HHsearch alignment of GI: 254780647 and MMDB domain: 3bbo_X_

>3bbo_X (X:) Ribosomal protein L27; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}
Probab=99.78  E-value=2.8e-21  Score=137.97  Aligned_cols=86  Identities=57%  Similarity=0.888  Sum_probs=78.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEE
Q ss_conf             96014567606789887425324542781953796899723888937766075686756352256899876368883289
Q gi|254780647|r    1 MAHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYV   80 (90)
Q Consensus         1 mA~KK~gGStkNgrdS~~krLGvK~~~Gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V   80 (90)
                      +|.++++|+++|+++|.|++|++|+++||+|.+|+||+||++++|+||.++.++||++|+|.++|+|+|.+. .++++++
T Consensus        58 ~~~~~~~g~~~~~~~~~g~~l~ik~~~g~~V~~GdIlakq~~~r~~elfear~pkd~aiiA~i~G~V~~~~~-~~~~~~i  136 (198)
T 3bbo_X           58 SAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSLIDGLVKFEKF-GPDRKKI  136 (198)
T ss_dssp             -CCCCSSCCCCCCCCCCCCCCSCSSSBCCSSCSCCSSSSCCCCSSCCCCSSSSCCCCCSBCCSCCCCCSSSS-CCCCSCC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEEECCCCEECCCCCCCCCCCCEEECCCEEEEEEEC-CCCCEEE
T ss_conf             010357667889999986526147459968606808998326715078770388898268705779999985-8998899


Q ss_pred             EEECCCC
Q ss_conf             9761542
Q gi|254780647|r   81 SVIPKIE   87 (90)
Q Consensus        81 ~V~P~~~   87 (90)
                      .|++...
T Consensus       137 ~v~~~~~  143 (198)
T 3bbo_X          137 SVYPREI  143 (198)
T ss_dssp             CSSCCCC
T ss_pred             EEEECCC
T ss_conf             9987863