HHsearch results for GI: 254780647 and protein with PDBid: 2qam_W
>2qam_W 50S ribosomal protein L27; RNA-protein complex, ribosome; HET: NMY; 3.21A {Escherichia coli} SCOP: b.84.4.1 PDB: 1p85_U 1p86_U 2awb_W 2gya_U 2gyc_U 2aw4_W 2i2v_W 2j28_W 2i2t_W* 2qao_W* 2qba_W* 2qbc_W* 2qbe_W 2qbg_W 2qbi_W* 2qbk_W* 2qov_W 2qox_W 2qoz_W* 2qp1_W* ...
Probab=100.00 E-value=5e-43 Score=256.95 Aligned_cols=84 Identities=57% Similarity=0.974 Sum_probs=82.0
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEEE
Q ss_conf 60145676067898874253245427819537968997238889377660756867563522568998763688832899
Q gi|254780647|r 2 AHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYVS 81 (90)
Q Consensus 2 A~KK~gGStkNgrdS~~krLGvK~~~Gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V~ 81 (90)
||||++|||+|+|||+|||||||+|+||+|.||+||||||||+||||+||+||+||||||+++|+|+|+++..++|+||+
T Consensus 1 A~KK~~GStkNgrdS~~krLGvK~~~gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V~ 80 (84)
T 2qam_W 1 AHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFIS 80 (84)
T ss_dssp -----CCCCCCCCCCCCSCSSCSSCCCCTTCCSBCCTTCSSSSCBCTTCCCCCTTCCBCCCSSSCCCCCCCSSSCCCCBC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCEEEEECCCEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCCEEEE
T ss_conf 97556566788988987535668809989768859999267728288880187888288735789998683899999999
Q ss_pred EECC
Q ss_conf 7615
Q gi|254780647|r 82 VIPK 85 (90)
Q Consensus 82 V~P~ 85 (90)
|+|+
T Consensus 81 V~~e 84 (84)
T 2qam_W 81 IEAE 84 (84)
T ss_dssp CCCC
T ss_pred EEEC
T ss_conf 9879