64 (10%) Query: 27 FKLLDIEISHFRGFTEIQ-------KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L + I +FR + ++ L ++ G+N GK+++ +AI+++ + Sbjct: 1 MYLSCVRIWNFRKYGYANLDATPALEVYLKGGLNVLIGENDTGKTAIIDAIKFVLGTRSH 60 Query: 80 RRKH 83 Sbjct: 61 DTLQ 64 >gi|108758619|ref|YP_628431.1| hypothetical protein MXAN_0148 [Myxococcus xanthus DK 1622] gi|108462499|gb|ABF87684.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 1074 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ + + F F+ + + + L ++ G N GKS+L + + +G+ +R Sbjct: 5 LRIDALRVLGFGRFSGLTR-DLGPGLHLLYGPNEAGKSTLLAFLRSMLFGFEKRG 58 >gi|313633348|gb|EFS00193.1| DNA repair protein RecN [Listeria seeligeri FSL N1-067] gi|313638041|gb|EFS03320.1| DNA repair protein RecN [Listeria seeligeri FSL S4-171] Length = 563 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLSFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|313672574|ref|YP_004050685.1| hypothetical protein Calni_0610 [Calditerrivibrio nitroreducens DSM 19672] gi|312939330|gb|ADR18522.1| hypothetical protein Calni_0610 [Calditerrivibrio nitroreducens DSM 19672] Length = 1165 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 K + + I F+ + + D T + G+NG GK+++ +AI+ Sbjct: 5 KFKTYIDSVIIIGFKLYP-NCIFKLDDTFTSIFGKNGVGKTTILDAIQ 51 >gi|307247129|ref|ZP_07529181.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856378|gb|EFM88529.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 542 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQQIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|303251968|ref|ZP_07338139.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649398|gb|EFL79583.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 519 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQQIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|289434649|ref|YP_003464521.1| DNA repair protein RecN [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170893|emb|CBH27435.1| DNA repair protein RecN [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 563 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLSFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|288573533|ref|ZP_06391890.1| ATPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569274|gb|EFC90831.1| ATPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 420 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 L + +FR + + +EF + + + G N GK++L EA+ +L Sbjct: 2 LKKFCVQNFRVLLDEE-MEFGE-VNLFLGPNNCGKTTLIEAVHFL 44 >gi|223453046|gb|ACM89787.1| RecN [Cronobacter sakazakii] Length = 319 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 45 >gi|223453042|gb|ACM89785.1| RecN [Cronobacter sakazakii] gi|223453044|gb|ACM89786.1| RecN [Cronobacter sakazakii] Length = 310 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 45 >gi|223453038|gb|ACM89783.1| RecN [Cronobacter malonaticus] Length = 303 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 45 >gi|223453036|gb|ACM89782.1| RecN [Cronobacter malonaticus] Length = 293 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 45 >gi|223453034|gb|ACM89781.1| RecN [Cronobacter sakazakii] Length = 298 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 I+F +T + G+ G GKS +A+ G R GD ++ + + Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVRAGASR 45 >gi|190149415|ref|YP_001967940.1| ATP-dependent endonuclease of the OLD family [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307244955|ref|ZP_07527052.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249351|ref|ZP_07531345.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253908|ref|ZP_07535760.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258362|ref|ZP_07540103.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262732|ref|ZP_07544359.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914546|gb|ACE60798.1| predicted ATP-dependent endonuclease of the OLD family [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306854120|gb|EFM86328.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858645|gb|EFM90707.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306863112|gb|EFM95054.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867546|gb|EFM99393.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306871877|gb|EFN03594.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 519 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQQIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|165975600|ref|YP_001651193.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307256169|ref|ZP_07537956.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260601|ref|ZP_07542293.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|165875701|gb|ABY68749.1| predicted ATP-dependent endonuclease of the OLD family [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306865350|gb|EFM97246.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869678|gb|EFN01463.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 519 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQQIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|153868875|ref|ZP_01998607.1| ATP-binding protein [Beggiatoa sp. PS] gi|152074543|gb|EDN71386.1| ATP-binding protein [Beggiatoa sp. PS] Length = 115 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 ++ + I +F F + +F+D L I+ G+N GKS L Sbjct: 1 MRMEGLSIENFTLFG-KNQFKFSDGLNIIVGENDTGKSHLL 40 >gi|145632023|ref|ZP_01787770.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Haemophilus influenzae R3021] gi|144982312|gb|EDJ89906.1| putative ABC oligo/dipeptide transport, ATP-binding protein [Haemophilus influenzae R3021] Length = 614 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 K + K+ I I FRG EI + AD++T++ G+NG KS++ I F Sbjct: 61 KALTKIKRIYIKSFRGLKEID-LSIADNITLIAGRNGTCKSTILGIIAQCF 110 >gi|86608260|ref|YP_477022.1| DNA repair protein RecN [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556802|gb|ABD01759.1| DNA repair protein RecN [Synechococcus sp. JA-2-3B'a(2-13)] Length = 568 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 L + I +F E +I F L ++ G+ G GKS + +A++ G T R Sbjct: 2 LRLLRIENF-ALIEQLEIPFRAGLNVLTGETGAGKSIILDALDAALGG-TARALR 54 >gi|32034539|ref|ZP_00134703.1| COG3593: Predicted ATP-dependent endonuclease of the OLD family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207632|ref|YP_001052857.1| ATP-dependent endonuclease [Actinobacillus pleuropneumoniae L20] gi|126096424|gb|ABN73252.1| predicted ATP-dependent endonuclease of the OLD family [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 519 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF---YGYTQRRKH 83 L IEIS FRG + + ++ ++ G+N +GKSSL +A+ +F Q + Sbjct: 1 MYLQQIEISGFRGINHL-SLTLRPNMVLI-GENAWGKSSLLDALSHIFNVKDELYQFSEQ 58 Query: 84 GDSIKKRSIKTPMPMC 99 ++ P+ +C Sbjct: 59 DFHLRDHQQAQPIKLC 74 >gi|302668890|ref|YP_003832715.1| RecF/RecN/SMC N terminal domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302397230|gb|ADL36133.1| RecF/RecN/SMC N terminal domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 1088 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 I++ ++ F ++ + ++ G+NG GKS+ +AI +L G TQ Sbjct: 9 KGIKLINWAQFFNPGTMKI-EGSALITGRNGTGKSTTLDAITYLLTGNTQ 57 >gi|262374015|ref|ZP_06067292.1| DNA repair protein RecN [Acinetobacter junii SH205] gi|262311026|gb|EEY92113.1| DNA repair protein RecN [Acinetobacter junii SH205] Length = 557 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 F L + + +F + ++ ++ G+ G GKS L +A+ T Sbjct: 4 FMLTHLTLINF-ALADHLALDIEQGFNVLTGETGAGKSLLLDALSACLGERT 54 >gi|262379994|ref|ZP_06073149.1| DNA repair protein RecN [Acinetobacter radioresistens SH164] gi|262298188|gb|EEY86102.1| DNA repair protein RecN [Acinetobacter radioresistens SH164] Length = 557 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 F L + + +F + ++ ++ G+ G GKS L +A+ T Sbjct: 4 FMLTHLTLINF-ALADHLALDIEQGFNVLTGETGAGKSLLLDALSACLGERT 54 >gi|283796587|ref|ZP_06345740.1| hypothetical protein CLOM621_06518 [Clostridium sp. M62/1] gi|291076000|gb|EFE13364.1| hypothetical protein CLOM621_06518 [Clostridium sp. M62/1] Length = 668 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG- 84 L++I I +++ + F + +T + G+NG GKS++ A+ + + R + Sbjct: 1 MSLVEISIKNYKSISSCV---FRLNGVTALLGENGTGKSNILSAVRYFYDNLISRSESDE 57 Query: 85 --DSIKKRSIKTPMPMCMAVPRCK 106 D + + + + + + R K Sbjct: 58 IFDHNNRLNNRVEIALTYDLGRLK 81 >gi|197121184|ref|YP_002133135.1| DNA repair protein RecN [Anaeromyxobacter sp. K] gi|196171033|gb|ACG72006.1| DNA repair protein RecN [Anaeromyxobacter sp. K] Length = 606 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS + ++ F L ++ G+ G GKS L A+ + G Sbjct: 2 LTTLRISGL-AVVDAVEVRFGPGLNVLTGETGAGKSILVNALHLVLGG 48 >gi|220915885|ref|YP_002491189.1| DNA repair protein RecN [Anaeromyxobacter dehalogenans 2CP-1] gi|219953739|gb|ACL64123.1| DNA repair protein RecN [Anaeromyxobacter dehalogenans 2CP-1] Length = 606 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS + ++ F L ++ G+ G GKS L A+ + G Sbjct: 2 LTTLRISGL-AVVDAVEVRFGPGLNVLTGETGAGKSILVNALHLVLGG 48 >gi|90416140|ref|ZP_01224072.1| DNA repair protein RecN [marine gamma proteobacterium HTCC2207] gi|90331865|gb|EAS47079.1| DNA repair protein RecN [marine gamma proteobacterium HTCC2207] Length = 558 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL I I+++ E +IEFA T + G+ G GKS + +A+ Sbjct: 2 LLSIHINNY-TLVESLEIEFASGTTAITGETGAGKSLVLDALGMALG 47 >gi|86157159|ref|YP_463944.1| DNA repair protein RecN [Anaeromyxobacter dehalogenans 2CP-C] gi|85773670|gb|ABC80507.1| DNA replication and repair protein RecN [Anaeromyxobacter dehalogenans 2CP-C] Length = 606 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + IS + ++ F L ++ G+ G GKS L A+ + G Sbjct: 2 LTTLRISGL-AVVDAVEVRFGPGLNVLTGETGAGKSILVNALHLVLGG 48 >gi|50310839|ref|XP_455442.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644578|emb|CAG98150.1| KLLA0F07997p [Kluyveromyces lactis] Length = 1119 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 ++ +++++F + + + + L ++ G NG GKS+ AI G + ++ Sbjct: 60 VVKLKLTNFVTYA-LTEFHLSPSLNMIIGPNGSGKSTFVCAICLGLAGKPEYIGRSKKVE 118 Query: 89 K 89 + Sbjct: 119 E 119 >gi|20091195|ref|NP_617270.1| hypothetical protein MA2362 [Methanosarcina acetivorans C2A] gi|19916306|gb|AAM05750.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 1300 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +R+ K+ I I F F+ + L I+ G N GKS+L I +F+G Sbjct: 5 SRRKTMKIDAIHIDGFGKFSRLSVENLPSGLVILTGANEAGKSTLFTFIRRMFFG 59 >gi|294677656|ref|YP_003578271.1| exonuclease SbcCD subunit C [Rhodobacter capsulatus SB 1003] gi|17433203|sp|O68032|SBCC_RHOCA RecName: Full=Nuclease sbcCD subunit C gi|3128266|gb|AAC16118.1| potential exonuclease [Rhodobacter capsulatus SB 1003] gi|294476476|gb|ADE85864.1| exonuclease SbcCD, C subunit [Rhodobacter capsulatus SB 1003] Length = 1238 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++L I + +I+F L + G+ G GKSS+ +A+ YG R Sbjct: 1 MRILSISGQNIASLAAPFRIDFTTAPLAGAGLFAITGETGAGKSSILDAMCLALYGDAPR 60 >gi|325271471|ref|ZP_08137992.1| hypothetical protein G1E_01626 [Pseudomonas sp. TJI-51] gi|324103395|gb|EGC00721.1| hypothetical protein G1E_01626 [Pseudomonas sp. TJI-51] Length = 435 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADH-----LTIVNGQNGYGKSSLSEAIEWLFY 75 + L I+ S+ RGF + + F + T+ G NG+GK+++ AI Sbjct: 1 MALYLSSIQFSNIRGFKDF-SLSFEEGKKHRQWTVFIGDNGHGKTTILRAIALGLG 55 >gi|300214354|gb|ADJ78770.1| DNA repair protein [Lactobacillus salivarius CECT 5713] Length = 555 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F + +I F +T++ G+ G GKS + +A+ L G R + I+ Sbjct: 2 LQELSIKDF-AIIDEIQISFQPKMTVLTGETGAGKSIIIDALGLLAGG----RGSTEFIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 K K + +PR Sbjct: 57 KGEKKAVIQGLFTLPR 72 >gi|182623948|ref|ZP_02951736.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|177910841|gb|EDT73195.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] Length = 922 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R ++ Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVDNKRGKK-TLS 60 Query: 89 KRSIKTPM 96 R+ TP+ Sbjct: 61 DRAKYTPL 68 >gi|124515132|gb|EAY56643.1| conserved protein of unknown function [Leptospirillum rubarum] gi|206603705|gb|EDZ40185.1| Conserved protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 657 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 KL I +++FR + + + + + G+N GK+++ +A+ Sbjct: 1 MKLTKIHVTNFRSVEDSGEFDLG-QVLCLVGKNEAGKTAILQAL 43 >gi|119871828|ref|YP_929835.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] gi|119673236|gb|ABL87492.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] Length = 234 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F +T V G NG GKS+L +AI + Y R GD Sbjct: 25 FPGEITAVLGPNGSGKSTLLKAIFGIARVYNGRIYIGD 62 >gi|90961515|ref|YP_535431.1| DNA repair protein [Lactobacillus salivarius UCC118] gi|227890602|ref|ZP_04008407.1| DNA repair protein [Lactobacillus salivarius ATCC 11741] gi|301300974|ref|ZP_07207139.1| DNA repair protein RecN [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820709|gb|ABD99348.1| DNA repair protein [Lactobacillus salivarius UCC118] gi|227867540|gb|EEJ74961.1| DNA repair protein [Lactobacillus salivarius ATCC 11741] gi|300851441|gb|EFK79160.1| DNA repair protein RecN [Lactobacillus salivarius ACS-116-V-Col5a] Length = 555 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I F + +I F +T++ G+ G GKS + +A+ L G R + I+ Sbjct: 2 LQELSIKDF-AIIDEIQISFQPKMTVLTGETGAGKSIIIDALGLLAGG----RGSTEFIR 56 Query: 89 KRSIKTPMPMCMAVPR 104 K K + +PR Sbjct: 57 KGEKKAVIQGLFTLPR 72 >gi|58581651|ref|YP_200667.1| recombination protein N [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426245|gb|AAW75282.1| recombination protein N [Xanthomonas oryzae pv. oryzae KACC10331] Length = 600 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQ 79 A L L + I F ++EF +T+V+G+ G GKS + +A+ +L + Sbjct: 41 AFTLDLMLRHLSIKDF-AVVRATELEFGPGMTVVSGETGTGKSLMVDALGFLSGLRADSG 99 Query: 80 RRKHGDSIKKRSIKTPMP 97 +HG + S + +P Sbjct: 100 VVRHGADRAELSAEFQLP 117 >gi|18311890|ref|NP_558557.1| ABC transporter, ATP-binding protein [Pyrobaculum aerophilum str. IM2] gi|18159305|gb|AAL62739.1| ABC transporter, ATP-binding protein [Pyrobaculum aerophilum str. IM2] Length = 221 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 39 GFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 F K F + +T V G NG GK++L Sbjct: 25 SFQLRAKGVFKEGVTCVVGPNGSGKTTLL 53 >gi|149926213|ref|ZP_01914475.1| DNA repair protein [Limnobacter sp. MED105] gi|149825031|gb|EDM84243.1| DNA repair protein [Limnobacter sp. MED105] Length = 551 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I F + + FA +++++G+ G GKS L +A+ + + + Sbjct: 2 LSSLTIQDF-VIVDKLDLHFAPGMSVLSGETGAGKSILIDALSLCLGARADASQVREGCE 60 Query: 89 KRSIKTPMPMCMA 101 + +I + A Sbjct: 61 RANITAVFELNPA 73 >gi|126664873|ref|ZP_01735857.1| DNA repair protein RecN [Marinobacter sp. ELB17] gi|126631199|gb|EBA01813.1| DNA repair protein RecN [Marinobacter sp. ELB17] Length = 558 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + +S++ E ++ F +T + G+ G GKS + +A+ G Sbjct: 2 LTQLTVSNY-AIAERVELHFHKGMTALTGETGAGKSIVLDALGLAMGG 48 >gi|254227048|ref|ZP_04920606.1| RecF/RecN/SMC N terminal domain, putative [Vibrio cholerae V51] gi|125620423|gb|EAZ48799.1| RecF/RecN/SMC N terminal domain, putative [Vibrio cholerae V51] Length = 367 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS-------EAIEWLFYGYTQR 80 K+ + I F+ + K++ ++L ++ G NG GKS+ E +E +T + Sbjct: 3 KIDRLTIQGFKSIRSLDKLQL-NNLNVLIGANGVGKSNFVSYFRMLHELVEGRLQVWTSK 61 Query: 81 RKHGDSIKKRSIKTPMPMCMAV 102 + D + +K + + Sbjct: 62 QGGADRVLSYGVKETQKLHTTI 83 >gi|145589954|ref|YP_001156551.1| DNA repair protein RecN [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048360|gb|ABP34987.1| DNA replication and repair protein RecN [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 556 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L I + F + +++F+ T++ G+ G GKS L +A+ + Sbjct: 2 LQTISLRDF-VIVDQLELDFSSGFTVLTGETGAGKSILLDALSLVLGE 48 >gi|91228539|ref|ZP_01262460.1| hypothetical protein V12G01_09512 [Vibrio alginolyticus 12G01] gi|91187915|gb|EAS74226.1| hypothetical protein V12G01_09512 [Vibrio alginolyticus 12G01] Length = 367 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS-------EAIEWLFYGYTQR 80 K+ + I F+ + K++ ++L ++ G NG GKS+ E +E +T + Sbjct: 3 KIDRLTIQGFKSIRSLDKLQL-NNLNVLIGANGVGKSNFVSYFRMLHELVEGRLQVWTSK 61 Query: 81 RKHGDSIKKRSIKTPMPMCMAV 102 + D + +K + + Sbjct: 62 QGGADRVLSYGVKETQKLHTTI 83 >gi|311104368|ref|YP_003977221.1| DNA repair protein RecN [Achromobacter xylosoxidans A8] gi|310759057|gb|ADP14506.1| DNA repair protein RecN [Achromobacter xylosoxidans A8] Length = 551 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E +I F ++ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQTEIHFGPGFSVFSGETGAGKSILVDALALALGE 48 >gi|303327504|ref|ZP_07357945.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302862444|gb|EFL85377.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 1339 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 23/57 (40%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I F F+ +Q L+I G+N GKS+ E + + GY R Sbjct: 1 MYIESFRIDGFGIFSGVQVENLPPGLSIFLGRNEAGKSTCLEFLRSMLTGYPDPRSR 57 >gi|284105049|ref|ZP_06386178.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] gi|283830172|gb|EFC34432.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] Length = 373 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 KL I I FR E +EF L ++ G NG GKS+L Sbjct: 3 KLNSIAIRGFRSVKEAT-LEF-RPLNVLIGANGAGKSNLI 40 >gi|290580918|ref|YP_003485310.1| DNA repair protein [Streptococcus mutans NN2025] gi|254997817|dbj|BAH88418.1| DNA repair protein [Streptococcus mutans NN2025] Length = 552 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEIAIKNF-AIIEEISLNFERGMTVLTGETGAGKSIVIDAMNMMLGS----RASIDVIR 56 Query: 89 KRSIKTPMP 97 S K + Sbjct: 57 HGSPKAEIE 65 >gi|251810490|ref|ZP_04824963.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875452|ref|ZP_06284323.1| hypothetical protein HMPREF0797_2066 [Staphylococcus epidermidis SK135] gi|251806094|gb|EES58751.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295479|gb|EFA88002.1| hypothetical protein HMPREF0797_2066 [Staphylococcus epidermidis SK135] gi|329732998|gb|EGG69339.1| hypothetical protein SEVCU028_1138 [Staphylococcus epidermidis VCU028] Length = 84 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 K+ I I +F G + Q EF + V G N GK++ + A++WL + Sbjct: 4 LKIKKISIENFAGL-KNQVFEFNGNDARVYGVNDTGKTTTATALQWLLF 51 >gi|89891613|ref|ZP_01203117.1| DNA repair protein RecN [Flavobacteria bacterium BBFL7] gi|89516160|gb|EAS18823.1| DNA repair protein RecN [Flavobacteria bacterium BBFL7] Length = 559 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +F + ++ + LT++ G+ G GKS L A+ + D+ + Sbjct: 2 LKHIHIENF-ALIDSLDLDLNNGLTMITGETGAGKSILLGALGLVQGKRADLSAVRDTTR 60 Query: 89 KRSIKTPMPM 98 K ++ + M Sbjct: 61 KCVVEAQIDM 70 >gi|24379063|ref|NP_721018.1| DNA repair protein RecN [Streptococcus mutans UA159] gi|24376960|gb|AAN58324.1|AE014902_12 DNA repair protein RecN [Streptococcus mutans UA159] Length = 552 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEIAIKNF-AIIEEISLNFERGMTVLTGETGAGKSIVIDAMNMMLGS----RASIDVIR 56 Query: 89 KRSIKTPMP 97 S K + Sbjct: 57 HGSPKAEIE 65 >gi|315657931|ref|ZP_07910805.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] gi|315496967|gb|EFU85288.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] Length = 977 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVHR-KIEFNRAFTEIYGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|300703267|ref|YP_003744869.1| hypothetical protein RCFBP_10935 [Ralstonia solanacearum CFBP2957] gi|299070930|emb|CBJ42236.1| protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 1152 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLT---IVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + +++ F F++ +EF T +V G N GKS+L AI L +G R H Sbjct: 1 MRFQRLDLLKFGKFSDR-SLEFPGSTTDFHLVVGPNEAGKSTLRAAILDLLFGIPVRSPH 59 Query: 84 G 84 G Sbjct: 60 G 60 >gi|289550441|ref|YP_003471345.1| DNA double-strand break repair rad50 ATPase [Staphylococcus lugdunensis HKU09-01] gi|289179973|gb|ADC87218.1| DNA double-strand break repair rad50 ATPase [Staphylococcus lugdunensis HKU09-01] Length = 977 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVHR-KIEFNRAFTEIYGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|312109710|ref|YP_003988026.1| ATPase AAA [Geobacillus sp. Y4.1MC1] gi|311214811|gb|ADP73415.1| AAA ATPase [Geobacillus sp. Y4.1MC1] Length = 561 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + I I FR EI K + A+ +T++ G NG GKS++ Sbjct: 9 IKSIYIKKFRKLKEI-KFDIAERITVIAGHNGIGKSTIL 46 >gi|254578968|ref|XP_002495470.1| ZYRO0B12122p [Zygosaccharomyces rouxii] gi|238938360|emb|CAR26537.1| ZYRO0B12122p [Zygosaccharomyces rouxii] Length = 1109 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + + + +F E ++E L + G NG GKS++ AI G+S+ Sbjct: 74 YIKKVVLWNFMCH-EHFELELGPRLNFIVGNNGSGKSAILTAITVGLGARAMDTNRGNSL 132 Query: 88 KKR 90 K Sbjct: 133 KDL 135 >gi|146304821|ref|YP_001192137.1| ATPase-like protein [Metallosphaera sedula DSM 5348] gi|145703071|gb|ABP96213.1| ATPase-like protein [Metallosphaera sedula DSM 5348] Length = 497 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 9/82 (10%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT---QRR 81 ++ +L + ++FR ++ + ++ G NGYGK++L AI + ++R Sbjct: 2 ILLRLAEFYANNFRSLESVELRDVG-GFNVIVGFNGYGKTNLLTAIYLYIKNLSAGIEKR 60 Query: 82 KHGDS-----IKKRSIKTPMPM 98 D + S T P+ Sbjct: 61 SIEDKNQEYLLMWNSYDTSKPI 82 >gi|329957035|ref|ZP_08297603.1| DNA replication and repair protein RecF [Bacteroides clarus YIT 12056] gi|328523792|gb|EGF50884.1| DNA replication and repair protein RecF [Bacteroides clarus YIT 12056] Length = 422 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 47 LKRISILNYKNL-EQVELAFSPKLNTFFGQNGMGKTNLLDAVYFLSFCKSA 96 >gi|298373693|ref|ZP_06983682.1| DNA repair protein RecN [Bacteroidetes oral taxon 274 str. F0058] gi|298274745|gb|EFI16297.1| DNA repair protein RecN [Bacteroidetes oral taxon 274 str. F0058] Length = 553 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +++I ++ E I+F D L+++ G+ G GKS + A+ + Sbjct: 2 LKNLKIENY-ALIEHLDIDFTDGLSVITGETGAGKSIIIGALSLVLG 47 >gi|159901784|ref|YP_001548029.1| hypothetical protein Haur_5274 [Herpetosiphon aurantiacus ATCC 23779] gi|159894823|gb|ABX07901.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC 23779] Length = 519 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLF 74 +L I H+R +Q I+F + + + GQNG GKS+L +AI ++ Sbjct: 1 MRLHHCTIGHYRVLRNLQ-IKFNNTDNERLGIDFLVGQNGSGKSTLLQAITFII 53 >gi|331701504|ref|YP_004398463.1| DNA repair protein RecN [Lactobacillus buchneri NRRL B-30929] gi|329128847|gb|AEB73400.1| DNA repair protein RecN [Lactobacillus buchneri NRRL B-30929] Length = 567 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 LL++ I+ F E I+F +T++ G+ G GKS + +A+ L G Sbjct: 2 LLELSITDF-AIIEHLDIDFQAGMTVLTGETGAGKSIIIDAVGLLVGG 48 >gi|310816786|ref|YP_003964750.1| molybdate ABC transporter, ATP-binding protein [Ketogulonicigenium vulgare Y25] gi|308755521|gb|ADO43450.1| molybdate ABC transporter, ATP-binding protein [Ketogulonicigenium vulgare Y25] Length = 355 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 29 LLDIEISH-FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++D+ + H F GF +T + G++G GK+S+ A+ L + + R GD++ Sbjct: 1 MIDVSLRHDFGGFKLDLDFRTGAGVTALFGRSGAGKTSIINAVAGLMHPQSGRIAIGDAV 60 Query: 88 KKRSIK 93 S K Sbjct: 61 LFDSAK 66 >gi|299537771|ref|ZP_07051060.1| DNA repair protein recN [Lysinibacillus fusiformis ZC1] gi|298726750|gb|EFI67336.1| DNA repair protein recN [Lysinibacillus fusiformis ZC1] Length = 563 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + LT++ G+ G GKS + +A+ L G R + + I+ Sbjct: 2 LRELSIRNF-AIIEDLTVSFLEGLTVLTGETGAGKSIIIDAVHLLAGG----RGNTEFIR 56 Query: 89 KRSIKTPM 96 + K + Sbjct: 57 HGARKAEL 64 >gi|298246029|ref|ZP_06969835.1| DNA replication and repair protein RecF [Ktedonobacter racemifer DSM 44963] gi|297553510|gb|EFH87375.1| DNA replication and repair protein RecF [Ktedonobacter racemifer DSM 44963] Length = 401 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +FR + + + L G+N GK++L EA+ L + Sbjct: 1 MYLTHLTLEYFRNYKHLD-LTLGPGLFFFCGENAQGKTNLLEAVSMLATATS 51 >gi|297199750|ref|ZP_06917147.1| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC 29083] gi|297147489|gb|EDY61131.2| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC 29083] Length = 674 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Query: 32 IEISHF-RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +E+S+ +GF + I+ F + + V G NG GK++L + I+ L + K G Sbjct: 322 VEVSNLTKGFGDKVLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMIQGLEEPDSGTIKVG 381 Query: 85 DSIKKRSIKTPM 96 D++K + Sbjct: 382 DTVKISYVDQSR 393 >gi|262067051|ref|ZP_06026663.1| iron compound ABC transporter, ATP-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291379260|gb|EFE86778.1| iron compound ABC transporter, ATP-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 258 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 14/91 (15%) Query: 15 KSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS-EAIEWL 73 K L Y +K + K L ++I +I KI T + G NG GKS+L+ I+++ Sbjct: 7 KKLNYSYGKKEVLKELSLDI-------DINKI------TGIIGPNGCGKSTLAKNIIKYI 53 Query: 74 FYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 + + I++ S K + +P+ Sbjct: 54 NGDFEDFKIMDTDIRELSHKKVAQLISYIPQ 84 >gi|258614788|ref|ZP_05712558.1| hypothetical protein EfaeD_03667 [Enterococcus faecium DO] Length = 746 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGD 85 K+L IEI+ F + + +F ++ G N GKS++ + I+ + +G+ + RK D Sbjct: 1 MKILRIEIAAFGKWRQK-SFDFYSGNQLIYGGNEAGKSTIYQFIQAILFGFPSKGRKKKD 59 Query: 86 SIKKRSI--------KTPMPMCMAVPRCKYQ 108 K K P+ AV R K Q Sbjct: 60 YTPKDGSAYGGKIWLKHPVYGEFAVERYKQQ 90 >gi|288574871|ref|ZP_06393228.