HHsearch alignment of GI: 254780646 and MMDB domain: 3i1n_R_
>3i1n_R (R:) 50S ribosomal protein L21; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_R 2aw4_R 2awb_R 1vs6_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R 2vhm_R ...
Probab=100.00 E-value=2.9e-41 Score=250.70 Aligned_cols=103 Identities=42% Similarity=0.700 Sum_probs=101.9
Q ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC
Q ss_conf 96799999888897699899982446789972130421453068851226743378679999996345673899996388
Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR 80 (103)
Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR 80 (103)
|||||++||+||||++||.|.+|++++++||.++|++|||+++++++.+|+|+|++|+|+|+|++|.+++|+++||||||
T Consensus 1 myAIi~~ggkQykV~~Gd~i~v~~l~~~~Gd~i~l~~Vl~v~~~~~~~iG~P~l~~~~V~a~V~~~~k~~Ki~v~K~krr 80 (103)
T 3i1n_R 1 MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRR 80 (103)
T ss_dssp CEEEECCSSSCCEEETTCCEEESCCCSCTTCEEEECCEEEEESSSCEECSSSSCTTCBEEEEEEEEEECCCEEEEEEETT
T ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEECCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCC
T ss_conf 98999979999999389999996467788870882550480279817855975456389999953047762899996386
Q ss_pred CCCEEECCCCCCCEEEEEEEEEC
Q ss_conf 87166427457600999967619
Q gi|254780646|r 81 QNYRRTHGHRQEMTVVRITSIVT 103 (103)
Q Consensus 81 K~yrr~~GhRq~~T~ikI~~I~s 103 (103)
|+|+|++||||+||+|+|++|.+
T Consensus 81 K~~~R~~GhRq~~T~irI~~I~a 103 (103)
T 3i1n_R 81 KHYRKQQGHRQWFTDVKITGISA 103 (103)
T ss_dssp TTEEEEEEECCEEEEECCCCCBC
T ss_pred CCCCCCCCCCCCEEEEEEEEEEC
T ss_conf 76334685358717999988869