HHsearch results for GI: 254780647 and protein with PDBid: 1v8q_A
>1v8q_A TT0826; structural genomics, proteomics, riken structural genomics/proteomics initiative, RSGI, translation; 2.80A {Thermus thermophilus} SCOP: b.84.4.1 PDB: 2hgj_Z 2hgq_Z 2hgu_Z 2j01_0 2j03_0 2jl6_0 2jl8_0 2wdi_0 2wdj_0 2wdl_0 2wdn_0 2wh2_0 2wh4_0 2wrj_0 2wrl_0 2wro_0 2wrr_0 2x9s_0 2x9u_0 3fin_0 ...
Probab=100.00 E-value=1.3e-44 Score=265.72 Aligned_cols=85 Identities=58% Similarity=0.913 Sum_probs=81.9
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEE
Q ss_conf 96014567606789887425324542781953796899723888937766075686756352256899876368883289
Q gi|254780647|r 1 MAHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYV 80 (90)
Q Consensus 1 mA~KK~gGStkNgrdS~~krLGvK~~~Gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V 80 (90)
|||||++|||+|||||+|||||||+|+||+|.||+||||||||+||||+||+||+||||||+++|+|+|+++ .++|+||
T Consensus 1 MA~KK~~GStkNgrdS~~krLGvK~~ggq~V~aG~IivRQRGtk~hPG~NVg~GkD~TLfAl~~G~V~f~~~-~~~r~~V 79 (85)
T 1v8q_A 1 MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDR-GRLGRYV 79 (85)
T ss_dssp -------------------CCEECSCTTCEECTTCEEEECSSCSSEECTTEEECTTCCEEESSSEEEEEEEC-GGGCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCEEEEECCCEEECCCCEEECCCCEEEEECCEEEEEEEC-CCCCEEE
T ss_conf 985346677788988988606778719989768858999277728188885687788098823579998593-8998799
Q ss_pred EEECCC
Q ss_conf 976154
Q gi|254780647|r 81 SVIPKI 86 (90)
Q Consensus 81 ~V~P~~ 86 (90)
||+|.+
T Consensus 80 ~V~P~a 85 (85)
T 1v8q_A 80 HVRPLA 85 (85)
T ss_dssp EEEECC
T ss_pred EEEECC
T ss_conf 999689