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570612|gb|EFC92169.1| SMC domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 554 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + ++ I H G E ++F+ LT + G++G GKSS+ A+E + +R S+ Sbjct: 2 IEELHIRHIGGIRE-SHLQFSSGLTAITGESGAGKSSVVRALELA----SGKRA-SSSMI 55 Query: 89 KRSIKT 94 + + Sbjct: 56 RSGSDS 61 >gi|146340944|ref|YP_001205992.1| putative ATP-binding protein [Bradyrhizobium sp. ORS278] gi|146193750|emb|CAL77767.1| conserved hypothetical protein; putative ATP-binding protein [Bradyrhizobium sp. ORS278] Length = 256 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 + ++ F +TI+ G+NG GKS+L E I GY + + Sbjct: 40 DEFELGFTSAITIIVGENGTGKSTLLEGIA-ALAGYDEAGGGKGYM 84 >gi|116333609|ref|YP_795136.1| DNA repair ATPase [Lactobacillus brevis ATCC 367] gi|116098956|gb|ABJ64105.1| DNA repair ATPase [Lactobacillus brevis ATCC 367] Length = 564 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F + + F + +T++ G+ G GKS + +A+ L G Sbjct: 2 LQELSIKNF-AIIDHLDVTFKNGMTVLTGETGAGKSIIIDAVGLLAGG 48 >gi|302387302|ref|YP_003823124.1| SMC domain protein [Clostridium saccharolyticum WM1] gi|302197930|gb|ADL05501.1| SMC domain protein [Clostridium saccharolyticum WM1] Length = 1127 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L I ++++ + + + F + G +G GKS++ +A++ L Y T R Sbjct: 9 LSRILLNNWH-YITRKTLSFHQEINFFTGHSGSGKSTVIDAMQILLYANTDGRG 61 >gi|295092373|emb|CBK78480.1| hypothetical protein [Clostridium cf. saccharolyticum K10] Length = 1105 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 26 IFKLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + ++ GF+ + I F T++ G+NG GKS + +AI++ YG T K Sbjct: 1 MILLKKVRLINWYGFSNVTAPIGF---FTLIAGKNGNGKSVMLDAIKYAAYGDTVFNKSS 57 Query: 85 DS 86 +S Sbjct: 58 ES 59 >gi|259047375|ref|ZP_05737776.1| ABC superfamily ATP binding cassette transporter, ABC protein [Granulicatella adiacens ATCC 49175] gi|259035997|gb|EEW37252.1| ABC superfamily ATP binding cassette transporter, ABC protein [Granulicatella adiacens ATCC 49175] Length = 513 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 18 TSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAIEWLFYG 76 TS + IF+ D+ I + R T +E I + G NG GK++L +++ + Sbjct: 317 TSRAPGRYIFQAEDLVIGYDRPLTGHVNLEMERGQKIAIVGANGIGKTTLLKSLLGIIKP 376 Query: 77 YTQRRKHGDSIKKRSIKTPMP 97 + GD I + P Sbjct: 377 LNGKVTRGDYIDLGYFEQETP 397 >gi|291287801|ref|YP_003504617.1| DNA repair protein RecN [Denitrovibrio acetiphilus DSM 12809] gi|290884961|gb|ADD68661.1| DNA repair protein RecN [Denitrovibrio acetiphilus DSM 12809] Length = 550 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 E +EF L I+ G+ G GKS A+ + R D KK ++ Sbjct: 14 ESVTVEFDKGLNIITGETGAGKSVFIGALNLVLGARFNRALFRDPEKKLVVEAE 67 >gi|223453040|gb|ACM89784.1| RecN [Cronobacter sakazakii] Length = 268 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 I+F +T + G+ G GKS +A+ G R GD ++ Sbjct: 2 IDFNAGMTAITGETGAGKSIAIDALGLCLGG----RAEGDMVR 40 >gi|254389319|ref|ZP_05004547.1| AAA ATPase [Streptomyces clavuligerus ATCC 27064] gi|294817002|ref|ZP_06775644.1| AAA ATPase [Streptomyces clavuligerus ATCC 27064] gi|326445934|ref|ZP_08220668.1| ATPase AAA [Streptomyces clavuligerus ATCC 27064] gi|197703034|gb|EDY48846.1| AAA ATPase [Streptomyces clavuligerus ATCC 27064] gi|294321817|gb|EFG03952.1| AAA ATPase [Streptomyces clavuligerus ATCC 27064] Length = 248 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKHG 84 F +T + G NG GKS+L EAI F YG R HG Sbjct: 39 FMRPVTFLVGDNGSGKSTLVEAIAESFKLDAYGGRLARVHG 79 >gi|153830733|ref|ZP_01983400.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873791|gb|EDL71926.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 283 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEI+ FRG + F D +T + G+N +GKSSL +A+ + Sbjct: 1 MHLERIEIAGFRGIR-RLSLTF-DEITTLIGENTWGKSSLLDALSVVL 46 >gi|307564560|ref|ZP_07627100.1| DNA repair protein RecN [Prevotella amnii CRIS 21A-A] gi|307346718|gb|EFN92015.1| DNA repair protein RecN [Prevotella amnii CRIS 21A-A] Length = 553 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F + I F +++ G+ G GKS + AI L + K Sbjct: 2 LKNLYIKNF-TLIDQLDISFHAGFSVITGETGAGKSIILGAIGLLLGNRADSKMIKSGEK 60 Query: 89 KRSIK 93 K I+ Sbjct: 61 KCVIE 65 >gi|296269213|ref|YP_003651845.1| ABC transporter-like protein [Thermobispora bispora DSM 43833] gi|296092000|gb|ADG87952.1| ABC transporter related protein [Thermobispora bispora DSM 43833] Length = 271 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%) Query: 51 HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 + G NG GKS+L +AI L + R G + + + + P+ Sbjct: 41 GWLAIIGPNGAGKSTLLKAIAGLIGRTGEVRVAGTPVDRLRHRQRARLIAYAPQ 94 >gi|295115802|emb|CBL36649.1| hypothetical protein [butyrate-producing bacterium SM4/1] Length = 1105 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 26 IFKLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + ++ GF+ + I F T++ G+NG GKS + +AI++ YG T K Sbjct: 1 MILLKKVRLINWYGFSNVTAPIGF---FTLIAGKNGNGKSVMLDAIKYAAYGDTVFNKSS 57 Query: 85 DS 86 +S Sbjct: 58 ES 59 >gi|288573749|ref|ZP_06392106.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569490|gb|EFC91047.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 70 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I I F+ +++ +E +D T + G NG GKS++ +AI+++ G R K D + Sbjct: 2 IKSISIKKFKSLVDME-LELSD-FTCLIGVNGSGKSTVLQAIDFI--GQMMRGKLSDWAE 57 Query: 89 KRSIK 93 R K Sbjct: 58 SRRWK 62 >gi|300361957|ref|ZP_07058134.1| DNA repair protein RecN [Lactobacillus gasseri JV-V03] gi|300354576|gb|EFJ70447.1| DNA repair protein RecN [Lactobacillus gasseri JV-V03] Length = 562 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q + + Sbjct: 5 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ-----NEMI 58 Query: 89 KRSIK 93 + K Sbjct: 59 RSGEK 63 >gi|283797271|ref|ZP_06346424.1| hypothetical protein CLOM621_07263 [Clostridium sp. M62/1] gi|291075123|gb|EFE12487.1| hypothetical protein CLOM621_07263 [Clostridium sp. M62/1] Length = 1105 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 26 IFKLLDIEISHFRGFTEIQK-IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + L + + ++ GF+ + I F T++ G+NG GKS + +AI++ YG T K Sbjct: 1 MILLKKVRLINWYGFSNVTAPIGF---FTLIAGKNGNGKSVMLDAIKYAAYGDTVFNKSS 57 Query: 85 DS 86 +S Sbjct: 58 ES 59 >gi|150864658|ref|XP_001383583.2| Protein involved in recombination repair [Scheffersomyces stipitis CBS 6054] gi|149385914|gb|ABN65554.2| Protein involved in recombination repair [Scheffersomyces stipitis CBS 6054] Length = 1063 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F + ++E + + G+NG GKS++ I G SIK Sbjct: 42 IERISLKNFMCH-DSFELELGPQINFIIGRNGSGKSAILTGISVGLGAKASDTNRGTSIK 100 >gi|126463976|ref|YP_001045089.1| hypothetical protein Rsph17029_3220 [Rhodobacter sphaeroides ATCC 17029] gi|126105787|gb|ABN78317.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] Length = 429 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +++ +F+ + + KI+ +T++ G N GKS+L +++ Sbjct: 3 TSLQLRNFKAWVDSGKIDLKP-VTMLLGTNSSGKSTLIQSL 42 >gi|296115365|ref|ZP_06834003.1| hypothetical protein GXY_06278 [Gluconacetobacter hansenii ATCC 23769] gi|295978103|gb|EFG84843.1| hypothetical protein GXY_06278 [Gluconacetobacter hansenii ATCC 23769] Length = 1180 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 E +T+ G NG GK+SL ++ W G R + Sbjct: 2 FEPTSPITVFEGWNGSGKTSLMNSVIWCLTGKLLRPQR 39 >gi|284167204|ref|YP_003405482.1| chromosome segregation ATPase-like protein [Haloterrigena turkmenica DSM 5511] gi|284016859|gb|ADB62809.1| Chromosome segregation ATPase-like protein [Haloterrigena turkmenica DSM 5511] Length = 601 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Query: 31 DIEISHFRGFTE-IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 +IEI + G + IE L V G N GKSS EAI+ T+ ++ DS + Sbjct: 4 NIEIENIAGILDGETTIE--PGLNAVRGSNWQGKSSFIEAIKTALGTSTELTENEDS-GR 60 Query: 90 RSIKTP 95 ++TP Sbjct: 61 VQLRTP 66 >gi|10954531|ref|NP_044170.1| hypothetical protein MJECL44 [Methanocaldococcus jannaschii DSM 2661] gi|2496242|sp|Q60299|Y3544_METJA RecName: Full=Uncharacterized protein MJECL44 gi|1522677|gb|AAC37113.1| hypothetical protein MJ_ECL44 [Methanocaldococcus jannaschii DSM 2661] Length = 331 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + I +FR D + + G N GKS++ +A+ W T + GD Sbjct: 14 LHLTKVTIRNFRSIKVAHINNIGD-IAVFVGANESGKSNILKALNWF---GTDKPLGGDD 69 Query: 87 I 87 I Sbjct: 70 I 70 >gi|323144680|ref|ZP_08079265.1| DNA repair protein RecN [Succinatimonas hippei YIT 12066] gi|322415576|gb|EFY06325.1| DNA repair protein RecN [Succinatimonas hippei YIT 12066] Length = 556 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I+F + V G+ G GKS + +A+ G + Sbjct: 18 IDFERGMIAVTGETGAGKSLIIDALSLALGGKSSSSM 54 >gi|159044070|ref|YP_001532864.1| putative high-affinity branched-chain amino acid transport ATP-binding protein [Dinoroseobacter shibae DFL 12] gi|157911830|gb|ABV93263.1| putative high-affinity branched-chain amino acid transport ATP-binding protein [Dinoroseobacter shibae DFL 12] Length = 260 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 26 IFKLLDIEISHFRGFT--EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + K+ ++ HF GF + +E A+ +T + G NG GK++L I + + Sbjct: 1 MIKVENLH-KHFGGFRAVDGATLEIAEGSITGLVGPNGAGKTTLFNVIAGNLQPTSGK 57 >gi|114330780|ref|YP_747002.1| DNA repair protein RecN [Nitrosomonas eutropha C91] gi|114307794|gb|ABI59037.1| DNA replication and repair protein RecN [Nitrosomonas eutropha C91] Length = 553 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ I +F + + F T++ G+ G GKS L +A+E + Sbjct: 2 LQNLSIQNF-VIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLG 47 >gi|329734270|gb|EGG70585.1| hypothetical protein SEVCU045_2342 [Staphylococcus epidermidis VCU045] Length = 461 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|329768050|ref|ZP_08259560.1| hypothetical protein HMPREF0428_01257 [Gemella haemolysans M341] gi|328838318|gb|EGF87928.1| hypothetical protein HMPREF0428_01257 [Gemella haemolysans M341] Length = 456 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 26 IFKLLDIEIS-HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 I +L + IS + + +T + G NG GK++L AI Sbjct: 239 ILRLENFRISQGNKKLLNTTDFKIHKGITTLTGDNGTGKTTLLHAI 284 >gi|295095266|emb|CBK84356.1| Predicted ATPase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 362 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + ++ I ++R ++ +E + L IV G NG GKS++ +AI Sbjct: 2 IKNLHIQNYRSIRDM-SLEL-EQLNIVFGPNGTGKSNIYKAI 41 >gi|293115417|ref|ZP_05791371.2| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] gi|292810187|gb|EFF69392.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] Length = 626 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++ I IS+F+ + +I+ ++ I+ GQN GKS++ +AI + Y + Sbjct: 1 MMRIEYIRISNFKSI-DNLEIKDIENALILVGQNNTGKSTVIDAIRAVCGDYKIQ 54 >gi|254561347|ref|YP_003068442.1| hypothetical protein METDI2929 [Methylobacterium extorquens DM4] gi|254268625|emb|CAX24584.1| hypothetical protein METDI2929 [Methylobacterium extorquens DM4] Length = 1159 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|240138747|ref|YP_002963219.1| hypothetical protein MexAM1_META1p2147 [Methylobacterium extorquens AM1] gi|240008716|gb|ACS39942.1| hypothetical protein MexAM1_META1p2147 [Methylobacterium extorquens AM1] Length = 1159 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|225620628|ref|YP_002721886.1| abortive infection protein [Brachyspira hyodysenteriae WA1] gi|225215448|gb|ACN84182.1| abortive infection protein [Brachyspira hyodysenteriae WA1] Length = 400 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 21/83 (25%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLT--------------------IVNGQNGYGKSSLSE 68 L I IS++R F + ++ + ++ G NG GKS+L Sbjct: 2 LKKITISNYRSFYDEAVLDLTIDIAKEKECRFIKKINDEYISKLCLLYGYNGSGKSNLIN 61 Query: 69 AIEWLFYGYTQR-RKHGDSIKKR 90 A++++ Y DSIKK Sbjct: 62 ALKFILYSNNGYITSSDDSIKKL 84 >gi|226330756|ref|ZP_03806274.1| hypothetical protein PROPEN_04676 [Proteus penneri ATCC 35198] gi|225201551|gb|EEG83905.1| hypothetical protein PROPEN_04676 [Proteus penneri ATCC 35198] Length = 508 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFY 75 L +EI FRG ++ + T++ G+N +GKSSL +A+ Sbjct: 1 MYLERVEIVGFRGLN---RLSLPLDMNTVLVGENAWGKSSLLDALTLSLG 47 >gi|212709685|ref|ZP_03317813.1| hypothetical protein PROVALCAL_00733 [Providencia alcalifaciens DSM 30120] gi|212687496|gb|EEB47024.1| hypothetical protein PROVALCAL_00733 [Providencia alcalifaciens DSM 30120] Length = 554 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L +EI FRG +E ++ T++ G+N +GKSSL +A++ L Sbjct: 1 MYLERVEIYGFRGIN-RLSLELNNN-TVLIGENSWGKSSLLDALDILL 46 >gi|188581369|ref|YP_001924814.1| hypothetical protein Mpop_2117 [Methylobacterium populi BJ001] gi|179344867|gb|ACB80279.1| conserved hypothetical proteinn [Methylobacterium populi BJ001] Length = 1159 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|218530388|ref|YP_002421204.1| hypothetical protein Mchl_2434 [Methylobacterium chloromethanicum CM4] gi|218522691|gb|ACK83276.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 1159 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|163851579|ref|YP_001639622.1| hypothetical protein Mext_2156 [Methylobacterium extorquens PA1] gi|163663184|gb|ABY30551.1| conserved hypothetical proteinn [Methylobacterium extorquens PA1] Length = 1159 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|16119543|ref|NP_396249.1| ABC transporter, nucleotide binding/ATPase protein (iron-siderophore) [Agrobacterium tumefaciens str. C58] gi|15162095|gb|AAK90690.1| ABC transporter, nucleotide binding/ATPase protein (iron-siderophore) [Agrobacterium tumefaciens str. C58] Length = 281 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 28 KLLDIEISHF------RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFY 75 ++ +E+ + R E ++ D T++ G N GKS+L A+ L Sbjct: 8 RIERLEVQNATLRYNQRIIAEDLSVKIPDGSFTVIVGPNACGKSTLLRALSRLLT 62 >gi|70729229|ref|YP_258965.1| hypothetical protein PFL_1846 [Pseudomonas fluorescens Pf-5] gi|68343528|gb|AAY91134.1| hypothetical protein PFL_1846 [Pseudomonas fluorescens Pf-5] Length = 658 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAI 70 + + + +++ + I I ++ T + G+NG GKSS+ EA+ Sbjct: 2 IAGLFLRNYKTYQGINYIPISNGSFFTAIVGENGSGKSSVLEAL 45 >gi|23011366|ref|ZP_00051747.1| COG1196: Chromosome segregation ATPases [Magnetospirillum magnetotacticum MS-1] Length = 581 Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH-G 84 +++L DI IS++ ++I + G G GKS++ +A+ + G R Sbjct: 1 MYRLTDIAISNWYLIR-REQIRI-RGAAALVGPTGAGKSTIFDAVGTVLAGNNASRLALN 58 Query: 85 DSIKKRSIKTPMPMCMA 101 S RS +T C+ Sbjct: 59 ASASGRSARTVRDYCLG 75 >gi|329724886|gb|EGG61389.1| hypothetical protein SEVCU144_1155 [Staphylococcus epidermidis VCU144] Length = 461 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KIEF T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KIEFNRQFTEIFGENEAGKSTIQAFIHSILFGFPTKK 54 >gi|301024305|ref|ZP_07187995.1| hypothetical protein HMPREF9534_03826 [Escherichia coli MS 69-1] gi|300396630|gb|EFJ80168.1| hypothetical protein HMPREF9534_03826 [Escherichia coli MS 69-1] Length = 373 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 30 LDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 + I ++ E+ +E +T G NG GKS++++A+ + +G + +I+ Sbjct: 4 HPLIIKGYKSIAELSLVESPPFITF-AGANGAGKSNITDALAF--FGAVVKTGATQAIRD 60 Query: 90 RS 91 Sbjct: 61 FG 62 >gi|297616217|ref|YP_003701376.1| DNA replication and repair protein RecF [Syntrophothermus lipocalidus DSM 12680] gi|297144054|gb|ADI00811.1| DNA replication and repair protein RecF [Syntrophothermus lipocalidus DSM 12680] Length = 368 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+L +E FR IE + ++ G+N GK++L EAI + + + R Sbjct: 1 MKILKLETRFFRNLVSCV-IEPCSRINVILGKNAQGKTNLLEAIYVVGHNRSFRGARDKD 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 LVTHGRR 66 >gi|289450003|ref|YP_003475737.1| hypothetical protein HMPREF0868_1490 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184550|gb|ADC90975.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1104 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K I + F + I+ + ++ N GKS+L I +FYG ++ S Sbjct: 1 MKFRQIHVYGFGKLVD-TTIDLHPGMQVLYASNERGKSTLLAFIRAIFYGLGDKKNRDIS 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 NSRERYR 66 >gi|255731480|ref|XP_002550664.1| hypothetical protein CTRG_04962 [Candida tropicalis MYA-3404] gi|240131673|gb|EER31232.1| hypothetical protein CTRG_04962 [Candida tropicalis MYA-3404] Length = 1100 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + + + +F + ++E L + G+NG GKS++ I G SIK Sbjct: 78 IEKLSLKNFMCH-DSFELELGPQLNFIIGRNGSGKSAVLTGISVGLGAKATDTNRGSSIK 136 Query: 89 KR 90 Sbjct: 137 DL 138 >gi|237749287|ref|ZP_04579767.1| prophage Lp2 protein 4 [Oxalobacter formigenes OXCC13] gi|229380649|gb|EEO30740.1| prophage Lp2 protein 4 [Oxalobacter formigenes OXCC13] Length = 481 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + + IS FRGF+ + E + +T++ GQNG K++L Sbjct: 4 IQKVVISKFRGFS-NAEFEMGNQITVIAGQNGTQKTTLL 41 >gi|288575133|ref|ZP_06393490.1| ABC transporter related protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570874|gb|EFC92431.1| ABC transporter related protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 255 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---DSIKKRSIKTPMPMCMAVPRCKY 107 +T++ G NG GKS+L +AI L R +G +S+ +RS + +P Y Sbjct: 31 ITVLIGPNGSGKSTLLKAIAGLIDYDGSIRLNGVDLESMGRRSRAALFAVVDQIPSMNY 89 >gi|60115666|ref|YP_209457.1| putative RecF protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161867991|ref|YP_001598172.1| hypothetical protein pOU7519_130 [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|168239691|ref|ZP_02664749.1| RecF/RecN/SMC domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194733781|ref|YP_002112895.1| RecF/RecN/SMC domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|313116763|ref|YP_004032913.1| RecF/RecN/SMC domain protein [Edwardsiella tarda] gi|45758224|gb|AAS76436.1| putative RecF protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161087370|gb|ABX56840.1| RecF [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|194709283|gb|ACF88506.1| RecF/RecN/SMC domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287640|gb|EDY27032.1| RecF/RecN/SMC domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|312192400|gb|ADQ43886.1| RecF/RecN/SMC domain protein [Edwardsiella tarda] Length = 362 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + I ++R E+ +E + L IV G NG GKS++ +AI Sbjct: 2 ITTLHIQNYRSIREM-SLEL-EQLNIVFGPNGTGKSNIYKAI 41 >gi|331266232|ref|YP_004325862.1| DNA repair protein RecN [Streptococcus oralis Uo5] gi|326682904|emb|CBZ00521.1| DNA repair protein RecN [Streptococcus oralis Uo5] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|322376514|ref|ZP_08051007.1| DNA repair protein RecN [Streptococcus sp. M334] gi|321282321|gb|EFX59328.1| DNA repair protein RecN [Streptococcus sp. M334] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|322375368|ref|ZP_08049881.1| DNA repair protein RecN [Streptococcus sp. C300] gi|321279631|gb|EFX56671.1| DNA repair protein RecN [Streptococcus sp. C300] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|322387920|ref|ZP_08061527.1| DNA repair protein RecN [Streptococcus infantis ATCC 700779] gi|321141193|gb|EFX36691.1| DNA repair protein RecN [Streptococcus infantis ATCC 700779] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|315613294|ref|ZP_07888203.1| DNA repair protein RecN [Streptococcus sanguinis ATCC 49296] gi|315314529|gb|EFU62572.1| DNA repair protein RecN [Streptococcus sanguinis ATCC 49296] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|308185865|ref|YP_003929996.1| ATP-dependent dsDNA exonuclease [Pantoea vagans C9-1] gi|308056375|gb|ADO08547.1| ATP-dependent dsDNA exonuclease [Pantoea vagans C9-1] Length = 1224 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNALRGEWFIDFRAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|307704837|ref|ZP_07641731.1| DNA repair protein RecN [Streptococcus mitis SK597] gi|307621613|gb|EFO00656.1| DNA repair protein RecN [Streptococcus mitis SK597] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|307709370|ref|ZP_07645828.1| DNA repair protein RecN [Streptococcus mitis SK564] gi|307619953|gb|EFN99071.1| DNA repair protein RecN [Streptococcus mitis SK564] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|307706646|ref|ZP_07643453.1| DNA repair protein RecN [Streptococcus mitis SK321] gi|307618101|gb|EFN97261.1| DNA repair protein RecN [Streptococcus mitis SK321] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|307708725|ref|ZP_07645188.1| DNA repair protein RecN [Streptococcus mitis NCTC 12261] gi|307615299|gb|EFN94509.1| DNA repair protein RecN [Streptococcus mitis NCTC 12261] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|306825097|ref|ZP_07458439.1| DNA repair protein RecN [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432533|gb|EFM35507.1| DNA repair protein RecN [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|304395457|ref|ZP_07377340.1| SMC domain protein [Pantoea sp. aB] gi|304356751|gb|EFM21115.1| SMC domain protein [Pantoea sp. aB] Length = 1224 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNALRGEWFIDFRAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|303254299|ref|ZP_07340408.1| DNA repair protein RecN [Streptococcus pneumoniae BS455] gi|303258836|ref|ZP_07344815.1| DNA repair protein RecN [Streptococcus pneumoniae SP-BS293] gi|303261520|ref|ZP_07347467.1| DNA repair protein RecN [Streptococcus pneumoniae SP14-BS292] gi|303264190|ref|ZP_07350110.1| DNA repair protein RecN [Streptococcus pneumoniae BS397] gi|303266179|ref|ZP_07352072.1| DNA repair protein RecN [Streptococcus pneumoniae BS457] gi|303268094|ref|ZP_07353894.1| DNA repair protein RecN [Streptococcus pneumoniae BS458] gi|307127206|ref|YP_003879237.1| DNA repair protein RecN [Streptococcus pneumoniae 670-6B] gi|301801937|emb|CBW34662.1| putative DNA repair protein [Streptococcus pneumoniae INV200] gi|302598793|gb|EFL65830.1| DNA repair protein RecN [Streptococcus pneumoniae BS455] gi|302637100|gb|EFL67588.1| DNA repair protein RecN [Streptococcus pneumoniae SP14-BS292] gi|302639779|gb|EFL70235.1| DNA repair protein RecN [Streptococcus pneumoniae SP-BS293] gi|302642311|gb|EFL72658.1| DNA repair protein RecN [Streptococcus pneumoniae BS458] gi|302644349|gb|EFL74603.1| DNA repair protein RecN [Streptococcus pneumoniae