HHsearch alignment of GI: 254780647 and MMDB domain: 2ba0_A_1-53

>2ba0_A (A:1-53) Archeal exosome RNA binding protein RRP4; RNAse PH, RNA degradation, exoribonuclease, S1domain, KH domain, archaeal; 2.70A {Archaeoglobus fulgidus}

Probab=91.30  E-value=0.18  Score=28.86  Aligned_cols=49  Identities=20%  Similarity=0.300  Sum_probs=39.7

Q ss_pred             CEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECCCC
Q ss_conf             19537968997238889377660756867563522568998763688832899761542
Q gi|254780647|r   29 QSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYVSVIPKIE   87 (90)
Q Consensus        29 q~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V~V~P~~~   87 (90)
                      +.|.||.+|..+   .|.||.++.. .|..|+|.+-|.|....      +.|+|.|...
T Consensus         3 ~iV~PGd~i~~~---~~~~G~Gty~-~~~~i~ssv~G~ve~~n------klv~V~Pl~g   51 (53)
T 2ba0_A            3 KIVLPGDLLSTN---PRAAGYGTYV-EGGKVYAKIIGLFDQTE------THVRVIPLKG   51 (53)
T ss_dssp             CEECTTCEEESC---TTSBCTTEEE-ETTEEEECSSEEEEECS------SCEEEEECSS
T ss_pred             EEEECCCCCCCC---CCCCCCCEEE-ECCEEEEEEEEEEEEEC------CEEEEECCCC
T ss_conf             399398790669---8255897596-09999999868899969------9899944776