HHsearch alignment for GI: 254780646 and conserved domain: pfam00829

Probab=100.00  E-value=2.4e-40  Score=245.89  Aligned_cols=96  Identities=56%  Similarity=0.839  Sum_probs=95.0

Q ss_pred             CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC
Q ss_conf             96799999888897699899982446789972130421453068851226743378679999996345673899996388
Q gi|254780646|r    1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR   80 (103)
Q Consensus         1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR   80 (103)
T Consensus         1 MyAVi~~gGkQykV~~G~~i~v~~l~~~~G~~i~~~~VLl~~~~~~~~iG~P~l~~a~V~a~V~~~~r~~Ki~vfK~krR   80 (96)
T pfam00829         1 MYAIIETGGKQYKVEEGDVIFVEKLDAEVGDKIEFDKVLLVGGDGKVKIGKPYVEGAKVKAEVLEHGRGKKVIVFKYKRR   80 (96)
T ss_pred             CEEEEEECCEEEEECCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCC
T ss_conf             98999979999998599999987647789999996486998489968839871357699999983148883999994598


Q ss_pred             CCCEEECCCCCCCEEE
Q ss_conf             8716642745760099
Q gi|254780646|r   81 QNYRRTHGHRQEMTVV   96 (103)
Q Consensus        81 K~yrr~~GhRq~~T~i   96 (103)
T Consensus        81 K~yrr~~GHRQ~~T~i   96 (96)
T pfam00829        81 KNYRKKQGHRQPYTRV   96 (96)
T ss_pred             CCCCCCCCCCCCEEEC
T ss_conf             8864677547760709