BS457] gi|302646002|gb|EFL76229.1| DNA repair protein RecN [Streptococcus pneumoniae BS397] gi|306484268|gb|ADM91137.1| DNA repair protein RecN [Streptococcus pneumoniae 670-6B] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|293365581|ref|ZP_06612290.1| DNA repair protein RecN [Streptococcus oralis ATCC 35037] gi|307703535|ref|ZP_07640477.1| DNA repair protein RecN [Streptococcus oralis ATCC 35037] gi|291315949|gb|EFE56393.1| DNA repair protein RecN [Streptococcus oralis ATCC 35037] gi|307622942|gb|EFO01937.1| DNA repair protein RecN [Streptococcus oralis ATCC 35037] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLG 47 >gi|289167862|ref|YP_003446131.1| DNA repair protein RecN [Streptococcus mitis B6] gi|288907429|emb|CBJ22266.1| DNA repair protein RecN [Streptococcus mitis B6] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|270292611|ref|ZP_06198822.1| DNA repair protein RecN [Streptococcus sp. M143] gi|270278590|gb|EFA24436.1| DNA repair protein RecN [Streptococcus sp. M143] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|317047130|ref|YP_004114778.1| exonuclease SbcC [Pantoea sp. At-9b] gi|316948747|gb|ADU68222.1| exonuclease SbcC [Pantoea sp. At-9b] Length = 1179 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 27 FKLLDIEISHFRGFTEIQKIEF------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+L + + I+F ++ L + G G GK++L +AI Y T R Sbjct: 1 MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 >gi|255320700|ref|ZP_05361877.1| DNA replication, recombination and repair protein [Acinetobacter radioresistens SK82] gi|262380669|ref|ZP_06073822.1| recombinational DNA repair ATPase [Acinetobacter radioresistens SH164] gi|255302316|gb|EET81556.1| DNA replication, recombination and repair protein [Acinetobacter radioresistens SK82] gi|262297617|gb|EEY85533.1| recombinational DNA repair ATPase [Acinetobacter radioresistens SH164] Length = 360 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 10/79 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR------ 80 + + I R + + E + G NG GK+S+ EAI L G + R Sbjct: 1 MYITRLNIERVRNLSAVALSELQP-FNVFYGANGSGKTSILEAIHLLATGRSFRTYIPKH 59 Query: 81 ---RKHGDSIKKRSIKTPM 96 D+I T Sbjct: 60 YIQSGASDTIVFAQSATEK 78 >gi|225856875|ref|YP_002738386.1| DNA repair protein RecN [Streptococcus pneumoniae P1031] gi|225725654|gb|ACO21506.1| DNA repair protein RecN [Streptococcus pneumoniae P1031] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|225858987|ref|YP_002740497.1| DNA repair protein RecN [Streptococcus pneumoniae 70585] gi|225720044|gb|ACO15898.1| DNA repair protein RecN [Streptococcus pneumoniae 70585] gi|301794291|emb|CBW36715.1| putative DNA repair protein [Streptococcus pneumoniae INV104] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|182684068|ref|YP_001835815.1| DNA repair protein RecN [Streptococcus pneumoniae CGSP14] gi|221231903|ref|YP_002511055.1| DNA repair protein [Streptococcus pneumoniae ATCC 700669] gi|182629402|gb|ACB90350.1| DNA repair protein RecN [Streptococcus pneumoniae CGSP14] gi|220674363|emb|CAR68912.1| putative DNA repair protein [Streptococcus pneumoniae ATCC 700669] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|169833042|ref|YP_001694639.1| DNA repair protein RecN [Streptococcus pneumoniae Hungary19A-6] gi|168995544|gb|ACA36156.1| DNA repair protein RecN [Streptococcus pneumoniae Hungary19A-6] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|168493124|ref|ZP_02717267.1| DNA repair protein RecN [Streptococcus pneumoniae CDC3059-06] gi|225854674|ref|YP_002736186.1| DNA repair protein RecN [Streptococcus pneumoniae JJA] gi|183576669|gb|EDT97197.1| DNA repair protein RecN [Streptococcus pneumoniae CDC3059-06] gi|225724072|gb|ACO19925.1| DNA repair protein RecN [Streptococcus pneumoniae JJA] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|168486525|ref|ZP_02711033.1| DNA repair protein RecN [Streptococcus pneumoniae CDC1087-00] gi|183570466|gb|EDT90994.1| DNA repair protein RecN [Streptococcus pneumoniae CDC1087-00] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|168484954|ref|ZP_02709899.1| DNA repair protein RecN [Streptococcus pneumoniae CDC1873-00] gi|172041909|gb|EDT49955.1| DNA repair protein RecN [Streptococcus pneumoniae CDC1873-00] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|182419848|ref|ZP_02951088.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237666875|ref|ZP_04526860.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376396|gb|EDT73978.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237658074|gb|EEP55629.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 673 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 ++ I I +F G IEF + +V G+N GKSS+ I YG + Sbjct: 1 MRIKSICIINFAGLKNKM-IEFKEGFNLVYGENESGKSSIETFIRIWLYGIKEE 53 >gi|241114273|ref|YP_002973748.1| hypothetical protein Rpic12D_5278 [Ralstonia pickettii 12D] gi|240868846|gb|ACS66504.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 774 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Query: 27 FKLLDIEISHFRG-----FTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAI 70 + L + +S FRG + ++ + L V G NG GK+++ + + Sbjct: 1 MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNL 52 >gi|149019194|ref|ZP_01834556.1| DNA repair protein RecN [Streptococcus pneumoniae SP23-BS72] gi|147931064|gb|EDK82043.1| DNA repair protein RecN [Streptococcus pneumoniae SP23-BS72] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|148993812|ref|ZP_01823214.1| DNA repair protein RecN [Streptococcus pneumoniae SP9-BS68] gi|168489030|ref|ZP_02713229.1| DNA repair protein RecN [Streptococcus pneumoniae SP195] gi|147927637|gb|EDK78662.1| DNA repair protein RecN [Streptococcus pneumoniae SP9-BS68] gi|183572356|gb|EDT92884.1| DNA repair protein RecN [Streptococcus pneumoniae SP195] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|148985096|ref|ZP_01818335.1| DNA repair protein RecN [Streptococcus pneumoniae SP3-BS71] gi|225860959|ref|YP_002742468.1| DNA repair protein RecN [Streptococcus pneumoniae Taiwan19F-14] gi|298230889|ref|ZP_06964570.1| DNA repair protein RecN [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254300|ref|ZP_06977886.1| DNA repair protein RecN [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502799|ref|YP_003724739.1| DNA repair protein RecN [Streptococcus pneumoniae TCH8431/19A] gi|147922541|gb|EDK73659.1| DNA repair protein RecN [Streptococcus pneumoniae SP3-BS71] gi|225727073|gb|ACO22924.1| DNA repair protein RecN [Streptococcus pneumoniae Taiwan19F-14] gi|298238394|gb|ADI69525.1| DNA repair protein RecN [Streptococcus pneumoniae TCH8431/19A] gi|301800129|emb|CBW32733.1| putative DNA repair protein [Streptococcus pneumoniae OXC141] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|149008195|ref|ZP_01831700.1| DNA repair protein RecN [Streptococcus pneumoniae SP18-BS74] gi|147760376|gb|EDK67356.1| DNA repair protein RecN [Streptococcus pneumoniae SP18-BS74] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|149012253|ref|ZP_01833322.1| DNA repair protein RecN [Streptococcus pneumoniae SP19-BS75] gi|147763579|gb|EDK70514.1| DNA repair protein RecN [Streptococcus pneumoniae SP19-BS75] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|148998632|ref|ZP_01826071.1| DNA repair protein RecN [Streptococcus pneumoniae SP11-BS70] gi|168577218|ref|ZP_02723027.1| DNA repair protein RecN [Streptococcus pneumoniae MLV-016] gi|307067852|ref|YP_003876818.1| DNA repair ATPase [Streptococcus pneumoniae AP200] gi|147755469|gb|EDK62517.1| DNA repair protein RecN [Streptococcus pneumoniae SP11-BS70] gi|183577203|gb|EDT97731.1| DNA repair protein RecN [Streptococcus pneumoniae MLV-016] gi|306409389|gb|ADM84816.1| ATPase involved in DNA repair [Streptococcus pneumoniae AP200] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|153955850|ref|YP_001396615.1| ATP-dependent endonuclease [Clostridium kluyveri DSM 555] gi|219856210|ref|YP_002473332.1| hypothetical protein CKR_2867 [Clostridium kluyveri NBRC 12016] gi|146348708|gb|EDK35244.1| Predicted ATP-dependent endonuclease [Clostridium kluyveri DSM 555] gi|219569934|dbj|BAH07918.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 539 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 5/73 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVN-GQNGYGKSSLSEAIEWLFYG---YTQRRK 82 +L I I H+R E ++ + +V G N GKS++ AI + Sbjct: 1 MRLEAIVIKHYRSI-ERVALKLPPNKPLVLFGPNNAGKSNILSAINRILGERYPTYIEML 59 Query: 83 HGDSIKKRSIKTP 95 D K+ + P Sbjct: 60 ESDYFKRNQNEYP 72 >gi|187928720|ref|YP_001899207.1| putative DNA repair ATPase [Ralstonia pickettii 12J] gi|187725610|gb|ACD26775.1| putative ATPase involved in DNA repair [Ralstonia pickettii 12J] Length = 774 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Query: 27 FKLLDIEISHFRG-----FTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAI 70 + L + +S FRG + ++ + L V G NG GK+++ + + Sbjct: 1 MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNL 52 >gi|115386660|ref|XP_001209871.1| hypothetical protein ATEG_07185 [Aspergillus terreus NIH2624] gi|114190869|gb|EAU32569.1| hypothetical protein ATEG_07185 [Aspergillus terreus NIH2624] Length = 1190 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ I++++F +T + L +V G NG GKS+L AI Sbjct: 105 IVRIKVTNFVTYTSAEFFP-GPKLNMVIGPNGTGKSTLVCAI 145 >gi|27262512|gb|AAN87537.1| DNA repair protein RecN [Heliobacillus mobilis] Length = 562 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 L + + +F E ++E + + ++ G+ G GKS + +A+ L G + Sbjct: 2 LERLRVENF-ALIEEAELELSPGMNLLTGETGAGKSLIIDAVGLLIGGRS 50 >gi|15903127|ref|NP_358677.1| DNA repair protein RecN [Streptococcus pneumoniae R6] gi|116516837|ref|YP_816533.1| DNA repair protein RecN [Streptococcus pneumoniae D39] gi|148989221|ref|ZP_01820601.1| DNA repair protein RecN [Streptococcus pneumoniae SP6-BS73] gi|149002568|ref|ZP_01827500.1| DNA repair protein RecN [Streptococcus pneumoniae SP14-BS69] gi|168491123|ref|ZP_02715266.1| DNA repair protein RecN [Streptococcus pneumoniae CDC0288-04] gi|237649513|ref|ZP_04523765.1| DNA repair protein RecN [Streptococcus pneumoniae CCRI 1974] gi|237822545|ref|ZP_04598390.1| DNA repair protein RecN [Streptococcus pneumoniae CCRI 1974M2] gi|15458707|gb|AAK99887.1| DNA repair and genetic recombination [Streptococcus pneumoniae R6] gi|116077413|gb|ABJ55133.1| DNA repair protein RecN [Streptococcus pneumoniae D39] gi|147759179|gb|EDK66172.1| DNA repair protein RecN [Streptococcus pneumoniae SP14-BS69] gi|147925199|gb|EDK76278.1| DNA repair protein RecN [Streptococcus pneumoniae SP6-BS73] gi|183574375|gb|EDT94903.1| DNA repair protein RecN [Streptococcus pneumoniae CDC0288-04] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|15901065|ref|NP_345669.1| DNA repair protein RecN [Streptococcus pneumoniae TIGR4] gi|111657822|ref|ZP_01408539.1| hypothetical protein SpneT_02001004 [Streptococcus pneumoniae TIGR4] gi|14972682|gb|AAK75309.1| DNA repair protein RecN [Streptococcus pneumoniae TIGR4] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 LL+I I +F E + F +T++ G+ G GKS + +A+ + Sbjct: 2 LLEISIKNF-AIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLG 47 >gi|327313525|ref|YP_004328962.1| DNA repair protein RecN [Prevotella denticola F0289] gi|326944039|gb|AEA19924.1| DNA repair protein RecN [Prevotella denticola F0289] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I F +++ G+ G GKS + AI L R+ K Sbjct: 2 LKHLYIKNF-TLIDQLDIAFHSGFSVITGETGAGKSIILGAIGLLLGNRADSRQIKQGEK 60 Query: 89 KRSIK 93 K +I+ Sbjct: 61 KCTIE 65 >gi|325854340|ref|ZP_08171539.1| DNA repair protein RecN [Prevotella denticola CRIS 18C-A] gi|325484134|gb|EGC87068.1| DNA repair protein RecN [Prevotella denticola CRIS 18C-A] Length = 555 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I F +++ G+ G GKS + AI L R+ K Sbjct: 2 LKHLYIKNF-TLIDQLDIAFHSGFSVITGETGAGKSIILGAIGLLLGNRADSRQIKQGEK 60 Query: 89 KRSIK 93 K +I+ Sbjct: 61 KCTIE 65 >gi|315575516|gb|EFU87707.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315580043|gb|EFU92234.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 704 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 4 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 56 >gi|313109854|ref|ZP_07795788.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882290|gb|EFQ40884.1| putative ATP-binding component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 285 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 26 IFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I L DI +S F+ ++ L + G NG GK++L + I + Sbjct: 44 ILSLEDINVSFDGFKALRDLTLYIGIGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYF 103 Query: 84 GDSI 87 GD++ Sbjct: 104 GDTL 107 >gi|304381078|ref|ZP_07363732.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340387|gb|EFM06327.1| exonuclease SbcC [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 200 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAIEWLFYGY-TQRR 81 K L +++++F F ++I+F+ + L +++G+ G GK+ + +A+ + +G + + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQ 59 Query: 82 KHGDSIKKRSIKTPMPMCM 100 + + ++ PM + Sbjct: 60 REENDLRSHFADGKQPMSV 78 >gi|289625663|ref|ZP_06458617.1| overcoming lysogenization defect protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869396|gb|EGH04105.1| overcoming lysogenization defect protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 594 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY---GYTQRRKH 83 L I + +FR + + A + + G+N GK++L A+ T R Sbjct: 1 MHLSRIVVQNFRSLKYLD-VPIASGSSAIIGENSVGKTNLFHALRICLDVQLSSTYRSLL 59 Query: 84 GDSI 87 D I Sbjct: 60 KDDI 63 >gi|260583702|ref|ZP_05851450.1| DNA repair protein RecN [Granulicatella elegans ATCC 700633] gi|260158328|gb|EEW93396.1| DNA repair protein RecN [Granulicatella elegans ATCC 700633] Length = 561 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + ++ I +F E + +F +T++ G+ G GKS + +A+ L Sbjct: 2 IQELFIKNF-AIIEEVRCQFEKGMTVLTGETGAGKSIIIDAVGLLAGE 48 >gi|255316758|ref|ZP_05358341.1| putative phosphoesterase [Clostridium difficile QCD-76w55] Length = 864 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 21 YARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 ++ K + + ++EI +F F EF++ L +V+G +G GKS++ AI Sbjct: 352 FSSKGKYTITELEIINFACFKHAV-FEFSEGLNVVSGVSGQGKSAVLRAIR 401 >gi|192361120|ref|YP_001980527.1| recombination protein F [Cellvibrio japonicus Ueda107] gi|226737773|sp|B3PEM4|RECF_CELJU RecName: Full=DNA replication and repair protein recF gi|190687285|gb|ACE84963.1| RecF protein [Cellvibrio japonicus Ueda107] Length = 365 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L + + H R E IE + + ++ G NG GK+SL EAI L G + R Sbjct: 1 MSLARLRVHHLRNL-ESVDIEPSSRVNLIYGLNGSGKTSLLEAINVLALGRSFRS 54 >gi|182891126|gb|AAI65244.1| Zgc:152845 protein [Danio rerio] Length = 697 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I + +F + + L ++ G NG GKSS+ AI G T GD + Sbjct: 42 IVRIAMHNFLTYDHSEVFP-GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKV 99 >gi|115527798|gb|AAI24594.1| Zgc:152845 [Danio rerio] Length = 697 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I + +F + + L ++ G NG GKSS+ AI G T GD + Sbjct: 42 IVRIAMHNFLTYDHSEVFP-GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKV 99 >gi|157118733|ref|XP_001653234.1| ATP-binding cassette sub-family A member 3, putative [Aedes aegypti] gi|108875613|gb|EAT39838.1| ATP-binding cassette sub-family A member 3, putative [Aedes aegypti] Length = 1660 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 32 IEISHFRGFTEIQKIE--------FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 I+I R + +K+ F D +T++ G NG GK++ + +F + Sbjct: 515 IKIKGLRKAFDKEKVAVKGLHLNMFDDQITVLLGHNGAGKTTTMSMLTGVFSPTSGTALI 574 Query: 84 GDSIKKRSIKTPMP 97 D + +I Sbjct: 575 NDCDIRTNIDGARQ 588 >gi|29375997|ref|NP_815151.1| hypothetical protein EF1430 [Enterococcus faecalis V583] gi|29343459|gb|AAO81221.1| conserved hypothetical protein [Enterococcus faecalis V583] Length = 707 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 4 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 56 >gi|53712446|ref|YP_098438.1| hypothetical protein BF1154 [Bacteroides fragilis YCH46] gi|52215311|dbj|BAD47904.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 666 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I+IS+F+ + + + ++ G NG GK++L EAI YG K Sbjct: 1 MLIQRIKISNFKTYLSLDLDLTVDDDRPIILIGGSNGGGKTTLFEAISGALYGLKIDNK 59 >gi|71898353|ref|ZP_00680526.1| DNA repair protein RecN [Xylella fastidiosa Ann-1] gi|71731876|gb|EAO33934.1| DNA repair protein RecN [Xylella fastidiosa Ann-1] Length = 557 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L + I F ++EF +T+V+G+ G GKS + +A+ +L Sbjct: 2 LRHLTIKDF-AVVRNIELEFGPGMTVVSGETGAGKSLIIDALSFLSG 47 >gi|319937354|ref|ZP_08011761.1| hypothetical protein HMPREF9488_02596 [Coprobacillus sp. 29_1] gi|319807720|gb|EFW04313.1| hypothetical protein HMPREF9488_02596 [Coprobacillus sp. 29_1] Length = 549 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + IS F + +I+F ++++ G+ G GKS + +A+ Sbjct: 2 LKSLYISSF-VIIDQTRIDFESGMSVLTGETGAGKSIIIDAL 42 >gi|315029948|gb|EFT41880.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 704 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 4 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 56 >gi|307628250|gb|ADN72554.1| hypothetical protein UM146_15975 [Escherichia coli UM146] Length = 754 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 K+ IEI +FR +I+ A+ T+ G N GK++ EA+ ++ + Sbjct: 1 MKINFIEIKNFRKLKS-VRIDIAEKTTLFVGANNSGKTAAMEALGHFLVDASRFSVND 57 >gi|307175909|gb|EFN65722.1| Structural maintenance of chromosomes protein 6 [Camponotus floridanus] Length = 1198 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I + +F E +I +++ + G+NG GKS++ A+ G S+ Sbjct: 40 KVKSIRVRNFMCH-EALEIVLNENVNFIVGRNGSGKSAILTALTVGLGARANVTSRGTSV 98 Query: 88 KK 89 K+ Sbjct: 99 KE 100 >gi|260428922|ref|ZP_05782899.1| DNA replication and repair protein RecF [Citreicella sp. SE45] gi|260419545|gb|EEX12798.1| DNA replication and repair protein RecF [Citreicella sp. SE45] Length = 368 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 37 FRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 FR +I + G NG GK++L EA+ L G RR I +R Sbjct: 13 FRSHR-RAEIAVDARPVAIYGPNGAGKTNLIEAVSLLSPGRGMRRAAAQEIARR 65 >gi|237810722|ref|YP_002895173.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei MSHR346] gi|237504771|gb|ACQ97089.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei MSHR346] Length = 347 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 66 TDIAFRTGALTAIVGPNGSGKSTLLEALF 94 >gi|296139772|ref|YP_003647015.1| hypothetical protein Tpau_2064 [Tsukamurella paurometabola DSM 20162] gi|296027906|gb|ADG78676.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length = 1120 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEA 69 ++L +++ ++ F + + I+ G +G GKSSL +A Sbjct: 9 YRLTRLQVVNWGTFDGYKDFPIDERGVILTGPSGSGKSSLMDA 51 >gi|254181914|ref|ZP_04888511.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1655] gi|184212452|gb|EDU09495.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1655] Length = 344 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 63 TDIAFRTGALTAIVGPNGSGKSTLLEALF 91 >gi|167909398|ref|ZP_02496489.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 112] Length = 311 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 30 TDIAFRTGALTAIVGPNGSGKSTLLEALF 58 >gi|167844181|ref|ZP_02469689.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei B7210] Length = 308 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 27 TDIAFRTGALTAIVGPNGSGKSTLLEALF 55 >gi|167822600|ref|ZP_02454071.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 9] Length = 306 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 25 TDIAFRTGALTAIVGPNGSGKSTLLEALF 53 >gi|167736975|ref|ZP_02409749.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 14] Length = 305 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 24 TDIAFRTGALTAIVGPNGSGKSTLLEALF 52 >gi|167717953|ref|ZP_02401189.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei DM98] Length = 299 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 18 TDIAFRTGALTAIVGPNGSGKSTLLEALF 46 >gi|134279443|ref|ZP_01766155.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 305] gi|167814079|ref|ZP_02445759.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 91] gi|226199504|ref|ZP_03795061.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei Pakistan 9] gi|254187846|ref|ZP_04894358.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254262021|ref|ZP_04953075.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1710a] gi|254296036|ref|ZP_04963493.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 406e] gi|134248643|gb|EBA48725.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 305] gi|157806085|gb|EDO83255.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 406e] gi|157935526|gb|EDO91196.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|225928385|gb|EEH24415.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei Pakistan 9] gi|254220710|gb|EET10094.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1710a] Length = 347 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 66 TDIAFRTGALTAIVGPNGSGKSTLLEALF 94 >gi|126454353|ref|YP_001064818.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1106a] gi|217419381|ref|ZP_03450887.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 576] gi|242316196|ref|ZP_04815212.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1106b] gi|254196445|ref|ZP_04902869.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei S13] gi|126227995|gb|ABN91535.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1106a] gi|169653188|gb|EDS85881.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei S13] gi|217396685|gb|EEC36701.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 576] gi|242139435|gb|EES25837.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1106b] Length = 347 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 66 TDIAFRTGALTAIVGPNGSGKSTLLEALF 94 >gi|126441247|ref|YP_001057570.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 668] gi|126220740|gb|ABN84246.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 668] Length = 347 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 66 TDIAFRTGALTAIVGPNGSGKSTLLEALF 94 >gi|121600035|ref|YP_991473.1| ABC transporter, ATP-binding protein [Burkholderia mallei SAVP1] gi|124384462|ref|YP_001027449.1| ABC transporter, ATP-binding protein [Burkholderia mallei NCTC 10229] gi|126450500|ref|YP_001082415.1| ABC transporter, ATP-binding protein [Burkholderia mallei NCTC 10247] gi|238561343|ref|ZP_00442215.2| ABC transporter, ATP-binding protein [Burkholderia mallei GB8 horse 4] gi|251767378|ref|ZP_02267013.2| ABC transporter, ATP-binding protein [Burkholderia mallei PRL-20] gi|254174649|ref|ZP_04881310.1| ABC transporter, ATP-binding protein [Burkholderia mallei ATCC 10399] gi|254201725|ref|ZP_04908089.1| ABC transporter, ATP-binding protein [Burkholderia mallei FMH] gi|254207058|ref|ZP_04913409.1| ABC transporter, ATP-binding protein [Burkholderia mallei JHU] gi|254357539|ref|ZP_04973813.1| ABC transporter, ATP-binding protein [Burkholderia mallei 2002721280] gi|121228845|gb|ABM51363.1| ABC transporter, ATP-binding protein [Burkholderia mallei SAVP1] gi|124292482|gb|ABN01751.1| ABC transporter, ATP-binding protein [Burkholderia mallei NCTC 10229] gi|126243370|gb|ABO06463.1| ABC transporter, ATP-binding protein [Burkholderia mallei NCTC 10247] gi|147747619|gb|EDK54695.1| ABC transporter, ATP-binding protein [Burkholderia mallei FMH] gi|147752600|gb|EDK59666.1| ABC transporter, ATP-binding protein [Burkholderia mallei JHU] gi|148026603|gb|EDK84688.1| ABC transporter, ATP-binding protein [Burkholderia mallei 2002721280] gi|160695694|gb|EDP85664.1| ABC transporter, ATP-binding protein [Burkholderia mallei ATCC 10399] gi|238524825|gb|EEP88256.1| ABC transporter, ATP-binding protein [Burkholderia mallei GB8 horse 4] gi|243062935|gb|EES45121.1| ABC transporter, ATP-binding protein [Burkholderia mallei PRL-20] Length = 356 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 75 TDIAFRTGALTAIVGPNGSGKSTLLEALF 103 >gi|70725144|ref|YP_252058.1| hypothetical protein SH0143 [Staphylococcus haemolyticus JCSC1435] gi|68445868|dbj|BAE03452.