HHSEARCH alignment of GI: 254780647 and SCOP domain: d2ba0a2

Alignment

Probab=94.96  E-value=0.011  Score=33.39  Aligned_cols=48  Identities=21%  Similarity=0.296  Sum_probs=39.5

Q ss_pred             CEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECCC
Q ss_conf             1953796899723888937766075686756352256899876368883289976154
Q gi|254780647|r   29 QSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYVSVIPKI   86 (90)
Q Consensus        29 q~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V~V~P~~   86 (90)
                      +.|.||.+|..  + .|.||.++.. .|..|+|.+-|.|...     + +.|+|+|..
T Consensus         2 ~iV~PGe~i~~--~-~~~~G~Gty~-~~~~i~ss~~G~v~~~-----n-~~i~V~PL~   49 (51)
T d2ba0a2           2 KIVLPGDLLST--N-PRAAGYGTYV-EGGKVYAKIIGLFDQT-----E-THVRVIPLK   49 (51)
T ss_dssp             CEECTTCEEES--C-TTSBCTTEEE-ETTEEEECSSEEEEEC-----S-SCEEEEECS
T ss_pred             CEECCCCEEEC--C-CEECCCCCEE-ECCEEEEEEEEEEEEE-----C-CEEEEEECC
T ss_conf             79859869201--9-8147987498-7999999998999997-----9-999999686

SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Ribosomal L27 protein-like
family: ECR1 N-terminal domain-like
domain: Exosome complex RNA-binding protein 1, ECR1
species: Archaeoglobus fulgidus [TaxId: 2234]