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 247 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 FKLLDIEISHFRGFTEIQ-KIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 + +++ ++H +I KI + + + G NG GKSSL +++ F + +G Sbjct: 4 IRNMNLHLNHKHVLKDITLKIPISGEIIGIMGPNGAGKSSLLKSLIGSFNASGEMNLYGK 63 Query: 86 SIKKR 90 SI K+ Sbjct: 64 SIHKQ 68 >gi|53718118|ref|YP_107104.1| ABC transport system ATP-binding protein [Burkholderia pseudomallei K96243] gi|53724483|ref|YP_104635.1| ABC transporter ATP-binding protein [Burkholderia mallei ATCC 23344] gi|76812048|ref|YP_332115.1| ABC transporter ATP-binding protein [Burkholderia pseudomallei 1710b] gi|52208532|emb|CAH34468.1| ABC transport system ATP-binding protein [Burkholderia pseudomallei K96243] gi|52427906|gb|AAU48499.1| ABC transporter, ATP-binding protein [Burkholderia mallei ATCC 23344] gi|76581501|gb|ABA50976.1| ABC transporter, ATP-binding protein [Burkholderia pseudomallei 1710b] Length = 318 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 37 TDIAFRTGALTAIVGPNGSGKSTLLEALF 65 >gi|327312442|ref|YP_004327879.1| DNA replication and repair protein RecF [Prevotella denticola F0289] gi|326946310|gb|AEA22195.1| DNA replication and repair protein RecF [Prevotella denticola F0289] Length = 368 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + + L G NG GK++L +A+ +L + + Sbjct: 1 MQLDRLSIINYKNI-QTATLNLSAKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VMRHDAD 66 >gi|325124963|gb|ADY84293.1| Putative ATP Protein in ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 451 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F + + I R E +++ +T++ G NG GKSSL +A+ L G Sbjct: 239 FVMKNFAIKQGRPLLEQKELSIPKGKVTLITGPNGSGKSSLFKAMTKLLDYQGSLTWEGK 298 Query: 86 SIKKRSIKT 94 + K +T Sbjct: 299 EVAKLKERT 307 >gi|330934971|ref|XP_003304776.1| hypothetical protein PTT_17452 [Pyrenophora teres f. teres 0-1] gi|311318432|gb|EFQ87095.1| hypothetical protein PTT_17452 [Pyrenophora teres f. teres 0-1] Length = 1448 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 47 EFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCK 106 F + V G NG GKS++ +++ ++F +++ + + A P Sbjct: 262 PFHASFSSVVGPNGSGKSNVIDSLLFVFG------FRASKMRQSKLSALIHNSAAFPDLD 315 Query: 107 Y 107 Y Sbjct: 316 Y 316 >gi|298713733|emb|CBJ48924.1| smc-like protein [Ectocarpus siliculosus] Length = 1167 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L + +S+F + H+ +NG+NG GKS++ A++ + Sbjct: 86 VLKVHVSNFMCHR-KLSVPLCKHVNFINGRNGSGKSAILAALQICLGAKAHLTHRAKKMA 144 Query: 89 K 89 Sbjct: 145 D 145 >gi|197284580|ref|YP_002150452.1| hypothetical protein PMI0685 [Proteus mirabilis HI4320] gi|227356762|ref|ZP_03841147.1| OLD family ATP-dependent endonuclease [Proteus mirabilis ATCC 29906] gi|194682067|emb|CAR41598.1| conserved hypothetical protein [Proteus mirabilis HI4320] gi|227163052|gb|EEI47987.1| OLD family ATP-dependent endonuclease [Proteus mirabilis ATCC 29906] Length = 557 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFY 75 L +EI+ FRG ++ + T++ G+N +GK+SL +A+ Sbjct: 1 MYLERVEIAGFRGLN---RLSLPLDMNTVLVGENAWGKTSLLDALTLSLG 47 >gi|116513338|ref|YP_812244.1| ABC-type cobalt transport system, ATPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092653|gb|ABJ57806.1| ABC-type cobalt transport system, ATPase component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 451 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 F + + I R E +++ +T++ G NG GKSSL +A+ L G Sbjct: 239 FVMKNFAIKQGRPLLEQKELSIPKGKVTLITGPNGSGKSSLFKAMTKLLDYQGSLTWEGK 298 Query: 86 SIKKRSIKT 94 + K +T Sbjct: 299 EVAKLKERT 307 >gi|326329760|ref|ZP_08196081.1| ABC transporter, ATP-binding protein [Nocardioidaceae bacterium Broad-1] gi|325952525|gb|EGD44544.1| ABC transporter, ATP-binding protein [Nocardioidaceae bacterium Broad-1] Length = 243 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 +E A +T + G+NG GKS++ EA+ + + + R+ ++P+ Sbjct: 40 LELAAGVTFLVGENGSGKSTIVEAVAAAYGLNPEGGSRNTNHSTRASESPL 90 >gi|293382355|ref|ZP_06628294.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293389383|ref|ZP_06633841.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312907403|ref|ZP_07766394.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910021|ref|ZP_07768868.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|291080300|gb|EFE17664.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081270|gb|EFE18233.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310626431|gb|EFQ09714.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311289294|gb|EFQ67850.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 712 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 12 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 64 >gi|284054275|ref|ZP_06384485.1| ATPase [Arthrospira platensis str. Paraca] gi|291568930|dbj|BAI91202.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 395 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHG 84 + IE R + +Q +E LT+ G NG GKS++ + +L + + + Sbjct: 4 IPKIEYLKVRNYRALQNLELKKITPLTVFLGPNGSGKSTIFDVFAFLSECFTESLSKAWD 63 Query: 85 DSIKKRSIKTPMPMCMAVPRCKYQ 108 + R ++T V KY+ Sbjct: 64 RRGRFRELRTRDSQGCIVIELKYR 87 >gi|269798340|ref|YP_003312240.1| ATP-dependent endonuclease of the OLD family- like protein [Veillonella parvula DSM 2008] gi|269094969|gb|ACZ24960.1| ATP-dependent endonuclease of the OLD family- like protein [Veillonella parvula DSM 2008] Length = 555 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 + + I ++R ++ + F + + G+N GKS+ + +E + Sbjct: 1 MYIKWMHIENYRNLADVT-LSFHNDINYFVGENSVGKSNFLDLLEIIM 47 >gi|225575659|ref|ZP_03784269.1| hypothetical protein RUMHYD_03752 [Blautia hydrogenotrophica DSM 10507] gi|225037116|gb|EEG47362.1| hypothetical protein RUMHYD_03752 [Blautia hydrogenotrophica DSM 10507] Length = 514 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 ++ ++ +F + + F + ++ G+N GKS+L +FYG + R Sbjct: 1 MRIERAKVDNFGKLNQRE-FRFGPGINVIYGENEGGKSTLHAFFRGMFYGLPRMRGR 56 >gi|115641119|ref|XP_001203247.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115657660|ref|XP_001202762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 43 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Query: 29 LLDIEISHFRGFT----EIQKIEFADHLTIVNGQNGYGKS 64 + + I R F + Q I+F LT++ GQNG GK+ Sbjct: 4 VEKLSIQGIRSFGQDDGDRQVIQFFHPLTLIVGQNGAGKT 43 >gi|319775013|ref|YP_004137501.1| DNA repair protein RecN [Haemophilus influenzae F3047] gi|317449604|emb|CBY85809.1| DNA repair protein RecN [Haemophilus influenzae F3047] Length = 558 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F IEFA ++++ G+ G GKS +A+ F + Sbjct: 2 LTQLTINNF-AIVRQLDIEFAKGMSVITGETGAGKSIAIDALGLCFGQRVETSM 54 >gi|319896483|ref|YP_004134676.1| DNA repair protein recn [Haemophilus influenzae F3031] gi|317431985|emb|CBY80333.1| DNA repair protein RecN [Haemophilus influenzae F3031] Length = 558 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I++F IEFA ++++ G+ G GKS +A+ F + Sbjct: 2 LTQLTINNF-AIVRQLDIEFAKGMSVITGETGAGKSIAIDALGLCFGQRVETSM 54 >gi|194289236|ref|YP_002005143.1| recombination and repair protein [Cupriavidus taiwanensis LMG 19424] gi|193223071|emb|CAQ69076.1| recombination and repair protein [Cupriavidus taiwanensis LMG 19424] Length = 583 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I F + ++FA T+ G+ G GKS L +A+ + + Sbjct: 2 LRSLSIRDF-VIVDTLDLDFASGFTVFTGETGAGKSILIDALALVLGERADAGVVREGAP 60 Query: 89 KRSI 92 + S+ Sbjct: 61 RASV 64 >gi|166365757|ref|YP_001658030.1| hypothetical protein MAE_30160 [Microcystis aeruginosa NIES-843] gi|166088130|dbj|BAG02838.1| hypothetical protein MAE_30160 [Microcystis aeruginosa NIES-843] Length = 475 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I+I F+ F + + F LT+V G N GKS+L +A++ Sbjct: 2 ITYIKIHGFKSFHNFEMV-FTP-LTVVAGVNASGKSNLFDALQ 42 >gi|159030117|emb|CAO91009.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 474 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I+I F+ F + + F LT+V G N GKS+L +A++ Sbjct: 2 ITYIKIHGFKSFHNFEMV-FTP-LTVVAGVNASGKSNLFDALQ 42 >gi|149374939|ref|ZP_01892712.1| putative GTP-binding protein [Marinobacter algicola DG893] gi|149360828|gb|EDM49279.1| putative GTP-binding protein [Marinobacter algicola DG893] Length = 879 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + I R F + ++ L +++G N GKS+L +I F+ + D Sbjct: 1 MKLQRMRIEQLRQFRKPFVLDNLQPGLNLIHGPNESGKSTLVRSIRAAFFERYRSTAVDD 60 >gi|78222439|ref|YP_384186.1| nuclease SbcCD subunit C [Geobacter metallireducens GS-15] gi|78193694|gb|ABB31461.1| nuclease SbcCD, C subunit, putative [Geobacter metallireducens GS-15] Length = 723 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + + +++ F F + F + +V G+N GKS+L AI +G+ + + Sbjct: 1 MLWITSVQLPAFGRFGGEE-FTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDR 57 >gi|27366687|ref|NP_762214.1| putative ATP-dependent endonuclease of the OLD family [Vibrio vulnificus CMCP6] gi|320158579|ref|YP_004190957.1| putative ATP-dependent endonuclease of the OLD family [Vibrio vulnificus MO6-24/O] gi|27358253|gb|AAO07204.1|AE016808_224 Predicted ATP-dependent endonuclease of the OLD family [Vibrio vulnificus CMCP6] gi|319933891|gb|ADV88754.1| predicted ATP-dependent endonuclease of the OLD family [Vibrio vulnificus MO6-24/O] Length = 543 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEIS FRG + F D LT + G+N +GKSSL +A+ Sbjct: 1 MLLERIEISGFRGIR-RLSLSF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|37676401|ref|NP_936797.1| ATP-dependent endonuclease [Vibrio vulnificus YJ016] gi|37200943|dbj|BAC96767.1| predicted ATP-dependent endonuclease [Vibrio vulnificus YJ016] Length = 543 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IEIS FRG + F D LT + G+N +GKSSL +A+ Sbjct: 1 MLLERIEISGFRGIR-RLSLSF-DELTTLIGENTWGKSSLLDALSVAL 46 >gi|320163616|gb|EFW40515.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 952 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 13 LSKSLTSYYARKLIFK----LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 LS+++ ++ L + L + + +F+ F +I I+ G NG GK+ + Sbjct: 230 LSQAVVTFVQHLLTHRIERNLHRLRLQNFKKFEDIT-FTLTPSPKIIVGANGSGKTQVLW 288 Query: 69 AIEWLFYGYTQR 80 A G+ R Sbjct: 289 ATLIFLRGHNAR 300 >gi|152991421|ref|YP_001357143.1| hypothetical protein NIS_1680 [Nitratiruptor sp. SB155-2] gi|151423282|dbj|BAF70786.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 662 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD---HLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K I I + + F++ + ++ G+NG+GK+S +++ +G T Sbjct: 1 MKFKRITIENMFSYRGNISFYFSNSEKPIILIIGENGFGKTSFINSVKIGLHGLT 55 >gi|119470692|ref|ZP_01613360.1| exonuclease sbcCD subunit C [Alteromonadales bacterium TW-7] gi|119446162|gb|EAW27440.1| exonuclease sbcCD subunit C [Alteromonadales bacterium TW-7] Length = 1216 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD------HLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 K+ + I + + + I+F L + G G GKS+ +AI Y T Sbjct: 1 MKITAVRIHNLASIVDAE-IDFTQAPLKDAGLFAITGDTGAGKSTFLDAICLALYTKTA- 58 Query: 81 RKHGDS 86 R GD Sbjct: 59 RLKGDK 64 >gi|58532930|ref|YP_195153.1| recombination endonuclease subunit [Synechococcus phage S-PM2] gi|58331397|emb|CAF34183.1| recombination endonuclease subunit [Synechococcus phage S-PM2] Length = 576 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLT-IVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F + +I+ T ++ G NG GKS++ +A+ + +G R+ + Sbjct: 1 MITFKKIRWKNFLSTGNVFTEIDITKTKTNLIVGDNGAGKSTILDALTFSLFGKPFRKIN 60 Query: 84 G 84 Sbjct: 61 K 61 >gi|114319169|ref|YP_740852.1| DNA replication and repair protein RecF [Alkalilimnicola ehrlichii MLHE-1] gi|114225563|gb|ABI55362.1| DNA replication and repair protein RecF [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%) Query: 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 + +V G N GK+SL EAI ++ + R + + Sbjct: 19 GAGINVVVGANAAGKTSLLEAIYFVARTRSFRATRTAQMIGNGHE 63 >gi|315637139|ref|ZP_07892362.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Arcobacter butzleri JV22] gi|315478675|gb|EFU69385.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Arcobacter butzleri JV22] Length = 1028 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 26 IFKLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 I K+ + I+ +G + +K + L + G G GKS++ + I YG T R Sbjct: 3 ILKIKSLNINSLKGEFEVDFEKFLKDESLFAITGPTGAGKSTILDVITCALYGRTAR 59 >gi|301055518|ref|YP_003793729.1| SMC domain-containing protein [Bacillus anthracis CI] gi|300377687|gb|ADK06591.1| SMC domain protein [Bacillus cereus biovar anthracis str. CI] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|299141070|ref|ZP_07034208.1| RecF protein [Prevotella oris C735] gi|298578036|gb|EFI49904.1| RecF protein [Prevotella oris C735] Length = 366 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +++ E I + L G NG GK+++ +A+ +L + + + Sbjct: 3 LNRLSILNYKNIREAT-ISLSPKLNCFIGSNGVGKTNVLDAVHYLSFCRSAFNPIDSQVI 61 Query: 89 KRSIK 93 + Sbjct: 62 MHNQD 66 >gi|281424150|ref|ZP_06255063.1| RecF protein [Prevotella oris F0302] gi|281401711|gb|EFB32542.1| RecF protein [Prevotella oris F0302] Length = 366 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +++ E I + L G NG GK+++ +A+ +L + + + Sbjct: 3 LNRLSILNYKNIREAT-ISLSPKLNCFIGSNGVGKTNVLDAVHYLSFCRSAFNPIDSQVI 61 Query: 89 KRSIK 93 + Sbjct: 62 MHNQD 66 >gi|228909854|ref|ZP_04073675.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis IBL 200] gi|228849689|gb|EEM94522.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis IBL 200] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|228922775|ref|ZP_04086073.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836830|gb|EEM82173.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|228929071|ref|ZP_04092099.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830583|gb|EEM76192.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|228947743|ref|ZP_04110030.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811730|gb|EEM58064.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|228960289|ref|ZP_04121942.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799313|gb|EEM46277.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|229093076|ref|ZP_04224202.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-42] gi|228690299|gb|EEL44090.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-42] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|229180300|ref|ZP_04307643.1| ABC transporter, ATP-binding protein [Bacillus cereus 172560W] gi|228603047|gb|EEK60525.1| ABC transporter, ATP-binding protein [Bacillus cereus 172560W] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|182414110|ref|YP_001819176.1| hypothetical protein Oter_2294 [Opitutus terrae PB90-1] gi|177841324|gb|ACB75576.1| hypothetical protein Oter_2294 [Opitutus terrae PB90-1] Length = 549 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 28 KLLDIEISHFRGF-TEIQKIEFADHLTIVNGQNGYGKSSLS 67 L+ + + R F + +F +T + G NG GKS++ Sbjct: 30 YLVAVTLEKIRQFQGGKVRFDF--PVTALIGPNGSGKSTIL 68 >gi|196045900|ref|ZP_03113129.1| conserved hypothetical protein [Bacillus cereus 03BB108] gi|196023340|gb|EDX62018.1| conserved hypothetical protein [Bacillus cereus 03BB108] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|196038794|ref|ZP_03106102.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] gi|196030517|gb|EDX69116.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|206970962|ref|ZP_03231913.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|218899182|ref|YP_002447593.1| hypothetical protein BCG9842_B1110 [Bacillus cereus G9842] gi|228902532|ref|ZP_04066684.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis IBL 4222] gi|228942947|ref|ZP_04105456.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967052|ref|ZP_04128088.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228976549|ref|ZP_04137003.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228983154|ref|ZP_04143402.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis Bt407] gi|229192235|ref|ZP_04319200.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10876] gi|206733734|gb|EDZ50905.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|218545246|gb|ACK97640.1| conserved hypothetical protein [Bacillus cereus G9842] gi|228591185|gb|EEK49039.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10876] gi|228776571|gb|EEM24890.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis Bt407] gi|228783171|gb|EEM31296.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792421|gb|EEM39987.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228816721|gb|EEM62837.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228857122|gb|EEN01630.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis IBL 4222] gi|326941795|gb|AEA17691.1| ABC transporter ATP-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|218232632|ref|YP_002368825.1| hypothetical protein BCB4264_A4128 [Bacillus cereus B4264] gi|229111497|ref|ZP_04241048.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-15] gi|229152223|ref|ZP_04280416.1| ABC transporter, ATP-binding protein [Bacillus cereus m1550] gi|218160589|gb|ACK60581.1| conserved hypothetical protein [Bacillus cereus B4264] gi|228631185|gb|EEK87821.1| ABC transporter, ATP-binding protein [Bacillus cereus m1550] gi|228671879|gb|EEL27172.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-15] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|196035046|ref|ZP_03102453.1| conserved hypothetical protein [Bacillus cereus W] gi|218905158|ref|YP_002452992.1| hypothetical protein BCAH820_4042 [Bacillus cereus AH820] gi|225866009|ref|YP_002751387.1| hypothetical protein BCA_4133 [Bacillus cereus 03BB102] gi|228916663|ref|ZP_04080228.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935342|ref|ZP_04098163.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229123545|ref|ZP_04252740.1| ABC transporter, ATP-binding protein [Bacillus cereus 95/8201] gi|195992585|gb|EDX56546.1| conserved hypothetical protein [Bacillus cereus W] gi|218535795|gb|ACK88193.1| conserved hypothetical protein [Bacillus cereus AH820] gi|225788523|gb|ACO28740.1| conserved hypothetical protein [Bacillus cereus 03BB102] gi|228659680|gb|EEL15325.1| ABC transporter, ATP-binding protein [Bacillus cereus 95/8201] gi|228824318|gb|EEM70129.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842850|gb|EEM87933.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|156938172|ref|YP_001435968.1| SMC domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156567156|gb|ABU82561.1| SMC domain protein [Ignicoccus hospitalis KIN4/I] Length = 878 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +LL +E+ +F + E ++ + + +V G NG GKSS +AI + RK Sbjct: 4 QLLKLELRNFLSY-ENLEVRIPEGVVVVVGPNGAGKSSFVDAIAYALTSAAVSRK 57 >gi|119871577|ref|YP_929584.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] gi|119672985|gb|ABL87241.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] Length = 217 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Query: 32 IEISHFRGFTEIQKIEFA----DHLTIVNGQNGYGKSSLSEAI 70 IE+ R ++E + +T+V G+NG GK++L +AI Sbjct: 3 IEVRGLRARRGRFQLEVERLSVNSVTVVLGRNGSGKTTLLDAI 45 >gi|157803214|ref|YP_001491763.1| recombination protein F [Rickettsia canadensis str. McKiel] gi|226737825|sp|A8EX95|RECF_RICCK RecName: Full=DNA replication and repair protein recF gi|157784477|gb|ABV72978.1| recombination protein F [Rickettsia canadensis str. McKiel] Length = 360 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R F ++ ++ + I+ G+NG GK+++ EAI + G R Sbjct: 4 IFLHSLILENYRNFKNLE-LKIDNTPIILIGENGSGKTNILEAISLFYPGRGLRSAKLAD 62 Query: 87 IKKRSIK 93 I K S Sbjct: 63 ICKTSED 69 >gi|49480609|ref|YP_038083.1| ABC transporter ATP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332165|gb|AAT62811.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 250 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|52141469|ref|YP_085360.1| ABC transporter, ATP-binding protein [Bacillus cereus E33L] gi|51974938|gb|AAU16488.1| ABC transporter, ATP-binding protein [Bacillus cereus E33L] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|30264097|ref|NP_846474.1| hypothetical protein BA_4239 [Bacillus anthracis str. Ames] gi|47529532|ref|YP_020881.1| hypothetical protein GBAA_4239 [Bacillus anthracis str. 'Ames Ancestor'] gi|49186929|ref|YP_030181.1| hypothetical protein BAS3931 [Bacillus anthracis str. Sterne] gi|65321413|ref|ZP_00394372.1| COG3910: Predicted ATPase [Bacillus anthracis str. A2012] gi|165871212|ref|ZP_02215862.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167633691|ref|ZP_02392015.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|167639473|ref|ZP_02397744.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|170687236|ref|ZP_02878454.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|170705925|ref|ZP_02896388.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|177652676|ref|ZP_02935092.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190566171|ref|ZP_03019090.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227816799|ref|YP_002816808.1| hypothetical protein BAMEG_4279 [Bacillus anthracis str. CDC 684] gi|229601657|ref|YP_002868323.1| hypothetical protein BAA_4261 [Bacillus anthracis str. A0248] gi|254683789|ref|ZP_05147649.1| hypothetical protein BantC_08060 [Bacillus anthracis str. CNEVA-9066] gi|254721625|ref|ZP_05183414.1| hypothetical protein BantA1_04050 [Bacillus anthracis str. A1055] gi|254736135|ref|ZP_05193841.1| hypothetical protein BantWNA_13331 [Bacillus anthracis str. Western North America USA6153] gi|254744025|ref|ZP_05201708.1| hypothetical protein BantKB_24000 [Bacillus anthracis str. Kruger B] gi|254754196|ref|ZP_05206231.1| hypothetical protein BantV_17075 [Bacillus anthracis str. Vollum] gi|254758114|ref|ZP_05210141.1| hypothetical protein BantA9_07390 [Bacillus anthracis str. Australia 94] gi|30258742|gb|AAP27960.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gi|47504680|gb|AAT33356.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180856|gb|AAT56232.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|164713131|gb|EDR18658.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167512532|gb|EDR87907.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|167531097|gb|EDR93784.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|170129465|gb|EDS98329.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|170668853|gb|EDT19598.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|172082011|gb|EDT67079.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190563090|gb|EDV17056.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227003206|gb|ACP12949.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684] gi|229266065|gb|ACQ47702.1| conserved hypothetical protein [Bacillus anthracis str. A0248] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 69 >gi|315303035|ref|ZP_07873745.1| DNA repair protein RecN [Listeria ivanovii FSL F6-596] gi|313628602|gb|EFR97025.1| DNA repair protein RecN [Listeria ivanovii FSL F6-596] Length = 563 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLSFREGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|304384657|ref|ZP_07367003.1| DNA repair ATPase [Pediococcus acidilactici DSM 20284] gi|304328851|gb|EFL96071.1| DNA repair ATPase [Pediococcus acidilactici DSM 20284] Length = 855 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ IEI F G + + + L + G N GKS+L + I +F+G+ Q R Sbjct: 1 MKIKRIEIYGF-GKWQNVTFDLQNDLQVFYGLNEAGKSTLRQFIYSVFFGFAQGRGSNKY 59 Query: 87 IK 88 +K Sbjct: 60 LK 61 >gi|300934347|ref|ZP_07149603.1| recombination protein F [Corynebacterium resistens DSM 45100] Length = 452 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 25/42 (59%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIK 93 ++I +G NG+GK+++ EA+ +L + + R ++ + K Sbjct: 1 MSIFSGPNGHGKTNIVEALGYLAHLGSHRVTSDSALVREGQK 42 >gi|270290461|ref|ZP_06196686.1| DNA repair ATPase [Pediococcus acidilactici 7_4] gi|270281242|gb|EFA27075.1| DNA repair ATPase [Pediococcus acidilactici 7_4] Length = 855 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ IEI F G + + + L + G N GKS+L + I +F+G+ Q R Sbjct: 1 MKIKRIEIYGF-GKWQNVTFDLQNDLQVFYGLNEAGKSTLRQFIYSVFFGFAQGRGSNKY 59 Query: 87 IK 88 +K Sbjct: 60 LK 61 >gi|222151642|ref|YP_002560798.1| hypothetical protein MCCL_1395 [Macrococcus caseolyticus JCSC5402] gi|222120767|dbj|BAH18102.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 506 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 13 LSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 L K T Y K+ + D I + KIEF DH+ + G NG GK+++ E Sbjct: 264 LKKGTTLYNLNKVQIRNKDNSILNLNNL----KIEFGDHI-GIIGDNGSGKTTILE 314 >gi|78189728|ref|YP_380066.1| hypothetical protein Cag_1772 [Chlorobium chlorochromatii CaD3] gi|78171927|gb|ABB29023.1| hypothetical protein Cag_1772 [Chlorobium chlorochromatii CaD3] Length = 573 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 29 LLDIEISHFRGFTEIQKIEFA-DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 L +I I +F+ ++++I F ++ G N GKS++ +A+ + + Sbjct: 2 LTNITIENFK---KLERISFPLSQSVVIIGPNNSGKSTIFQAL--CLWEIGVKN 50 >gi|328946677|gb|EGG40815.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis SK1087] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IF+ D++I + R T+ + F + + G NG GK++L +++ + + + + Sbjct: 322 RFIFQAKDLQIGYDRPLTQPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIIPPISGQVE 381 Query: 83 HGDSIKKRSIKTPMP 97 GD ++ + + Sbjct: 382 RGDYLELGYFEQEVE 396 >gi|327470571|gb|EGF16027.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis SK330] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IF+ D++I + R T+ + F + + G NG GK++L +++ + + + + Sbjct: 322 RFIFQAKDLQIGYDRPLTQPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIIPPISGQVE 381 Query: 83 HGDSIKKRSIKTPMP 97 GD ++ + + Sbjct: 382 RGDYLELGYFEQEVE 396 >gi|324991424|gb|EGC23357.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis SK353] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IF+ D++I + R T+ + F + + G NG GK++L +++ + + + + Sbjct: 322 RFIFQAKDLQIGYDRPLTQPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIIPPISGQVE 381 Query: 83 HGDSIKKRSIKTPMP 97 GD ++ + + Sbjct: 382 RGDYLELGYFEQEVE 396 >gi|323698858|ref|ZP_08110770.1| SMC domain protein [Desulfovibrio sp. ND132] gi|323458790|gb|EGB14655.1| SMC domain protein [Desulfovibrio desulfuricans ND132] Length = 569 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 32 IEISHFRGFT--EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 +E+ R E ++EF+ L + G+ G GKS + A+++L ++ Sbjct: 31 LELLRIRNLALIEDAELEFSPGLNALTGETGAGKSFIMRAVDFLMGERMDKKL 83 >gi|323351145|ref|ZP_08086801.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis VMC66] gi|322122369|gb|EFX94080.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis VMC66] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IF+ D++I + R T+ + F + + G NG GK++L +++ + + + + Sbjct: 322 RFIFQAKDLQIGYDRPLTQPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIIPPISGQVE 381 Query: 83 HGDSIKKRSIKTPMP 97 GD ++ + + Sbjct: 382 RGDYLELGYFEQEVE 396 >gi|313619061|gb|EFR90872.1| DNA repair protein RecN [Listeria innocua FSL S4-378] Length = 206 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|290961516|ref|YP_003492698.1| iron-siderophore uptake system ATP-binding protein [Streptomyces scabiei 87.22] gi|260651042|emb|CBG74161.1| putative iron-siderophore uptake system ATP-binding component [Streptomyces scabiei 87.22] Length = 323 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 R E +E DH T++ G N GKS+L A+ + + G + + M Sbjct: 62 RVIAEQLSVEIPDHSFTVIVGPNACGKSTLLRALSRML-----KPSRGRVLLDGQVIQSM 116 Query: 97 P 97 P Sbjct: 117 P 117 >gi|229526763|ref|ZP_04416167.1| hypothetical protein VCA_000893 [Vibrio cholerae bv. albensis VL426] gi|229336921|gb|EEO01939.1| hypothetical protein VCA_000893 [Vibrio cholerae bv. albensis VL426] Length = 663 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K+ ++ I ++R + + T++ G+N GK+S +EA + ++ D Sbjct: 1 MKIKNVRIKNYRLLKD-VSFSIDEKTTLIVGRNNTGKTSFAEAFRSFLNPAGPKVRYEDF 59 Query: 87 IKKR 90 + Sbjct: 60 NQSC 63 >gi|227553228|ref|ZP_03983277.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|227177594|gb|EEI58566.1| conserved hypothetical protein [Enterococcus faecalis HH22] Length = 712 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 12 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 64 >gi|217076884|ref|YP_002334600.1| hypothetical protein THA_797 [Thermosipho africanus TCF52B] gi|217036737|gb|ACJ75259.1| conserved hypothetical protein [Thermosipho africanus TCF52B] Length = 818 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + ++I+ F G + ++I+F L ++ G N GK++L+ Sbjct: 1 MLIKKVKINGF-GKLKNKEIKFKPGLNVIFGPNSSGKTTLA 40 >gi|170751877|ref|YP_001758137.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium radiotolerans JCM 2831] gi|170658399|gb|ACB27454.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium radiotolerans JCM 2831] Length = 261 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + L + F+ ++ D + ++ G NG GK+++ + I Sbjct: 22 LAVEALTVSFDGFKAVNDVSFYVDPDEIRVIIGPNGAGKTTVLDLI 67 >gi|218781958|ref|YP_002433276.1| AAA ATPase [Desulfatibacillum alkenivorans AK-01] gi|218763342|gb|ACL05808.1| AAA ATPase [Desulfatibacillum alkenivorans AK-01] Length = 233 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 21/31 (67%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 FT+ + +EF +T G+NG GKS+L +AI Sbjct: 26 FTKTESLEFTRPVTFFTGENGTGKSTLLKAI 56 >gi|188582808|ref|YP_001926253.1| urea ABC transporter ATP-binding protein [Methylobacterium populi BJ001] gi|179346306|gb|ACB81718.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium populi BJ001] Length = 262 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + L + F+ ++ D + ++ G NG GK+++ + I Sbjct: 23 LAVEALTVSFDGFKAVNDVSFYVDPDEIRVIIGPNGAGKTTVLDLI 68 >gi|163852792|ref|YP_001640835.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium extorquens PA1] gi|218531618|ref|YP_002422434.1| urea ABC transporter ATP-binding protein UrtD [Methylobacterium chloromethanicum CM4] gi|240140117|ref|YP_002964594.1| putative leucine/isoleucine/valine transporter subunit (ATP-binding component of ABC superfamily) (livG) [Methylobacterium extorquens AM1] gi|254562556|ref|YP_003069651.1| leucine/isoleucine/valine ABC transporter ATP-binding protein [Methylobacterium extorquens DM4] gi|163664397|gb|ABY31764.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium extorquens PA1] gi|218523921|gb|ACK84506.1| urea ABC transporter, ATP-binding protein UrtD [Methylobacterium chloromethanicum CM4] gi|240010091|gb|ACS41317.1| putative leucine/isoleucine/valine transporter subunit (ATP-binding component of ABC superfamily) (livG) [Methylobacterium extorquens AM1] gi|254269834|emb|CAX25812.1| putative leucine/isoleucine/valine transporter subunit (ATP-binding component of ABC superfamily) (livG) [Methylobacterium extorquens DM4] Length = 262 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + L + F+ ++ D + ++ G NG GK+++ + I Sbjct: 23 LAVEALTVSFDGFKAVNDVSFYVDPDEIRVIIGPNGAGKTTVLDLI 68 >gi|110835373|ref|YP_694232.1| branched-chain amino acid ABC transporter ATP-binding protein [Alcanivorax borkumensis SK2] gi|110648484|emb|CAL17960.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Alcanivorax borkumensis SK2] Length = 281 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 24 KLIFKLLDIEIS--HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 K I + DI +S F+ ++ L + G NG GKS++ + I Sbjct: 38 KNILYMEDITVSFDGFKAINDLTLYIKTGELRCIIGPNGAGKSTMMDVIT 87 >gi|16800473|ref|NP_470741.1| DNA repair and genetic recombination [Listeria innocua Clip11262] gi|16413878|emb|CAC96636.1| DNA repair and genetic recombination [Listeria innocua Clip11262] gi|313623865|gb|EFR93982.1| DNA repair protein RecN [Listeria innocua FSL J1-023] Length = 563 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|75760091|ref|ZP_00740153.1| ABC transporter ATP-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492402|gb|EAO55556.1| ABC transporter ATP-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 221 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%) Query: 40 FTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 + I F ++T + G+NG GKS+L E I + Sbjct: 10 YPNITITSFHPNVTFIIGENGTGKSTLLEGIAIALGFNAE 49 >gi|332711303|ref|ZP_08431235.1| DNA sulfur modification protein DndD [Lyngbya majuscula 3L] gi|332349852|gb|EGJ29460.1| DNA sulfur modification protein DndD [Lyngbya majuscula 3L] Length = 666 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 30 LDIEISHFRGFTEIQKIEF-------ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L++ + +F + Q I + + +V G NG GK+++ +AI YG+ + Sbjct: 4 LELVLENFGPYLGRQVINLCPKRDDNSRPIILVGGMNGGGKTTMMDAIRLALYGHRAQ 61 >gi|328946933|ref|YP_004364270.1| DNA replication and repair protein RecF [Treponema succinifaciens DSM 2489] gi|328447257|gb|AEB12973.1| DNA replication and repair protein RecF [Treponema succinifaciens DSM 2489] Length = 373 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + +FR I+ + G+NG GKS+L E++ + YG + R Sbjct: 1 MPFLSLSPYNFRNLCNEN-IDLSSKEIYFVGKNGQGKSNLLESLYYSAYGSSFRTHVDSE 59 Query: 87 IKKRSIKTPMPMCMAVPRCKYQ 108 + K K M + RC ++ Sbjct: 60 VIK---KNESEMSL---RCLFR 75 >gi|315577555|gb|EFU89746.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 712 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L I I +F+G +++ + + G N GK+++ +A W + + Sbjct: 12 ISLESIRIHNFKGISDLMIEPNGKSID-IFGDNDAGKTTIYDAFLWCLFNKDSK 64 >gi|315608787|ref|ZP_07883764.1| ATP-binding protein [Prevotella buccae ATCC 33574] gi|315249533|gb|EFU29545.1| ATP-binding protein [Prevotella buccae ATCC 33574] Length = 441 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 21/74 (28%) Query: 23 RKLIFKLLDIEISHFRGFTEIQKIEFADH---------------------LTIVNGQNGY 61 +K I + + +I +F F + + F +V G N Sbjct: 8 KKRIIMIQEFKIKNFLSFKDEVRFSFEASNDTFAETSQVVKINKNTRLLRFAVVYGYNAS 67 Query: 62 GKSSLSEAIEWLFY 75 GKS+L +A E+L Sbjct: 68 GKSNLLKAFEFLVG 81 >gi|300869534|ref|ZP_07114116.1| ATP binding protein [Oscillatoria sp. PCC 6506] gi|300332507|emb|CBN59314.1| ATP binding protein [Oscillatoria sp. PCC 6506] Length = 420 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEF-ADHLTIVNGQNGYGKSSLSEAIEWLF 74 K+ ++I+ FRG + +EF D ++ G NG GKSS+ + I L Sbjct: 1 MKVKRLKINAFRGI-DNLNLEFNPDEPIVIIGNNGVGKSSILDCIAILL 48 >gi|262282717|ref|ZP_06060485.1| DNA repair protein RecN [Streptococcus sp. 2_1_36FAA] gi|262262008|gb|EEY80706.1| DNA repair protein RecN [Streptococcus sp. 2_1_36FAA] Length = 552 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLHFDQGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGATKAEIE 65 >gi|251771200|gb|EES51781.1| conserved protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 1185 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 +L +++ + F + + ++ G N GKS+ A+ L +G+ Sbjct: 1 MRLDRLDLLAYGPFYDR-SLPLGPGFHLIYGPNEAGKSTTLRAVSSLLFGF 50 >gi|242374092|ref|ZP_04819666.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W1] gi|242348217|gb|EES39819.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W1] Length = 978 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 + +EI + F + KI F T + G+N GKS++ I + +G+ ++ Sbjct: 3 IKSLEIYGYGQFVQR-KINFNKGFTEIFGENEAGKSTVQAFIHSILFGFPTKK 54 >gi|240281885|gb|EER45388.1| DNA repair protein RAD50 [Ajellomyces capsulatus H143] Length = 1421 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + I R F + + I+F LT++ G NG GK+ E + + G Sbjct: 159 KIDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNGSGKTLCGEKEVLAQVKLSFKSVSGA 218 Query: 86 SI 87 + Sbjct: 219 RM 220 >gi|188577111|ref|YP_001914040.1| DNA repair protein RecN [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521563|gb|ACD59508.1| DNA repair protein RecN [Xanthomonas oryzae pv. oryzae PXO99A] Length = 554 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGTGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|157149943|ref|YP_001450000.1| DNA repair protein RecN [Streptococcus gordonii str. Challis substr. CH1] gi|157074737|gb|ABV09420.1| DNA repair protein RecN [Streptococcus gordonii str. Challis substr. CH1] Length = 552 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEISLHFDQGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 HGATKAEIE 65 >gi|84623567|ref|YP_450939.1| recombination protein N [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367507|dbj|BAE68665.1| recombination protein N [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 554 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGTGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|68536966|ref|YP_251670.1| putative ABC transport system, ATP-binding protein [Corynebacterium jeikeium K411] gi|260579311|ref|ZP_05847193.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium jeikeium ATCC 43734] gi|68264565|emb|CAI38053.1| putative ABC transport system, ATP-binding protein [Corynebacterium jeikeium K411] gi|258602440|gb|EEW15735.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium jeikeium ATCC 43734] Length = 263 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIE 71 F + +T + G NG GKS+L + Sbjct: 29 FNEGVTGILGPNGSGKSTLLNIVT 52 >gi|304407037|ref|ZP_07388691.1| DNA repair protein RecN [Paenibacillus curdlanolyticus YK9] gi|304344024|gb|EFM09864.1| DNA repair protein RecN [Paenibacillus curdlanolyticus YK9] Length = 568 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 23/62 (37%) Query: 42 EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMA 101 E + F + ++ G+ G GKS L +A+ + G + I+ M Sbjct: 14 EEVTVSFHNGFHVLTGETGAGKSILIDALSLVVGGRGHAELVRHGCDRSEIEAVFDMAAT 73 Query: 102 VP 103 P Sbjct: 74 HP 75 >gi|256821845|ref|YP_003145808.1| RloA protein [Kangiella koreensis DSM 16069] gi|256795384|gb|ACV26040.1| RloA protein [Kangiella koreensis DSM 16069] Length = 422 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 23/82 (28%) Query: 29 LLDIEISHFRGFTEIQKIE---------FADHL--------------TIVNGQNGYGKSS 65 L++ +S+F+ + + F ++ ++ G N GKS+ Sbjct: 2 LIEFSVSNFKSYKNKETFSMLAESGTELFDSNVIKTHSVEDINLLSSAVIYGPNASGKSN 61 Query: 66 LSEAIEWLFYGYTQRRKHGDSI 87 L EA++ + + R+ GD + Sbjct: 62 LFEAMDTMIDLIIETRQRGDKL 83 >gi|239948452|ref|ZP_04700205.1| DNA replication and repair protein RecF [Rickettsia endosymbiont of Ixodes scapularis] gi|239922728|gb|EER22752.1| DNA replication and repair protein RecF [Rickettsia endosymbiont of Ixodes scapularis] Length = 360 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 L + + ++R F ++ ++ + I+ G+NG GK+++ EAI + G + Sbjct: 4 IFLHSLSLENYRNFKNLE-LKTDNTPIILIGENGSGKTNILEAISLFYPGRGLKSAKLAY 62 Query: 87 IKKRSIK 93 I K S Sbjct: 63 ICKTSED 69 >gi|168490857|ref|ZP_02715000.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|183574607|gb|EDT95135.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADHL-TIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + IF+ +++I + R T+ F + + G NG GK++L +++ + + Sbjct: 322 RFIFQAKNLQIGYDRPLTKPLNFTFERNQKVAIIGANGIGKTTLLKSLLGIISPIAGEVE 381 Query: 83 HGDSIKKRSIKTPMP 97 GD ++ + + Sbjct: 382 RGDYLELGYFEQEVE 396 >gi|168205605|ref|ZP_02631610.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|170662908|gb|EDT15591.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] Length = 922 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK 57 >gi|167856191|ref|ZP_02478928.1| probable ATP-binding protein NMA0346 [Haemophilus parasuis 29755] gi|167852680|gb|EDS23957.1| probable ATP-binding protein NMA0346 [Haemophilus parasuis 29755] Length = 343 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSL---------SEAIEWLFYGYTQ 79 L + + +F F E + F+ HL ++ G+NG GKS + A + Sbjct: 2 LKKLVLKNFTVFNE-VDLNFSPHLNVIIGENGMGKSHILKLAYSLIACNASAFSVSKTQM 60 Query: 80 RRKHGDSIK 88 ++ + D + Sbjct: 61 QKNYADKLI 69 >gi|163842018|ref|YP_001626423.1| putative ABC transporter ATP-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162955494|gb|ABY25009.1| ABC transporter ATP-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 560 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 38 RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRS 91 + F + I+ F + + V G NG GK++L + I + K GDS+K Sbjct: 331 KSFGDRTLIDGLTFTLPRNGIVGVIGPNGVGKTTLFKTITGVEALDGGELKIGDSVKISY 390 Query: 92 IKTPM 96 + Sbjct: 391 VDQSR 395 >gi|160945681|ref|ZP_02092907.1| hypothetical protein FAEPRAM212_03212 [Faecalibacterium prausnitzii M21/2] gi|158443412|gb|EDP20417.1| hypothetical protein FAEPRAM212_03212 [Faecalibacterium prausnitzii M21/2] Length = 577 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 +L +E+ +FR + I F + LT + G+N GK+++ A+ Sbjct: 1 MRLKSVEVENFRAI-KKCSIRFNE-LTALVGENNSGKTAILRAL 42 >gi|94309943|ref|YP_583153.1| DNA repair protein RecN [Cupriavidus metallidurans CH34] gi|93353795|gb|ABF07884.1| recombination and repair protein [Cupriavidus metallidurans CH34] Length = 589 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I F + ++F+ T+ G+ G GKS L +A+ + + Sbjct: 2 LRSLSIRDF-VIVDTLDLDFSAGFTVFTGETGAGKSILIDALALVLGERADAGVVREGAA 60 Query: 89 KRSI 92 + SI Sbjct: 61 RASI 64 >gi|330964394|gb|EGH64654.1| ABC transporter family protein 61 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 513 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 LI K L + + R F+ T + G NG GKS L++ Sbjct: 8 LIIKDLTLRLPDGRPLFSGLNATFSRQFTGIVGPNGSGKSMLAQ 51 >gi|330961459|gb|EGH61719.1| ABC transporter family protein 61 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 515 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSE 68 LI K L + + R F+ T + G NG GKS L++ Sbjct: 8 LIIKDLTLRLPDGRPLFSGLNATFSRQFTGIVGPNGSGKSMLAQ 51 >gi|331271100|ref|YP_004385809.1| transporter [Clostridium botulinum BKT015925] gi|329127595|gb|AEB77537.1| transporter [Clostridium botulinum BKT015925] Length = 276 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +I+ R F K+E +T G+NG GKS+L EAI L YG+ D Sbjct: 57 QIASIRNFN---KLEIETPITFFVGENGTGKSTLLEAIA-LNYGFNAEGGSLDY 106 >gi|325851995|ref|ZP_08171078.1| DNA replication and repair protein RecF [Prevotella denticola CRIS 18C-A] gi|325484551|gb|EGC87467.1| DNA replication and repair protein RecF [Prevotella denticola CRIS 18C-A] Length = 368 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 +L + I +++ + + + L G NG GK++L +A+ +L + + Sbjct: 1 MQLDRLSIINYKNI-QTATLNLSGKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSE 59 Query: 87 IKKRSIK 93 + + Sbjct: 60 VMRHDAD 66 >gi|322790809|gb|EFZ15521.1| hypothetical protein SINV_07769 [Solenopsis invicta] Length = 318 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 17/104 (16%) Query: 16 SLTSYYARKLIFKLLDIEISHFRGFTE----------IQKIEFADHLTIVNGQNGYGKSS 65 + YY +K +F L +I + + I+ DHL ++ G NG GKSS Sbjct: 52 TFPKYYLQKSLFLLSTFQIVRLESYGVLVLKRSRDKLQEYIKPGDHL-LITGPNGCGKSS 110 Query: 66 LSEAIE--WLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCKY 107 L I W Y T R ++ S + P +P+ Y Sbjct: 111 LFRIISGLWPVYDGTLIR----PAERNSSEHSRPALFYIPQKPY 150 >gi|312076882|ref|XP_003141059.1| hypothetical protein LOAG_05474 [Loa loa] gi|307763776|gb|EFO23010.1| hypothetical protein LOAG_05474 [Loa loa] Length = 1079 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 28 KLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 ++ IE+ +F E KI F + + G NG GKS+L A+ G + + G Sbjct: 25 RIASIELFNFMCH-ESLKINFDVLNRNCFFIGGSNGSGKSALFAALNMGLGGRGSQNERG 83 Query: 85 DSIKK 89 +++K+ Sbjct: 84 NAVKQ 88 >gi|259046630|ref|ZP_05737031.1| DNA repair protein RecN [Granulicatella adiacens ATCC 49175] gi|259036795|gb|EEW38050.1| DNA repair protein RecN [Granulicatella adiacens ATCC 49175] Length = 573 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + +I I +F E + F +T++ G+ G GKS + +A+ L Sbjct: 5 IQEIYIKNF-AIIEEVQCTFEKGMTVLTGETGAGKSIIIDAVGLLIGE 51 >gi|154252496|ref|YP_001413320.1| hypothetical protein Plav_2049 [Parvibaculum lavamentivorans DS-1] gi|154156446|gb|ABS63663.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1] Length = 631 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 19/29 (65%) Query: 48 FADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 F + I+ G+NG GKS++++ I ++ G Sbjct: 25 FHAGVNIIRGENGSGKSTIADFIFYILGG 53 >gi|148544490|ref|YP_001271860.1| hypothetical protein Lreu_1266 [Lactobacillus reuteri DSM 20016] gi|184153855|ref|YP_001842196.1| hypothetical protein LAR_1200 [Lactobacillus reuteri JCM 1112] gi|227363082|ref|ZP_03847218.1| DNA repair ATPase [Lactobacillus reuteri MM2-3] gi|325682811|ref|ZP_08162327.1| exopolyphosphatase [Lactobacillus reuteri MM4-1A] gi|148531524|gb|ABQ83523.1| conserved hypothetical protein [Lactobacillus reuteri DSM 20016] gi|183225199|dbj|BAG25716.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227071903|gb|EEI10190.1| DNA repair ATPase [Lactobacillus reuteri MM2-3] gi|324977161|gb|EGC14112.1| exopolyphosphatase [Lactobacillus reuteri MM4-1A] Length = 830 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ I F + + Q +F + I+ G N GK++L + + +G+ R Sbjct: 1 MKIKKAHIDGFGKWHD-QDFDFTANPQIIYGPNEAGKTTLMAFLVSILFGFADGRGK 56 >gi|194466675|ref|ZP_03072662.1| conserved hypothetical protein [Lactobacillus reuteri 100-23] gi|194453711|gb|EDX42608.1| conserved hypothetical protein [Lactobacillus reuteri 100-23] Length = 830 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 K+ I F + + Q +F + I+ G N GK++L + + +G+ R Sbjct: 1 MKIKKAHIDGFGKWHD-QDFDFTANPQIIYGPNEAGKTTLMAFLVSILFGFADGRGK 56 >gi|301058137|ref|ZP_07199189.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447769|gb|EFK11482.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 236 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%) Query: 36 HFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTP 95 + + E + + F +T + G+NG GKS+L A+ + ++ GD ++ + Sbjct: 22 NLKILQETKGLTFTSPVTFLVGENGAGKSTLLRALCHKCGIHIWEKERGDRMESNPYEEL 81 Query: 96 MPMCMAV 102 + + M V Sbjct: 82 LYLYMDV 88 >gi|304316771|ref|YP_003851916.1| DNA repair protein RecN [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778273|gb|ADL68832.1| DNA repair protein RecN [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 570 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L + I + E +I+F D L I+ G+ G GKS + +++ L G R + D I+ Sbjct: 2 ILALSIKNI-ALIEEAEIKFEDGLNILTGETGAGKSIVIDSMMLLLGG----RANKDIIR 56 Query: 89 KRSIKTPMP 97 + K + Sbjct: 57 NGTQKATVE 65 >gi|254435256|ref|ZP_05048763.1| hypothetical protein NOC27_2319 [Nitrosococcus oceani AFC27] gi|207088367|gb|EDZ65639.1| hypothetical protein NOC27_2319 [Nitrosococcus oceani AFC27] Length = 362 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD--HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++I +FR + IE + I++G N GK+S EAI L G + R Sbjct: 1 MHITHLDIRNFRNL---KHIELHPSKGVNILSGANSSGKTSFLEAIYLLGLGRSFRTVQ 56 >gi|34419309|ref|NP_899322.1| recombination endonuclease subunit [Vibrio phage KVP40] gi|34332990|gb|AAQ64145.1| recombination endonuclease subunit [Vibrio phage KVP40] Length = 745 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%) Query: 53 TIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 T++ G NG GKS+ EAI + YG R I K + Sbjct: 30 TLITGTNGAGKSTYIEAICFALYGKPFRNIKKTQIVNAVNKKKL 73 >gi|18311141|ref|NP_563075.1| hypothetical protein CPE2159 [Clostridium perfringens str. 13] gi|18145824|dbj|BAB81865.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 922 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK 57 >gi|328885699|emb|CCA58938.1| hypothetical protein SVEN_5652 [Streptomyces venezuelae ATCC 10712] Length = 612 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 ++ + + +FRG + D +++ G N GKS++ E +E + Sbjct: 1 MQVRRVVLENFRGVKSGTIL--LDGHSLLVGSNSVGKSTVCEGLELVLG 47 >gi|172040015|ref|YP_001799729.1| putative iron ABC transport system, ATP-binding protein [Corynebacterium urealyticum DSM 7109] gi|171851319|emb|CAQ04295.1| putative iron ABC transport system, ATP-binding protein [Corynebacterium urealyticum DSM 7109] Length = 278 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 39 GFTEIQKI-----EFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 G+ + I +F +T + G NG GKS+L A+ L Sbjct: 33 GYGDRTVIEGLDVDFPRGQITTIIGPNGCGKSTLLRAMSRLL 74 >gi|157363700|ref|YP_001470467.1| ABC transporter related [Thermotoga lettingae TMO] gi|157314304|gb|ABV33403.1| ABC transporter related [Thermotoga lettingae TMO] Length = 212 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG-YTQRRKHGDSIKKRSIKTPMPMCMAV 102 +K E + + + G +G GK++ + +L+ G + R G+ + ++ + V Sbjct: 22 EKFEIENGIVGITGPSGSGKTTFLLNLAFLYTGRWKIFRFMGEDVSNEGLQRLRKIVTYV 81 Query: 103 PR 104 P+ Sbjct: 82 PQ 83 >gi|146303588|ref|YP_001190904.1| ABC transporter-like protein [Metallosphaera sedula DSM 5348] gi|145701838|gb|ABP94980.1| ABC transporter related protein [Metallosphaera sedula DSM 5348] Length = 208 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 R IE + + +V GQNG GK++L +I G + + + Sbjct: 5 RSQLSSMDIELSKGVNLVLGQNGAGKTTLLRSIIESLRGSSVHKGY 50 >gi|33416919|gb|AAH55623.1| Zgc:66377 protein [Danio rerio] Length = 418 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ I + +F + + L ++ G NG GKSS+ AI G T GD + Sbjct: 42 IVRITMHNFLTYDHSEVFP-GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKV 99 >gi|68536864|ref|YP_251569.1| putative iron ABC transport system, ATP-binding protein [Corynebacterium jeikeium K411] gi|260579218|ref|ZP_05847107.1| ferrichrome ATP binding cassette transporter, ABC protein FhuC [Corynebacterium jeikeium ATCC 43734] gi|311740333|ref|ZP_07714163.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium pseudogenitalium ATCC 33035] gi|68264463|emb|CAI37951.1| putative iron ABC transport system, ATP-binding protein [Corynebacterium jeikeium K411] gi|258602646|gb|EEW15934.1| ferrichrome ATP binding cassette transporter, ABC protein FhuC [Corynebacterium jeikeium ATCC 43734] gi|311304616|gb|EFQ80689.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 278 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 39 GFTEIQKI-----EFADH-LTIVNGQNGYGKSSLSEAIEWLF 74 G+ + I +F +T + G NG GKS+L A+ L Sbjct: 33 GYGDRTVIEGLDVDFPRGQITTIIGPNGCGKSTLLRAMSRLL 74 >gi|66805443|ref|XP_636454.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] gi|74852390|sp|Q54I56|SMC6_DICDI RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6 gi|60464832|gb|EAL62951.1| structural maintenance of chromosome protein [Dictyostelium discoideum AX4] Length = 1185 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + I + +F K++F ++ + G+NG GKS++ A+ G + Sbjct: 149 IESITLENFMCHRHF-KLDFCSNVNFIAGENGSGKSAVLIALIVCLGAKAGFTNRGSKLS 207 Query: 89 KR 90 Sbjct: 208 DL 209 >gi|225454979|ref|XP_002278113.1| PREDICTED: similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding [Vitis vinifera] Length = 1057 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L I + +F + +Q IE + L V GQNG GKS++ A+ F + + ++K Sbjct: 22 ILKIRLENFMCHSSLQ-IELGEWLNFVTGQNGSGKSAILTALCVAFGSRAKETQRATTLK 80 Query: 89 K 89 + Sbjct: 81 E 81 >gi|110802248|ref|YP_699435.1| hypothetical protein CPR_2126 [Clostridium perfringens SM101] gi|110682749|gb|ABG86119.1| conserved hypothetical protein [Clostridium perfringens SM101] Length = 922 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK 57 >gi|5880614|gb|AAD54769.1|AF120932_1 SMC-like protein [Arabidopsis thaliana] gi|5880616|gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] Length = 1055 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 +L I++ +F + +Q IEF + + + GQNG GKS++ A+ F + + ++K Sbjct: 22 ILRIKVENFMCHSYLQ-IEFGEWVNFITGQNGSGKSAILTALCIAFGCRARGTQRAATLK 80 Query: 89 K 89 Sbjct: 81 D 81 >gi|87123352|ref|ZP_01079203.1| DNA repair protein RecN [Synechococcus sp. RS9917] gi|86169072|gb|EAQ70328.1| DNA repair protein RecN [Synechococcus sp. RS9917] Length = 563 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + + + + +++F T++ G+ G GKS L +A++ + G Sbjct: 2 LTGLRLQNI-ALIDSLELDFEQGFTVLTGETGAGKSILLDALDAVLGG 48 >gi|84687366|ref|ZP_01015245.1| hypothetical protein 1099457000267_RB2654_22973 [Maritimibacter alkaliphilus HTCC2654] gi|84664663|gb|EAQ11148.1| hypothetical protein RB2654_22973 [Rhodobacterales bacterium HTCC2654] Length = 543 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 + I ++R + + F + L ++ G N GKS+L EAI G Sbjct: 14 IQRAVIRNYRCLKQAN-VTFNNELNVIVGNNESGKSTLLEAIHLALTGQ 61 >gi|83949697|ref|ZP_00958430.1| molybdate ABC transporter, ATP-binding protein [Roseovarius nubinhibens ISM] gi|83837596|gb|EAP76892.1| molybdate ABC transporter, ATP-binding protein [Roseovarius nubinhibens ISM] Length = 371 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 35 SHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 F GFT ++ +T + G +G GK+S+ A+ L R GD + Sbjct: 9 KSFPGFTLEAALQAGAGVTALFGPSGSGKTSVVNAVAGLLRPDAGRIALGDRVLFDGAAG 68 Query: 95 PM 96 M Sbjct: 69 RM 70 >gi|332297897|ref|YP_004439819.1| DNA repair protein RecN [Treponema brennaborense DSM 12168] gi|332181000|gb|AEE16688.1| DNA repair protein RecN [Treponema brennaborense DSM 12168] Length = 582 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L D+ IS F E ++F T+++G+ G GKS L A+ +L Sbjct: 2 LEDVSISDF-ALIESVSLDFNGGFTVLSGETGAGKSILIGALSFLLG 47 >gi|329667058|gb|AEB93006.1| DNA repair protein RecN [Lactobacillus johnsonii DPC 6026] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|282850886|ref|ZP_06260260.1| putative DNA repair protein RecN [Lactobacillus gasseri 224-1] gi|282557838|gb|EFB63426.1| putative DNA repair protein RecN [Lactobacillus gasseri 224-1] Length = 386 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|268319204|ref|YP_003292860.1| DNA repair protein recN [Lactobacillus johnsonii FI9785] gi|262397579|emb|CAX66593.1| DNA repair protein recN [Lactobacillus johnsonii FI9785] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|262164060|ref|ZP_06031799.1| hypothetical protein VMA_000501 [Vibrio mimicus VM223] gi|262027588|gb|EEY46254.1| hypothetical protein VMA_000501 [Vibrio mimicus VM223] Length = 768 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 11/92 (11%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL +E+S+FR ++ + TI+ G N GK+S+ A+ + S Sbjct: 14 IKLRFVELSNFRRLG-KVQLNIDEKTTILVGANNSGKTSILAALRHFLADGSPFSAFDIS 72 Query: 87 IKKRSI----------KTPMPMCMAVPRCKYQ 108 I K S T P+ + P K++ Sbjct: 73 ISKWSKLRALGKVWEDLTEDPLTVTEPEEKWK 104 >gi|238852562|ref|ZP_04642972.1| DNA repair protein RecN [Lactobacillus gasseri 202-4] gi|238834708|gb|EEQ26935.1| DNA repair protein RecN [Lactobacillus gasseri 202-4] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|227890282|ref|ZP_04008087.1| DNA repair protein RecN [Lactobacillus johnsonii ATCC 33200] gi|227849096|gb|EEJ59182.1| DNA repair protein RecN [Lactobacillus johnsonii ATCC 33200] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|237654580|ref|YP_002890894.1| urea ABC transporter ATP-binding protein UrtD [Thauera sp. MZ1T] gi|237625827|gb|ACR02517.1| urea ABC transporter, ATP-binding protein UrtD [Thauera sp. MZ1T] Length = 288 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIE 71 + K+I L DI +S F GF + K+ A L + G NG GK+++ + I Sbjct: 43 SHKVILYLDDITVS-FDGFRALNKLSLTIDAGELRCIIGPNGAGKTTMMDVIT 94 >gi|212715875|ref|ZP_03324003.1| hypothetical protein BIFCAT_00782 [Bifidobacterium catenulatum DSM 16992] gi|212661242|gb|EEB21817.1| hypothetical protein BIFCAT_00782 [Bifidobacterium catenulatum DSM 16992] Length = 238 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L D +S I ++ F ++T + G+NG GKS+L E + + + + Sbjct: 16 LTDSYVSRIPSLRSIDELRFHKNVTFLVGENGSGKSTLLEGVAVACGFNAEGGTR--NYR 73 Query: 89 KRSIKTPMPMCMAV 102 + + A+ Sbjct: 74 FSTYDDTSDLAKAM 87 >gi|149924750|ref|ZP_01913096.1| hypothetical protein PPSIR1_14490 [Plesiocystis pacifica SIR-1] gi|149814396|gb|EDM73991.1| hypothetical protein PPSIR1_14490 [Plesiocystis pacifica SIR-1] Length = 1046 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 +L D + R F + +++G NG GKSSL EA+E + G +R Sbjct: 281 VELEDYRLPGLRRFVLDPRARLH----LLHGHNGSGKSSLVEALELMLTGSIER 330 >gi|116331275|ref|YP_800993.1| ATP-binding protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124964|gb|ABJ76235.1| ATP-binding protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 622 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 K I +L ++ S+ + F + + G NG GKS+L + I Sbjct: 313 KKILELKNLHKSYHKSIISNFSYTFKNGERIGIVGPNGSGKSTLLDII 360 >gi|116328550|ref|YP_798270.1| ATP-binding protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121294|gb|ABJ79337.1| ATP-binding protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 622 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 24 KLIFKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAI 70 K I +L ++ S+ + F + + G NG GKS+L + I Sbjct: 313 KKILELKNLHKSYHKSIISNFSYTFKNGERIGIVGPNGSGKSTLLDII 360 >gi|116629413|ref|YP_814585.1| DNA repair ATPase [Lactobacillus gasseri ATCC 33323] gi|116094995|gb|ABJ60147.1| DNA replication and repair protein RecN [Lactobacillus gasseri ATCC 33323] Length = 562 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 5 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 54 >gi|42519417|ref|NP_965347.1| DNA repair protein RecN [Lactobacillus johnsonii NCC 533] gi|41583705|gb|AAS09313.1| DNA repair protein RecN [Lactobacillus johnsonii NCC 533] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F + +T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIKNF-AIIKTLKVRFQEKMTVLIGETGAGKSIIIDAVSLLLGSRAQ 51 >gi|329922944|ref|ZP_08278460.1| hypothetical protein HMPREF9412_5024 [Paenibacillus sp. HGF5] gi|328941717|gb|EGG38002.1| hypothetical protein HMPREF9412_5024 [Paenibacillus sp. HGF5] Length = 633 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 +L +EI FR T+ + F+D T + G+N GKSS+ A+ L +R + Sbjct: 1 MQLYKLEIEGFRRHTD-TNVLFSDA-TFLIGENNVGKSSVLAALNILL--NDVKRVSDE 55 >gi|319947467|ref|ZP_08021699.1| DNA repair protein RecN [Streptococcus australis ATCC 700641] gi|319746407|gb|EFV98668.1| DNA repair protein RecN [Streptococcus australis ATCC 700641] Length = 554 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 LL+I I +F E + F +T++ G+ G GKS + +A+ + R D I+ Sbjct: 2 LLEISIKNF-AIIEEIALNFETGMTVLTGETGAGKSIIIDAMNMMLGS----RATTDVIR 56 Query: 89 KRSIKTPMPMCMAV 102 + K + A+ Sbjct: 57 HGAPKAEIEGLFAI 70 >gi|308187534|ref|YP_003931665.1| siderophore ABC transporter, ATP- binding subunit [Pantoea vagans C9-1] gi|308058044|gb|ADO10216.1| putative siderophore ABC transporter, ATP- binding subunit [Pantoea vagans C9-1] Length = 262 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +T++ G NG GKS+L A+ L G + +G+ + Sbjct: 33 ITVLLGPNGCGKSTLLRALAGLNKGQGEMWLNGEDL 68 >gi|304397484|ref|ZP_07379362.1| ABC transporter related protein [Pantoea sp. aB] gi|304355102|gb|EFM19471.1| ABC transporter related protein [Pantoea sp. aB] Length = 262 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 +T++ G NG GKS+L A+ L G + +G+ + Sbjct: 33 ITVLLGPNGCGKSTLLRALAGLNKGQGEMWLNGEDL 68 >gi|299532792|ref|ZP_07046179.1| putative ATP-binding subunit [Comamonas testosteroni S44] gi|298719016|gb|EFI59986.1| putative ATP-binding subunit [Comamonas testosteroni S44] Length = 291 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Query: 26 IFKLLDIEISHFRGFTEIQ--KIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 I L D+ +S F GF I ++ A L + G NG GK+++ + I + Sbjct: 50 ILYLEDVHVS-FDGFKAINGLSLDIAPGELRCIIGPNGAGKTTMMDIITGKTRPDSGTVF 108 Query: 83 HGDSIKKRSIKTPMPMCMAVPRCKYQ 108 G +I K P M + R K+Q Sbjct: 109 FGSTIDLLRFKEPEIAAMGIGR-KFQ 133 >gi|241763538|ref|ZP_04761590.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] gi|241367269|gb|EER61609.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] Length = 703 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 KL I IS+F+G + T + G+N GKSS+ +AI + Sbjct: 1 MKLKHIAISNFKGIQADNLS--PESFTCLVGENNAGKSSVMQAIVFAL 46 >gi|226289954|gb|EEH45438.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb18] Length = 1299 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 28 KLLDIEISHFRGF--TEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 K+ + I R F T + I+F LT++ G NG GK+ E + + G Sbjct: 29 KIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTLCGEKEVLAQVKLSFKSITGA 88 Query: 86 SI 87 + Sbjct: 89 KM 90 >gi|254994016|ref|ZP_05276206.1| recombination protein F [Listeria monocytogenes FSL J2-064] Length = 352 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG-DSIKKRSIKTPMPMCMA 101 +EF+ + + G+N GK++L EA+ L + R + D I + M +A Sbjct: 1 LEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKDFIMWEKEEAKMEGRIA 57 >gi|225570019|ref|ZP_03779044.1| hypothetical protein CLOHYLEM_06114 [Clostridium hylemonae DSM 15053] gi|225161489|gb|EEG74108.1| hypothetical protein CLOHYLEM_06114 [Clostridium hylemonae DSM 15053] Length = 616 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ D+ I +F+ ++ I+ ++ I+ G+N GK+++ +AI + Y R Sbjct: 1 MQITDLRIRNFKSIRDMH-IQGIENALILVGKNNTGKTAVLDAIRAVGGSYEISR 54 >gi|40643205|emb|CAE14781.1| unnamed protein product [Leptospira phage LE1] Length = 779 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 K+++I+ F E D + G NG GK++L + I FYG T R Sbjct: 1 MKIIEIKNKGSIPFPEEIVWRPGDDGKVAIVGDNGSGKTTLLDTIAMAFYGVTPNR 56 >gi|15606017|ref|NP_213394.1| recombination protein RecN [Aquifex aeolicus VF5] gi|11134437|sp|O66834|RECN_AQUAE RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|2983189|gb|AAC06789.1| recombination protein RecN [Aquifex aeolicus VF5] Length = 520 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 L + I +F F ++EF L ++ G+ G GKS AIE+L Sbjct: 2 LGRLYIQNF-FFIRDVEVEFERGLNVITGETGTGKSMTISAIEFLMGKQ 49 >gi|329935554|ref|ZP_08285385.1| iron-siderophore uptake system ATP-binding protein [Streptomyces griseoaurantiacus M045] gi|329304968|gb|EGG48837.1| iron-siderophore uptake system ATP-binding protein [Streptomyces griseoaurantiacus M045] Length = 292 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKR 90 R E +E D+ T++ G N GKS+L A+ + R + + Sbjct: 16 RVIAERLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPNEGRVLLDGQVIQS 69 >gi|329919884|ref|ZP_08276822.1| DNA repair protein RecN [Lactobacillus iners SPIN 1401G] gi|328936974|gb|EGG33404.1| DNA repair protein RecN [Lactobacillus iners SPIN 1401G] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|325911839|ref|ZP_08174243.1| DNA repair protein RecN [Lactobacillus iners UPII 143-D] gi|325476345|gb|EGC79507.1| DNA repair protein RecN [Lactobacillus iners UPII 143-D] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|315653405|ref|ZP_07906327.1| DNA repair protein RecN [Lactobacillus iners ATCC 55195] gi|315489330|gb|EFU78970.1| DNA repair protein RecN [Lactobacillus iners ATCC 55195] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|312871883|ref|ZP_07731967.1| DNA repair protein RecN [Lactobacillus iners LEAF 3008A-a] gi|312872491|ref|ZP_07732560.1| DNA repair protein RecN [Lactobacillus iners LEAF 2062A-h1] gi|311092073|gb|EFQ50448.1| DNA repair protein RecN [Lactobacillus iners LEAF 2062A-h1] gi|311092605|gb|EFQ50965.1| DNA repair protein RecN [Lactobacillus iners LEAF 3008A-a] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|312874413|ref|ZP_07734443.1| DNA repair protein RecN [Lactobacillus iners LEAF 2052A-d] gi|311090025|gb|EFQ48439.1| DNA repair protein RecN [Lactobacillus iners LEAF 2052A-d] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|312874557|ref|ZP_07734582.1| DNA repair protein RecN [Lactobacillus iners LEAF 2053A-b] gi|311089948|gb|EFQ48367.1| DNA repair protein RecN [Lactobacillus iners LEAF 2053A-b] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|309809454|ref|ZP_07703312.1| DNA repair protein RecN [Lactobacillus iners SPIN 2503V10-D] gi|308170126|gb|EFO72161.1| DNA repair protein RecN [Lactobacillus iners SPIN 2503V10-D] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|309808804|ref|ZP_07702689.1| DNA repair protein RecN [Lactobacillus iners LactinV 01V1-a] gi|325913510|ref|ZP_08175876.1| DNA repair protein RecN [Lactobacillus iners UPII 60-B] gi|308167930|gb|EFO70063.1| DNA repair protein RecN [Lactobacillus iners LactinV 01V1-a] gi|325477279|gb|EGC80425.1| DNA repair protein RecN [Lactobacillus iners UPII 60-B] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|309806780|ref|ZP_07700771.1| DNA repair protein RecN [Lactobacillus iners LactinV 03V1-b] gi|308166829|gb|EFO69017.1| DNA repair protein RecN [Lactobacillus iners LactinV 03V1-b] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|309805482|ref|ZP_07699527.1| DNA repair protein RecN [Lactobacillus iners LactinV 09V1-c] gi|308165133|gb|EFO67371.1| DNA repair protein RecN [Lactobacillus iners LactinV 09V1-c] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|309804247|ref|ZP_07698324.1| DNA repair protein RecN [Lactobacillus iners LactinV 11V1-d] gi|308163650|gb|EFO65920.1| DNA repair protein RecN [Lactobacillus iners LactinV 11V1-d] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|259501560|ref|ZP_05744462.1| DNA repair protein RecN [Lactobacillus iners DSM 13335] gi|302191466|ref|ZP_07267720.1| DNA repair protein [Lactobacillus iners AB-1] gi|259167078|gb|EEW51573.1| DNA repair protein RecN [Lactobacillus iners DSM 13335] Length = 559 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L++++I +F + K+ F +++T++ G+ G GKS + +A+ L Q Sbjct: 2 LVELDIQNF-AVIKSLKVSFKENMTVLIGETGAGKSIIIDALSLLLGSRAQ 51 >gi|118593650|ref|ZP_01551026.1| hypothetical protein SIAM614_21370 [Stappia aggregata IAM 12614] gi|118433761|gb|EAV40422.1| hypothetical protein SIAM614_21370 [Stappia aggregata IAM 12614] Length = 1145 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA-----DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + +L + + F FT +F ++ G N GK++ EA L YG+ + Sbjct: 1 MMRLQKLNLDLFGHFTGK-SYDFGAKAGASDFHVIYGPNEAGKTTTMEAFLRLLYGFPHQ 59 Query: 81 RKHG 84 ++ Sbjct: 60 DQYD 63 >gi|73662544|ref|YP_301325.1| DNA repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495059|dbj|BAE18380.1| DNA repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 560 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L + I F + ++ F D LT+++G+ G GKS + +AI Sbjct: 2 LQTLSIKQF-AIIDELEVHFGDGLTVLSGETGAGKSIIIDAI 42 >gi|313888331|ref|ZP_07822002.1| RecF/RecN/SMC N-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845734|gb|EFR33124.1| RecF/RecN/SMC N-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 244 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Query: 28 KLLDI-EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L +I + +F+G I+ +T G+NG GKS+L EAI Sbjct: 20 YLRNIPSLKNFQG------IKIHKPVTFFVGENGSGKSTLLEAIAVALG 62 >gi|240849791|ref|YP_002971179.1| DNA replication and repair protein RecF [Bartonella grahamii as4aup] gi|240266914|gb|ACS50502.1| DNA replication and repair protein RecF [Bartonella grahamii as4aup] Length = 377 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 + S+ + + +L + ++ F I F+ + G NG GK++L EA+ +L G Sbjct: 1 MASHVHKVAVRQLKLLRYRNYPFFN----IHFSGQHVVFTGHNGAGKTNLLEALSFLSPG 56 Query: 77 YTQRR 81 RR Sbjct: 57 RGLRR 61 >gi|212636987|ref|YP_002313512.1| ATPase [Shewanella piezotolerans WP3] gi|212558471|gb|ACJ30925.1| ATPase, putative [Shewanella piezotolerans WP3] Length = 393 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 L + I+++R +I I A L +V G NG GKS+L +A+ Sbjct: 2 LTALAINNYRSLRDIT-IPLA-QLNLVTGANGSGKSNLYKALR 42 >gi|168215787|ref|ZP_02641412.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] gi|182382112|gb|EDT79591.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] Length = 922 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 + I + F G + ++IE D L I+ G+N GKS+L I+ + YG +R Sbjct: 3 IKKINVKSF-GKLKNKEIELKDGLNIIYGENESGKSTLQSFIKVMLYGVCNKRGKK 57 >gi|317473512|ref|ZP_07932804.1| DNA replication and repair protein recF [Anaerostipes sp. 3_2_56FAA] gi|316899023|gb|EFV21045.1| DNA replication and repair protein recF [Anaerostipes sp. 3_2_56FAA] Length = 468 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + G + QKI F+ L + G G GKSS+ EAI ++ Sbjct: 261 YIESLSFQG--GKFDGQKIIFSPELNTLIGIRGSGKSSILEAIRYILG 306 >gi|229013232|ref|ZP_04170373.1| ABC transporter, ATP-binding protein [Bacillus mycoides DSM 2048] gi|228747999|gb|EEL97863.1| ABC transporter, ATP-binding protein [Bacillus mycoides DSM 2048] Length = 241 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 44 QKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 Q + F ++T + G+NG GKS+L E I + Sbjct: 34 QSLAFHPNVTFIIGENGTGKSTLLEGIAVALGFNAE 69 >gi|255693357|ref|ZP_05417032.1| RecF protein [Bacteroides finegoldii DSM 17565] gi|260620834|gb|EEX43705.1| RecF protein [Bacteroides finegoldii DSM 17565] Length = 369 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKRISILNYKNL-EEVELGFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSSGNPIDSQNI 61 Query: 89 KRSIK 93 + Sbjct: 62 RHEQD 66 >gi|168216328|ref|ZP_02641953.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens NCTC 8239] gi|182381719|gb|EDT79198.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens NCTC 8239] Length = 256 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +T + G NG GKS+L ++I + + GD Sbjct: 18 DDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDK 63 >gi|30249450|ref|NP_841520.1| ABC transporter:DNA repair protein RecN [Nitrosomonas europaea ATCC 19718] gi|30138813|emb|CAD85390.1| ABC transporter:DNA repair protein RecN [Nitrosomonas europaea ATCC 19718] Length = 561 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L ++ I +F + + F T++ G+ G GKS L +A+E + Sbjct: 2 LQNLSIRNF-IIVDHIDLHFKSGFTVLTGETGAGKSILIDALELVLG 47 >gi|328793009|ref|XP_001122902.2| PREDICTED: structural maintenance of chromosomes protein 6-like [Apis mellifera] Length = 1248 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+ I I +F ++ I ++ + G+NG GKS++ A+ G S+ Sbjct: 41 KIKKILIRNFMCHDALEVI-LNPNVNFIIGRNGSGKSAILTALTVGLGARANVTSRGASV 99 Query: 88 K 88 K Sbjct: 100 K 100 >gi|319405348|emb|CBI78965.1| ATP-binding protein of hemin ABC transporter [Bartonella sp. AR 15-3] Length = 264 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAVPR 104 LTI+ G NG GKS+ +A+ + +G IK+ M +P+ Sbjct: 29 LTIIIGPNGSGKSTFIQALSGEIPYNGKMTLNGHDIKQTQANKIAMMRAVLPQ 81 >gi|300726122|ref|ZP_07059579.1| SMC domain protein [Prevotella bryantii B14] gi|299776592|gb|EFI73145.1| SMC domain protein [Prevotella bryantii B14] Length = 368 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 16/74 (21%) Query: 29 LLDIEISHFRGFTEIQKIEFA-------------DHLT---IVNGQNGYGKSSLSEAIEW 72 L + ++RGF + + + + + I+ G NG GKS+L AI Sbjct: 2 LTRFAVKNYRGFADNIEWNLSHPCSYSFNTDAIKNGIVKNGIIYGPNGSGKSNLGLAIFD 61 Query: 73 LFYGYTQRRKHGDS 86 + + + K D Sbjct: 62 IANHLSHKWKKPDY 75 >gi|168207952|ref|ZP_02633957.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens E str. JGS1987] gi|170660742|gb|EDT13425.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens E str. JGS1987] Length = 256 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +T + G NG GKS+L ++I + + GD Sbjct: 18 DDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDK 63 >gi|168214276|ref|ZP_02639901.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens CPE str. F4969] gi|169342594|ref|ZP_02863646.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens C str. JGS1495] gi|169299366|gb|EDS81433.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens C str. JGS1495] gi|170714231|gb|EDT26413.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens CPE str. F4969] Length = 256 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +T + G NG GKS+L ++I + + GD Sbjct: 18 DDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDK 63 >gi|167568668|ref|ZP_02361542.1| ABC transporter, ATP-binding protein [Burkholderia oklahomensis C6786] Length = 305 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 24 TDIAFRAGALTAIVGPNGSGKSTLLEALF 52 >gi|167561437|ref|ZP_02354353.1| ABC transporter, ATP-binding protein [Burkholderia oklahomensis EO147] Length = 308 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIE 71 I F LT + G NG GKS+L EA+ Sbjct: 27 TDIAFRAGALTAIVGPNGSGKSTLLEALF 55 >gi|304382370|ref|ZP_07364872.1| DNA repair protein RecN [Prevotella marshii DSM 16973] gi|304336487|gb|EFM02721.1| DNA repair protein RecN [Prevotella marshii DSM 16973] Length = 552 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F E I+F + +++ G+ G GKS + AI L + Sbjct: 2 LKQLYIKNF-TLIEELDIQFRNGFSVITGETGAGKSIILGAIGLLLGQRADSKTIKSGCD 60 Query: 89 KRSIK 93 K +I+ Sbjct: 61 KCTIE 65 >gi|239982267|ref|ZP_04704791.1| ABC transporter related protein [Streptomyces albus J1074] gi|291454112|ref|ZP_06593502.1| ABC transporter ATP-binding protein [Streptomyces albus J1074] gi|291357061|gb|EFE83963.1| ABC transporter ATP-binding protein [Streptomyces albus J1074] Length = 260 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 27 FKLLDIEISHFRGFT-EIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHG 84 ++ + + H R + +EF+ + + G NG GK+SL + R R G Sbjct: 6 IRVDGLHVRHRRTTALDGVDLEFSTGVHGLLGPNGAGKTSLIRVLATAAGPTAGRVRILG 65 Query: 85 DSIKKRSIKTP 95 + R+ +T Sbjct: 66 HDLADRAGRTE 76 >gi|294877700|ref|XP_002768083.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239870280|gb|EER00801.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1519 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 K L++E +FR + F D L ++ G NG GKS+ + G + R+ + Sbjct: 391 IKNLEVEFGNFRAVDGLDLTMFRDELFVLLGHNGAGKSTTIN----VLSGTIKPRRGDVT 446 Query: 87 IKKRSIKTPMPM 98 I R + MP+ Sbjct: 447 IFNREVPAEMPV 458 >gi|167837577|ref|ZP_02464460.1| putative amino acid ABC transporter, ATP-binding protein [Burkholderia thailandensis MSMB43] Length = 282 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 26 IFKLLDIEISHFRGFTEIQK----IEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 I L DIE+S F GF ++K I+ + L V G NG GK+++ + I + + Sbjct: 38 ILYLEDIEVS-FDGFRALKKLSLAIDVGE-LRCVIGPNGAGKTTMMDVITGKTRPDSGKA 95 Query: 82 KHGDSIKKRSIKTPMPMCMAVPRCKYQ 108 G ++ + P + R K+Q Sbjct: 96 FLGQTLDLARMNEPQIARAGIGR-KFQ 121 >gi|163855860|ref|YP_001630158.1| DNA repair protein [Bordetella petrii DSM 12804] gi|163259588|emb|CAP41889.1| DNA repair protein [Bordetella petrii] Length = 553 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L + I F E +I F T+ +G+ G GKS L +A+ Sbjct: 2 LRTLHIRDF-VIVEQAEIHFGAGFTVFSGETGAGKSILIDALALALGE 48 >gi|90408731|ref|ZP_01216878.1| DNA repair protein RecN [Psychromonas sp. CNPT3] gi|90310148|gb|EAS38286.1| DNA repair protein RecN [Psychromonas sp. CNPT3] Length = 558 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + + +F + +EF +T + G+ G GKS +A+ Sbjct: 2 LNQLTVQNF-AIVQFLTLEFKRGMTTITGETGAGKSIAIDALGLCLGERADANM 54 >gi|18309777|ref|NP_561711.1| iron(III) dicitrate ABC transporter [Clostridium perfringens str. 13] gi|168209243|ref|ZP_02634868.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens B str. ATCC 3626] gi|18144455|dbj|BAB80501.1| probable iron(III) dicitrate ABC transporter [Clostridium perfringens str. 13] gi|170712674|gb|EDT24856.1| ferrichrome transport ATP-binding protein FhuC [Clostridium perfringens B str. ATCC 3626] Length = 256 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +T + G NG GKS+L ++I + + GD Sbjct: 18 DDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDK 63 >gi|89095738|ref|ZP_01168632.1| hypothetical protein B14911_03374 [Bacillus sp. NRRL B-14911] gi|89089484|gb|EAR68591.1| hypothetical protein B14911_03374 [Bacillus sp. NRRL B-14911] Length = 98 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS 67 + IEI+ FR + E + + ++ G N GKS+L Sbjct: 6 IKQIEIAGFRSYKE-VIFDHLGSINLLIGPNNAGKSNLI 43 >gi|325923509|ref|ZP_08185159.1| hypothetical protein XGA_4199 [Xanthomonas gardneri ATCC 19865] gi|325546006|gb|EGD17210.1| hypothetical protein XGA_4199 [Xanthomonas gardneri ATCC 19865] Length = 1130 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%) Query: 22 ARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 AR F++ +++ ++ F+ + ++ A+ + G++G GKS+L +A+ L + Sbjct: 18 ARLQQFRMRRLQVHNWGTFSGLTEVPIAERGFLFVGRSGSGKSTLLDAMSALLTPPSI 75 >gi|322515079|ref|ZP_08068087.1| OLD family ATP-dependent endonuclease [Actinobacillus ureae ATCC 25976] gi|322118959|gb|EFX91136.1| OLD family ATP-dependent endonuclease [Actinobacillus ureae ATCC 25976] Length = 521 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L IEIS FRG ++ ++ ++ ++ G+N +GKSSL +A+ Sbjct: 1 MYLQQIEISGFRGINQLT-LQLRPNMVLI-GENAWGKSSLLDAL 42 >gi|320586476|gb|EFW99146.1| structural maintenance of chromosome complex subunit [Grosmannia clavigera kw1407] Length = 1137 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ + + +F + E + + L +V G NG GKSSL AI Sbjct: 95 IVKVFVENFVTY-ERAEFDPGPSLNMVIGPNGTGKSSLVCAI 135 >gi|312077872|ref|XP_003141492.1| hypothetical protein LOAG_05905 [Loa loa] gi|307763345|gb|EFO22579.1| hypothetical protein LOAG_05905 [Loa loa] Length = 1038 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG---- 84 + I +F + ++ +L ++ G NG GKS++ + G Sbjct: 21 ITQIIFENFLTYEHVEMFP-GPNLNVIVGPNGTGKSTIMCGLCLAVGGTPNLLGRSELLA 79 Query: 85 DSIKKRSIK 93 D IK S K Sbjct: 80 DYIKHGSEK 88 >gi|299132401|ref|ZP_07025596.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298592538|gb|EFI52738.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 694 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I I +FR E I+ D TI G N GK+S + AI F G + H + Sbjct: 1 MKLSGISIRNFRRL-ESVTIDIEDKETIFVGPNNSGKTS-ATAIFRTFLGERDFKIHDFA 58 Query: 87 IKKRS 91 + + + Sbjct: 59 VARMA 63 >gi|291517317|emb|CBK70933.1| hypothetical protein BIL_14710 [Bifidobacterium longum subsp. longum F8] Length = 439 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 13/55 (23%) Query: 29 LLDIEISHFRGFTEIQKI------EFAD-------HLTIVNGQNGYGKSSLSEAI 70 L+D S+FR F + Q F + +T + G N GKS+ +A+ Sbjct: 2 LIDFSFSNFRSFRDEQSFSMTRDERFTESNDSRQSPITAIYGANASGKSNFLKAM 56 >gi|254483122|ref|ZP_05096356.1| DNA repair protein RecN [marine gamma proteobacterium HTCC2148] gi|214036644|gb|EEB77317.1| DNA repair protein RecN [marine gamma proteobacterium HTCC2148] Length = 549 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 L I I+++ ++EFA +T++ G+ G GKS + +A+ Sbjct: 2 LSHISITNY-TIVSSLEMEFARGMTVITGETGAGKSIMLDALGLCLG 47 >gi|161524560|ref|YP_001579572.1| ATPase-like protein [Burkholderia multivorans ATCC 17616] gi|189350684|ref|YP_001946312.1| ATPase-like protein [Burkholderia multivorans ATCC 17616] gi|160341989|gb|ABX15075.1| ATPase-like protein [Burkholderia multivorans ATCC 17616] gi|189334706|dbj|BAG43776.1| ATPase-like protein [Burkholderia multivorans ATCC 17616] Length = 392 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + I+++R E+ + A LT+V G NG GKSS+ A+ L R Sbjct: 4 LNTLAIANYRSLRELT-VPLA-ALTVVTGPNGSGKSSVYRALRLLADTAQGR 53 >gi|300764687|ref|ZP_07074678.1| hypothetical protein LMHG_11079 [Listeria monocytogenes FSL N1-017] gi|300514573|gb|EFK41629.1| hypothetical protein LMHG_11079 [Listeria monocytogenes FSL N1-017] Length = 612 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + I E ++F + L I++G + GK+S+ AI++L+ Sbjct: 6 YYIERVTIKG--KDREDATVKFTNGLNIISGPSNTGKTSIVTAIDFLYG 52 >gi|116872799|ref|YP_849580.1| DNA repair protein RecN [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741677|emb|CAK20801.1| DNA repair protein RecN [Listeria welshimeri serovar 6b str. SLCC5334] Length = 563 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L ++ I +F E + F + +T++ G+ G GKS + +A+ L G R D I+ Sbjct: 2 LQEMTIKNF-AIIESLSLTFQEGMTVLTGETGAGKSIIIDALGLLVGG----RGSTDFIR 56 Query: 89 KRSIKTPMP 97 + + Sbjct: 57 HGEERLELQ 65 >gi|167039872|ref|YP_001662857.1| hypothetical protein Teth514_1227 [Thermoanaerobacter sp. X514] gi|300915376|ref|ZP_07132690.1| conserved hypothetical protein [Thermoanaerobacter sp. X561] gi|307724806|ref|YP_003904557.1| hypothetical protein Thet_1684 [Thermoanaerobacter sp. X513] gi|166854112|gb|ABY92521.1| hypothetical protein Teth514_1227 [Thermoanaerobacter sp. X514] gi|300888652|gb|EFK83800.1| conserved hypothetical protein [Thermoanaerobacter sp. X561] gi|307581867|gb|ADN55266.1| hypothetical protein Thet_1684 [Thermoanaerobacter sp. X513] Length = 592 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + +S G E +EF + L I+ G + GKS + E I++LF R Sbjct: 4 LYIKKLIVSG--GGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIR 55 >gi|76787292|ref|YP_329760.1| ABC transporter ATP-binding protein [Streptococcus agalactiae A909] gi|76562349|gb|ABA44933.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae A909] Length = 513 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAIEWLFYGY 77 S A + IF+ D++I + R T+ + F + I + G NG GK++L +++ + Sbjct: 317 SRTAGRFIFQAKDLQIGYDRALTKPLNLTFERNQKIAIVGANGIGKTTLLKSLLGIIPPI 376 Query: 78 TQRRKHGDSIKKRSIKTPMP 97 + + GD I + +P Sbjct: 377 SGNVERGDFIDLGYFEQEVP 396 >gi|23465800|ref|NP_696403.1| hypothetical protein BL1234 [Bifidobacterium longum NCC2705] gi|23326492|gb|AAN25039.1| hypothetical protein with similarity to AbiLI: abortive phage resistance protein [Bifidobacterium longum NCC2705] Length = 439 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 13/55 (23%) Query: 29 LLDIEISHFRGFTEIQKI------EFAD-------HLTIVNGQNGYGKSSLSEAI 70 L+D S+FR F + Q F + +T + G N GKS+ +A+ Sbjct: 2 LIDFSFSNFRSFRDEQSFSMTRDERFTESNDSRQSPITAIYGANASGKSNFLKAM 56 >gi|77406301|ref|ZP_00783366.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae H36B] gi|77175077|gb|EAO77881.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae H36B] Length = 513 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 19 SYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTI-VNGQNGYGKSSLSEAIEWLFYGY 77 S A + IF+ D++I + R T+ + F + I + G NG GK++L +++ + Sbjct: 317 SRTAGRFIFQAKDLQIGYDRALTKPLNLTFERNQKIAIVGANGIGKTTLLKSLLGIIPPI 376 Query: 78 TQRRKHGDSIKKRSIKTPMP 97 + + GD I + +P Sbjct: 377 SGNVERGDFIDLGYFEQEVP 396 >gi|325920213|ref|ZP_08182168.1| DNA replication and repair protein RecN [Xanthomonas gardneri ATCC 19865] gi|325549299|gb|EGD20198.1| DNA replication and repair protein RecN [Xanthomonas gardneri ATCC 19865] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|325914033|ref|ZP_08176389.1| DNA replication and repair protein RecN [Xanthomonas vesicatoria ATCC 35937] gi|325539802|gb|EGD11442.1| DNA replication and repair protein RecN [Xanthomonas vesicatoria ATCC 35937] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|319898584|ref|YP_004158677.1| ATP-binding protein of hemin ABC transporter [Bartonella clarridgeiae 73] gi|319402548|emb|CBI76091.1| ATP-binding protein of hemin ABC transporter [Bartonella clarridgeiae 73] Length = 264 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 LTI+ G NG GKS+ +A+ + +G IKK + M M AV Sbjct: 29 LTIIIGPNGSGKSTFIKALSGEIPYNGKMTLNGHDIKK-TQANKMAMIRAV 78 >gi|307825354|ref|ZP_07655573.1| DNA replication and repair protein RecF [Methylobacter tundripaludum SV96] gi|307733529|gb|EFO04387.1| DNA replication and repair protein RecF [Methylobacter tundripaludum SV96] Length = 358 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 LL ++I R + + I + + ++ G+N GKS+L EAI ++ + + Sbjct: 1 MSLLKLDIYGVRNI-QKESIVPSPAINLIIGENASGKSTLIEAI-FILG--RAKSFRSSA 56 Query: 87 IK 88 IK Sbjct: 57 IK 58 >gi|295114052|emb|CBL32689.1| hypothetical protein [Enterococcus sp. 7L76] Length = 610 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 + + + I E ++F + L I++G + GK+S+ AI++L+ Sbjct: 4 YYIERVTIKG--KDREDATVKFTNGLNIISGPSNTGKTSIVTAIDFLYG 50 >gi|294643730|ref|ZP_06721529.1| hypothetical protein CW1_2966 [Bacteroides ovatus SD CC 2a] gi|294810099|ref|ZP_06768770.1| hypothetical protein CW3_1592 [Bacteroides xylanisolvens SD CC 1b] gi|292640914|gb|EFF59133.1| hypothetical protein CW1_2966 [Bacteroides ovatus SD CC 2a] gi|294442703|gb|EFG11499.1| hypothetical protein CW3_1592 [Bacteroides xylanisolvens SD CC 1b] Length = 312 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + I I + + E ++ ++ G NG GKS+LSE + Sbjct: 2 INKISIKGPASYKNMAVFETDKNINLIYGLNGSGKSTLSEFLR 44 >gi|289670127|ref|ZP_06491202.1| recombination protein N [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|289663023|ref|ZP_06484604.1| recombination protein N [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 362 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|260753853|ref|YP_003226746.1| recombination protein F [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553216|gb|ACV76162.1| DNA replication and repair protein RecF [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 376 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +++ L I+ G+NG GK+++ EAI L G R G Sbjct: 1 MFISGLSLHDFRSH-QQIRLQAEAGLVILTGENGVGKTNILEAISLLSPG---RGFRGSP 56 Query: 87 IKKR 90 + Sbjct: 57 LPDL 60 >gi|256545214|ref|ZP_05472579.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] gi|256399041|gb|EEU12653.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] Length = 636 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + ++ + F F + + I+ + ++ G N GKS++S+ IE +FYG+ G++ Sbjct: 4 VFIKELNLISFGKF-QNKSIKLNPNFNLIYGDNESGKSTISDFIEGVFYGFDD----GNN 58 Query: 87 IKKRSIKTPM 96 + S K Sbjct: 59 KRHFSYKKEK 68 >gi|239627497|ref|ZP_04670528.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517643|gb|EEQ57509.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 552 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 LL++ + + E +EF + L I+ G+ G GKS + ++ G R Sbjct: 2 LLELHVKNL-ALIEKADVEFGEGLNILTGETGAGKSIIIGSVTMALGGKASR 52 >gi|188992197|ref|YP_001904207.1| Recombination protein N [Xanthomonas campestris pv. campestris str. B100] gi|167733957|emb|CAP52163.1| Recombination protein N [Xanthomonas campestris pv. campestris] Length = 583 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 31 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 89 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 90 RAELSAEFQLP 100 >gi|166711483|ref|ZP_02242690.1| recombination protein N [Xanthomonas oryzae pv. oryzicola BLS256] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|78776889|ref|YP_393204.1| hypothetical protein Suden_0690 [Sulfurimonas denitrificans DSM 1251] gi|78777784|ref|YP_394099.1| hypothetical protein Suden_1587 [Sulfurimonas denitrificans DSM 1251] gi|78497429|gb|ABB43969.1| hypothetical protein Suden_0690 [Sulfurimonas denitrificans DSM 1251] gi|78498324|gb|ABB44864.1| hypothetical protein Suden_1587 [Sulfurimonas denitrificans DSM 1251] Length = 550 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 ++ E+ +F+ ++ ++F ++ G+NG GKSS+ EA+ FY Q+R D Sbjct: 1 MRVQKAELKYFKFHKDLT-VDFNAKSLLIYGENGTGKSSIYEALYSNFY--HQKRLDKD 56 >gi|23428630|gb|AAM12398.1| recombinase F [Zymomonas mobilis subsp. mobilis CP4] Length = 376 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +++ L I+ G+NG GK+++ EAI L G R G Sbjct: 1 MFISGLSLHDFRSH-QQIRLQAEAGLVILTGENGVGKTNILEAISLLSPG---RGFRGSP 56 Query: 87 IKKR 90 + Sbjct: 57 LPDL 60 >gi|66769073|ref|YP_243835.1| recombination protein N [Xanthomonas campestris pv. campestris str. 8004] gi|66574405|gb|AAY49815.1| recombination protein N [Xanthomonas campestris pv. campestris str. 8004] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|56552480|ref|YP_163319.1| recombination protein F [Zymomonas mobilis subsp. mobilis ZM4] gi|241762427|ref|ZP_04760505.1| DNA replication and repair protein RecF [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56544054|gb|AAV90208.1| DNA replication and repair protein RecF [Zymomonas mobilis subsp. mobilis ZM4] gi|241373021|gb|EER62679.1| DNA replication and repair protein RecF [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 376 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + + + FR + +++ L I+ G+NG GK+++ EAI L G R G Sbjct: 1 MFISGLSLHDFRSH-QQIRLQAEAGLVILTGENGVGKTNILEAISLLSPG---RGFRGSP 56 Query: 87 IKKR 90 + Sbjct: 57 LPDL 60 >gi|21230926|ref|NP_636843.1| recombination protein N [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21112540|gb|AAM40767.1| recombination protein N [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 554 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDS 86 L + I F ++EF +T+V+G+ G GKS + +A+ +L + +HG Sbjct: 2 LRHLSIKDF-AVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 60 Query: 87 IKKRSIKTPMP 97 + S + +P Sbjct: 61 RAELSAEFQLP 71 >gi|77360038|ref|YP_339613.1| hypothetical protein PSHAa1095 [Pseudoalteromonas haloplanktis TAC125] gi|76874949|emb|CAI86170.1| putative orphan protein [Pseudoalteromonas haloplanktis TAC125] Length = 693 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 KL I +FR E +++F T+ G N GK+S + +I F + H S Sbjct: 1 MKLAKAFIRNFRRL-EEVEVDFEKSETVFVGPNNSGKTS-ATSIFRCFLSSRDFKIHDFS 58 Query: 87 IKKRS 91 I++ S Sbjct: 59 IQRIS 63 >gi|331087239|ref|ZP_08336309.1| hypothetical protein HMPREF0987_02612 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408925|gb|EGG88386.1| hypothetical protein HMPREF0987_02612 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 527 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + F F+E KIE + I G+N +GKS+L I + +G T+ R Sbjct: 3 IRELYLKSFGKFSE-TKIELEEGFHIFYGENEFGKSTLHAFIRSMLFGLTKGRGR 56 >gi|324997393|ref|ZP_08118505.1| ATPase AAA [Pseudonocardia sp. P1] Length = 249 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%) Query: 38 RGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMP 97 R E + +T + G+NG GKS+L EA+ + R ++ + Sbjct: 33 RWLREHGALPLYPGVTFLVGENGSGKSTLVEALAVAIGLNPEGGSRSFRFATRGSESDLG 92 Query: 98 MCMAVPR 104 + V R Sbjct: 93 AHLRVAR 99 >gi|319778399|ref|YP_004129312.1| DNA repair protein RecN [Taylorella equigenitalis MCE9] gi|317108423|gb|ADU91169.1| DNA repair protein RecN [Taylorella equigenitalis MCE9] Length = 559 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L+ + I F + I F + T+ G+ G GKS L +A+ Sbjct: 2 LISLHIRDF-VIVDRADINFKNGFTVFTGETGAGKSILIDALLLTLGQRASASV 54 >gi|291059423|gb|ADD72158.1| DNA replication and repair protein RecF [Treponema pallidum subsp. pallidum str. Chicago] Length = 357 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 L + +FR I+ + G NG GK+++ E + YG + R Sbjct: 1 MPFLTVTAINFRNLA-HHTIDISSPEVFFVGNNGQGKTNILEVLYLAAYGNSFR 53 >gi|284923721|emb|CBG36818.1| putative prophage ATP/GTP binding protein [Escherichia coli 042] Length = 478 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGY--TQRRK 82 + +L I G+ +I I F TI+ +NG GK++L A++ G R+ Sbjct: 1 MCIELKKFSIKKLYGYKDIHLI-FNKKSTIIIAENGAGKTTLINALKSTLKGEFDELRKI 59 Query: 83 HGDSIKKRSIKTPMPMCMA 101 +SI + +A Sbjct: 60 KCESIDIEFSDQKFTLNIA 78 >gi|224106203|ref|XP_002314084.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222850492|gb|EEE88039.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 707 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 6/37 (16%) Query: 34 ISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + RG+ E +I T + G +G GKS+L +++ Sbjct: 63 LQGLRGYAEPGRI------TAIMGPSGSGKSTLLDSL 93 >gi|330880235|gb|EGH14384.1| hypothetical protein PSYMP_27553 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 888 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF----YGYTQRRKHG 84 + I G + Q + F+ L + G G GKSSL EA+ + Q K+ Sbjct: 283 IRSIHFDG--GILDGQTLHFSSELNALIGIRGSGKSSLLEAVRYALDIPRGEKVQDTKYK 340 Query: 85 DSIKK 89 D + + Sbjct: 341 DELIR 345 >gi|288940004|ref|YP_003442244.1| SMC domain-containing protein [Allochromatium vinosum DSM 180] gi|288895376|gb|ADC61212.1| SMC domain protein [Allochromatium vinosum DSM 180] Length = 403 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWL 73 +L I + +F+ + + + T + G NG GKS++ +AI+++ Sbjct: 9 IRLRSIYVDNFKSLVD---FQLSLAAFTCLIGLNGSGKSTVLQAIDFI 53 >gi|294891373|ref|XP_002773547.1| structural maintenance of chromosome, putative [Perkinsus marinus ATCC 50983] gi|239878719|gb|EER05363.1| structural maintenance of chromosome, putative [Perkinsus marinus ATCC 50983] Length = 1191 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKT 94 + G NG GKS++ ++I ++ ++ ++ + K Sbjct: 7 FNAITGLNGTGKSNILDSICFVMGITNLKQVRATNLSELVYKQ 49 >gi|227543071|ref|ZP_03973120.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181293|gb|EEI62265.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 238 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +EF+ +T+ G NG GKS+L EA+ Sbjct: 35 LEFSHPVTVFVGDNGAGKSTLLEALAVAMR 64 >gi|227488460|ref|ZP_03918776.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091674|gb|EEI26986.1| ABC superfamily ATP binding cassette transporter, ABC protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 238 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 46 IEFADHLTIVNGQNGYGKSSLSEAIEWLFY 75 +EF+ +T+ G NG GKS+L EA+ Sbjct: 35 LEFSHPVTVFVGDNGAGKSTLLEALAVAMR 64 >gi|218129656|ref|ZP_03458460.1| hypothetical protein BACEGG_01235 [Bacteroides eggerthii DSM 20697] gi|317477510|ref|ZP_07936735.1| DNA replication and repair protein RecF [Bacteroides eggerthii 1_2_48FAA] gi|217988386|gb|EEC54709.1| hypothetical protein BACEGG_01235 [Bacteroides eggerthii DSM 20697] gi|316906311|gb|EFV28040.1| DNA replication and repair protein RecF [Bacteroides eggerthii 1_2_48FAA] Length = 378 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 L I I +++ E ++ F+ L GQNG GK++L +A+ +L + + Sbjct: 3 LKHISILNYKNL-EQVELAFSPKLNTFFGQNGMGKTNLLDAVYFLSFCKSA 52 >gi|254439561|ref|ZP_05053055.1| hypothetical protein OA307_4431 [Octadecabacter antarcticus 307] gi|198255007|gb|EDY79321.1| hypothetical protein OA307_4431 [Octadecabacter antarcticus 307] Length = 616 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 K+ I + +FR E++ ++ D LT++ G N GKS++ A+ F T Sbjct: 3 KIRRIVVKNFRSILELE-MDAKD-LTVIVGDNDCGKSNVLRALNLFFNDQT 51 >gi|195435017|ref|XP_002065498.1| GK15482 [Drosophila willistoni] gi|194161583|gb|EDW76484.1| GK15482 [Drosophila willistoni] Length = 1029 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHG 84 +I ++ + F + EI +L ++ G NG GKS++ AI F G Q Sbjct: 8 MIGRIKTVYCKDFVSYNEIAYCP-KKYLNVLTGPNGTGKSTIVSAIILGFGGEPQLLNRS 66 Query: 85 DSIKK 89 SI Sbjct: 67 SSISD 71 >gi|119963147|ref|YP_949198.1| hypothetical protein AAur_3505 [Arthrobacter aurescens TC1] gi|119950006|gb|ABM08917.1| hypothetical protein AAur_3505 [Arthrobacter aurescens TC1] Length = 478 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 + + + ++R F++I I F LTI+ G NG GK++L + Sbjct: 91 VSQLTVHNWRQFSDID-IVFHPRLTILTGANGAGKTTLLNIL 131 >gi|293365948|ref|ZP_06612651.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291315626|gb|EFE56076.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 363 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ I +++ F + IE + LT++ G+N GKSS +++ L Y + + K Sbjct: 1 MPIRNVRIKNYKCFQDE-SIELSK-LTVLTGRNSAGKSSFIQSL--LLYELSGKNKR 53 >gi|270294132|ref|ZP_06200334.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275599|gb|EFA21459.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 1140 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 KL + I + + I+F + L ++ G+ G GK+++ +AI Y T R Sbjct: 1 MKLQKLTIKNLASIEDAV-IDFENGPLSEESLFLICGETGAGKTTILDAICLALYNETPR 59 Query: 81 RKHGDSIKKRSIKT 94 H ++ K + + Sbjct: 60 MDHAENEKYKDLSQ 73 >gi|253999796|ref|YP_003051859.1| hypothetical protein Msip34_2090 [Methylovorus sp. SIP3-4] gi|253986475|gb|ACT51332.1| conserved hypothetical protein [Methylovorus sp. SIP3-4] Length = 487 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 1 MTRLRKKNTCACLSKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNG 60 ++ +R+ L K YA+ LL I RGF++ I F +T + G NG Sbjct: 2 VSEIRESTIKTLLDKVRRHDYAK----YLLKASIGRIRGFSQED-ITFEFPVTALIGPNG 56 Query: 61 YGKSSLS 67 GKSS+ Sbjct: 57 SGKSSVL 63 >gi|209809244|ref|YP_002264782.1| hypothetical protein VSAL_II0449 [Aliivibrio salmonicida LFI1238] gi|208010806|emb|CAQ81203.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 554 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 +T+ + + L IE+S FRG + + F + LT + G+N +GKSSL +A+ Sbjct: 1 MTTLFNEEGYMLLERIEVSGFRGI-KRLSLSF-EQLTTLIGENTWGKSSLLDALSIAL 56 >gi|196014313|ref|XP_002117016.1| hypothetical protein TRIADDRAFT_61012 [Trichoplax adhaerens] gi|190580507|gb|EDV20590.1| hypothetical protein TRIADDRAFT_61012 [Trichoplax adhaerens] Length = 385 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 K+L I++ +F + K+ ++ I+ G+NG GKS++ I G S+ Sbjct: 116 KILQIQLINFMCHS-NLKMTLGGNVNIIIGRNGSGKSAIMTGIIICLSGRPSITNRASSL 174 Query: 88 KK 89 K+ Sbjct: 175 KE 176 >gi|163840804|ref|YP_001625209.1| putative Iron(III) transport ATP-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162954280|gb|ABY23795.1| putative Iron(III) transport ATP-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 274 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQR-RKHGDSIKKRSIKTPMPMCMAVPR 104 +T V G NG GKS+L A + + R GD I + S K +P+ Sbjct: 30 ITAVVGPNGSGKSTLLRAAYRAIKPASGQVRMAGDDIWRLSAKEAARRRAVLPQ 83 >gi|161508125|ref|YP_001578093.1| hypothetical protein lhv_1963 [Lactobacillus helveticus DPC 4571] gi|260102008|ref|ZP_05752245.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus helveticus DSM 20075] gi|160349114|gb|ABX27788.1| hypothetical protein lhv_1963 [Lactobacillus helveticus DPC 4571] gi|260084188|gb|EEW68308.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus helveticus DSM 20075] gi|328464189|gb|EGF35646.1| ABC-type cobalt transport system, ATPase component [Lactobacillus helveticus MTCC 5463] Length = 266 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Query: 29 LLDIEISHF------RGFTEIQKIE-FADHLTIVNGQNGYGKSSLSEAIEWLFYGYT 78 + IE++H R F+ + + FAD + + GQNG GKS+L + + L T Sbjct: 1 MSTIELNHLTFTYPERSFSLDVEYKHFADPMVAIVGQNGAGKSTLFKLLTGLLTPQT 57 >gi|331240670|ref|XP_003332985.1| hypothetical protein PGTG_14771 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311975|gb|EFP88566.1| hypothetical protein PGTG_14771 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1207 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 38 RGFTEIQKIEFADH--LTIVNGQNGYGKSSLSEAIEWLFY 75 R F +EF+ L ++ G NG GKS+L AI Sbjct: 139 RNFVTYSSVEFSPGPYLNMIIGPNGTGKSTLVCAIVLGLG 178 >gi|303239857|ref|ZP_07326380.1| DNA repair protein RecN [Acetivibrio cellulolyticus CD2] gi|302592567|gb|EFL62292.1| DNA repair protein RecN [Acetivibrio cellulolyticus CD2] Length = 575 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L ++I + + +IE D L ++ G+ G GKS + ++I + + Sbjct: 2 LQQLQIQNI-AIIDKVEIELGDGLNVLTGETGAGKSIIIDSINAILGERLSKDL 54 >gi|226311933|ref|YP_002771827.1| DNA repair protein [Brevibacillus brevis NBRC 100599] gi|226094881|dbj|BAH43323.1| DNA repair protein [Brevibacillus brevis NBRC 100599] Length = 574 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L+++ I +F + I F L I+ G+ G GKS + +A+ L G R D ++ Sbjct: 2 LVELSIRNF-AIIKSVTISFQKGLNILTGETGAGKSIIIDALGLLLGG----RASADFVR 56 Query: 89 KRSIKTPMPMCMAVP 103 + + +P Sbjct: 57 YGEPRAEVEGLFELP 71 >gi|225571188|ref|ZP_03780186.1| hypothetical protein CLOHYLEM_07276 [Clostridium hylemonae DSM 15053] gi|225160019|gb|EEG72638.1| hypothetical protein CLOHYLEM_07276 [Clostridium hylemonae DSM 15053] Length = 515 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 ++ ++ + +F + + +D + ++ G+N GKS+L I+ + +G + R + Sbjct: 1 MRIKELMVKNFGKIKDKN-VTLSDGVNLLYGENESGKSTLHTFIKCMLFGLERGRGRASA 59 >gi|61806019|ref|YP_214379.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM2] gi|61374528|gb|AAX44525.1| recombination endonuclease subunit [Prochlorococcus phage P-SSM2] gi|265525229|gb|ACY76026.1| predicted protein [Prochlorococcus phage P-SSM2] Length = 570 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 26 IFKLLDIEISHFRGFTEI-QKIEFADHLT-IVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + I +F +++F + T ++ G NG GKS++ +A+ + + R+ + Sbjct: 1 MIIFQKIRWKNFLSTGNQFTEVDFQQNATNLIIGTNGTGKSTVLDALTFSLFNKPFRKIN 60 Query: 84 GDSIKKRSIK 93 + + + Sbjct: 61 KGQLANSTNE 70 >gi|218439809|ref|YP_002378138.1| urea ABC transporter ATP-binding protein [Cyanothece sp. PCC 7424] gi|218172537|gb|ACK71270.1| urea ABC transporter, ATP-binding protein UrtD [Cyanothece sp. PCC 7424] Length = 248 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFA---DHLTIVNGQNGYGKSSLSEAIE 71 I ++ ++ + +F GF + + F+ L ++ G NG GK++ + I Sbjct: 5 ILEIKNLTV-NFDGFKALNSLNFSMETGELRVIIGPNGAGKTTFLDVIT 52 >gi|110597050|ref|ZP_01385339.1| DNA repair protein RecN [Chlorobium ferrooxidans DSM 13031] gi|110341241|gb|EAT59706.1| DNA repair protein RecN [Chlorobium ferrooxidans DSM 13031] Length = 571 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 L + I +F + +EF LTI+ G+ G GKS L A+ + Sbjct: 2 LFSLYIRNF-ALIQELTVEFRPGLTIITGETGAGKSILMGALNIVLGERASSDL 54 >gi|37524600|ref|NP_927944.1| hypothetical protein plu0598 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784024|emb|CAE12893.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 522 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + + + +F+ F ++ +EF L I+ G N GKSS+ +AI+ + Sbjct: 4 IRRLVLKNFKRFKNLE-LEFDPELNILVGGNEAGKSSVLQAIDIALNASRSK 54 >gi|116626715|ref|YP_828871.1| ABC transporter-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116229877|gb|ABJ88586.1| ABC transporter related [Candidatus Solibacter usitatus Ellin6076] Length = 314 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Query: 43 IQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPMPMCMAV 102 + +T + G NG GK++L L G + + S+ + + P +C AV Sbjct: 23 KVSLSIPPGITSLVGPNGSGKTTLMN----LMTGLIRPTQGEISVLGIAPEDPERLCRAV 78 Query: 103 PRC 105 C Sbjct: 79 GYC 81 >gi|328885787|emb|CCA59026.1| hypothetical protein SVEN_5740 [Streptomyces venezuelae ATCC 10712] Length = 438 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + ++ ++ F+ F + + A LT++ G+N GKS+ + +E Sbjct: 6 IEEVRLTAFKSFRDE-RFPLAP-LTVLIGRNSSGKSNAFDGLE 46 >gi|308177648|ref|YP_003917054.1| drug resistance ATP-binding protein [Arthrobacter arilaitensis Re117] gi|307745111|emb|CBT76083.1| putative drug resistance ATP-binding protein [Arthrobacter arilaitensis Re117] Length = 560 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Query: 38 RGFTEIQKIE---FA---DHLTIVNGQNGYGKSSLSEAIEWL--FYGYTQRRKHGDSIKK 89 +GF + I+ F+ + + V G NG GKS+L + I L G T + GD++K Sbjct: 331 KGFGDRVLIDGLSFSLPRNGIVGVIGPNGVGKSTLFKTIVGLEELDGGTLK--IGDTVKI 388 Query: 90 RSIKTPMP 97 + Sbjct: 389 SYVDQNRE 396 >gi|295113141|emb|CBL31778.1| Predicted ATPase [Enterococcus sp. 7L76] Length = 238 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLEFKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|229523607|ref|ZP_04413012.1| pathogenesis-related protein [Vibrio cholerae bv. albensis VL426] gi|229337188|gb|EEO02205.1| pathogenesis-related protein [Vibrio cholerae bv. albensis VL426] Length = 226 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 K+ ++I +FR + ++EFA+ T++ G N GK+S ++A+ Sbjct: 1 MKISFVDIQNFRKL-KCCRVEFAEEQTLLVGANNSGKTSATDAL 43 >gi|197303859|ref|ZP_03168894.1| hypothetical protein RUMLAC_02597 [Ruminococcus lactaris ATCC 29176] gi|197297042|gb|EDY31607.1| hypothetical protein RUMLAC_02597 [Ruminococcus lactaris ATCC 29176] Length = 283 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Query: 32 IEISHFRGFTEIQKIEF-----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + I +FR + +++ +T + G NG GKS+L +AI L G + R Sbjct: 2 LSIENFRKRYDDFELDCTMSVEPGQITGIVGANGAGKSTLFKAILGLVKGDSGR 55 >gi|167838438|ref|ZP_02465297.1| branched-chain amino acid ABC transporter, ATP-binding protein [Burkholderia thailandensis MSMB43] Length = 252 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 52 LTIVNGQNGYGKSSLSEAIEWLFYGYTQR----RKHGDSIKKRSIKTPMPMCMAVPRCKY 107 + V G NG GKS+L A+ R GD + I+ + + M + K Sbjct: 37 IVTVIGPNGAGKSTLLNAVMGALPTNGHAAGTVRYRGDDVGALPIEQRVALGMCLVPEKR 96 Query: 108 QL 109 +L Sbjct: 97 EL 98 >gi|149181867|ref|ZP_01860356.1| DNA repair protein (recombination protein N) [Bacillus sp. SG-1] gi|148850406|gb|EDL64567.1| DNA repair protein (recombination protein N) [Bacillus sp. SG-1] Length = 567 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 L ++ I +F + + + LT++ G+ G GKS + +A+ L G Sbjct: 2 LQELSIKNF-AIIDELTVSIEEGLTVLTGETGAGKSIIIDAVHLLVGG 48 >gi|110803018|ref|YP_698106.1| iron(III) dicitrate transport permease-like protein yusV [Clostridium perfringens SM101] gi|110683519|gb|ABG86889.1| putative iron(III) dicitrate transport permease [Clostridium perfringens SM101] Length = 258 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDS 86 + IE +T + G NG GKS+L ++I + + GD Sbjct: 20 DDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDK 65 >gi|29376315|ref|NP_815469.1| ABC transporter, ATP-binding protein [Enterococcus faecalis V583] gi|227518956|ref|ZP_03949005.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis TX0104] gi|227553578|ref|ZP_03983627.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis HH22] gi|256961731|ref|ZP_05565902.1| SMC domain-containing protein [Enterococcus faecalis Merz96] gi|257090083|ref|ZP_05584444.1| SMC domain-containing protein [Enterococcus faecalis CH188] gi|293383436|ref|ZP_06629349.1| ABC transporter, ATP-binding protein [Enterococcus faecalis R712] gi|293388911|ref|ZP_06633396.1| ABC transporter, ATP-binding protein [Enterococcus faecalis S613] gi|312903519|ref|ZP_07762699.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0635] gi|312907736|ref|ZP_07766727.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 512] gi|312910354|ref|ZP_07769201.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 516] gi|29343778|gb|AAO81539.1| ABC transporter, ATP-binding protein [Enterococcus faecalis V583] gi|227073645|gb|EEI11608.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis TX0104] gi|227177271|gb|EEI58243.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus faecalis HH22] gi|256952227|gb|EEU68859.1| SMC domain-containing protein [Enterococcus faecalis Merz96] gi|256998895|gb|EEU85415.1| SMC domain-containing protein [Enterococcus faecalis CH188] gi|291079227|gb|EFE16591.1| ABC transporter, ATP-binding protein [Enterococcus faecalis R712] gi|291081692|gb|EFE18655.1| ABC transporter, ATP-binding protein [Enterococcus faecalis S613] gi|310626764|gb|EFQ10047.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 512] gi|310633395|gb|EFQ16678.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0635] gi|311289627|gb|EFQ68183.1| ABC transporter, ATP-binding protein [Enterococcus faecalis DAPTO 516] gi|315162414|gb|EFU06431.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0645] gi|315576021|gb|EFU88212.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0309B] gi|315577785|gb|EFU89976.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0630] gi|315580596|gb|EFU92787.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0309A] Length = 238 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Query: 27 FKLLDIEISHFR---------GFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 L +E F G + + F +T +G+NG GKS+L EAI Sbjct: 4 IFLKRLEFKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAI 56 >gi|325663719|ref|ZP_08152123.1| hypothetical protein HMPREF0490_02864 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470212|gb|EGC73445.1| hypothetical protein HMPREF0490_02864 [Lachnospiraceae bacterium 4_1_37FAA] Length = 527 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKH 83 + ++ + F F+E KIE + I G+N +GKS+L I + +G T+ R Sbjct: 3 IRELYLKSFGKFSE-TKIELEEGFHIFYGENEFGKSTLHAFIRSMLFGLTKGRGR 56 >gi|313200887|ref|YP_004039545.1| ATP-dependent endonuclease [Methylovorus sp. MP688] gi|312440203|gb|ADQ84309.1| ATP-dependent endonuclease [Methylovorus sp. MP688] Length = 770 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI-EWLFYGYTQRRKHG 84 L + +FR + IE AD ++I G N GK+S ++AI ++ G + + Sbjct: 1 MHLHSYRLRNFRRLKD-AHIELADDISIFVGSNNSGKTSATQAIHAFVTGGRDRFSLYD 58 >gi|312961231|ref|ZP_07775736.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas fluorescens WH6] gi|311284889|gb|EFQ63465.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas fluorescens WH6] Length = 258 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 25 LIFKLLDIEISHFRGFTEIQKIEF---ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRR 81 ++ +L DI +S F+G I I F A + + G NG GKSSL I +++ + Sbjct: 8 VLLRLDDISLS-FKGIKAITSISFDVRAGDICGLIGPNGAGKSSLLNVINGVYHPQSGSI 66 Query: 82 KHGDSIKKR 90 ++ ++R Sbjct: 67 RYAGQTRRR 75 >gi|268610500|ref|ZP_06144227.1| recombination protein F [Ruminococcus flavefaciens FD-1] Length = 382 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 33 EISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKK 89 EI F+ I+ G N GK++L EA+ W+ G + G K Sbjct: 7 EIDGFKNLKG-VSFAPDPKYNIIVGANAQGKTNLLEAM-WILSGC--KSFRGSKEKD 59 >gi|228471347|ref|ZP_04056148.1| RecF protein [Porphyromonas uenonis 60-3] gi|228306848|gb|EEK15961.1| RecF protein [Porphyromonas uenonis 60-3] Length = 372 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 16/93 (17%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF-------------- 74 L + + +F+ FA L G NG GK++L +AI +L Sbjct: 3 LSSLSVINFKNVA-TANCHFAPKLNCFFGGNGMGKTNLLDAIHYLSVVRGHLGTTDRYAI 61 Query: 75 -YGYTQRRKHGDSIKKRSIKTPMPMCMAVPRCK 106 +G + G+ + + + + ++ R K Sbjct: 62 RHGAQEAIIQGEYLWDDGQEDKISLRISAERSK 94 >gi|56751722|ref|YP_172423.1| hypothetical protein syc1713_c [Synechococcus elongatus PCC 6301] gi|56686681|dbj|BAD79903.1| unknown protein [Synechococcus elongatus PCC 6301] Length = 486 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I FRG + +E +T ++G NG GKS++ + + Y + + K Sbjct: 25 LRKVHIEGFRG-VQSADLELEFPITAISGLNGSGKSTVGQ-LAICAYKKPDKSM---TYK 79 Query: 89 KRSIKTPMPMCMAVPR 104 + IK P+ A P+ Sbjct: 80 RLYIKDFFPVSPADPK 95 >gi|23098162|ref|NP_691628.1| ferrichrome ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] gi|22776387|dbj|BAC12663.1| ferrichrome ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] Length = 277 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 24/83 (28%) Query: 17 LTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYG 76 +T+ Y++K I L +EI +T + G NG GKS+L + I G Sbjct: 11 VTTGYSKKTIISDLSLEIE-------------EGKITTIIGPNGCGKSTLLKTI-----G 52 Query: 77 YTQRRKHGD------SIKKRSIK 93 ++K GD ++K S K Sbjct: 53 RVLKQKFGDILLYDQNMKSLSTK 75 >gi|333030065|ref|ZP_08458126.1| DNA replication and repair protein recF [Bacteroides coprosuis DSM 18011] gi|332740662|gb|EGJ71144.1| DNA replication and repair protein recF [Bacteroides coprosuis DSM 18011] Length = 372 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 + I + +++ E ++EF+ L G+NG GK+++ + I +L Sbjct: 1 MVITHISVLNYKNL-EEVELEFSPKLNCFLGENGMGKTNILDTIYYL 46 >gi|303236081|ref|ZP_07322684.1| DNA repair protein RecN [Prevotella disiens FB035-09AN] gi|302483954|gb|EFL46946.1| DNA repair protein RecN [Prevotella disiens FB035-09AN] Length = 553 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + I +F + I+F + ++++G+ G GKS + AI L ++ K Sbjct: 2 LKHLYIKNF-TLIDELDIDFFNGFSVISGETGAGKSIILGAISLLLGNRADSKQIKQGEK 60 Query: 89 KRSIK 93 K I+ Sbjct: 61 KCIIE 65 >gi|291519727|emb|CBK74948.1| hypothetical protein CIY_22800 [Butyrivibrio fibrisolvens 16/4] Length = 160 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQ 79 D T+ G NG GKS++ +A+ +L G TQ Sbjct: 27 DGSTLFTGVNGSGKSTVLDAMTYLLTGNTQ 56 >gi|269103070|ref|ZP_06155767.1| zinc ABC transporter ATP-binding protein ZnuC [Photobacterium damselae subsp. damselae CIP 102761] gi|268162968|gb|EEZ41464.1| zinc ABC transporter ATP-binding protein ZnuC [Photobacterium damselae subsp. damselae CIP 102761] Length = 249 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 38 RGFTEIQKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIKKRSIKTPM 96 R + ++ +T + G NG GKS+L + I L + + IK + + Sbjct: 17 RNVLDNISLKIERGQITTLIGPNGAGKSTLVKIITGLRKPTSGKVIRKKGIKIGYVPQKL 76 Query: 97 PMCMAVP 103 + ++P Sbjct: 77 RLNDSLP 83 >gi|312109332|ref|YP_003987648.1| ABC transporter [Geobacillus sp. Y4.1MC1] gi|311214433|gb|ADP73037.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1] Length = 263 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 13/65 (20%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWL 73 +K L Y +LI K L+I+I + +T + G NG GKS+L + + + Sbjct: 6 TKDLNIGYHEQLIVKNLNIQIPDQK-------------ITAIIGPNGCGKSTLLKTLTRI 52 Query: 74 FYGYT 78 + Sbjct: 53 ITPQS 57 >gi|33864535|ref|NP_896095.1| ABC transporter:DNA repair protein RecN [Prochlorococcus marinus str. MIT 9313] gi|33641315|emb|CAE22445.1| ABC transporter:DNA repair protein RecN [Prochlorococcus marinus str. MIT 9313] Length = 560 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 L + + + E ++EF+ T++ G+ G GKS L +A++ + G + G + Sbjct: 2 LTGLLLQNI-ALIESLELEFSSGFTVLTGETGAGKSILLDALDAVLGG--AQGASGVRLL 58 Query: 89 KRSIKTPM 96 + Sbjct: 59 RAGSDRAR 66 >gi|332668313|ref|YP_004451101.1| hypothetical protein Halhy_6409 [Haliscomenobacter hydrossis DSM 1100] gi|332337127|gb|AEE54228.1| hypothetical protein Halhy_6409 [Haliscomenobacter hydrossis DSM 1100] Length = 593 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++ + I +F+ F + ++EF + L + G N GKS+L +A+ Sbjct: 1 MRIRKLRIENFKKF-QKLEVEFQE-LDCLIGGNNSGKSTLLQAL 42 >gi|291277420|ref|YP_003517192.1| hypothetical protein HMU12130 [Helicobacter mustelae 12198] gi|290964614|emb|CBG40467.1| putative hypothetical protein [Helicobacter mustelae 12198] Length = 663 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 27 FKLLDIEISHFRGFTEIQKIEF----ADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 + I I + + +EF + +L + G NG+GK+S + LF G Sbjct: 1 MFIQKISICNLFAYYGKVDVEFRQNDSKNLYCIYGDNGFGKTSFIRCAKLLFLGLDSAIV 60 Query: 83 HGDSIKKRSIKT 94 K K Sbjct: 61 QRFYKKDIGQKQ 72 >gi|238619089|ref|YP_002913914.1| hypothetical protein M164_0627 [Sulfolobus islandicus M.16.4] gi|238380158|gb|ACR41246.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4] Length = 299 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIE 71 + ++ + FRG +++ + IV G+NG GK+S E+I Sbjct: 1 MNISEVNVEGFRGLKIATRLK---RINIVVGENGSGKTSFLESIF 42 >gi|226360136|ref|YP_002777914.1| ABC transporter ATP-binding protein [Rhodococcus opacus B4] gi|226238621|dbj|BAH48969.1| putative ABC transporter ATP-binding protein [Rhodococcus opacus B4] Length = 339 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 42 EIQKIEFADH-LTIVNGQNGYGKSSLS---------EAIEWLFYGYTQRRKHGDSIKKRS 91 ++ +E +T + G NG GK++L ++ W G + R + + +R Sbjct: 57 DVAHLEIQRGCITGLIGPNGAGKTTLFNLLTGFDRPDSGTWSMDGQSLGRMYPHQVARRG 116 Query: 92 IKTPMPMCMAVPR 104 + + A+ + Sbjct: 117 VVRTFQLTKALSK 129 >gi|154296273|ref|XP_001548568.1| hypothetical protein BC1G_12963 [Botryotinia fuckeliana B05.10] gi|150843421|gb|EDN18614.1| hypothetical protein BC1G_12963 [Botryotinia fuckeliana B05.10] Length = 1094 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSI 87 ++ +++++F + + +L +V G NG GKSS+ A+ + D + Sbjct: 81 IVRVKLNNFVTYESAEFFP-GSNLNMVIGPNGTGKSSVVCALCLGLGSSPKNLGRADKV 138 >gi|16331327|ref|NP_442055.1| high-affinity branched-chain amino acid transport ATP-binding protein [Synechocystis sp. PCC 6803] gi|1001500|dbj|BAA10125.1| high-affinity branched-chain amino acid transport ATP-binding protein [Synechocystis sp. PCC 6803] Length = 373 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Query: 26 IFKLLDIEISHFRGFTEIQKIEFADH---LTIVNGQNGYGKSSLSEAIE 71 I ++ D+ +S F GF + + F+ + L ++ G NG GK++ + I Sbjct: 5 ILEIQDLTVS-FDGFRALNHLTFSMNPGELRVIIGPNGAGKTTFLDVIT 52 >gi|89094022|ref|ZP_01166966.1| hypothetical protein MED92_01956 [Oceanospirillum sp. MED92] gi|89081696|gb|EAR60924.1| hypothetical protein MED92_01956 [Oceanospirillum sp. MED92] Length = 1150 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 17/33 (51%) Query: 50 DHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRK 82 V G NG GKSSL +AI+ + G +R Sbjct: 23 KGNVAVVGPNGSGKSSLLDAIQTVLMGGNKRHL 55 >gi|328851224|gb|EGG00381.1| hypothetical protein MELLADRAFT_93316 [Melampsora larici-populina 98AG31] Length = 1107 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 29 LLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGDSIK 88 + +E+ F + I F + G+NG GKS++ I G S+K Sbjct: 77 IEQLEVFKFMCH-DYLVINFGPQANFIIGRNGSGKSAILTGIILALGGKASTTSRATSLK 135 >gi|212211672|ref|YP_002302608.1| DNA replication and repair protein [Coxiella burnetii CbuG_Q212] gi|226737783|sp|B6J289|RECF_COXB2 RecName: Full=DNA replication and repair protein recF gi|212010082|gb|ACJ17463.1| DNA replication and repair protein [Coxiella burnetii CbuG_Q212] Length = 357 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++++ FR + I GQNG GK+S+ E+I +L G + R Sbjct: 3 YIGSLKVNQFRNLAD-VDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFR 54 >gi|169628512|ref|YP_001702161.1| hypothetical protein MAB_1421 [Mycobacterium abscessus ATCC 19977] gi|169240479|emb|CAM61507.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 874 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQRRKHGD 85 KL + ++++RG T + +V G N GK+S+ EA++ L R D Sbjct: 1 MKLHRLSVTNYRGITHRDITFPERGVVVVGGANEVGKTSMIEALD-LLIESKDRSTKKD 58 >gi|165924210|ref|ZP_02220042.1| DNA replication and repair protein RecF [Coxiella burnetii RSA 334] gi|165916344|gb|EDR34948.1| DNA replication and repair protein RecF [Coxiella burnetii RSA 334] Length = 357 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++++ FR + I GQNG GK+S+ E+I +L G + R Sbjct: 3 YIGSLKVNQFRNLAD-VDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFR 54 >gi|161830866|ref|YP_001595903.1| DNA replication and repair protein RecF [Coxiella burnetii RSA 331] gi|215918858|ref|NP_819059.2| DNA replication and repair protein RecF [Coxiella burnetii RSA 493] gi|218511878|sp|Q83FD6|RECF_COXBU RecName: Full=DNA replication and repair protein recF gi|226737785|sp|A9N902|RECF_COXBR RecName: Full=DNA replication and repair protein recF gi|161762733|gb|ABX78375.1| DNA replication and repair protein RecF [Coxiella burnetii RSA 331] gi|206583742|gb|AAO89573.2| DNA replication and repair protein [Coxiella burnetii RSA 493] Length = 357 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++++ FR + I GQNG GK+S+ E+I +L G + R Sbjct: 3 YIGSLKVNQFRNLAD-VDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFR 54 >gi|153209959|ref|ZP_01947546.1| DNA replication and repair protein RecF [Coxiella burnetii 'MSU Goat Q177'] gi|212217691|ref|YP_002304478.1| DNA replication and repair protein [Coxiella burnetii CbuK_Q154] gi|226737782|sp|B6J8S5|RECF_COXB1 RecName: Full=DNA replication and repair protein recF gi|120575205|gb|EAX31829.1| DNA replication and repair protein RecF [Coxiella burnetii 'MSU Goat Q177'] gi|212011953|gb|ACJ19333.1| DNA replication and repair protein [Coxiella burnetii CbuK_Q154] Length = 357 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++++ FR + I GQNG GK+S+ E+I +L G + R Sbjct: 3 YIGSLKVNQFRNLAD-VDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFR 54 >gi|154707128|ref|YP_001423442.1| DNA replication and repair protein [Coxiella burnetii Dugway 5J108-111] gi|226737784|sp|A9KEV0|RECF_COXBN RecName: Full=DNA replication and repair protein recF gi|154356414|gb|ABS77876.1| DNA replication and repair protein [Coxiella burnetii Dugway 5J108-111] Length = 357 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 28 KLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLFYGYTQR 80 + ++++ FR + I GQNG GK+S+ E+I +L G + R Sbjct: 3 YIGSLKVNQFRNLAD-VDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFR 54 >gi|90412629|ref|ZP_01220631.1| hypothetical ATP-dependent endonuclease of the OLD family protein [Photobacterium profundum 3TCK] gi|90326437|gb|EAS42849.1| hypothetical ATP-dependent endonuclease of the OLD family protein [Photobacterium profundum 3TCK] Length = 548 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAIEWLF 74 L IE+S FRG + + F + L+++ G+N +GKSSL +A+ Sbjct: 1 MHLERIEVSGFRGI-KRLSLSF-NQLSVLIGENAWGKSSLLDALSIAL 46 >gi|53711927|ref|YP_097919.1| hypothetical protein BF0636 [Bacteroides fragilis YCH46] gi|52214792|dbj|BAD47385.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 709 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 10/81 (12%) Query: 27 FKLLDIEISHFRGFTEIQKIEFADH------LTIVNGQNGYGKSSLSEAIEWLFYGYTQ- 79 F + I I +F+ E KIEF + I+ G+NG GKSS+ +AI + Sbjct: 288 FPIEYIHIKNFKSI-ENLKIEFKEDELNNKSWLILLGENGVGKSSILQAIAVGLNANAKI 346 Query: 80 --RRKHGDSIKKRSIKTPMPM 98 IKKR K + + Sbjct: 347 ITSTLIKSLIKKRKQKAEIEI 367 >gi|328881471|emb|CCA54710.1| ABC-type Fe3+-siderophore transport system,ATPase component [Streptomyces venezuelae ATCC 10712] Length = 280 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 13/57 (22%) Query: 14 SKSLTSYYARKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLSEAI 70 ++S+T Y +++I + L +EI + T++ G N GKS+L A+ Sbjct: 10 AESVTLAYEQRVIARDLSVEIP-------------DNSFTVIVGPNACGKSTLLRAL 53 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.319 0.141 0.397 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,954,852,115 Number of Sequences: 14124377 Number of extensions: 68049784 Number of successful extensions: 624993 Number of sequences better than 10.0: 10000 Number of HSP's better than 10.0 without gapping: 13615 Number of HSP's successfully gapped in prelim test: 5930 Number of HSP's that attempted gapping in prelim test: 608222 Number of HSP's gapped (non-prelim): 20521 length of query: 110 length of database: 4,842,793,630 effective HSP length: 78 effective length of query: 32 effective length of database: 3,741,092,224 effective search space: 119714951168 effective search space used: 119714951168 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 76 (33.8 bits)